Carg20923 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg20923
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	40S ribosomal protein S6
Location	Cucurbita_argyrosperma_scaffold_141 : 379477 .. 382182 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTGGTGAAGGCGTAGCCGGCTCGGTCTCTGTTCGTCTCCACTCTGCGGACGCCACTGCTATAATCGAAGCTCTTGAAGATGAAGGTTCGACCTCGTAGATTTCTTTCTTTCTGACTATTTCTTGAGTTTTACTGCTATGCTAACTTTGAGTTTTCGTGTTGATAGTTTAATATTGCGAATCCGACTACTGGATGCCAGAAGAAGCTCGAAATCGACGATGATCAGAAACTGTTAGCTTCCGAATTCCCTTATTCTTCAATCTGTTGTCTTAATCATGAATGTGCATTCTATGTGAATTAATTAATCTGTTCATCTTCAGTCGATTGTTCATATCATAAACATTACATAATTACATGGAGTTGGTCTAATGGAACGTTATCTTTTGGTTTTGACTGAGTTTTACCTAAGCGTGGCTTCATATCTTTAGATCTTTGATTTCAATAGCAAGACTTTCTGGAACTAGGGGATTTGAGATGTATAATAAATAAACTGGCTCTCTTCTGATGAGTAGAGTAGTGTTAGCATCGTTTGTTCGATATGTTCGCAGTTATAATTTTTGAGTTAACGTTCAGTCTTATTACGGTGGATTTCAAATAGCTTATATATGACCTCGCTAGAAATCTATCTGCAGTATTTGCATTGCTTGTTGTGTTTTTCTTTCACTTATTTTTTTCTTAGTGAAGCAGCAATTTCTCCGAGAAACAATATTTAATGAGTTTTAAACGAGCAAAAAGAAAGATTCTAGCTATTTCCTTTTTGTTTGTATGTATGTATGTATGTTTGTCATTATTTTACTTCAGTTTAAATTTCTTTATGTATTAAAATTATCCCTTGTCCTTGTTCAGCCGTGCTTTTTTTGACAAGAGGATCTCCCAGGAGGTCAGTGGAGATTCCCTTGGAGAGGTATGCATTCTCTTCTGTTACAATAAATGAAATGTTAGTTCCTAGTTGCTGTCTCTGAGTTGATTGTGGATGATTTTTCTCTTATCAGGAATTCAAGGGTTATGTTTTCAAGATTATGGGAGGTTGTGACAAGCAGGGATTCCCAATGAAACAGGGTGTTTTGACTCCTGGCCGTGTCCGTCTTTTACTACACAGAGGTTTGTGGAACTGTTTAGACTAGTGAATGTTTGACCATTTAATCATATTTGTGGCCTTCATTATTTGTTTTCAATAATTTATACAATATCATGAGTAATGGAAACATTTGTTTTAACTTTTTTGGACAGGTACCCCTTGTTTCCGTGGTTATGGTAGGCGTAATGGAGAGCGCAGGAGGAAGTCTGTGCGTGGATGCATTGTCAGCCAAGACCTTTCTGTTCTGAATCTGGTTATTGTGAAGAAGGGTGATAATGATCTTCCTGGCTTGACAGACACTGAGAAACCAAGAATGAGGGGTCCCAAGAGGGCATCCAAGATCCGCAAACTTTTCAATCTGTCAAAGGAGGATGATGTCCGAAAGTATGTTAACACATACCGTAGATCATTCACCACAAAATCTGGTATGGCTTACGAATGCTTTTTGTGGTTTTTTTTTTATACGAAACAATTTTATTGATGTATAAAATTTACAAAAAGGATTGGGAGTCAGTGGATCAAAAAAAGATTCCTAGTTGGTTAAAAGGGATGCATAAGAATACGAAGCAAAATGATCTAACAATTAACTCCGAAGATATAGAATAACATTTGAGCAAGTAAAAGATATAGCATAATGTATGAGCGATTAAAAAAACTTATCAAAGGCTTGTTCATTGTCCACGAACAATCCACGGTTATGTGCATCCATGGCGTAGCCTTAGCCTTTGCTGTTGTGGTTTCTAAACATGTCATATACTAACGAAGTAAGTTGGTGGTTATGTGTGTGATTTTCCGGCAGTGCTTGATAAATGGTGCAAGTACAGGTCACGGTCTGATATTTCTTTCATAAATTGGATAGTTCAATGAATGTATTCGTATGATAATCTATTCTTTGAATAGTCCCAACGTTTCTCGATGAACCTTGCATTACATTGTTGTTCAATGTTGCTCCTGTTTACATGTAGATGAAAGCTGGAGACAAGGGAGTTGTAGGGGTTAATGGTCATGTTGGCCATACTTAGGATTTAATATCCAACAAGTTACTTTGGCAACCAAAAGTAGTAGGCTTTAGGCGGTTGTCCCGTAAGAATATAAGAATAGTCGTCGTGTCTGCAACTTGGTGTTGGATGCTCATGAATACAAGAAAAAATAGTAGTGTTGTATTAGTTCCCCAGTCTCATTTTGGCCATTTATAGTAATTGTTTTTTCAGCTGCGTTTATTATGGAATCAAGTTTCTGATGATTTATTTGATTGGCAGGCAAAAAGGTGAGCAAAGCCCCGAAGATTCAGAGGTTGGTTACCCCACTGACCCTGCAGAGGAAGCGAGGAAGAATTGCTGAGAAGAAGAAGAGAATTGCGAAGGCCAAGTCTGAGGCTGCTGAGTATCAGAAGCTCCTGGCCTCTAGGTTGAAGGAGCAAAGGGAACGTCGCAGCGAGAGTTTGGCCAAGAAGAGGTCCAGGCTCTCTGCTGCTTCAAAGCCATCCATTGCTGCTTAGTATGTTCACATTATTTATGTCAGTGTTCTGTTCGCTTTATATTTGCCATCTTGTTTTGCTTTTAGAAGAATGAACTTTTTGCGGCTGCATATAATATGAGATCTGGAATGTTTTGGTATTCTTTCGTGTC

