ClCG05G000450 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG05G000450
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	40S ribosomal protein S6
Location	CG_Chr05 : 586220 .. 589120 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTAAGGACGGCACAATAGGGGCAGGTTTTAAACCCCAAAGCTTAAGGCGTAACTCGCTCCTCCGTTGGTTTGTTATCTGCGGCCGCCACACTCCTACAATCTTCAAGATGAAGGTTCAGCCCTTAGATTTCTCTTCTTCTCGACTGTTTTCTCTAGTTTTACTTCTATACTAACTTTGAGTTTTTATGTTTCCAGTTTAATATCGCGAATCCGACTACTGGATGCCAGAAGAAGCTCGAAATCGACGATGATCAGAAACTGTTAGCTTTCAAATTCCCTTATGCTTCATTCTGTTGTCTAATTGACGAACGTTTTATTAAATGTGGATGAATTTTTCTGTCCATCTTCAGTCGAATGTTCATACTGTAAACATTACATAATTACATGCGGTTGGTCTAATTGAATGTTGAAAAGTATATCTTGATATGCTTAAATCCTTGATTCCAATACTATCACTTTCTGGAACTAGGTGTTTTGAGATGCATAATAGATAAAATGGGCCCTTTTTGATCGGTAGAGTTGCGTTGAAATCGATTGCTCGATATCCTTGCAGTTTAAATTTTTTAGTTAACGTTCAGCCTTGCTATGGGGGATTTAGCTTAGGGCTGTTTGGTATGGATTCTATTTCATGTTTTCAAACCTACGCATGCCTTAACTGAAATTATTTTTTTGAAAAATGTTTTCCAATTTCGTAATCTGTAAACTCTGAAAACATTTTTCGATGTATCTGATTTTAATTTTGAAATTTAAAAATGTGGATTAATATTAACAAAGATTATAATGTAAATAAATATAGTATTTCATATTATAAACTCAATTCATTTTTGTTAAATTAAATTTATTTTATTATATAATGTAATTATACAATATTACTTGGTGAGACAAACACAATTTTTAAAAATAGAAAACCAAATATCAAATGGTTATTGAACGTGGCTTAGCTATCCCGTTTTGTTTGTTTGTATGTTTTCCATCATTTTTTTACCCGGTTTAAATTTTCATCATGTACTAAACTTATCATTTGTCATTGTTTAGCCGTGCTTTTTTTGACAAGAGGATCTCCCAGGAGGTCAGTGGAGATTCCCTCGGAGAGGTATGTTGGTGCTCTTTTGTCATCCAATCCAATAAGTGGGATTTTAGTTCCTAGTTGCTGTCTCTGAGTTTACTGATTGAGGATTTTCGTTTGCTCAGGAATTCAAGGGCTATGTTTTCAAGATTATGGGAGGTTGTGACAAGCAGGGTTTCCCAATGAAACAGGGAGTTTTGACCCCTGGCCGTGTCCGTCTCTTGCTACACAGAGGTTTGTGGAACTGTTTATACTAGTGAATAGTTAACCCATTTGATCATATTTGTGGCCTTTATTTGGTATTCTATCATTCAAAATAAAGCTTAGTTTTCTTACCAAAAACATATTTGTGGCCTTTGTTATTTGTTTTCATTAGTTTATAGGACTATCTAAGACTACAATGCAACCATCTCGTATATCACTTCCTTATTTCCCTAAGTTGGTGTAAATTGATCTTCCATTTTTGTAACTATAGTTCATCTAATCTTATGAGTTATGACCAATTGGAGAAGCTTCTTTATGTAATCCATTGAACAGGATCTTTTATAATTTCATCTCACCAATGAAATTTTTGTTTCCTATAAAAAAAATTAGTTTATAGCACTATGGTAAGTAATGCAAGCATGTGTTTGATTTCTGTGGTCAGGAACCCCTTGTTTCCGTGGTTATGGTAGGCGTAATGGAGAACGCAGAAGGAAGTCTGTACGTGGATGCATTGTGAGCCCTGACCTTTCTGTTCTGAATCTGGTTATTGTGAAGAAGGGAGATAATGATCTACCTGGCTTGACAGACACTGAGAAACCAAGAATGAGGGGTCCCAAGAGGGCTTCCAAAATTCGCAAACTTTTCAATTTGTCAAAGGATGATGATGTTCGAAAGTATGTTAACACATACCGTAGATCATTCACCACAAAATCTGGTATGGTTTATGAATGCTTTTTATGGTTGTTGAACTTGTCAAACAAATTGAAGGCTTGTTTGGATGGGCATTATGAGTGCTCAAAAACACTTTTTTTTTTTTATGCTCGAAGACATTTTTTTCACTTGAAAACATTTTTGTAAGCATTTAGAAAATCAATCCAAAAACACTTTTTTTTTCACTTAAAAATACTTTTTTCAACTGACTCATAGATGGTGCAATTACCGGTTGAGATCTAATACTTTTCTCAAGTTGCATGCTCGGATGGATGAATTCTTATAATTACCTATACTTGGTAATTTGTATGGATAGTCCTAATCTTTCTAGATGAACTGAACCTTCATTTGACTTTGGATTGCATTGTTGTTCAATATTGCTCCTGTTTGCACATCTTGATGGATTGTGCTTTGTAACTGGACTAATCTCCTGGTCTCATTTTGGCTATTAATAAAATTTTATTTTATTCGAATTGTTTTTTCAGTTCCATATATTTTGGAATCAAGTTTCTGATGTTTATTTTATTGGCAGGCAAAAAGGTTAGCAAAGCACCCAAGATTCAGAGGTTGGTTACCCCGCTGACCCTGCAAAGGAAGCGAGGAAGAATTGCTGAGAAGAAGAAGAGAATTGCGAAGGCCAAGTCTGAGGCTGCTGAGTATCAGAAGCTCCTGGCCTCTAGGTTGAAGGAGCAAAGAGAACGTCGCAGTGAGAGTTTGGCCAAGAAGAGATCCAGGCTCTCTGCTGCTTCAAAGCCGTCTATTGCTGCTGCTTAGTTCATTCGCATTGTTCAACTCAGTGTTCTATTATCTTTATATTTGTCATCTTGTTTTCCTTTCAAGAGAATATTCTTTTTGCGGCTGCTTATATGAGATCTGGAACGTTTTGGTACTTTTGGTGTCTGTTAGCCCATATTTTCTT

