CSPI03G07490 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI03G07490
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	40S ribosomal protein S6
Location	Chr3 : 6592400 .. 6595317 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTGTTTGATATCTGCGGCCGCCACTGCTACACTCTTGAACATGAAGGTTCGGCCCTTAAATTTCTCTTCTTCTCCACTCTTTTCTCTACTTTTACTTCTTTACTAACTTTGACTTTTCGTGTTTCCAGTTTAATATCGCCAATCCGACTACTGGTTGCCAGAAGAAGCTCGAAATCGACGATGATCAGAAACTGTTAGATTTCAAATTCTCTTATTCTTTAATTTGTTGTCAAAGTGACGAACGGTGGTGCATTAATTGTGGATGAGCTTTTTGTCCATCTTTAGTCGAATGTTCATATTGTTACAATAACATAATTATATGGACATGGGGTTGGTCTAATTGAATATTGAAAAGCATATTTTTAATTCAAACACTGTGATTCGAGTTGCATAATACTACAGTAGATAAATGGACCCATCTTGATCAGTAGAGTAGTGTTGAAATCGTTTATTCGATATGTTTGCCGTTTAAATTTTGTAGTTACCGTTCAGCCTTGCTTTGTGGGATTTCACTAAGGCCATGTTTGGTATGGATGTTTTATATGAATTAGATTCCCACTGCTTGAACTGAATTGTTTTTTTAAAAATGTTTTTGGGCTGAACAGTCCGATTCGTGTAAATTCTGGAAACATTTTCCAGTAAATTCAAAATTTAAATTTTAAATGCATATTAATATTAAAAAAAACAATCGTAGTATTTCATATTATAAACTCAATTCATTTATGTTAAATTAAAATTTGTATTATAAATGATAGATATTACAAGGTTTTCAAAATCTACATCAAATTTTGGACATTGTAAAGTTTTAGTATTTAAAAAAAATGGAATTTGGCTAAGAATTCAAATCTTTACCACAATTTAGGAAAATGGATAACTAAATATCAAATGATTATATGAAATGTTGCTTAGCTGTCTCTTCTTGTTTGTTTTGTATGTTTTCCATCATTTTAAACCTGGTATAAATTTCATCATGTACTAAAACTATCCTTTTGTCATTGTTCAGCCGTGCTTTTTTTGACAAGAGGATCTCCCAGGAGGTCGCTGGAGATTCCCTTGGAGAGGTATGTGTGTGGTCTTCTGTCGCCCTATCCAATAAATGAGATCTTAATTTCTAGTTGCTGTCTCCGAGTTTACTGATTTAGGATTTTCTCTTACACAGGAATTCAAGGGCTATGTTTTTAAGATTATGGGAGGTTGTGACAAGCAGGGTTTCCCAATGAAACAGGGAGTTTTGACCCCTGGTCGTGTCCGTCTCTTGCTACACAGAGGTTTGTGGGGCTGTTTATACTAGTGAATGAATAGTTAGCCCATTTGATCATGTTTGCGGCTTTTATTTATATCATCATTTTCTTTCATTTATTTCAATAATGTTTAGTTTCTTACCAAAAACATATTTGTGGCTTTTGTTATTTGTTTTCATTAGATTATTGCACTGTCCAAGATTACAATGCAACCCTCTAGTATATTATTACTTTCTTGTCTCTTATTTGGTGTAAATTGATCTCCTAGGTGTTTTTTTTTTAATCCATTGGGCAGAATCTTTTGTAATTTAATCCAAGTTTATTGCACTATTATAATTAATGCAAACATGTATGCTGATTTCTGTGGCCAGGTACTCCTTGTTTCCGCGGTTATGGTAGGCGCAATGGAGAACGCAGAAGGAAGTCTGTGCGTGGATGCATTGTGAGCCAGGACCTTTCTGTTCTGAATCTGGTTATAGTGAAGAAGGGAGATAATGATCTTCCTGGCTTGACAGACACTGAGAAACCAAGAATGAGGGGTCCCAAGAGGGCTTCCAAGATTCGCAAACTTTTCAATTTGTCAAAGGAGGATGATGTTCGAAAGTATGTTAACACATACCGTAGATCATTCACCACAAAATCTGGTATGGTTTGTGATTCCTTTGTGGTTGAACTTGTGATAAAAAATAAGGGATTATTTTGATTGACATTCTAAATGCTATTCAAAGACACTCAAAAACATTTTTGCCAGTGCTTGGAAAATCAATCCAAAAACACTTTTTTTTTTTCACTTTGAAATACTTTTTTCAACTGTGCCTTATAGATGGTGCAAGTACTAGTTGAGGTCTAATACTTTTCTCAAGGATTATTGGATGGATGTATTCCTGCTTTGTATTGTCCTAACGTCTCTAGGTGAATGAACCTTCATTTGACATTGGATTACATTGTTGTTCAATATTGCTCCTGGTCGAACATCTAAGTGGATCGTGCTTTGTAACTGAACTAATCTCCTAGTTTAATTTTGGCTACCATAGAATTTTATTTTATGCAAATTGTTTTTTCAGTTCCATATATTATGATTCGTTTATGATGATTTTTATCTGATTGGCAGGCAAAAAGGTTAGCAAAGCTCCCAAGATTCAGAGGTTGGTTACCCCACTGACCCTGCAGAGGAAGCGAGGAAGAATTGCTGAGAAAAAGAAGAGAACTGCGAAGGCCAAGTCTGAGGCTGCTGAGTATCAGAAGCTCCTGGCCTCTAGGTTGAAGGAGCAAAGAGAACGTCGTAGTGAGAGTTTAGCAAAGAAGAGATCCAGACTCTCTGCTGCTTCAAAGCCGTCTATCGCTGCTGCTTAGTTTTGTTCCCATTGTTGGTGTCAGTGTTCTATTATCTTTATATTTGCCATATTGTTTTTCTTTCAAGAGTGTACTTTTCGCGGCCGCTTAATATGAGATCTGGAACGTTTCGGTAGTTTTGATGTCTGTTAGTCCACATTTTCTTCTTCCCTTTGTTTATGGATTCATGCAAGTTGTAAATTGTTGTTTCTCACCAAAGTAGAGATTAGAATCTCCATTTCACTTGTATTCACTTATTGACAGTTATTTATACATATACTTGATTGAGGGATATGAGTCCTTAACAACTAAATGAAAGCCATATTTGAGATAAAAAAAGACC

