Cucsa.259660 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACCCCTTCATTTGTTTGATATCTGCGGCCGCCACTGCTACACTCTTGAACATGAAGGTTCGGCCCTTAAATTTCTCTTCTTCTCCACTCTTTTCTCTACTTCTACTTCTTTACTAACTTTGACTTTTCGTGTTTCCAGTTTAATATCGCCAATCCGACTACTGGTTGCCAGAAGAAGCTCGAAATCGACGATGATCAGAAACTGTTAGATTTCAAATTCTCTTATTCTTTAATTTGTTGTCAAAGTGACGAACGGTGGTGCATTAATTGTGGATGAGCTTTTTGTCCATCTTTAGTCGAATGTTCATATTGTTACAATAACATAATTATATGGACATGGGGTTGGTCTAATTGAATATTGAAAAGCATATTTTTAATTCAAACACTGTGATTCGAGTTGCATAATACTACAGTAGATAAATGGACCCATCTTGATCAGTAGAGTAGTGTTGAAATCGTTTATTCGATATGTTTGCCGTTTAAATTTTGTAGTTACCGTTCAGCCTTGCTTTGTGGGATTTCACTAAGGCCATGTTTGGTATGGATGTTTTATATGAATTAGATTCCCCCTGCTTGAACTGAATTGTTTTTTTAAAAATGTTTTTGGGCTGAACAGTCCGATTCGTGTAAATTCTGGAAACATTTTCCAGTAAATTCAAAATTTAAATTTTAAATGCATATTAATATTAAAAAAAAACAATCGTAGTATTTCATATTATAAACTCAATTCATTTATGTTAAATTAAAATTTGTATTATAAATGATAGATATTACAAGGTTTTCAAAATCTACATCAAATTTTGGACATTGTAAAGTTTTAGTATTTAAAAAAAATGGAATTTGGCTAAGAATTCAAATCTTTACCACAATTTAGGAAAATGGATAACTAAATATCAAATGATTATATGAAATGTTGCTTAGCTGTCTCTTCTTGTTTGTTTTGTATGTTTTCCATCATTTTAAACCTGGTATAAATTTCATCATGTACTAAAACTATCCTTTTGTCATTGTTCAGCCGTGCTTTTTTTGACAAGAGGATCTCCCAGGAGGTCGCTGGAGATTCCCTTGGAGAGGTATGTGTGTGGTCTTCTGTCGCCCTATCCAATAAATGAGATCTTTGTTTCTAGTTGCTGTCTCCGAGTTTACTGATTTAGGATTTTCTCTTACACAGGAATTCAAGGGCTATGTTTTTAAGATTATGGGAGGTTGTGACAAGCAGGGTTTCCCAATGAAACAGGGAGTTTTGACCCCTGGTCGTGTCCGTCTCTTGCTACACAGAGGTTTGTGGGGCTGTTTATACTAGTGAATGAATAGTTAGCCCATTTGATCATGTTTGCGGCTTTTATTTATATCATCATTTTCTTTCATTTATTTCAATAATGTTTAGTTTCTTACCAAAAACATATTTGTGGCTTTTGTTATTTGTTTTCATTAGATTATTGCACTGTCCAAGATTACAATGCAACCCTCTAGTATATTATTACTTTCTTGTCTCTTATTTGGTGTAAATTGATCTCCTAGGTGTTTTTTTTTTAATCCATTGGGCAGAATCTTTTGTAATTTCATCCAAGTTTATTGCACTATTATAATTAATGCAAACATGTATGCTGATTTCTGTGGCCAGGTACTCCTTGTTTCCGCGGTTATGGTAGGCGCAATGGAGAACGCAGAAGGAAGTCTGTGCGTGGATGCATTGTGAGCCAGGACCTTTCTGTTCTGAATCTGGTTATAGTGAAGAAGGGAGATAATGATCTTCCTGGCTTGACAGACACTGAGAAACCAAGAATGAGGGGTCCCAAGAGGGCTTCCAAGATTCGCAAACTTTTCAATTTGTCAAAGGAGGATGATGTTCGAAAGTATGTTAACACATACCGTAGATCATTCACCACAAAATCTGGTATGGTTTGTGATTCCTTTGTGGTTGAACTTGTGATAAAAAAATAAGGGATTATTTTGATTGACATTCTAAATGCTATTCAAAGACACTCAAAAACATTTTTGCCAGTGCTTGGAAAATCAATCCGAAAACACTTTTTTTTTTCACTTTGAAATACTTTTTTCAACTGTGCCTTATAGATGGTGCAAGTACTAGTTGAGGTCTAATACTTTTCTCAAGGATTATTGGATGGATGTATTCCTGCTTTGTATTGTCCTAACGTCTCTAGGTGAATGAACCTTCATTTGACATTGGATTACATTGTTGTTCAATATTGCTCCTGGTCGAACATCTAAGTGGATCGTGCTTTGTAACTGAACTAATCTCCTAGTTTAATTTTAGCTACCATAGAATTTTATTTTATGCAAATTGTTTTTTCAGTTCCATATATTATGATTCGTTTATGATGATTTTTATCTGATTGGCAGGCAAAAAGGTTAGCAAAGCTCCCAAGATTCAGAGGTTGGTTACCCCACTGACCCTGCAGAGGAAGCGAGGAAGAATTGCTGAGAAAAAGAAGAGAATTGCGAAGGCCAAGTCTGAGGCTGCTGAGTATCAGAAGCTCCTGGCCTCTAGGTTGAAGGAGCAAAGAGAACGTCGTAGTGAGAGTTTAGCAAAGAAGAGATCCAGACTCTCTGCTGCTTCAAAGCCGTCTATCGCTGCTGCTTAGTTTTGTTCCCATTGTTGGTGTCAGTGTTCTATTATCTTTATATTTGCCATATTGTTTTTCTTTCAAGAGTGTACTTTTCGCGGCCGCTTAATATGAGATCTGGAACGTTTCGGTAGTTTTGATGTCTGTTAGTCCACATTTTCTTCTTCCCTTTGTTTATGGATTCATGCAAATTGTAAATTGTTGTTTCTCACCAAAGTAGAGATTAGAATCTCCATTTCACTTGTATTCACTTATTGACAGTTATTTATACATATACTTGATTGAGGGA ACCCCTTCATTTGTTTGATATCTGCGGCCGCCACTGCTACACTCTTGAACATGAAGTTTAATATCGCCAATCCGACTACTGGTTGCCAGAAGAAGCTCGAAATCGACGATGATCAGAAACTCCGTGCTTTTTTTGACAAGAGGATCTCCCAGGAGGTCGCTGGAGATTCCCTTGGAGAGGAATTCAAGGGCTATGTTTTTAAGATTATGGGAGGTTGTGACAAGCAGGGTTTCCCAATGAAACAGGGAGTTTTGACCCCTGGTCGTGTCCGTCTCTTGCTACACAGAGGTACTCCTTGTTTCCGCGGTTATGGTAGGCGCAATGGAGAACGCAGAAGGAAGTCTGTGCGTGGATGCATTGTGAGCCAGGACCTTTCTGTTCTGAATCTGGTTATAGTGAAGAAGGGAGATAATGATCTTCCTGGCTTGACAGACACTGAGAAACCAAGAATGAGGGGTCCCAAGAGGGCTTCCAAGATTCGCAAACTTTTCAATTTGTCAAAGGAGGATGATGTTCGAAAGTATGTTAACACATACCGTAGATCATTCACCACAAAATCTGGCAAAAAGGTTAGCAAAGCTCCCAAGATTCAGAGGTTGGTTACCCCACTGACCCTGCAGAGGAAGCGAGGAAGAATTGCTGAGAAAAAGAAGAGAATTGCGAAGGCCAAGTCTGAGGCTGCTGAGTATCAGAAGCTCCTGGCCTCTAGGTTGAAGGAGCAAAGAGAACGTCGTAGTGAGAGTTTAGCAAAGAAGAGATCCAGACTCTCTGCTGCTTCAAAGCCGTCTATCGCTGCTGCTTAGTTTTGTTCCCATTGTTGGTGTCAGTGTTCTATTATCTTTATATTTGCCATATTGTTTTTCTTTCAAGAGTGTACTTTTCGCGGCCGCTTAATATGAGATCTGGAACGTTTCGGTAGTTTTGATGTCTGTTAGTCCACATTTTCTTCTTCCCTTTGTTTATGGATTCATGCAAATTGTAAATTGTTGTTTCTCACCAAAGTAGAGATTAGAATCTCCATTTCACTTGTATTCACTTATTGACAGTTATTTATACATATACTTGATTGAGGGA ATGAAGTTTAATATCGCCAATCCGACTACTGGTTGCCAGAAGAAGCTCGAAATCGACGATGATCAGAAACTCCGTGCTTTTTTTGACAAGAGGATCTCCCAGGAGGTCGCTGGAGATTCCCTTGGAGAGGAATTCAAGGGCTATGTTTTTAAGATTATGGGAGGTTGTGACAAGCAGGGTTTCCCAATGAAACAGGGAGTTTTGACCCCTGGTCGTGTCCGTCTCTTGCTACACAGAGGTACTCCTTGTTTCCGCGGTTATGGTAGGCGCAATGGAGAACGCAGAAGGAAGTCTGTGCGTGGATGCATTGTGAGCCAGGACCTTTCTGTTCTGAATCTGGTTATAGTGAAGAAGGGAGATAATGATCTTCCTGGCTTGACAGACACTGAGAAACCAAGAATGAGGGGTCCCAAGAGGGCTTCCAAGATTCGCAAACTTTTCAATTTGTCAAAGGAGGATGATGTTCGAAAGTATGTTAACACATACCGTAGATCATTCACCACAAAATCTGGCAAAAAGGTTAGCAAAGCTCCCAAGATTCAGAGGTTGGTTACCCCACTGACCCTGCAGAGGAAGCGAGGAAGAATTGCTGAGAAAAAGAAGAGAATTGCGAAGGCCAAGTCTGAGGCTGCTGAGTATCAGAAGCTCCTGGCCTCTAGGTTGAAGGAGCAAAGAGAACGTCGTAGTGAGAGTTTAGCAAAGAAGAGATCCAGACTCTCTGCTGCTTCAAAGCCGTCTATCGCTGCTGCTTAG MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVAGDSLGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSIAAA*