mRNA sequence

ACTAAGGACGGCACAATAGGGGCAGGTTTTAAACCCCAAAGCTTAAGGCGTAACTCGCTCCTCCGTTGGTTTGTTATCTGCGGCCGCCACACTCCTACAATCTTCAAGATGAAGTTTAATATCGCGAATCCGACTACTGGATGCCAGAAGAAGCTCGAAATCGACGATGATCAGAAACTCCGTGCTTTTTTTGACAAGAGGATCTCCCAGGAGGTCAGTGGAGATTCCCTCGGAGAGGAATTCAAGGGCTATGTTTTCAAGATTATGGGAGGTTGTGACAAGCAGGGTTTCCCAATGAAACAGGGAGTTTTGACCCCTGGCCGTGTCCGTCTCTTGCTACACAGAGAACGCAGAAGGAAGTCTGTACGTGGATGCATTGTGAGCCCTGACCTTTCTGTTCTGAATCTGGTTATTGTGAAGAAGGGAGATAATGATCTACCTGGCTTGACAGACACTGAGAAACCAAGAATGAGGGGTCCCAAGAGGGCTTCCAAAATTCGCAAACTTTTCAATTTGTCAAAGGATGATGATGTTCGAAAGTATGTTAACACATACCGCAAAAAGGTTAGCAAAGCACCCAAGATTCAGAGGTTGGTTACCCCGCTGACCCTGCAAAGGAAGCGAGGAAGAATTGCTGAGAAGAAGAAGAGAATTGCGAAGGCCAAGTCTGAGGCTGCTGAGTATCAGAAGCTCCTGGCCTCTAGGTTGAAGGAGCAAAGAGAACGTCGCAGTGAGAGTTTGGCCAAGAAGAGATCCAGGCTCTCTGCTGCTTCAAAGCCGTCTATTGCTGCTGCTTAGTTCATTCGCATTGTTCAACTCAGTGTTCTATTATCTTTATATTTGTCATCTTGTTTTCCTTTCAAGAGAATATTCTTTTTGCGGCTGCTTATATGAGATCTGGAACGTTTTGGTACTTTTGGTGTCTGTTAGCCCATATTTTCTT

Coding sequence (CDS)