mRNA sequence

ATGAAGTTTAATATCGCCAATCCGACTACTGGTTGCCAGAAGAAGCTCGAAATCGACGATGATCAGAAACTCCGTGCTTTTTTTGACAAGAGGATCTCCCAGGAGGTCGCTGGAGATTCCCTTGGAGAGGAATTCAAGGGCTATGTTTTTAAGATTATGGGAGGTTGTGACAAGCAGGGTTTCCCAATGAAACAGGGAGTTTTGACCCCTGGTCGTGTCCGTCTCTTGCTACACAGAGGTACTCCTTGTTTCCGCGGTTATGGTAGGCGCAATGGAGAACGCAGAAGGAAGTCTGTGCGTGGATGCATTGTGAGCCAGGACCTTTCTGTTCTGAATCTGGTTATAGTGAAGAAGGGAGATAATGATCTTCCTGGCTTGACAGACACTGAGAAACCAAGAATGAGGGGTCCCAAGAGGGCTTCCAAGATTCGCAAACTTTTCAATTTGTCAAAGGAGGATGATGTTCGAAAGTATGTTAACACATACCGTAGATCATTCACCACAAAATCTGGCAAAAAGGTTAGCAAAGCTCCCAAGATTCAGAGGTTGGTTACCCCACTGACCCTGCAGAGGAAGCGAGGAAGAATTGCTGAGAAAAAGAAGAGAACTGCGAAGGCCAAGTCTGAGGCTGCTGAGTATCAGAAGCTCCTGGCCTCTAGGTTGAAGGAGCAAAGAGAACGTCGTAGTGAGAGTTTAGCAAAGAAGAGATCCAGACTCTCTGCTGCTTCAAAGCCGTCTATCGCTGCTGCTTAG