mRNA sequence

CTTGGTGAAGGCGTAGCCGGCTCGGTCTCTGTTCGTCTCCACTCTGCGGACGCCACTGCTATAATCGAAGCTCTTGAAGATGAAGTTTAATATTGCGAATCCGACTACTGGATGCCAGAAGAAGCTCGAAATCGACGATGATCAGAAACTCCGTGCTTTTTTTGACAAGAGGATCTCCCAGGAGGTCAGTGGAGATTCCCTTGGAGAGGAATTCAAGGGTTATGTTTTCAAGATTATGGGAGGTTGTGACAAGCAGGGATTCCCAATGAAACAGGGTGTTTTGACTCCTGGCCGTGTCCGTCTTTTACTACACAGAGGTACCCCTTGTTTCCGTGGTTATGGTAGGCGTAATGGAGAGCGCAGGAGGAAGTCTGTGCGTGGATGCATTGTCAGCCAAGACCTTTCTGTTCTGAATCTGGTTATTGTGAAGAAGGGTGATAATGATCTTCCTGGCTTGACAGACACTGAGAAACCAAGAATGAGGGGTCCCAAGAGGGCATCCAAGATCCGCAAACTTTTCAATCTGTCAAAGGAGGATGATGTCCGAAAGTATGTTAACACATACCGTAGATCATTCACCACAAAATCTGGCAAAAAGGTGAGCAAAGCCCCGAAGATTCAGAGGTTGGTTACCCCACTGACCCTGCAGAGGAAGCGAGGAAGAATTGCTGAGAAGAAGAAGAGAATTGCGAAGGCCAAGTCTGAGGCTGCTGAGTATCAGAAGCTCCTGGCCTCTAGGTTGAAGGAGCAAAGGGAACGTCGCAGCGAGAGTTTGGCCAAGAAGAGGTCCAGGCTCTCTGCTGCTTCAAAGCCATCCATTGCTGCTTAGTATGTTCACATTATTTATGTCAGTGTTCTGTTCGCTTTATATTTGCCATCTTGTTTTGCTTTTAGAAGAATGAACTTTTTGCGGCTGCATATAATATGAGATCTGGAATGTTTTGGTATTCTTTCGTGTC