ACTAAGGACGGCACAATAGGGGCAGGTTTTAAACCCCAAAGCTTAAGGCGTAACTCGCTCCTCCGTTGGTTTGTTATCTGCGGCCGCCACACTCCTACAATCTTCAAGATGAAGTTTAATATCGCGAATCCGACTACTGGATGCCAGAAGAAGCTCGAAATCGACGATGATCAGAAACTCCGTGCTTTTTTTGACAAGAGGATCTCCCAGGAGGTCAGTGGAGATTCCCTCGGAGAGGAATTCAAGGGCTATGTTTTCAAGATTATGGGAGGTTGTGACAAGCAGGGTTTCCCAATGAAACAGGGAGTTTTGACCCCTGGCCGTGTCCGTCTCTTGCTACACAGAGAACGCAGAAGGAAGTCTGTACGTGGATGCATTGTGAGCCCTGACCTTTCTGTTCTGAATCTGGTTATTGTGAAGAAGGGAGATAATGATCTACCTGGCTTGACAGACACTGAGAAACCAAGAATGAGGGGTCCCAAGAGGGCTTCCAAAATTCGCAAACTTTTCAATTTGTCAAAGGATGATGATGTTCGAAAGTATGTTAACACATACCGCAAAAAGGTTAGCAAAGCACCCAAGATTCAGAGGTTGGTTACCCCGCTGACCCTGCAAAGGAAGCGAGGAAGAATTGCTGAGAAGAAGAAGAGAATTGCGAAGGCCAAGTCTGAGGCTGCTGAGTATCAGAAGCTCCTGGCCTCTAGGTTGAAGGAGCAAAGAGAACGTCGCAGTGAGAGTTTGGCCAAGAAGAGATCCAGGCTCTCTGCTGCTTCAAAGCCGTCTATTGCTGCTGCTTAG

Protein sequence

TKDGTIGAGFKPQSLRRNSLLRWFVICGRHTPTIFKMKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRERRRKSVRGCIVSPDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSIAAA

Homology

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BLAST of ClCG05G000450 vs. Swiss-Prot
Match: RS6_ASPOF (40S ribosomal protein S6 OS=Asparagus officinalis GN=rps6 PE=2 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 6.0e-111
Identity = 211/243 (86.83%), Postives = 216/243 (88.89%), Query Frame = 1


Query: 37  MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 96
           MKFNIANPTTGCQKKLEIDDDQKLRAF+DKRISQEVSGD+LGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 97  FPMKQGVLTPGRVRLLLHR-------------ERRRKSVRGCIVSPDLSVLNLVIVKKGD 156
           FPMKQGVLTPGRVRLLLHR             ERRRKSVRGCIVSPDLSVLNLVIVKKG+
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120

Query: 157 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYR--------KKVSKAPKI 216
           NDLPGLTD EKPRMRGPKRASKIRKLFNLSK+DDVRKYVNTYR        K  SKAPKI
Sbjct: 121 NDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTNKKGKTCSKAPKI 180

Query: 217 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 259
           QRLVTPLTLQRKR RIAEKKKR+AKAKSEAAEYQKLLASRLKEQR+RRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRARIAEKKKRVAKAKSEAAEYQKLLASRLKEQRDRRSESLAKKRSRLS 240

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BLAST of ClCG05G000450 vs. Swiss-Prot
Match: RS62_ARATH (40S ribosomal protein S6-2 OS=Arabidopsis thaliana GN=RPS6B PE=1 SV=3)

HSP 1 Score: 398.7 bits (1023), Expect = 5.1e-110
Identity = 209/249 (83.94%), Postives = 218/249 (87.55%), Query Frame = 1


Query: 37  MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 96
           MKFN+ANPTTGCQKKLEIDDDQKLRAFFDKR+SQEVSGD+LGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDQKLRAFFDKRLSQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 97  FPMKQGVLTPGRVRLLLHR-------------ERRRKSVRGCIVSPDLSVLNLVIVKKGD 156
           FPMKQGVLTPGRVRLLLHR             ERRRKSVRGCIVSPDLSVLNLVIVKKG 
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGV 120

Query: 157 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYR--------KKVSKAPKI 216
           +DLPGLTDTEKPRMRGPKRASKIRKLFNL K+DDVRKYVNTYR        KKVSKAPKI
Sbjct: 121 SDLPGLTDTEKPRMRGPKRASKIRKLFNLGKEDDVRKYVNTYRRTFTNKKGKKVSKAPKI 180

Query: 217 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 265
           QRLVTPLTLQRKR RIA+KKKRIAKA S+AA+YQKLLASRLKEQR+RRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRARIADKKKRIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSRLS 240

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BLAST of ClCG05G000450 vs. Swiss-Prot
Match: RS61_ARATH (40S ribosomal protein S6-1 OS=Arabidopsis thaliana GN=RPS6A PE=1 SV=2)

