Cucsa.256810 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.256810
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	At5g17610
Location	scaffold02229 : 4312531 .. 4314599 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGGGAATGTGAATTTGATCAACAACGATGGAAGTCAACAATTCTTCGAGAAATTCAAAGCTTCTCAACACACTCAAACCCTTGATCCTTCTAGGGTTAATCTTCTCATTGCTCACTACCCATACAGTTCTCGCCAAATCTCGCCGTCCAGTCACTGTAAGTTTTGTTTGTTCCTCTTCTCGGATCGTGATTTTCTTCATCTTCACTTGATTCTATCGAATTGTATTTCAATTATTCAGGATGCTGAAACCCGGCAAAAGAAGCAGGAGTGTTACGCCGATATCGAGAGGTTAGCGTTTACTTCAAGCTATTTtAGGGTTTTTTTTtAGTGTACCTGGAAAATGTAATCTCTCCTTTTTTTTtATCATACCTGCTACTGCTTTGATTGGTTATGATAATTTGTTGAAAATGTGCAGTGGATTGTGGGGTTGGCAATGCAGATCTTCAACTACCGAAAAGGAAAATTGTGCCCTGCGATGTCTTTCTCCTACTTGTTACGATCTAGTTTATGGTAGTGATCCGGTGAGATTATGTTTTTTTTtATTGTTTTGTGCTCATATTTCTCTGGCTGTTCTTCTTTAATTGATCAGTGAATGAGTTTAACGTTGGATTTGTGTTGATGTAGCTCGAGGAAGGAGAGAAGGACCTTGCTAGGAGTCAAGAGTACAAGTATTGTATATATAAGTAAGTAGAGTATTTTTGTTCAATTTTCCAGAAAAGAAAGTTGATTATTTCTTATATGAAATATTGGTTTGCTGTCCGGAACTAGACATGGGTCGTTTTGGCTGTTACTTTCAATTTCATTCTTTTCACCGTTCACTTCGTCCTCCAACCATTTGAATAGGAATTTGGAAATGTTTTTGCGTGGTTCACTAGTTCATGTAATACGTTCTCTATCCAGTCTTCAAATGCTATATCATCAGAATAGAGTTTGTTTGCAAGGATCTTTGAATCTGGCCACTGGTTATATTCTGGTTGCTTCTTAAATCATGGGGGAGCTATAATGTATAAATCACTCTGCATATCTTATATGCTTTGAAGTTCTACTAAATCGGAGATCTCACACCATGTTTAGTTCCACTGTGAAATTTTTAACCATTCGAGAATCAAAATGGTATCCTATTATTTCCTCACTTGCTTCCTTCCCCCTTTCTGTGCTTACAAGGAACTAAAGCTGCACAGTTGAATCTGAATCATCTGACCATTAGTGTATAACTTGCTAGAGGATTTGCTATCTTTCTATAGGCCTTGTTGAATGTGTGTTTAATCATTTGGGATCTAAGGTGCTTTTGCATATTGTTGCCCCCATTCCTCAACGCAACCCTTTCCAATACTTCTCTTCCCTTCGTTTCCAAAGGAGTATTAAGCAAGAAGAGTATTTCACCGTACGAAATTTCTGGAGCAGGATCTGTTCTGAAGGTTTTACAACTGTATCCTTGAGTTCTAATTAGTAGAGTGTTCCTTGTCTGGTTGAGCTCTATAATAGATGTTTTTCATCTATTTGTCATTTCAGTTAGGTTTGTGCATCCAGAGGAGATTAGTCGAGAGAAACTTTTTGAAAGTACCATACATGTATCTCGATCTAATTGATTACAGTCAATTATAGTTCAGTTTCAATTTATATTTGAAAGAAAACATAACATTAATGAACCAACCTTACAGACCTTCAGTATTTGGGATTTGTTGAATTTAAAGTGTGAAATCATTGTTTGGTTGCAGGTTGTCAATGGGGGAGAGTCTAGAGGGTATTAAGGGATCCTTTGACTACTGATGTTTTTGAAGATTGTCTGTGCTATTTAACTGTCTGATGTTCCATTATGCCCTGTCCTTCTGACTGCCTTTTAGCATTTGGGTCAAAATATAAGGTACAATTCCATAATCCCCAGTTCATATTTTTCTTCCTTTCTCTCTCTTTCTCTCCACATTAAATCGAGAAATATGATTACAGCAACAAAGGAATGAAAAGCTTGGAATGGAAATGGCAACTACTTATAAAAAaTTCAATTAATGAGTGCAACTTTAACCTTTTCTTAAGTAGATTACAATAGTTTGAATTGCAAATTTAGGCC