Coding sequence (CDS)

ATGAAGTTTAATATCGCCAATCCGACTACTGGTTGCCAGAAGAAGCTCGAAATCGACGATGATCAGAAACTCCGTGCTTTTTTTGACAAGAGGATCTCCCAGGAGGTCGCTGGAGATTCCCTTGGAGAGGAATTCAAGGGCTATGTTTTTAAGATTATGGGAGGTTGTGACAAGCAGGGTTTCCCAATGAAACAGGGAGTTTTGACCCCTGGTCGTGTCCGTCTCTTGCTACACAGAGGTACTCCTTGTTTCCGCGGTTATGGTAGGCGCAATGGAGAACGCAGAAGGAAGTCTGTGCGTGGATGCATTGTGAGCCAGGACCTTTCTGTTCTGAATCTGGTTATAGTGAAGAAGGGAGATAATGATCTTCCTGGCTTGACAGACACTGAGAAACCAAGAATGAGGGGTCCCAAGAGGGCTTCCAAGATTCGCAAACTTTTCAATTTGTCAAAGGAGGATGATGTTCGAAAGTATGTTAACACATACCGTAGATCATTCACCACAAAATCTGGCAAAAAGGTTAGCAAAGCTCCCAAGATTCAGAGGTTGGTTACCCCACTGACCCTGCAGAGGAAGCGAGGAAGAATTGCTGAGAAAAAGAAGAGAACTGCGAAGGCCAAGTCTGAGGCTGCTGAGTATCAGAAGCTCCTGGCCTCTAGGTTGAAGGAGCAAAGAGAACGTCGTAGTGAGAGTTTAGCAAAGAAGAGATCCAGACTCTCTGCTGCTTCAAAGCCGTCTATCGCTGCTGCTTAG

Homology

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BLAST of CSPI03G07490 vs. Swiss-Prot
Match: RS6_ASPOF (40S ribosomal protein S6 OS=Asparagus officinalis GN=rps6 PE=2 SV=1)

HSP 1 Score: 441.8 bits (1135), Expect = 5.0e-123
Identity = 228/243 (93.83%), Postives = 235/243 (96.71%), Query Frame = 1


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVAGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAF+DKRISQEV+GD+LGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVS DLSVLNLVIVKKG+
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180
           NDLPGLTD EKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR+FT K GK  SKAPKI
Sbjct: 121 NDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTNKKGKTCSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRTAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKR RIAEKKKR AKAKSEAAEYQKLLASRLKEQR+RRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRARIAEKKKRVAKAKSEAAEYQKLLASRLKEQRDRRSESLAKKRSRLS 240

Query: 241 AAS 244
           AA+
Sbjct: 241 AAA 243

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BLAST of CSPI03G07490 vs. Swiss-Prot
Match: RS62_ARATH (40S ribosomal protein S6-2 OS=Arabidopsis thaliana GN=RPS6B PE=1 SV=3)

HSP 1 Score: 432.6 bits (1111), Expect = 3.0e-120
Identity = 223/249 (89.56%), Postives = 236/249 (94.78%), Query Frame = 1


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVAGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFN+ANPTTGCQKKLEIDDDQKLRAFFDKR+SQEV+GD+LGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDQKLRAFFDKRLSQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRG+GRR GERRRKSVRGCIVS DLSVLNLVIVKKG 
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGV 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180
           +DLPGLTDTEKPRMRGPKRASKIRKLFNL KEDDVRKYVNTYRR+FT K GKKVSKAPKI
Sbjct: 121 SDLPGLTDTEKPRMRGPKRASKIRKLFNLGKEDDVRKYVNTYRRTFTNKKGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRTAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKR RIA+KKKR AKA S+AA+YQKLLASRLKEQR+RRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRARIADKKKRIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSRLS 240