HSP 1 Score: 398.3 bits (1022), Expect = 6.7e-110
Identity = 209/250 (83.60%), Postives = 220/250 (88.00%), Query Frame = 1


Query: 37  MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 96
           MKFN+ANPTTGCQKKLEIDDDQKLRAF+DKRISQEVSGD+LGEEFKGYVFKI GGCDKQG
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIKGGCDKQG 60

Query: 97  FPMKQGVLTPGRVRLLLHR-------------ERRRKSVRGCIVSPDLSVLNLVIVKKGD 156
           FPMKQGVLTPGRVRLLLHR             ERRRKSVRGCIVSPDLSVLNLVIVKKG+
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120

Query: 157 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRKK--------VSKAPKI 216
           NDLPGLTDTEKPRMRGPKRASKIRKLFNL K+DDVR YVNTYR+K        VSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLKKEDDVRTYVNTYRRKFTNKKGKEVSKAPKI 180

Query: 217 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRL- 265
           QRLVTPLTLQRKR RIA+KKK+IAKA S+AA+YQKLLASRLKEQR+RRSESLAKKRSRL 
Sbjct: 181 QRLVTPLTLQRKRARIADKKKKIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSRLS 240

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BLAST of ClCG05G000450 vs. Swiss-Prot
Match: RS6_TOBAC (40S ribosomal protein S6 (Fragment) OS=Nicotiana tabacum GN=RPS6 PE=2 SV=2)

HSP 1 Score: 293.9 bits (751), Expect = 1.8e-78
Identity = 161/201 (80.10%), Postives = 168/201 (83.58%), Query Frame = 1


Query: 82  KGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHR-------------ERRRKSVRGCIVS 141
           KGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLL+R             ERRRKSVRGCIVS
Sbjct: 1   KGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLYRGTPCFRGYGRRNGERRRKSVRGCIVS 60

Query: 142 PDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRK- 201
           PDLSVLNLVIVKKG+NDLPGLTDTEKPRMRGP+   +   L+   K+DDVRKYVNT  + 
Sbjct: 61  PDLSVLNLVIVKKGENDLPGLTDTEKPRMRGPREPQRSEALY--FKEDDVRKYVNTTAEF 120

Query: 202 ----KVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERR 261
               K SKAPKIQRLVTPLTLQRKR RIA+KKKRIAKAKSEAAEYQKLLASRLKEQRE+R
Sbjct: 121 TTKWKGSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKSEAAEYQKLLASRLKEQREKR 180

Query: 262 SESLAKKRSRLSAASKPSIAA 265
           SESLAKKRSRLSAASKPSIAA
Sbjct: 181 SESLAKKRSRLSAASKPSIAA 199

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BLAST of ClCG05G000450 vs. Swiss-Prot
Match: RS6_RAT (40S ribosomal protein S6 OS=Rattus norvegicus GN=Rps6 PE=1 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 1.2e-74
Identity = 151/237 (63.71%), Postives = 179/237 (75.53%), Query Frame = 1


Query: 37  MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 96
           MK NI+ P TGCQK +E+DD++KLR F++KR++ EV+ D+LGEE+KGYV +I GG DKQG
Sbjct: 1   MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60

Query: 97  FPMKQGVLTPGRVRLLLHR-----------ERRRKSVRGCIVSPDLSVLNLVIVKKGDND 156
           FPMKQGVLT GRVRLLL +           ER+RKSVRGCIV  +LSVLNLVIVKKG+ D
Sbjct: 61  FPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKD 120

Query: 157 LPGLTDTEKPRMRGPKRASKIRKLFNLSKDDDVRKYV------NTYRKKVSKAPKIQRLV 216
           +PGLTDT  PR  GPKRAS+IRKLFNLSK+DDVR+YV         +K  +KAPKIQRLV
Sbjct: 121 IPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPLNKEGKKPRTKAPKIQRLV 180

Query: 217 TPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLSA 257
           TP  LQ KR RIA KK+R  K K EAAEY KLLA R+KE +E+R E +AK+R RLS+
Sbjct: 181 TPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQIAKRR-RLSS 236

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BLAST of ClCG05G000450 vs. TrEMBL
Match: A0A0A0L5R5_CUCSA (40S ribosomal protein S6 OS=Cucumis sativus GN=Csa_3G118140 PE=3 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 7.4e-116
Identity = 226/250 (90.40%), Postives = 228/250 (91.20%), Query Frame = 1