Coding sequence (CDS)

ATGAAGTTTAATATTGCGAATCCGACTACTGGATGCCAGAAGAAGCTCGAAATCGACGATGATCAGAAACTCCGTGCTTTTTTTGACAAGAGGATCTCCCAGGAGGTCAGTGGAGATTCCCTTGGAGAGGAATTCAAGGGTTATGTTTTCAAGATTATGGGAGGTTGTGACAAGCAGGGATTCCCAATGAAACAGGGTGTTTTGACTCCTGGCCGTGTCCGTCTTTTACTACACAGAGGTACCCCTTGTTTCCGTGGTTATGGTAGGCGTAATGGAGAGCGCAGGAGGAAGTCTGTGCGTGGATGCATTGTCAGCCAAGACCTTTCTGTTCTGAATCTGGTTATTGTGAAGAAGGGTGATAATGATCTTCCTGGCTTGACAGACACTGAGAAACCAAGAATGAGGGGTCCCAAGAGGGCATCCAAGATCCGCAAACTTTTCAATCTGTCAAAGGAGGATGATGTCCGAAAGTATGTTAACACATACCGTAGATCATTCACCACAAAATCTGGCAAAAAGGTGAGCAAAGCCCCGAAGATTCAGAGGTTGGTTACCCCACTGACCCTGCAGAGGAAGCGAGGAAGAATTGCTGAGAAGAAGAAGAGAATTGCGAAGGCCAAGTCTGAGGCTGCTGAGTATCAGAAGCTCCTGGCCTCTAGGTTGAAGGAGCAAAGGGAACGTCGCAGCGAGAGTTTGGCCAAGAAGAGGTCCAGGCTCTCTGCTGCTTCAAAGCCATCCATTGCTGCTTAG

Protein sequence

MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSIAA

Homology

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BLAST of Carg20923 vs. NCBI nr
Match: XP_022948606.1 (40S ribosomal protein S6 [Cucurbita moschata] >XP_022974831.1 40S ribosomal protein S6 [Cucurbita maxima] >XP_023540275.1 40S ribosomal protein S6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 459.1 bits (1180), Expect = 9.3e-126
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKXXXXXXXXXXEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKRGRIAEKKKXXXXXXXXXXEYQKLLASRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKXXXXXXXXXXEYQKLLASRLKEQRERRSESLAKKRSRLS 240

Query: 241 AASKPSIAA 250
           AASKPSIAA
Sbjct: 241 AASKPSIAA 249

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BLAST of Carg20923 vs. NCBI nr
Match: XP_004133785.1 (PREDICTED: 40S ribosomal protein S6-like [Cucumis sativus] >KGN56379.1 hypothetical protein Csa_3G118140 [Cucumis sativus])

HSP 1 Score: 458.0 bits (1177), Expect = 2.1e-125
Identity = 248/249 (99.60%), Postives = 249/249 (100.00%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEV+GDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVAGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKXXXXXXXXXXEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKRGRIAEKKKXXXXXXXXXXEYQKLLASRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKXXXXXXXXXXEYQKLLASRLKEQRERRSESLAKKRSRLS 240

Query: 241 AASKPSIAA 250
           AASKPSIAA
Sbjct: 241 AASKPSIAA 249

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BLAST of Carg20923 vs. NCBI nr
Match: XP_022962357.1 (40S ribosomal protein S6-like [Cucurbita moschata] >XP_023547004.1 40S ribosomal protein S6-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 458.0 bits (1177), Expect = 2.1e-125
Identity = 248/249 (99.60%), Postives = 249/249 (100.00%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTK+GKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKXXXXXXXXXXEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKRGRIAEKKKXXXXXXXXXXEYQKLLASRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKXXXXXXXXXXEYQKLLASRLKEQRERRSESLAKKRSRLS 240

