Cucsa.254430 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.254430
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionLipid transfer protein
Locationscaffold02229 : 2731272 .. 2732286 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTACCTTCTGAGTTCTAATCAAATAAACTAACTTTCCTCTTTACCATTCCGAGAAGTTGTTTTTGTATTAGTCCTCTATAGCAGAATGGAATACACAAGGATGGTGGTGGGTCTAGTTGCGGTTATCGTTGCTGTGCACTGGGCAGGAGCAGCTGCACAGTCTGACTGTACAAATGTGCTGATCAGCATGGCGCCTTGCCTGAATTATATTACAGGGAACTCCTCTACCCCATCACAATCATGCTGCACACAGCTTTCAAATGTTGTCCGTTCAAATCCACAGTGCTTGTGCCAGGTCCTGAATGGTGGTGGCTCGTCGCTTGGGGTGAATATCAACCAAACACAGGCCCTAGCTCTGCCCCAAGCTTGCAACGTTCAGACTCCATCTGTCAGCAGCTGCAATGGTAAGCATACCAATCTCTATCACCAGCTGCATGCTATTTATTAATAGATAATGAAGATATGAACTATTATCAATCTCTATCTAAAGTGCTAACTTGTGATACCTGAAAATTTGCCAGTTGATTCTCCCGCCGGCTCTCCAGCAGGAGCACCAGACTCTTCAAACAATGTTCCTTCAGGTATAAACATAAAAGAAAATACTTTTAATTGTATGCTTGGTCAGTTCATTCACACGGTCAATTAAAGTACCTAACTGCTTGTGCAGGAACTGGATCTAAGACTGTTCCATCGACAGACAATGGCTCATCAGACGGAAGCTCCATCCATATGTCAAAACCTCTACTATTCTCCATCTTGTTGGCTTCTATATATGCTTCAGCTTTCAAGTTGTACTGATCTTATCAGTAGCCTCTTTTCTACAAGTTTGGTTTATTGCTGGTCATTTATTGCATTTAGATATTTTTTGGAGTGTCCATTATTTTAAGCATCCCTTTTGTTTAGGGTGTTTTATTCTATCTTCATATTCTCCTCATCTGGCATTTGTTTCCATGAACTTTGTATTGTATCAGAGATTCTTTTGAATAAAATACATGATCGTGTGCTTGTGAGTAAA

mRNA sequence

TTACCTTCTGAGTTCTAATCAAATAAACTAACTTTCCTCTTTACCATTCCGAGAAGTTGTTTTTGTATTAGTCCTCTATAGCAGAATGGAATACACAAGGATGGTGGTGGGTCTAGTTGCGGTTATCGTTGCTGTGCACTGGGCAGGAGCAGCTGCACAGTCTGACTGTACAAATGTGCTGATCAGCATGGCGCCTTGCCTGAATTATATTACAGGGAACTCCTCTACCCCATCACAATCATGCTGCACACAGCTTTCAAATGTTGTCCGTTCAAATCCACAGTGCTTGTGCCAGGTCCTGAATGGTGGTGGCTCGTCGCTTGGGGTGAATATCAACCAAACACAGGCCCTAGCTCTGCCCCAAGCTTGCAACGTTCAGACTCCATCTGTCAGCAGCTGCAATGTTGATTCTCCCGCCGGCTCTCCAGCAGGAGCACCAGACTCTTCAAACAATGTTCCTTCAGGAACTGGATCTAAGACTGTTCCATCGACAGACAATGGCTCATCAGACGGAAGCTCCATCCATATGTCAAAACCTCTACTATTCTCCATCTTGTTGGCTTCTATATATGCTTCAGCTTTCAAGTTGTACTGATCTTATCAGTAGCCTCTTTTCTACAAGTTTGGTTTATTGCTGGTCATTTATTGCATTTAGATATTTTTTGGAGTGTCCATTATTTTAAGCATCCCTTTTGTTTAGGGTGTTTTATTCTATCTTCATATTCTCCTCATCTGGCATTTGTTTCCATGAACTTTGTATTGTATCAGAGATTCTTTTGAATAAAATACATGATCGTGTGCTTGTGAGTAAA

Coding sequence (CDS)

ATGGAATACACAAGGATGGTGGTGGGTCTAGTTGCGGTTATCGTTGCTGTGCACTGGGCAGGAGCAGCTGCACAGTCTGACTGTACAAATGTGCTGATCAGCATGGCGCCTTGCCTGAATTATATTACAGGGAACTCCTCTACCCCATCACAATCATGCTGCACACAGCTTTCAAATGTTGTCCGTTCAAATCCACAGTGCTTGTGCCAGGTCCTGAATGGTGGTGGCTCGTCGCTTGGGGTGAATATCAACCAAACACAGGCCCTAGCTCTGCCCCAAGCTTGCAACGTTCAGACTCCATCTGTCAGCAGCTGCAATGTTGATTCTCCCGCCGGCTCTCCAGCAGGAGCACCAGACTCTTCAAACAATGTTCCTTCAGGAACTGGATCTAAGACTGTTCCATCGACAGACAATGGCTCATCAGACGGAAGCTCCATCCATATGTCAAAACCTCTACTATTCTCCATCTTGTTGGCTTCTATATATGCTTCAGCTTTCAAGTTGTACTGA