Query: 37  MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 96
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEV+GDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVAGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 97  FPMKQGVLTPGRVRLLLHR-------------ERRRKSVRGCIVSPDLSVLNLVIVKKGD 156
           FPMKQGVLTPGRVRLLLHR             ERRRKSVRGCIVS DLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 157 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYR--------KKVSKAPKI 216
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSK+DDVRKYVNTYR        KKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180

Query: 217 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 266
           QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240

[Close]

BLAST of ClCG05G000450 vs. TrEMBL
Match: A0A0A0LL90_CUCSA (40S ribosomal protein S6 OS=Cucumis sativus GN=Csa_2G369060 PE=3 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 6.3e-115
Identity = 224/249 (89.96%), Postives = 227/249 (91.16%), Query Frame = 1


Query: 37  MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 96
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 97  FPMKQGVLTPGRVRLLLHR-------------ERRRKSVRGCIVSPDLSVLNLVIVKKGD 156
           FPMKQGVLTPGRVRLLLHR             ERRRKSVRGCIVS DLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 157 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYR--------KKVSKAPKI 216
           NDLPGLTD+EKPRMRGPKRASKIRKLFNLSK+DDVRKYVNTYR        KKVSKAPKI
Sbjct: 121 NDLPGLTDSEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKVSKAPKI 180

Query: 217 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 265
           QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLL+SRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLSSRLKEQRERRSESLAKKRSRLS 240

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BLAST of ClCG05G000450 vs. TrEMBL
Match: K4DHA3_SOLLC (40S ribosomal protein S6 OS=Solanum lycopersicum PE=3 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 5.3e-114
Identity = 221/249 (88.76%), Postives = 226/249 (90.76%), Query Frame = 1


Query: 37  MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 96
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGD+LGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 97  FPMKQGVLTPGRVRLLLHR-------------ERRRKSVRGCIVSPDLSVLNLVIVKKGD 156
           FPMKQGVLTPGRVRLLLHR             ERRRKSVRGCIVSPDLSVLNLVIVKKG+
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120

Query: 157 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYR--------KKVSKAPKI 216
           NDLPGLTDTEKPRMRGPKRASKIRKLFNL KDDDVRKYVNTYR        K+VSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLGKDDDVRKYVNTYRRTFTNKKGKEVSKAPKI 180

Query: 217 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 265
           QRLVTPLTLQRKR RIA+KKKRIAKAKSEAA+YQKLLASRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRARIADKKKRIAKAKSEAADYQKLLASRLKEQRERRSESLAKKRSRLS 240

[Close]

BLAST of ClCG05G000450 vs. TrEMBL
Match: A0A0D2T2W0_GOSRA (40S ribosomal protein S6 OS=Gossypium raimondii GN=B456_008G090300 PE=3 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 5.3e-114
Identity = 221/249 (88.76%), Postives = 226/249 (90.76%), Query Frame = 1


Query: 37  MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 96
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGD+LGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 97  FPMKQGVLTPGRVRLLLHR-------------ERRRKSVRGCIVSPDLSVLNLVIVKKGD 156
           FPMKQGVLTPGRVRLLLHR             ERRRKSVRGCIVS DLSVLNLVIVKKG+
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGE 120

Query: 157 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYR--------KKVSKAPKI 216
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSK+DDVRKYVNTYR        KKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKNGKKVSKAPKI 180

Query: 217 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 265
           QRLVTPLTLQRKRGRIAEKKKR+AKAK+EAAEYQKLLA RLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRVAKAKAEAAEYQKLLAQRLKEQRERRSESLAKKRSRLS 240

[Close]

BLAST of ClCG05G000450 vs. TrEMBL
Match: A0A0B0PKG8_GOSAR (40S ribosomal protein S6 OS=Gossypium arboreum GN=F383_09205 PE=3 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 6.9e-114
Identity = 220/249 (88.35%), Postives = 226/249 (90.76%), Query Frame = 1


Query: 37  MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 96
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGD+LGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 97  FPMKQGVLTPGRVRLLLHR-------------ERRRKSVRGCIVSPDLSVLNLVIVKKGD 156
           FPMKQGVLTPGRVRLLLHR             ERRRKSVRGCIVS DLSVLNL+IVKKG+
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGIPCFCGYGRRNGERRRKSVRGCIVSQDLSVLNLIIVKKGE 120

Query: 157 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYR--------KKVSKAPKI 216
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSK+DDVRKYVNTYR        KKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKNGKKVSKAPKI 180

Query: 217 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 265
           QRLVTPLTLQRKRGRIAEKKKR+AKAK+EAAEYQKLLA RLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRVAKAKAEAAEYQKLLAQRLKEQRERRSESLAKKRSRLS 240

[Close]