BLAST of Cucsa.259660 vs. Swiss-Prot
Match: RS6_ASPOF (40S ribosomal protein S6 OS=Asparagus officinalis GN=rps6 PE=2 SV=1) HSP 1 Score: 456.4 bits (1173), Expect = 2.0e-127 Identity = 228/243 (93.83%), Postives = 236/243 (97.12%), Query Frame = 1
BLAST of Cucsa.259660 vs. Swiss-Prot
Match: RS62_ARATH (40S ribosomal protein S6-2 OS=Arabidopsis thaliana GN=RPS6B PE=1 SV=3) HSP 1 Score: 449.1 bits (1154), Expect = 3.1e-125 Identity = 224/249 (89.96%), Postives = 237/249 (95.18%), Query Frame = 1
BLAST of Cucsa.259660 vs. Swiss-Prot
Match: RS61_ARATH (40S ribosomal protein S6-1 OS=Arabidopsis thaliana GN=RPS6A PE=1 SV=2) HSP 1 Score: 448.0 bits (1151), Expect = 6.9e-125 Identity = 224/250 (89.60%), Postives = 238/250 (95.20%), Query Frame = 1
BLAST of Cucsa.259660 vs. Swiss-Prot
Match: RS6_TOBAC (40S ribosomal protein S6 (Fragment) OS=Nicotiana tabacum GN=RPS6 PE=2 SV=2) HSP 1 Score: 335.1 bits (858), Expect = 6.6e-91 Identity = 178/204 (87.25%), Postives = 185/204 (90.69%), Query Frame = 1
BLAST of Cucsa.259660 vs. Swiss-Prot
Match: RS6_MOUSE (40S ribosomal protein S6 OS=Mus musculus GN=Rps6 PE=1 SV=1) HSP 1 Score: 303.5 bits (776), Expect = 2.1e-81 Identity = 160/241 (66.39%), Postives = 190/241 (78.84%), Query Frame = 1
BLAST of Cucsa.259660 vs. TrEMBL
Match: A0A0A0L5R5_CUCSA (40S ribosomal protein S6 OS=Cucumis sativus GN=Csa_3G118140 PE=3 SV=1) HSP 1 Score: 491.9 bits (1265), Expect = 4.7e-136 Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 1
BLAST of Cucsa.259660 vs. TrEMBL
Match: A0A0A0LL90_CUCSA (40S ribosomal protein S6 OS=Cucumis sativus GN=Csa_2G369060 PE=3 SV=1) HSP 1 Score: 485.3 bits (1248), Expect = 4.4e-134 Identity = 245/249 (98.39%), Postives = 249/249 (100.00%), Query Frame = 1
BLAST of Cucsa.259660 vs. TrEMBL
Match: A0A0B0MIQ0_GOSAR (40S ribosomal protein S6 OS=Gossypium arboreum GN=F383_17949 PE=3 SV=1) HSP 1 Score: 481.1 bits (1237), Expect = 8.2e-133 Identity = 241/249 (96.79%), Postives = 248/249 (99.60%), Query Frame = 1
BLAST of Cucsa.259660 vs. TrEMBL