Query: 241 AASKPSIAA 250
           +A    +AA
Sbjct: 241 SAPAKPVAA 249

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BLAST of CSPI03G07490 vs. Swiss-Prot
Match: RS61_ARATH (40S ribosomal protein S6-1 OS=Arabidopsis thaliana GN=RPS6A PE=1 SV=2)

HSP 1 Score: 431.4 bits (1108), Expect = 6.7e-120
Identity = 223/250 (89.20%), Postives = 237/250 (94.80%), Query Frame = 1


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVAGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFN+ANPTTGCQKKLEIDDDQKLRAF+DKRISQEV+GD+LGEEFKGYVFKI GGCDKQG
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIKGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRG+GRR GERRRKSVRGCIVS DLSVLNLVIVKKG+
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNL KEDDVR YVNTYRR FT K GK+VSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLKKEDDVRTYVNTYRRKFTNKKGKEVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRTAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRL- 240
           QRLVTPLTLQRKR RIA+KKK+ AKA S+AA+YQKLLASRLKEQR+RRSESLAKKRSRL 
Sbjct: 181 QRLVTPLTLQRKRARIADKKKKIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSRLS 240

Query: 241 SAASKPSIAA 250
           SAA+KPS+ A
Sbjct: 241 SAAAKPSVTA 250

[Close]

BLAST of CSPI03G07490 vs. Swiss-Prot
Match: RS6_TOBAC (40S ribosomal protein S6 (Fragment) OS=Nicotiana tabacum GN=RPS6 PE=2 SV=2)

HSP 1 Score: 317.0 bits (811), Expect = 1.8e-85
Identity = 177/204 (86.76%), Postives = 184/204 (90.20%), Query Frame = 1


Query: 46  KGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVS 105
           KGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLL+RGTPCFRGYGRRNGERRRKSVRGCIVS
Sbjct: 1   KGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLYRGTPCFRGYGRRNGERRRKSVRGCIVS 60

Query: 106 QDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRS 165
            DLSVLNLVIVKKG+NDLPGLTDTEKPRMRGP+   +   L+   KEDDVRKYVNT    
Sbjct: 61  PDLSVLNLVIVKKGENDLPGLTDTEKPRMRGPREPQRSEALY--FKEDDVRKYVNT-TAE 120

Query: 166 FTTKSGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRTAKAKSEAAEYQKLLASRLKEQR 225
           FTTK   K SKAPKIQRLVTPLTLQRKR RIA+KKKR AKAKSEAAEYQKLLASRLKEQR
Sbjct: 121 FTTK--WKGSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKSEAAEYQKLLASRLKEQR 180

Query: 226 ERRSESLAKKRSRLSAASKPSIAA 250
           E+RSESLAKKRSRLSAASKPSIAA
Sbjct: 181 EKRSESLAKKRSRLSAASKPSIAA 199

[Close]

BLAST of CSPI03G07490 vs. Swiss-Prot
Match: RS6_RAT (40S ribosomal protein S6 OS=Rattus norvegicus GN=Rps6 PE=1 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 2.9e-78
Identity = 161/241 (66.80%), Postives = 191/241 (79.25%), Query Frame = 1


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVAGDSLGEEFKGYVFKIMGGCDKQG 60
           MK NI+ P TGCQK +E+DD++KLR F++KR++ EVA D+LGEE+KGYV +I GG DKQG
Sbjct: 1   MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLT GRVRLLL +G  C+R   RR GER+RKSVRGCIV  +LSVLNLVIVKKG+
Sbjct: 61  FPMKQGVLTHGRVRLLLSKGHSCYR--PRRTGERKRKSVRGCIVDANLSVLNLVIVKKGE 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180
            D+PGLTDT  PR  GPKRAS+IRKLFNLSKEDDVR+YV   R+    +  K  +KAPKI
Sbjct: 121 KDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV--VRKPLNKEGKKPRTKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRTAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTP  LQ KR RIA KK+RT K K EAAEY KLLA R+KE +E+R E +AK+R RLS
Sbjct: 181 QRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQIAKRR-RLS 236