BLAST of ClCG05G000450 vs. TAIR10
Match: AT5G10360.1 (AT5G10360.1 Ribosomal protein S6e)

HSP 1 Score: 398.7 bits (1023), Expect = 2.9e-111
Identity = 209/249 (83.94%), Postives = 218/249 (87.55%), Query Frame = 1


Query: 37  MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 96
           MKFN+ANPTTGCQKKLEIDDDQKLRAFFDKR+SQEVSGD+LGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDQKLRAFFDKRLSQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 97  FPMKQGVLTPGRVRLLLHR-------------ERRRKSVRGCIVSPDLSVLNLVIVKKGD 156
           FPMKQGVLTPGRVRLLLHR             ERRRKSVRGCIVSPDLSVLNLVIVKKG 
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGV 120

Query: 157 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYR--------KKVSKAPKI 216
           +DLPGLTDTEKPRMRGPKRASKIRKLFNL K+DDVRKYVNTYR        KKVSKAPKI
Sbjct: 121 SDLPGLTDTEKPRMRGPKRASKIRKLFNLGKEDDVRKYVNTYRRTFTNKKGKKVSKAPKI 180

Query: 217 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 265
           QRLVTPLTLQRKR RIA+KKKRIAKA S+AA+YQKLLASRLKEQR+RRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRARIADKKKRIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSRLS 240

[Close]

BLAST of ClCG05G000450 vs. TAIR10
Match: AT4G31700.1 (AT4G31700.1 ribosomal protein S6)

HSP 1 Score: 398.3 bits (1022), Expect = 3.7e-111
Identity = 209/250 (83.60%), Postives = 220/250 (88.00%), Query Frame = 1


Query: 37  MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 96
           MKFN+ANPTTGCQKKLEIDDDQKLRAF+DKRISQEVSGD+LGEEFKGYVFKI GGCDKQG
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIKGGCDKQG 60

Query: 97  FPMKQGVLTPGRVRLLLHR-------------ERRRKSVRGCIVSPDLSVLNLVIVKKGD 156
           FPMKQGVLTPGRVRLLLHR             ERRRKSVRGCIVSPDLSVLNLVIVKKG+
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120

Query: 157 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRKK--------VSKAPKI 216
           NDLPGLTDTEKPRMRGPKRASKIRKLFNL K+DDVR YVNTYR+K        VSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLKKEDDVRTYVNTYRRKFTNKKGKEVSKAPKI 180

Query: 217 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRL- 265
           QRLVTPLTLQRKR RIA+KKK+IAKA S+AA+YQKLLASRLKEQR+RRSESLAKKRSRL 
Sbjct: 181 QRLVTPLTLQRKRARIADKKKKIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSRLS 240

[Close]

BLAST of ClCG05G000450 vs. NCBI nr
Match: gi|659074845|ref|XP_008437828.1| (PREDICTED: 40S ribosomal protein S6-like [Cucumis melo])

HSP 1 Score: 427.9 bits (1099), Expect = 1.3e-116
Identity = 227/250 (90.80%), Postives = 229/250 (91.60%), Query Frame = 1


Query: 37  MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 96
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEV+GDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVTGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 97  FPMKQGVLTPGRVRLLLHR-------------ERRRKSVRGCIVSPDLSVLNLVIVKKGD 156
           FPMKQGVLTPGRVRLLLHR             ERRRKSVRGCIVSPDLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGD 120

Query: 157 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYR--------KKVSKAPKI 216
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSK+DDVRKYVNTYR        KKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTIKSGKKVSKAPKI 180

Query: 217 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 266
           QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240

[Close]

BLAST of ClCG05G000450 vs. NCBI nr
Match: gi|449431994|ref|XP_004133785.1| (PREDICTED: 40S ribosomal protein S6-like [Cucumis sativus])

HSP 1 Score: 424.9 bits (1091), Expect = 1.1e-115
Identity = 226/250 (90.40%), Postives = 228/250 (91.20%), Query Frame = 1


Query: 37  MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 96
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEV+GDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVAGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 97  FPMKQGVLTPGRVRLLLHR-------------ERRRKSVRGCIVSPDLSVLNLVIVKKGD 156
           FPMKQGVLTPGRVRLLLHR             ERRRKSVRGCIVS DLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 157 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYR--------KKVSKAPKI 216
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSK+DDVRKYVNTYR        KKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180

Query: 217 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 266
           QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240

[Close]

BLAST of ClCG05G000450 vs. NCBI nr
Match: gi|659088196|ref|XP_008444852.1| (PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S6-like [Cucumis melo])