mRNA sequence

GGGGGAATGTGAATTTGATCAACAACGATGGAAGTCAACAATTCTTCGAGAAATTCAAAGCTTCTCAACACACTCAAACCCTTGATCCTTCTAGGGTTAATCTTCTCATTGCTCACTACCCATACAGTTCTCGCCAAATCTCGCCGTCCAGTCACTGATGCTGAAACCCGGCAAAAGAAGCAGGAGTGTTACGCCGATATCGAGAGTGGATTGTGGGGTTGGCAATGCAGATCTTCAACTACCGAAAAGGAAAATTGTGCCCTGCGATGTCTTTCTCCTACTTGTTACGATCTAGTTTATGGTAGTGATCCGCTCGAGGAAGGAGAGAAGGACCTTGCTAGGAGTCAAGAGTACAAGTATTGTATATATAAGTTGTCAATGGGGGAGAGTCTAGAGGGTATTAAGGGATCCTTTGACTACTGATGTTTTTGAAGATTGTCTGTGCTATTTAACTGTCTGATGTTCCATTATGCCCTGTCCTTCTGACTGCCTTTTAGCATTTGGGTCAAAATATAAGGTACAATTCCATAATCCCCAGTTCATATTTTTCTTCCTTTCTCTCTCTTTCTCTCCACATTAAATCGAGAAATATGATTACAGCAACAAAGGAATGAAAAGCTTGGAATGGAAATGGCAACTACTTATAAAAAATTCAATTAATGAGTGCAACTTTAACCTTTTCTTAAGTAGATTACaatagtttgaattgcaaatttaggcc

Coding sequence (CDS)

ATGGAAGTCAACAATTCTTCGAGAAATTCAAAGCTTCTCAACACACTCAAACCCTTGATCCTTCTAGGGTTAATCTTCTCATTGCTCACTACCCATACAGTTCTCGCCAAATCTCGCCGTCCAGTCACTGATGCTGAAACCCGGCAAAAGAAGCAGGAGTGTTACGCCGATATCGAGAGTGGATTGTGGGGTTGGCAATGCAGATCTTCAACTACCGAAAAGGAAAATTGTGCCCTGCGATGTCTTTCTCCTACTTGTTACGATCTAGTTTATGGTAGTGATCCGCTCGAGGAAGGAGAGAAGGACCTTGCTAGGAGTCAAGAGTACAAGTATTGTATATATAAGTTGTCAATGGGGGAGAGTCTAGAGGGTATTAAGGGATCCTTTGACTACTGA

Protein sequence

MEVNNSSRNSKLLNTLKPLILLGLIFSLLTTHTVLAKSRRPVTDAETRQKKQECYADIESGLWGWQCRSSTTEKENCALRCLSPTCYDLVYGSDPLEEGEKDLARSQEYKYCIYKLSMGESLEGIKGSFDY*

Homology

[Close]

BLAST of Cucsa.256810 vs. TrEMBL
Match: A0A0A0L9A0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G129480 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 8.9e-70
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 1


Query: 1   MEVNNSSRNSKLLNTLKPLILLGLIFSLLTTHTVLAKSRRPVTDAETRQKKQECYADIES 60
           MEVNNSSRNSKLLNTLKPLILLGLIFSLLTTHTVLAKSRRPVTDAETRQKKQECYADIES
Sbjct: 1   MEVNNSSRNSKLLNTLKPLILLGLIFSLLTTHTVLAKSRRPVTDAETRQKKQECYADIES 60

Query: 61  GLWGWQCRSSTTEKENCALRCLSPTCYDLVYGSDPLEEGEKDLARSQEYKYCIYKLSMGE 120
           GLWGWQCRSSTTEKENCALRCLSPTCYDLVYGSDPLEEGEKDLARSQEYKYCIYKLSMGE
Sbjct: 61  GLWGWQCRSSTTEKENCALRCLSPTCYDLVYGSDPLEEGEKDLARSQEYKYCIYKLSMGE 120

Query: 121 SLEGIKGSFDY 132
           SLEGIKGSFDY
Sbjct: 121 SLEGIKGSFDY 131

[Close]