Query: 241 AASKPSIAA 250
           AASKPSIAA
Sbjct: 241 AASKPSIAA 249

[Close]

BLAST of Carg20923 vs. NCBI nr
Match: XP_008444852.1 (PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S6-like [Cucumis melo])

HSP 1 Score: 456.4 bits (1173), Expect = 6.0e-125
Identity = 237/249 (95.18%), Postives = 238/249 (95.58%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKXXXXXXXXXXEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKRGRIAEK K          EYQKLLASRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKXKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240

Query: 241 AASKPSIAA 250
           AASKPS+AA
Sbjct: 241 AASKPSVAA 249

[Close]

BLAST of Carg20923 vs. NCBI nr
Match: XP_022951611.1 (40S ribosomal protein S6-like [Cucurbita moschata] >XP_023002727.1 40S ribosomal protein S6-like [Cucurbita maxima] >XP_023538404.1 40S ribosomal protein S6-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 456.4 bits (1173), Expect = 6.0e-125
Identity = 246/249 (98.80%), Postives = 247/249 (99.20%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR+FTTKSGKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKXXXXXXXXXXEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKRGRIAEKKKXXXXXXXXX EYQKLLASRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKXXXXXXXXXAEYQKLLASRLKEQRERRSESLAKKRSRLS 240

Query: 241 AASKPSIAA 250
            ASKPSIAA
Sbjct: 241 TASKPSIAA 249

[Close]

BLAST of Carg20923 vs. TAIR10
Match: AT4G31700.1 (ribosomal protein S6)

HSP 1 Score: 422.2 bits (1084), Expect = 2.3e-118
Identity = 218/250 (87.20%), Postives = 229/250 (91.60%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFN+ANPTTGCQKKLEIDDDQKLRAF+DKRISQEVSGD+LGEEFKGYVFKI GGCDKQG
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIKGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRG+GRR GERRRKSVRGCIVS DLSVLNLVIVKKG+
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNL KEDDVR YVNTYRR FT K GK+VSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLKKEDDVRTYVNTYRRKFTNKKGKEVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKXXXXXXXXXXEYQKLLASRLKEQRERRSESLAKKRSRL- 240
           QRLVTPLTLQRKR RIA+KKK          +YQKLLASRLKEQR+RRSESLAKKRSRL 
Sbjct: 181 QRLVTPLTLQRKRARIADKKKKIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSRLS 240

Query: 241 SAASKPSIAA 250
           SAA+KPS+ A
Sbjct: 241 SAAAKPSVTA 250

[Close]

BLAST of Carg20923 vs. TAIR10
Match: AT5G10360.1 (Ribosomal protein S6e)

HSP 1 Score: 422.2 bits (1084), Expect = 2.3e-118
Identity = 217/249 (87.15%), Postives = 228/249 (91.57%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFN+ANPTTGCQKKLEIDDDQKLRAFFDKR+SQEVSGD+LGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDQKLRAFFDKRLSQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRG+GRR GERRRKSVRGCIVS DLSVLNLVIVKKG 
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGV 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180
           +DLPGLTDTEKPRMRGPKRASKIRKLFNL KEDDVRKYVNTYRR+FT K GKKVSKAPKI
Sbjct: 121 SDLPGLTDTEKPRMRGPKRASKIRKLFNLGKEDDVRKYVNTYRRTFTNKKGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKXXXXXXXXXXEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKR RIA+KKK          +YQKLLASRLKEQR+RRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRARIADKKKRIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSRLS 240

Query: 241 AASKPSIAA 250
           +A    +AA
Sbjct: 241 SAPAKPVAA 249

[Close]

BLAST of Carg20923 vs. Swiss-Prot
Match: sp|O48549|RS61_ARATH (40S ribosomal protein S6-1 OS=Arabidopsis thaliana OX=3702 GN=RPS6A PE=1 SV=2)