HSP 1 Score: 421.8 bits (1083), Expect = 9.0e-115
Identity = 224/249 (89.96%), Postives = 226/249 (90.76%), Query Frame = 1


Query: 37  MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 96
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 97  FPMKQGVLTPGRVRLLLHR-------------ERRRKSVRGCIVSPDLSVLNLVIVKKGD 156
           FPMKQGVLTPGRVRLLLHR             ERRRKSVRGCIVS DLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 157 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYR--------KKVSKAPKI 216
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSK+DDVRKYVNTYR        KKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180

Query: 217 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 265
           QRLVTPLTLQRKRGRIAEK KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKXKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240

[Close]

BLAST of ClCG05G000450 vs. NCBI nr
Match: gi|449469843|ref|XP_004152628.1| (PREDICTED: 40S ribosomal protein S6 [Cucumis sativus])

HSP 1 Score: 421.8 bits (1083), Expect = 9.0e-115
Identity = 224/249 (89.96%), Postives = 227/249 (91.16%), Query Frame = 1


Query: 37  MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 96
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 97  FPMKQGVLTPGRVRLLLHR-------------ERRRKSVRGCIVSPDLSVLNLVIVKKGD 156
           FPMKQGVLTPGRVRLLLHR             ERRRKSVRGCIVS DLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 157 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYR--------KKVSKAPKI 216
           NDLPGLTD+EKPRMRGPKRASKIRKLFNLSK+DDVRKYVNTYR        KKVSKAPKI
Sbjct: 121 NDLPGLTDSEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKVSKAPKI 180

Query: 217 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 265
           QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLL+SRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLSSRLKEQRERRSESLAKKRSRLS 240

[Close]

BLAST of ClCG05G000450 vs. NCBI nr
Match: gi|823206980|ref|XP_012437220.1| (PREDICTED: 40S ribosomal protein S6-like isoform X1 [Gossypium raimondii])

HSP 1 Score: 418.7 bits (1075), Expect = 7.6e-114
Identity = 221/249 (88.76%), Postives = 226/249 (90.76%), Query Frame = 1


Query: 37  MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 96
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGD+LGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 97  FPMKQGVLTPGRVRLLLHR-------------ERRRKSVRGCIVSPDLSVLNLVIVKKGD 156
           FPMKQGVLTPGRVRLLLHR             ERRRKSVRGCIVS DLSVLNLVIVKKG+
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGE 120

Query: 157 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYR--------KKVSKAPKI 216
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSK+DDVRKYVNTYR        KKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKNGKKVSKAPKI 180

Query: 217 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 265
           QRLVTPLTLQRKRGRIAEKKKR+AKAK+EAAEYQKLLA RLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRVAKAKAEAAEYQKLLAQRLKEQRERRSESLAKKRSRLS 240

The following BLAST results are available for this feature:

BLAST of ClCG05G000450 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RS6_ASPOF	6.0e-111	86.83	40S ribosomal protein S6 OS=Asparagus officinalis GN=rps6 PE=2 SV=1	[more]
RS62_ARATH	5.1e-110	83.94	40S ribosomal protein S6-2 OS=Arabidopsis thaliana GN=RPS6B PE=1 SV=3	[more]
RS61_ARATH	6.7e-110	83.60	40S ribosomal protein S6-1 OS=Arabidopsis thaliana GN=RPS6A PE=1 SV=2	[more]
RS6_TOBAC	1.8e-78	80.10	40S ribosomal protein S6 (Fragment) OS=Nicotiana tabacum GN=RPS6 PE=2 SV=2	[more]
RS6_RAT	1.2e-74	63.71	40S ribosomal protein S6 OS=Rattus norvegicus GN=Rps6 PE=1 SV=1	[more]

BLAST of ClCG05G000450 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5R5_CUCSA	7.4e-116	90.40	40S ribosomal protein S6 OS=Cucumis sativus GN=Csa_3G118140 PE=3 SV=1	[more]
A0A0A0LL90_CUCSA	6.3e-115	89.96	40S ribosomal protein S6 OS=Cucumis sativus GN=Csa_2G369060 PE=3 SV=1	[more]
K4DHA3_SOLLC	5.3e-114	88.76	40S ribosomal protein S6 OS=Solanum lycopersicum PE=3 SV=1	[more]
A0A0D2T2W0_GOSRA	5.3e-114	88.76	40S ribosomal protein S6 OS=Gossypium raimondii GN=B456_008G090300 PE=3 SV=1	[more]
A0A0B0PKG8_GOSAR	6.9e-114	88.35	40S ribosomal protein S6 OS=Gossypium arboreum GN=F383_09205 PE=3 SV=1	[more]