Match: A0A0D2QN24_GOSRA (40S ribosomal protein S6 OS=Gossypium raimondii GN=B456_003G041100 PE=3 SV=1) HSP 1 Score: 481.1 bits (1237), Expect = 8.2e-133 Identity = 241/249 (96.79%), Postives = 248/249 (99.60%), Query Frame = 1
BLAST of Cucsa.259660 vs. TrEMBL
Match: A0A0D2T2W0_GOSRA (40S ribosomal protein S6 OS=Gossypium raimondii GN=B456_008G090300 PE=3 SV=1) HSP 1 Score: 481.1 bits (1237), Expect = 8.2e-133 Identity = 241/249 (96.79%), Postives = 248/249 (99.60%), Query Frame = 1
BLAST of Cucsa.259660 vs. TAIR10
Match: AT5G10360.1 (AT5G10360.1 Ribosomal protein S6e) HSP 1 Score: 449.1 bits (1154), Expect = 1.8e-126 Identity = 224/249 (89.96%), Postives = 237/249 (95.18%), Query Frame = 1
BLAST of Cucsa.259660 vs. TAIR10
Match: AT4G31700.1 (AT4G31700.1 ribosomal protein S6) HSP 1 Score: 448.0 bits (1151), Expect = 3.9e-126 Identity = 224/250 (89.60%), Postives = 238/250 (95.20%), Query Frame = 1
BLAST of Cucsa.259660 vs. NCBI nr
Match: gi|449431994|ref|XP_004133785.1| (PREDICTED: 40S ribosomal protein S6-like [Cucumis sativus]) HSP 1 Score: 491.9 bits (1265), Expect = 6.7e-136 Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 1
BLAST of Cucsa.259660 vs. NCBI nr
Match: gi|659088196|ref|XP_008444852.1| (PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S6-like [Cucumis melo]) HSP 1 Score: 486.5 bits (1251), Expect = 2.8e-134 Identity = 246/249 (98.80%), Postives = 248/249 (99.60%), Query Frame = 1
BLAST of Cucsa.259660 vs. NCBI nr
Match: gi|659074845|ref|XP_008437828.1| (PREDICTED: 40S ribosomal protein S6-like [Cucumis melo]) HSP 1 Score: 485.7 bits (1249), Expect = 4.8e-134 Identity = 247/250 (98.80%), Postives = 247/250 (98.80%), Query Frame = 1
BLAST of Cucsa.259660 vs. NCBI nr
Match: gi|449469843|ref|XP_004152628.1| (PREDICTED: 40S ribosomal protein S6 [Cucumis sativus]) HSP 1 Score: 485.3 bits (1248), Expect = 6.3e-134 Identity = 245/249 (98.39%), Postives = 249/249 (100.00%), Query Frame = 1
BLAST of Cucsa.259660 vs. NCBI nr
Match: gi|823206980|ref|XP_012437220.1| (PREDICTED: 40S ribosomal protein S6-like isoform X1 [Gossypium raimondii]) HSP 1 Score: 481.1 bits (1237), Expect = 1.2e-132 Identity = 241/249 (96.79%), Postives = 248/249 (99.60%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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