Query: 241 A 242
           +
Sbjct: 241 S 236

[Close]

BLAST of CSPI03G07490 vs. TrEMBL
Match: A0A0A0L5R5_CUCSA (40S ribosomal protein S6 OS=Cucumis sativus GN=Csa_3G118140 PE=3 SV=1)

HSP 1 Score: 474.9 bits (1221), Expect = 5.9e-131
Identity = 249/250 (99.60%), Postives = 249/250 (99.60%), Query Frame = 1


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVAGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVAGDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVAGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRTAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKRGRIAEKKKR AKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240

Query: 241 AASKPSIAAA 251
           AASKPSIAAA
Sbjct: 241 AASKPSIAAA 250

[Close]

BLAST of CSPI03G07490 vs. TrEMBL
Match: A0A0A0LL90_CUCSA (40S ribosomal protein S6 OS=Cucumis sativus GN=Csa_2G369060 PE=3 SV=1)

HSP 1 Score: 468.8 bits (1205), Expect = 4.2e-129
Identity = 244/249 (97.99%), Postives = 248/249 (99.60%), Query Frame = 1


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVAGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEV+GDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180
           NDLPGLTD+EKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTK+GKKVSKAPKI
Sbjct: 121 NDLPGLTDSEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRTAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKRGRIAEKKKR AKAKSEAAEYQKLL+SRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLSSRLKEQRERRSESLAKKRSRLS 240

Query: 241 AASKPSIAA 250
           AASKPSIAA
Sbjct: 241 AASKPSIAA 249

[Close]

BLAST of CSPI03G07490 vs. TrEMBL
Match: A0A0D2T2W0_GOSRA (40S ribosomal protein S6 OS=Gossypium raimondii GN=B456_008G090300 PE=3 SV=1)

HSP 1 Score: 465.3 bits (1196), Expect = 4.7e-128
Identity = 241/249 (96.79%), Postives = 247/249 (99.20%), Query Frame = 1


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVAGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEV+GD+LGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKG+
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGE 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR+FTTK+GKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKNGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRTAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKRGRIAEKKKR AKAK+EAAEYQKLLA RLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRVAKAKAEAAEYQKLLAQRLKEQRERRSESLAKKRSRLS 240

Query: 241 AASKPSIAA 250
           AASKPSIAA
Sbjct: 241 AASKPSIAA 249

[Close]

BLAST of CSPI03G07490 vs. TrEMBL
Match: A0A0D2QN24_GOSRA (40S ribosomal protein S6 OS=Gossypium raimondii GN=B456_003G041100 PE=3 SV=1)

HSP 1 Score: 465.3 bits (1196), Expect = 4.7e-128
Identity = 241/249 (96.79%), Postives = 247/249 (99.20%), Query Frame = 1


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVAGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEV+GD+LGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKG+
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGE 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR+FTTKSGKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRTAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKRGRIAEKKKR AKAK++AAEYQKLLA RLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRVAKAKADAAEYQKLLAQRLKEQRERRSESLAKKRSRLS 240

Query: 241 AASKPSIAA 250
           AASKPSIAA
Sbjct: 241 AASKPSIAA 249

[Close]

BLAST of CSPI03G07490 vs. TrEMBL
Match: A0A0B0MIQ0_GOSAR (40S ribosomal protein S6 OS=Gossypium arboreum GN=F383_17949 PE=3 SV=1)

HSP 1 Score: 465.3 bits (1196), Expect = 4.7e-128
Identity = 241/249 (96.79%), Postives = 247/249 (99.20%), Query Frame = 1


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVAGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEV+GD+LGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKG+
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGE 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR+FTTKSGKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRTAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKRGRIAEKKKR AKAK++AAEYQKLLA RLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRVAKAKADAAEYQKLLAQRLKEQRERRSESLAKKRSRLS 240