HSP 1 Score: 422.2 bits (1084), Expect = 4.1e-117
Identity = 218/250 (87.20%), Postives = 229/250 (91.60%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFN+ANPTTGCQKKLEIDDDQKLRAF+DKRISQEVSGD+LGEEFKGYVFKI GGCDKQG
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIKGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRG+GRR GERRRKSVRGCIVS DLSVLNLVIVKKG+
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNL KEDDVR YVNTYRR FT K GK+VSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLKKEDDVRTYVNTYRRKFTNKKGKEVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKXXXXXXXXXXEYQKLLASRLKEQRERRSESLAKKRSRL- 240
           QRLVTPLTLQRKR RIA+KKK          +YQKLLASRLKEQR+RRSESLAKKRSRL 
Sbjct: 181 QRLVTPLTLQRKRARIADKKKKIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSRLS 240

Query: 241 SAASKPSIAA 250
           SAA+KPS+ A
Sbjct: 241 SAAAKPSVTA 250

[Close]

BLAST of Carg20923 vs. Swiss-Prot
Match: sp|P51430|RS62_ARATH (40S ribosomal protein S6-2 OS=Arabidopsis thaliana OX=3702 GN=RPS6B PE=1 SV=3)

HSP 1 Score: 422.2 bits (1084), Expect = 4.1e-117
Identity = 217/249 (87.15%), Postives = 228/249 (91.57%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFN+ANPTTGCQKKLEIDDDQKLRAFFDKR+SQEVSGD+LGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDQKLRAFFDKRLSQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRG+GRR GERRRKSVRGCIVS DLSVLNLVIVKKG 
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGV 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180
           +DLPGLTDTEKPRMRGPKRASKIRKLFNL KEDDVRKYVNTYRR+FT K GKKVSKAPKI
Sbjct: 121 SDLPGLTDTEKPRMRGPKRASKIRKLFNLGKEDDVRKYVNTYRRTFTNKKGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKXXXXXXXXXXEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKR RIA+KKK          +YQKLLASRLKEQR+RRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRARIADKKKRIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSRLS 240

Query: 241 AASKPSIAA 250
           +A    +AA
Sbjct: 241 SAPAKPVAA 249

[Close]

BLAST of Carg20923 vs. Swiss-Prot
Match: sp|Q9M3V8|RS6_ASPOF (40S ribosomal protein S6 OS=Asparagus officinalis OX=4686 GN=rps6 PE=2 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 1.9e-114
Identity = 224/243 (92.18%), Postives = 230/243 (94.65%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAF+DKRISQEVSGD+LGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVS DLSVLNLVIVKKG+
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180
           NDLPGLTD EKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR+FT K GK  SKAPKI
Sbjct: 121 NDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTNKKGKTCSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKXXXXXXXXXXEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKR RIAE   XXXXXXXXXX   KLLASRLKEQR+RRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRARIAEXXXXXXXXXXXXXXXXKLLASRLKEQRDRRSESLAKKRSRLS 240

Query: 241 AAS 244
           AA+
Sbjct: 241 AAA 243

[Close]

BLAST of Carg20923 vs. Swiss-Prot
Match: sp|P29345|RS6_TOBAC (40S ribosomal protein S6 (Fragment) OS=Nicotiana tabacum OX=4097 GN=RPS6 PE=2 SV=2)

HSP 1 Score: 302.4 bits (773), Expect = 4.7e-81
Identity = 168/204 (82.35%), Postives = 175/204 (85.78%), Query Frame = 0


Query: 46  KGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVS 105
           KGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLL+RGTPCFRGYGRRNGERRRKSVRGCIVS
Sbjct: 1   KGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLYRGTPCFRGYGRRNGERRRKSVRGCIVS 60

Query: 106 QDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRS 165
            DLSVLNLVIVKKG+NDLPGLTDTEKPRMRGP+   +   L+   KEDDVRKYVNT    
Sbjct: 61  PDLSVLNLVIVKKGENDLPGLTDTEKPRMRGPREPQRSEALY--FKEDDVRKYVNT-TAE 120