BLAST of Cucsa.256810 vs. TrEMBL
Match: A0A061F0A2_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_025702 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 4.6e-42
Identity = 84/123 (68.29%), Postives = 100/123 (81.30%), Query Frame = 1


Query: 9   NSKLLNTLKPLILLGLIFSLLTTHTVLAKSRRPVTDAETRQKKQECYADIESGLWGWQCR 68
           N   L  L  L+LL L+ S     TVLAKSR P+TD+ET++KK ECYADIESGLWG QC+
Sbjct: 3   NKSNLPVLNILLLLILLASSNFLPTVLAKSRNPITDSETKKKKSECYADIESGLWGEQCK 62

Query: 69  SSTTEKENCALRCLSPTCYDLVYGSDPLEEGEKDLARSQEYKYCIYKLSMGESLEGIKGS 128
           SS+  KENCAL+CLSP CY+L+Y SDPLEEGEKD  RSQE+KYC+YKLS+GESLEG+KG+
Sbjct: 63  SSSIAKENCALKCLSPACYELIYESDPLEEGEKDFIRSQEFKYCMYKLSLGESLEGVKGT 122

Query: 129 FDY 132
           FDY
Sbjct: 123 FDY 125

[Close]

BLAST of Cucsa.256810 vs. TrEMBL
Match: V4TLA5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033075mg PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 5.1e-41
Identity = 85/114 (74.56%), Postives = 96/114 (84.21%), Query Frame = 1


Query: 19  LILLGLIFS-LLTTHTVLAKSRRPVTDAETRQKKQECYADIESGLWGWQCRSSTTEKENC 78
           LILL LI S LL    VLAKSRRP++D E RQKK +CYAD+ESGLWG QC+SS   KENC
Sbjct: 13  LILLLLIASTLLFASPVLAKSRRPISDIEVRQKKMDCYADVESGLWGPQCKSSMIAKENC 72

Query: 79  ALRCLSPTCYDLVYGSDPLEEGEKDLARSQEYKYCIYKLSMGESLEGIKGSFDY 132
           ALRCLSPTCY+ VY SDPLEEGEKD  RSQE+KYC++KLS+GESLEGI+GSFDY
Sbjct: 73  ALRCLSPTCYEFVYESDPLEEGEKDFVRSQEFKYCMHKLSLGESLEGIRGSFDY 126

[Close]

BLAST of Cucsa.256810 vs. TrEMBL
Match: R0HGJ0_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10003646mg PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 6.6e-41
Identity = 83/111 (74.77%), Postives = 94/111 (84.68%), Query Frame = 1


Query: 19  LILLGLIFSLLTTHTVLAKSRRPVTDAETRQKKQECYADIESGLWGWQCRSSTTEKENCA 78
           L+LL L F LL+   VLAKS RP++D E RQKK ECYADIESGLWGWQC SS   KENCA
Sbjct: 13  LLLLILSFCLLSC--VLAKSPRPISDVEIRQKKNECYADIESGLWGWQCISSAIAKENCA 72

Query: 79  LRCLSPTCYDLVYGSDPLEEGEKDLARSQEYKYCIYKLSMGESLEGIKGSF 130
           LRCLSP CY+L+Y SDPLEEGEKDL RSQEYKYC+YKLS+GESL+G++GSF
Sbjct: 73  LRCLSPVCYELIYESDPLEEGEKDLIRSQEYKYCMYKLSLGESLDGVRGSF 121

[Close]

BLAST of Cucsa.256810 vs. TrEMBL
Match: D7U635_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0107g00240 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 8.7e-41
Identity = 78/113 (69.03%), Postives = 96/113 (84.96%), Query Frame = 1


Query: 19  LILLGLIFSLLTTHTVLAKSRRPVTDAETRQKKQECYADIESGLWGWQCRSSTTEKENCA 78
           L+LL ++ S   +  VL+KSRRP++D+E R+KK ECYADIESGLWGWQC+SS   KENC 
Sbjct: 19  LLLLAVLLSFAPS-PVLSKSRRPISDSEIREKKNECYADIESGLWGWQCKSSVIAKENCV 78

Query: 79  LRCLSPTCYDLVYGSDPLEEGEKDLARSQEYKYCIYKLSMGESLEGIKGSFDY 132
           L+CLSP CY+LVY SDPLEEGEKD  RSQEYKYC+++LS+GESL+G+KGSFDY
Sbjct: 79  LQCLSPPCYELVYESDPLEEGEKDFTRSQEYKYCMHRLSLGESLDGVKGSFDY 130