Query: 241 AASKPSIAA 250
           AASKPSIAA
Sbjct: 241 AASKPSIAA 249

[Close]

BLAST of CSPI03G07490 vs. TAIR10
Match: AT5G10360.1 (AT5G10360.1 Ribosomal protein S6e)

HSP 1 Score: 432.6 bits (1111), Expect = 1.7e-121
Identity = 223/249 (89.56%), Postives = 236/249 (94.78%), Query Frame = 1


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVAGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFN+ANPTTGCQKKLEIDDDQKLRAFFDKR+SQEV+GD+LGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDQKLRAFFDKRLSQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRG+GRR GERRRKSVRGCIVS DLSVLNLVIVKKG 
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGV 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180
           +DLPGLTDTEKPRMRGPKRASKIRKLFNL KEDDVRKYVNTYRR+FT K GKKVSKAPKI
Sbjct: 121 SDLPGLTDTEKPRMRGPKRASKIRKLFNLGKEDDVRKYVNTYRRTFTNKKGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRTAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKR RIA+KKKR AKA S+AA+YQKLLASRLKEQR+RRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRARIADKKKRIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSRLS 240

Query: 241 AASKPSIAA 250
           +A    +AA
Sbjct: 241 SAPAKPVAA 249

[Close]

BLAST of CSPI03G07490 vs. TAIR10
Match: AT4G31700.1 (AT4G31700.1 ribosomal protein S6)

HSP 1 Score: 431.4 bits (1108), Expect = 3.8e-121
Identity = 223/250 (89.20%), Postives = 237/250 (94.80%), Query Frame = 1


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVAGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFN+ANPTTGCQKKLEIDDDQKLRAF+DKRISQEV+GD+LGEEFKGYVFKI GGCDKQG
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIKGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRG+GRR GERRRKSVRGCIVS DLSVLNLVIVKKG+
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNL KEDDVR YVNTYRR FT K GK+VSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLKKEDDVRTYVNTYRRKFTNKKGKEVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRTAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRL- 240
           QRLVTPLTLQRKR RIA+KKK+ AKA S+AA+YQKLLASRLKEQR+RRSESLAKKRSRL 
Sbjct: 181 QRLVTPLTLQRKRARIADKKKKIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSRLS 240

Query: 241 SAASKPSIAA 250
           SAA+KPS+ A
Sbjct: 241 SAAAKPSVTA 250

[Close]

BLAST of CSPI03G07490 vs. NCBI nr
Match: gi|449431994|ref|XP_004133785.1| (PREDICTED: 40S ribosomal protein S6-like [Cucumis sativus])

HSP 1 Score: 474.9 bits (1221), Expect = 8.5e-131
Identity = 249/250 (99.60%), Postives = 249/250 (99.60%), Query Frame = 1


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVAGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVAGDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVAGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRTAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKRGRIAEKKKR AKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240

Query: 241 AASKPSIAAA 251
           AASKPSIAAA
Sbjct: 241 AASKPSIAAA 250

[Close]

BLAST of CSPI03G07490 vs. NCBI nr
Match: gi|659088196|ref|XP_008444852.1| (PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S6-like [Cucumis melo])

HSP 1 Score: 469.9 bits (1208), Expect = 2.7e-129
Identity = 245/249 (98.39%), Postives = 247/249 (99.20%), Query Frame = 1


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVAGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEV+GDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRTAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKRGRIAEK KR AKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKXKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240

Query: 241 AASKPSIAA 250
           AASKPS+AA
Sbjct: 241 AASKPSVAA 249

[Close]

BLAST of CSPI03G07490 vs. NCBI nr
Match: gi|449469843|ref|XP_004152628.1| (PREDICTED: 40S ribosomal protein S6 [Cucumis sativus])

HSP 1 Score: 468.8 bits (1205), Expect = 6.1e-129
Identity = 244/249 (97.99%), Postives = 248/249 (99.60%), Query Frame = 1