Query: 166 FTTKSGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKXXXXXXXXXXEYQKLLASRLKEQR 225
           FTTK   K SKAPKIQRLVTPLTLQRKR RIA+KKK          EYQKLLASRLKEQR
Sbjct: 121 FTTK--WKGSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKSEAAEYQKLLASRLKEQR 180

Query: 226 ERRSESLAKKRSRLSAASKPSIAA 250
           E+RSESLAKKRSRLSAASKPSIAA
Sbjct: 181 EKRSESLAKKRSRLSAASKPSIAA 199

[Close]

BLAST of Carg20923 vs. Swiss-Prot
Match: sp|Q9BMX5|RS6_APLCA (40S ribosomal protein S6 OS=Aplysia californica OX=6500 GN=RPS6 PE=2 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 3.6e-73
Identity = 149/229 (65.07%), Postives = 174/229 (75.98%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MK NI+ P TGCQK +E+DD++KLR F+DKRIS E+S D LG+E+KGYV +I GG DKQG
Sbjct: 1   MKLNISYPATGCQKLIEVDDEKKLRPFYDKRISAELSADCLGDEWKGYVVRISGGNDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLT  RVRLLL +   C+R   RR GER+RKSVRGCIV  +LSVL+LVI+KKG+
Sbjct: 61  FPMKQGVLTATRVRLLLDKNHSCYR--PRRTGERKRKSVRGCIVDSNLSVLSLVIIKKGE 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKV-SKAPK 180
            D+PGLTD   PR  GPKRASKIRKLFNLSKEDDVR+YV   RR    + GKK  SKAPK
Sbjct: 121 QDIPGLTDKTIPRRLGPKRASKIRKLFNLSKEDDVRQYV--VRRPLPERDGKKAKSKAPK 180

Query: 181 IQRLVTPLTLQRKRGRIAEKKKXXXXXXXXXXEYQKLLASRLKEQRERR 229
           IQRLVTP+ LQRKR R+A KKK          EY KLLA R+KE +ER+
Sbjct: 181 IQRLVTPVVLQRKRARMALKKKRVTKKREDHAEYTKLLAQRMKEAKERK 225

[Close]

BLAST of Carg20923 vs. TrEMBL
Match: tr|A0A0A0L5R5|A0A0A0L5R5_CUCSA (40S ribosomal protein S6 OS=Cucumis sativus OX=3659 GN=Csa_3G118140 PE=3 SV=1)

HSP 1 Score: 458.0 bits (1177), Expect = 1.4e-125
Identity = 248/249 (99.60%), Postives = 249/249 (100.00%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEV+GDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVAGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKXXXXXXXXXXEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKRGRIAEKKKXXXXXXXXXXEYQKLLASRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKXXXXXXXXXXEYQKLLASRLKEQRERRSESLAKKRSRLS 240

Query: 241 AASKPSIAA 250
           AASKPSIAA
Sbjct: 241 AASKPSIAA 249

[Close]

BLAST of Carg20923 vs. TrEMBL
Match: tr|A0A1S3BC73|A0A1S3BC73_CUCME (40S ribosomal protein S6 OS=Cucumis melo OX=3656 GN=LOC103488074 PE=3 SV=1)

HSP 1 Score: 456.4 bits (1173), Expect = 4.0e-125
Identity = 237/249 (95.18%), Postives = 238/249 (95.58%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKXXXXXXXXXXEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKRGRIAEK K          EYQKLLASRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKXKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240

Query: 241 AASKPSIAA 250
           AASKPS+AA
Sbjct: 241 AASKPSVAA 249

[Close]

BLAST of Carg20923 vs. TrEMBL
Match: tr|A0A0A0LL90|A0A0A0LL90_CUCSA (40S ribosomal protein S6 OS=Cucumis sativus OX=3659 GN=Csa_2G369060 PE=3 SV=1)

HSP 1 Score: 455.3 bits (1170), Expect = 8.9e-125
Identity = 236/249 (94.78%), Postives = 239/249 (95.98%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180
           NDLPGLTD+EKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTK+GKKVSKAPKI
Sbjct: 121 NDLPGLTDSEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKXXXXXXXXXXEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKRGRIAEKKK          EYQKLL+SRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLSSRLKEQRERRSESLAKKRSRLS 240