[Close]

BLAST of Cucsa.256810 vs. TAIR10
Match: AT5G17610.1 (AT5G17610.1 unknown protein)

HSP 1 Score: 167.5 bits (423), Expect = 5.4e-42
Identity = 76/109 (69.72%), Postives = 87/109 (79.82%), Query Frame = 1


Query: 21  LLGLIFSLLTTHTVLAKSRRPVTDAETRQKKQECYADIESGLWGWQCRSSTTEKENCALR 80
           LL L+ S+     V +KS RP++D E RQKK ECY DIESGLWGWQC+SS   KENCALR
Sbjct: 13  LLLLLLSMCFVPCVFSKSPRPISDVEIRQKKSECYGDIESGLWGWQCKSSAIAKENCALR 72

Query: 81  CLSPTCYDLVYGSDPLEEGEKDLARSQEYKYCIYKLSMGESLEGIKGSF 130
           CLSP CY L+Y SDPLEEGEKDL RSQEYKYC+YK S+GESLEG++G F
Sbjct: 73  CLSPVCYQLIYESDPLEEGEKDLIRSQEYKYCMYKSSLGESLEGVRGIF 121

[Close]

BLAST of Cucsa.256810 vs. NCBI nr
Match: gi|449432364|ref|XP_004133969.1| (PREDICTED: uncharacterized protein LOC101207062 [Cucumis sativus])

HSP 1 Score: 270.8 bits (691), Expect = 1.3e-69
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 1


Query: 1   MEVNNSSRNSKLLNTLKPLILLGLIFSLLTTHTVLAKSRRPVTDAETRQKKQECYADIES 60
           MEVNNSSRNSKLLNTLKPLILLGLIFSLLTTHTVLAKSRRPVTDAETRQKKQECYADIES
Sbjct: 1   MEVNNSSRNSKLLNTLKPLILLGLIFSLLTTHTVLAKSRRPVTDAETRQKKQECYADIES 60

Query: 61  GLWGWQCRSSTTEKENCALRCLSPTCYDLVYGSDPLEEGEKDLARSQEYKYCIYKLSMGE 120
           GLWGWQCRSSTTEKENCALRCLSPTCYDLVYGSDPLEEGEKDLARSQEYKYCIYKLSMGE
Sbjct: 61  GLWGWQCRSSTTEKENCALRCLSPTCYDLVYGSDPLEEGEKDLARSQEYKYCIYKLSMGE 120

Query: 121 SLEGIKGSFDY 132
           SLEGIKGSFDY
Sbjct: 121 SLEGIKGSFDY 131

[Close]

BLAST of Cucsa.256810 vs. NCBI nr
Match: gi|659075702|ref|XP_008438284.1| (PREDICTED: uncharacterized protein LOC103483444 [Cucumis melo])

HSP 1 Score: 267.3 bits (682), Expect = 1.4e-68
Identity = 128/131 (97.71%), Postives = 130/131 (99.24%), Query Frame = 1


Query: 1   MEVNNSSRNSKLLNTLKPLILLGLIFSLLTTHTVLAKSRRPVTDAETRQKKQECYADIES 60
           MEVNNSS+NSKLLNTLKPLILLG IFSLLTTHTV+AKSRRPVTDAETRQKKQECYADIES
Sbjct: 1   MEVNNSSKNSKLLNTLKPLILLGFIFSLLTTHTVIAKSRRPVTDAETRQKKQECYADIES 60

Query: 61  GLWGWQCRSSTTEKENCALRCLSPTCYDLVYGSDPLEEGEKDLARSQEYKYCIYKLSMGE 120
           GLWGWQCRSSTTEKENCALRCLSPTCYDLVYGSDPLEEGEKDLARSQEYKYCIYKLSMGE
Sbjct: 61  GLWGWQCRSSTTEKENCALRCLSPTCYDLVYGSDPLEEGEKDLARSQEYKYCIYKLSMGE 120

Query: 121 SLEGIKGSFDY 132
           SLEGIKGSFDY
Sbjct: 121 SLEGIKGSFDY 131

[Close]

BLAST of Cucsa.256810 vs. NCBI nr
Match: gi|764629331|ref|XP_011469420.1| (PREDICTED: uncharacterized protein LOC105352952 [Fragaria vesca subsp. vesca])