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVAGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEV+GDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180
           NDLPGLTD+EKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTK+GKKVSKAPKI
Sbjct: 121 NDLPGLTDSEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRTAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKRGRIAEKKKR AKAKSEAAEYQKLL+SRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLSSRLKEQRERRSESLAKKRSRLS 240

Query: 241 AASKPSIAA 250
           AASKPSIAA
Sbjct: 241 AASKPSIAA 249

[Close]

BLAST of CSPI03G07490 vs. NCBI nr
Match: gi|659074845|ref|XP_008437828.1| (PREDICTED: 40S ribosomal protein S6-like [Cucumis melo])

HSP 1 Score: 468.8 bits (1205), Expect = 6.1e-129
Identity = 246/250 (98.40%), Postives = 246/250 (98.40%), Query Frame = 1


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVAGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEV GDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVTGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVS DLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGD 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFT KSGKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTIKSGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRTAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKRGRIAEKKKR AKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240

Query: 241 AASKPSIAAA 251
           AASKPSIAAA
Sbjct: 241 AASKPSIAAA 250

[Close]

BLAST of CSPI03G07490 vs. NCBI nr
Match: gi|823206980|ref|XP_012437220.1| (PREDICTED: 40S ribosomal protein S6-like isoform X1 [Gossypium raimondii])

HSP 1 Score: 465.3 bits (1196), Expect = 6.7e-128
Identity = 241/249 (96.79%), Postives = 247/249 (99.20%), Query Frame = 1


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVAGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEV+GD+LGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKG+
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGE 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR+FTTK+GKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKNGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRTAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKRGRIAEKKKR AKAK+EAAEYQKLLA RLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRVAKAKAEAAEYQKLLAQRLKEQRERRSESLAKKRSRLS 240

Query: 241 AASKPSIAA 250
           AASKPSIAA
Sbjct: 241 AASKPSIAA 249

The following BLAST results are available for this feature:

BLAST of CSPI03G07490 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RS6_ASPOF	5.0e-123	93.83	40S ribosomal protein S6 OS=Asparagus officinalis GN=rps6 PE=2 SV=1	[more]
RS62_ARATH	3.0e-120	89.56	40S ribosomal protein S6-2 OS=Arabidopsis thaliana GN=RPS6B PE=1 SV=3	[more]
RS61_ARATH	6.7e-120	89.20	40S ribosomal protein S6-1 OS=Arabidopsis thaliana GN=RPS6A PE=1 SV=2	[more]
RS6_TOBAC	1.8e-85	86.76	40S ribosomal protein S6 (Fragment) OS=Nicotiana tabacum GN=RPS6 PE=2 SV=2	[more]
RS6_RAT	2.9e-78	66.80	40S ribosomal protein S6 OS=Rattus norvegicus GN=Rps6 PE=1 SV=1	[more]

BLAST of CSPI03G07490 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5R5_CUCSA	5.9e-131	99.60	40S ribosomal protein S6 OS=Cucumis sativus GN=Csa_3G118140 PE=3 SV=1	[more]
A0A0A0LL90_CUCSA	4.2e-129	97.99	40S ribosomal protein S6 OS=Cucumis sativus GN=Csa_2G369060 PE=3 SV=1	[more]
A0A0D2T2W0_GOSRA	4.7e-128	96.79	40S ribosomal protein S6 OS=Gossypium raimondii GN=B456_008G090300 PE=3 SV=1	[more]
A0A0D2QN24_GOSRA	4.7e-128	96.79	40S ribosomal protein S6 OS=Gossypium raimondii GN=B456_003G041100 PE=3 SV=1	[more]
A0A0B0MIQ0_GOSAR	4.7e-128	96.79	40S ribosomal protein S6 OS=Gossypium arboreum GN=F383_17949 PE=3 SV=1	[more]

BLAST of CSPI03G07490 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G10360.1	1.7e-121	89.56	Ribosomal protein S6e	[more]
AT4G31700.1	3.8e-121	89.20	ribosomal protein S6	[more]