Query: 241 AASKPSIAA 250
           AASKPSIAA
Sbjct: 241 AASKPSIAA 249

[Close]

BLAST of Carg20923 vs. TrEMBL
Match: tr|A0A1U8HYU1|A0A1U8HYU1_GOSHI (40S ribosomal protein S6 OS=Gossypium hirsutum OX=3635 GN=LOC107888821 PE=3 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 2.6e-124
Identity = 235/249 (94.38%), Postives = 238/249 (95.58%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGD+LGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKG+
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGE 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR+FTTKSGKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKXXXXXXXXXXEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKRGRIAEKKK          EYQKLLA RLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRVAKAKADAAEYQKLLAQRLKEQRERRSESLAKKRSRLS 240

Query: 241 AASKPSIAA 250
           AASKPSIAA
Sbjct: 241 AASKPSIAA 249

[Close]

BLAST of Carg20923 vs. TrEMBL
Match: tr|A0A0B0MIQ0|A0A0B0MIQ0_GOSAR (40S ribosomal protein S6 OS=Gossypium arboreum OX=29729 GN=F383_17949 PE=3 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 2.6e-124
Identity = 235/249 (94.38%), Postives = 238/249 (95.58%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGD+LGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKG+
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGE 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR+FTTKSGKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKXXXXXXXXXXEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKRGRIAEKKK          EYQKLLA RLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRVAKAKADAAEYQKLLAQRLKEQRERRSESLAKKRSRLS 240

Query: 241 AASKPSIAA 250
           AASKPSIAA
Sbjct: 241 AASKPSIAA 249

The following BLAST results are available for this feature:

BLAST of Carg20923 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022948606.1	9.3e-126	100.00	40S ribosomal protein S6 [Cucurbita moschata] >XP_022974831.1 40S ribosomal prot...	[more]
XP_004133785.1	2.1e-125	99.60	PREDICTED: 40S ribosomal protein S6-like [Cucumis sativus] >KGN56379.1 hypotheti...	[more]
XP_022962357.1	2.1e-125	99.60	40S ribosomal protein S6-like [Cucurbita moschata] >XP_023547004.1 40S ribosomal...	[more]
XP_008444852.1	6.0e-125	95.18	PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S6-like [Cucumis melo]	[more]
XP_022951611.1	6.0e-125	98.80	40S ribosomal protein S6-like [Cucurbita moschata] >XP_023002727.1 40S ribosomal...	[more]

BLAST of Carg20923 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G31700.1	2.3e-118	87.20	ribosomal protein S6	[more]
AT5G10360.1	2.3e-118	87.15	Ribosomal protein S6e	[more]

BLAST of Carg20923 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O48549\|RS61_ARATH	4.1e-117	87.20	40S ribosomal protein S6-1 OS=Arabidopsis thaliana OX=3702 GN=RPS6A PE=1 SV=2	[more]
sp\|P51430\|RS62_ARATH	4.1e-117	87.15	40S ribosomal protein S6-2 OS=Arabidopsis thaliana OX=3702 GN=RPS6B PE=1 SV=3	[more]
sp\|Q9M3V8\|RS6_ASPOF	1.9e-114	92.18	40S ribosomal protein S6 OS=Asparagus officinalis OX=4686 GN=rps6 PE=2 SV=1	[more]
sp\|P29345\|RS6_TOBAC	4.7e-81	82.35	40S ribosomal protein S6 (Fragment) OS=Nicotiana tabacum OX=4097 GN=RPS6 PE=2 SV...	[more]
sp\|Q9BMX5\|RS6_APLCA	3.6e-73	65.07	40S ribosomal protein S6 OS=Aplysia californica OX=6500 GN=RPS6 PE=2 SV=1	[more]