HSP 1 Score: 183.3 bits (464), Expect = 2.7e-43
Identity = 88/128 (68.75%), Postives = 107/128 (83.59%), Query Frame = 1


Query: 4   NNSSRNSKLLNTLKPLILLGLIFSLLTTHTVLAKSRRPVTDAETRQKKQECYADIESGLW 63
           N+SS +S L   ++ L++L L+FS +    VLAKSRRP+TD ETRQKK +CYADIESGLW
Sbjct: 5   NSSSPSSPL--RIQILLVLSLLFSPI----VLAKSRRPITDIETRQKKAQCYADIESGLW 64

Query: 64  GWQCRSSTTEKENCALRCLSPTCYDLVYGSDPLEEGEKDLARSQEYKYCIYKLSMGESLE 123
           GWQC+SS   KENC L+CLSPTCY++VY SDPLEEGEKDL R QE+KYC++KLS+GESLE
Sbjct: 65  GWQCKSSMIAKENCVLKCLSPTCYEIVYESDPLEEGEKDLVRGQEFKYCMHKLSLGESLE 124

Query: 124 GIKGSFDY 132
           GIKGSF+Y
Sbjct: 125 GIKGSFNY 126

[Close]

BLAST of Cucsa.256810 vs. NCBI nr
Match: gi|645252399|ref|XP_008232105.1| (PREDICTED: uncharacterized protein LOC103331271 [Prunus mume])

HSP 1 Score: 179.9 bits (455), Expect = 3.0e-42
Identity = 89/129 (68.99%), Postives = 104/129 (80.62%), Query Frame = 1


Query: 3   VNNSSRNSKLLNTLKPLILLGLIFSLLTTHTVLAKSRRPVTDAETRQKKQECYADIESGL 62
           VN  S +S  L    P++L  L+  LL + TVLAKSRRP++D ETRQKK +CYADIESGL
Sbjct: 2   VNQHSSSSSSLGI--PVLLFLLL--LLLSPTVLAKSRRPISDFETRQKKNQCYADIESGL 61

Query: 63  WGWQCRSSTTEKENCALRCLSPTCYDLVYGSDPLEEGEKDLARSQEYKYCIYKLSMGESL 122
           WGWQC+SS   KENCALRCLS TCY+LVY SDPLEEG KDL R QE+KYC++KLS+GESL
Sbjct: 62  WGWQCKSSLIAKENCALRCLSSTCYELVYESDPLEEGGKDLVRGQEFKYCMHKLSLGESL 121

Query: 123 EGIKGSFDY 132
           EGIKGSF+Y
Sbjct: 122 EGIKGSFNY 126

[Close]

BLAST of Cucsa.256810 vs. NCBI nr
Match: gi|694397148|ref|XP_009373835.1| (PREDICTED: uncharacterized protein LOC103962790 [Pyrus x bretschneideri])

HSP 1 Score: 179.1 bits (453), Expect = 5.0e-42
Identity = 83/126 (65.87%), Postives = 103/126 (81.75%), Query Frame = 1


Query: 6   SSRNSKLLNTLKPLILLGLIFSLLTTHTVLAKSRRPVTDAETRQKKQECYADIESGLWGW 65
           +++NS   + L+ LILL L+F L +     AKS RP++D ETRQKK +CYADIESGLWGW
Sbjct: 2   TNQNSSSSSPLRILILL-LVFLLFSPTNTNAKSHRPISDMETRQKKSQCYADIESGLWGW 61

Query: 66  QCRSSTTEKENCALRCLSPTCYDLVYGSDPLEEGEKDLARSQEYKYCIYKLSMGESLEGI 125
            C+SS   KENCALRCLSPTCY+L+Y SDPLEEGEKD+ R QE+KYC++KLS+GESLEGI
Sbjct: 62  HCKSSLIAKENCALRCLSPTCYELIYESDPLEEGEKDMIRGQEFKYCMHKLSLGESLEGI 121

Query: 126 KGSFDY 132
           KG+F+Y
Sbjct: 122 KGTFNY 126

The following BLAST results are available for this feature:

BLAST of Cucsa.256810 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L9A0_CUCSA	8.9e-70	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G129480 PE=4 SV=1	[more]
A0A061F0A2_THECC	4.6e-42	68.29	Uncharacterized protein OS=Theobroma cacao GN=TCM_025702 PE=4 SV=1	[more]
V4TLA5_9ROSI	5.1e-41	74.56	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033075mg PE=4 SV=1	[more]
R0HGJ0_9BRAS	6.6e-41	74.77	Uncharacterized protein OS=Capsella rubella GN=CARUB_v10003646mg PE=4 SV=1	[more]
D7U635_VITVI	8.7e-41	69.03	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0107g00240 PE=4 SV=...	[more]

BLAST of Cucsa.256810 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G17610.1	5.4e-42	69.72	unknown protein	[more]

BLAST of Cucsa.256810 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449432364\|ref\|XP_004133969.1\|	1.3e-69	100.00	PREDICTED: uncharacterized protein LOC101207062 [Cucumis sativus]	[more]
gi\|659075702\|ref\|XP_008438284.1\|	1.4e-68	97.71	PREDICTED: uncharacterized protein LOC103483444 [Cucumis melo]	[more]
gi\|764629331\|ref\|XP_011469420.1\|	2.7e-43	68.75	PREDICTED: uncharacterized protein LOC105352952 [Fragaria vesca subsp. vesca]	[more]
gi\|645252399\|ref\|XP_008232105.1\|	3.0e-42	68.99	PREDICTED: uncharacterized protein LOC103331271 [Prunus mume]	[more]
gi\|694397148\|ref\|XP_009373835.1\|	5.0e-42	65.87	PREDICTED: uncharacterized protein LOC103962790 [Pyrus x bretschneideri]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.256810.1	Cucsa.256810.1	mRNA
Cucsa.256810.2	Cucsa.256810.2	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35455	FAMILY NOT NAMED	coord: 12..97 score: 7.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.256810	Cla021384	Watermelon (97103) v1	cgywmB479
Cucsa.256810	Csa3G129480	Cucumber (Chinese Long) v2	cgycuB366
Cucsa.256810	MELO3C006276	Melon (DHL92) v3.5.1	cgymeB439
Cucsa.256810	ClCG05G002970	Watermelon (Charleston Gray)	cgywcgB451
Cucsa.256810	CSPI03G10400	Wild cucumber (PI 183967)	cgycpiB383
Cucsa.256810	CmaCh14G019260	Cucurbita maxima (Rimu)	cgycmaB0709
Cucsa.256810	CmoCh14G019810	Cucurbita moschata (Rifu)	cgycmoB0700
Cucsa.256810	Lsi05G018820	Bottle gourd (USVL1VR-Ls)	cgylsiB415
Cucsa.256810	MELO3C006276.2	Melon (DHL92) v3.6.1	cgymedB432
Cucsa.256810	CsaV3_3G010550	Cucumber (Chinese Long) v3	cgycucB387
Cucsa.256810	Cla97C05G083570	Watermelon (97103) v2	cgywmbB452
Cucsa.256810	Bhi01G000127	Wax gourd	cgywgoB523
Cucsa.256810	Carg14896	Silver-seed gourd	carcgyB0693

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.256810	Watermelon (97103) v2	cgywmbB453
Cucsa.256810	Cucumber (Gy14) v1	cgycgyB127
Cucsa.256810	Cucurbita maxima (Rimu)	cgycmaB0715
Cucsa.256810	Cucurbita maxima (Rimu)	cgycmaB0727
Cucsa.256810	Cucurbita moschata (Rifu)	cgycmoB0708
Cucsa.256810	Cucurbita moschata (Rifu)	cgycmoB0718
Cucsa.256810	Wild cucumber (PI 183967)	cgycpiB384
Cucsa.256810	Melon (DHL92) v3.5.1	cgymeB432
Cucsa.256810	Watermelon (Charleston Gray)	cgywcgB452
Cucsa.256810	Cucurbita pepo (Zucchini)	cgycpeB0670
Cucsa.256810	Cucurbita pepo (Zucchini)	cgycpeB0675
Cucsa.256810	Cucurbita pepo (Zucchini)	cgycpeB0682
Cucsa.256810	Cucurbita pepo (Zucchini)	cgycpeB0687
Cucsa.256810	Bottle gourd (USVL1VR-Ls)	cgylsiB412
Cucsa.256810	Bottle gourd (USVL1VR-Ls)	cgylsiB419
Cucsa.256810	Silver-seed gourd	carcgyB1077
Cucsa.256810	Silver-seed gourd	carcgyB0269
Cucsa.256810	Silver-seed gourd	carcgyB1190