BLAST of CSPI03G07490 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449431994\|ref\|XP_004133785.1\|	8.5e-131	99.60	PREDICTED: 40S ribosomal protein S6-like [Cucumis sativus]	[more]
gi\|659088196\|ref\|XP_008444852.1\|	2.7e-129	98.39	PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S6-like [Cucumis melo]	[more]
gi\|449469843\|ref\|XP_004152628.1\|	6.1e-129	97.99	PREDICTED: 40S ribosomal protein S6 [Cucumis sativus]	[more]
gi\|659074845\|ref\|XP_008437828.1\|	6.1e-129	98.40	PREDICTED: 40S ribosomal protein S6-like [Cucumis melo]	[more]
gi\|823206980\|ref\|XP_012437220.1\|	6.7e-128	96.79	PREDICTED: 40S ribosomal protein S6-like isoform X1 [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001377	Ribosomal_S6e
IPR014401	Ribosomal_S6_euk
IPR018282	Ribosomal_S6e_CS

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005622	intracellular
molecular_function	GO:0003735	structural constituent of ribosome

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G07490.1	CSPI03G07490.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001377	Ribosomal protein S6e	PANTHER	PTHR11502	40S RIBOSOMAL PROTEIN S6	coord: 2..243 score: 7.0E
IPR001377	Ribosomal protein S6e	PFAM	PF01092	Ribosomal_S6e	coord: 1..128 score: 3.2
IPR001377	Ribosomal protein S6e	SMART	SM01405	Ribosomal_S6e_2	coord: 1..128 score: 4.5
IPR014401	Ribosomal protein S6, eukaryotic	PIR	PIRSF002129	RPS6e	coord: 1..249 score: 4.7E
IPR018282	Ribosomal protein S6e, conserved site	PROSITE	PS00578	RIBOSOMAL_S6E	coord: 52..63 scor
None	No IPR available	unknown	Coil	Coil	coord: 196..216 scor
None	No IPR available	PANTHER	PTHR11502:SF10	SUBFAMILY NOT NAMED	coord: 2..243 score: 7.0E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI03G07490	Cla021113	Watermelon (97103) v1	cpiwmB231
CSPI03G07490	Csa3G118140	Cucumber (Chinese Long) v2	cpicuB120
CSPI03G07490	MELO3C005983	Melon (DHL92) v3.5.1	cpimeB230
CSPI03G07490	ClCG05G000450	Watermelon (Charleston Gray)	cpiwcgB226
CSPI03G07490	Lsi05G021760	Bottle gourd (USVL1VR-Ls)	cpilsiB207
CSPI03G07490	MELO3C005983.2	Melon (DHL92) v3.6.1	cpimedB224
CSPI03G07490	CsaV3_3G007620	Cucumber (Chinese Long) v3	cpicucB144
CSPI03G07490	Cla97C05G080440	Watermelon (97103) v2	cpiwmbB209
CSPI03G07490	Cucsa.259660	Cucumber (Gy14) v1	cgycpiB383
CSPI03G07490	CmaCh06G009970	Cucurbita maxima (Rimu)	cmacpiB843
CSPI03G07490	CmoCh06G010070	Cucurbita moschata (Rifu)	cmocpiB814
CSPI03G07490	Cp4.1LG08g00580	Cucurbita pepo (Zucchini)	cpecpiB864
CSPI03G07490	CsGy3G007610	Cucumber (Gy14) v2	cgybcpiB110
CSPI03G07490	Carg20923	Silver-seed gourd	carcpiB1031

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI03G07490	Silver-seed gourd	carcpiB0149
CSPI03G07490	Wax gourd	cpiwgoB284
CSPI03G07490	Cucurbita maxima (Rimu)	cmacpiB255
CSPI03G07490	Cucurbita maxima (Rimu)	cmacpiB830
CSPI03G07490	Cucurbita moschata (Rifu)	cmocpiB243
CSPI03G07490	Cucurbita pepo (Zucchini)	cpecpiB611