BLAST of Carg20923 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L5R5\|A0A0A0L5R5_CUCSA	1.4e-125	99.60	40S ribosomal protein S6 OS=Cucumis sativus OX=3659 GN=Csa_3G118140 PE=3 SV=1	[more]
tr\|A0A1S3BC73\|A0A1S3BC73_CUCME	4.0e-125	95.18	40S ribosomal protein S6 OS=Cucumis melo OX=3656 GN=LOC103488074 PE=3 SV=1	[more]
tr\|A0A0A0LL90\|A0A0A0LL90_CUCSA	8.9e-125	94.78	40S ribosomal protein S6 OS=Cucumis sativus OX=3659 GN=Csa_2G369060 PE=3 SV=1	[more]
tr\|A0A1U8HYU1\|A0A1U8HYU1_GOSHI	2.6e-124	94.38	40S ribosomal protein S6 OS=Gossypium hirsutum OX=3635 GN=LOC107888821 PE=3 SV=1	[more]
tr\|A0A0B0MIQ0\|A0A0B0MIQ0_GOSAR	2.6e-124	94.38	40S ribosomal protein S6 OS=Gossypium arboreum OX=29729 GN=F383_17949 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular
GO:0005840	ribosome

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **INTERPRO**
Term	Definition
IPR018282	Ribosomal_S6e_CS
IPR014401	Ribosomal_S6_euk
IPR001377	Ribosomal_S6e

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005622	intracellular
molecular_function	GO:0003735	structural constituent of ribosome

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg20923-RA	Carg20923-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 189..216
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 222..237
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 222..249
None	No IPR available	PANTHER	PTHR11502:SF13	SUBFAMILY NOT NAMED	coord: 1..245
IPR001377	Ribosomal protein S6e	SMART	SM01405	Ribosomal_S6e_2	coord: 1..128 e-value: 2.0E-81 score: 286.5
IPR001377	Ribosomal protein S6e	PFAM	PF01092	Ribosomal_S6e	coord: 1..128 e-value: 5.3E-58 score: 194.3
IPR001377	Ribosomal protein S6e	PANTHER	PTHR11502	40S RIBOSOMAL PROTEIN S6	coord: 1..245
IPR014401	Ribosomal protein S6, eukaryotic	PIRSF	PIRSF002129	RPS6e	coord: 1..249 e-value: 4.7E-119 score: 394.1
IPR018282	Ribosomal protein S6e, conserved site	PROSITE	PS00578	RIBOSOMAL_S6E	coord: 52..63

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg20923	Cla021113	Watermelon (97103) v1	carwmB0992
Carg20923	Csa3G118140	Cucumber (Chinese Long) v2	carcuB1007
Carg20923	MELO3C005983	Melon (DHL92) v3.5.1	carmeB0968
Carg20923	ClCG05G000450	Watermelon (Charleston Gray)	carwcgB0968
Carg20923	CSPI03G07490	Wild cucumber (PI 183967)	carcpiB1031
Carg20923	Cucsa.259660	Cucumber (Gy14) v1	carcgyB1110
Carg20923	CmaCh06G009970	Cucurbita maxima (Rimu)	carcmaB1376
Carg20923	CmoCh06G010070	Cucurbita moschata (Rifu)	carcmoB1332
Carg20923	Lsi05G021760	Bottle gourd (USVL1VR-Ls)	carlsiB907
Carg20923	Cp4.1LG08g00580	Cucurbita pepo (Zucchini)	carcpeB1380
Carg20923	CsGy3G007610	Cucumber (Gy14) v2	carcgybB0980
Carg20923	MELO3C005983.2	Melon (DHL92) v3.6.1	carmedB0978
Carg20923	CsaV3_3G007620	Cucumber (Chinese Long) v3	carcucB1037
Carg20923	Cla97C05G080440	Watermelon (97103) v2	carwmbB1047

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg20923	Wax gourd	carwgoB1162
Carg20923	Cucurbita maxima (Rimu)	carcmaB1371
Carg20923	Cucurbita maxima (Rimu)	carcmaB1373
Carg20923	Cucurbita moschata (Rifu)	carcmoB1330
Carg20923	Cucurbita pepo (Zucchini)	carcpeB1379