BLAST of ClCG05G000450 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G10360.1	2.9e-111	83.94	Ribosomal protein S6e	[more]
AT4G31700.1	3.7e-111	83.60	ribosomal protein S6	[more]

BLAST of ClCG05G000450 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659074845\|ref\|XP_008437828.1\|	1.3e-116	90.80	PREDICTED: 40S ribosomal protein S6-like [Cucumis melo]	[more]
gi\|449431994\|ref\|XP_004133785.1\|	1.1e-115	90.40	PREDICTED: 40S ribosomal protein S6-like [Cucumis sativus]	[more]
gi\|659088196\|ref\|XP_008444852.1\|	9.0e-115	89.96	PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S6-like [Cucumis melo]	[more]
gi\|449469843\|ref\|XP_004152628.1\|	9.0e-115	89.96	PREDICTED: 40S ribosomal protein S6 [Cucumis sativus]	[more]
gi\|823206980\|ref\|XP_012437220.1\|	7.6e-114	88.76	PREDICTED: 40S ribosomal protein S6-like isoform X1 [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001377	Ribosomal_S6e
IPR014401	Ribosomal_S6_euk
IPR018282	Ribosomal_S6e_CS

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
biological_process	GO:0042274	ribosomal small subunit biogenesis
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005622	intracellular
cellular_component	GO:0022627	cytosolic small ribosomal subunit
molecular_function	GO:0003735	structural constituent of ribosome

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG05G000450.1	ClCG05G000450.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001377	Ribosomal protein S6e	PANTHER	PTHR11502	40S RIBOSOMAL PROTEIN S6	coord: 38..258 score: 3.5E
IPR001377	Ribosomal protein S6e	PFAM	PF01092	Ribosomal_S6e	coord: 37..151 score: 1.1
IPR001377	Ribosomal protein S6e	SMART	SM01405	Ribosomal_S6e_2	coord: 37..151 score: 1.5
IPR014401	Ribosomal protein S6, eukaryotic	PIR	PIRSF002129	RPS6e	coord: 37..264 score: 5.3E
IPR018282	Ribosomal protein S6e, conserved site	PROSITE	PS00578	RIBOSOMAL_S6E	coord: 88..99 scor
None	No IPR available	unknown	Coil	Coil	coord: 204..231 scor
None	No IPR available	PANTHER	PTHR11502:SF10	SUBFAMILY NOT NAMED	coord: 38..258 score: 3.5E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG05G000450	Csa3G118140	Cucumber (Chinese Long) v2	cuwcgB222
ClCG05G000450	MELO3C005983	Melon (DHL92) v3.5.1	mewcgB427
ClCG05G000450	Cla021113	Watermelon (97103) v1	wcgwmB286
ClCG05G000450	Cla97C05G080440	Watermelon (97103) v2	wcgwmbB229
ClCG05G000450	CSPI03G07490	Wild cucumber (PI 183967)	cpiwcgB226
ClCG05G000450	Cucsa.259660	Cucumber (Gy14) v1	cgywcgB451
ClCG05G000450	CmaCh06G009970	Cucurbita maxima (Rimu)	cmawcgB742
ClCG05G000450	CmoCh06G010070	Cucurbita moschata (Rifu)	cmowcgB743
ClCG05G000450	Lsi05G021760	Bottle gourd (USVL1VR-Ls)	lsiwcgB335
ClCG05G000450	Cp4.1LG08g00580	Cucurbita pepo (Zucchini)	cpewcgB787
ClCG05G000450	CsGy3G007610	Cucumber (Gy14) v2	cgybwcgB203
ClCG05G000450	MELO3C005983.2	Melon (DHL92) v3.6.1	medwcgB416
ClCG05G000450	Carg20923	Silver-seed gourd	carwcgB0968
ClCG05G000450	CsaV3_3G007620	Cucumber (Chinese Long) v3	cucwcgB225

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG05G000450	Cucurbita maxima (Rimu)	cmawcgB738
ClCG05G000450	Cucurbita moschata (Rifu)	cmowcgB219
ClCG05G000450	Cucurbita pepo (Zucchini)	cpewcgB559
ClCG05G000450	Silver-seed gourd	carwcgB0128
ClCG05G000450	Wax gourd	wcgwgoB439
ClCG05G000450	Cucurbita maxima (Rimu)	cmawcgB006
ClCG05G000450	Cucurbita maxima (Rimu)	cmawcgB233