Protein sequence

MEYTRMVVGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSNVVRSNPQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDSSNNVPSGTGSKTVPSTDNGSSDGSSIHMSKPLLFSILLASIYASAFKLY*
Homology
[Close]
BLAST of Cucsa.254430 vs. Swiss-Prot
Match: NLTL2_ARATH (Non-specific lipid-transfer protein-like protein At2g13820 OS=Arabidopsis thaliana GN=At2g13820 PE=1 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 4.2e-17
Identity = 50/165 (30.30%), Postives = 90/165 (54.55%), Query Frame = 1 

Query: 7   VVGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSST--PSQSCCTQLSNVVRSN 66
           ++ + +V+  +    A A  DC++++++MA CL+++T  S+   P  +CC+ L  VVR+ 
Sbjct: 6   ILMIFSVVALMSGERAHAAVDCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTVVRTG 65

Query: 67  PQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPSVSSCNV----DSPAGSPAGAPDS 126
           P+CLC+     G SLG+ ++ ++A +LP  C V  P  + C +    D PA +P  +P +
Sbjct: 66  PECLCEAFKNSG-SLGLTLDLSKAASLPSVCKVAAPPSARCGLSVSGDPPATAPGLSPTA 125

Query: 127 SNNVP--SGTGSKTVPSTDNGSSDGSSIHMSKP-LLFSILLASIY 163
               P  S   +   P +   SSD S + +S   ++F  L++S Y
Sbjct: 126 GAGAPALSSGANAATPVSSPRSSDASLLSVSFAFVIFMALISSFY 169

[Close]
BLAST of Cucsa.254430 vs. Swiss-Prot
Match: LTPG2_ARATH (Non-specific lipid transfer protein GPI-anchored 2 OS=Arabidopsis thaliana GN=LTPG2 PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 7.2e-17
Identity = 59/166 (35.54%), Postives = 86/166 (51.81%), Query Frame = 1 

Query: 20  AGAAAQSDCTNVLISMAPCLNYIT----GNSSTPSQSCCTQLSNVVRSNPQCLCQVLNGG 79
           +G +   DC   L++M  CL+Y+T    G ++ P ++CC  L+ +V S+PQCLC +L+G 
Sbjct: 30  SGPSGAPDCMANLMNMTGCLSYVTVGEGGGAAKPDKTCCPALAGLVESSPQCLCYLLSGD 89

Query: 80  -GSSLGVNINQTQALALPQACNVQTPSVSSCN-----VDSP------AGSPAGAPDSSNN 139
             + LG+ I++ +AL LP  C V TP  S C+     V +P        SPA AP S + 
Sbjct: 90  MAAQLGIKIDKAKALKLPGVCGVITPDPSLCSLFGIPVGAPVAMGDEGASPAYAPGSMSG 149

Query: 140 VPSGTGSKTVPSTDNGSSDGSSIHMSKPLLFSILLASIYASAFKLY 170
             S  G  + PS   GS   SS   S   LF  L+    A AF ++
Sbjct: 150 AESPGGFGSGPSASRGSDAPSSAPYS---LFLNLIIFPLAFAFYIF 192

[Close]
BLAST of Cucsa.254430 vs. Swiss-Prot
Match: NLTL5_ARATH (Non-specific lipid-transfer protein-like protein At5g64080 OS=Arabidopsis thaliana GN=At5g64080 PE=1 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.0e-15
Identity = 49/152 (32.24%), Postives = 86/152 (56.58%), Query Frame = 1 

Query: 18  HWAGAAAQS-DCTNVLISMAPCLNYIT--GNSSTPSQSCCTQLSNVVRSNPQCLCQVLNG 77
           H A A A S DC+ ++++MA CL++++  G  + P  +CC+ L  V++++ QCLC+    
Sbjct: 32  HHATAPAPSVDCSTLILNMADCLSFVSSGGTVAKPEGTCCSGLKTVLKADSQCLCEAFKS 91

Query: 78  GGSSLGVNINQTQALALPQACNVQTPSVSSCNVD-SPAGSPAGAPDSSNNVPSGTGSKTV 137
             +SLGV +N T+A  LP AC +  PS+++C +  +P+ +P  AP  +   P  T     
Sbjct: 92  S-ASLGVTLNITKASTLPAACKLHAPSIATCGLSVAPSTAPGLAPGVAAAGPE-TAGFLA 151

Query: 138 PSTDNGSSDGSSIHMSKPLLFSILLASIYASA 166
           P+  +G+   S I  S   + S +L  ++ S+
Sbjct: 152 PNPSSGNDGSSLIPTSFTTVLSAVLFVLFFSS 181

[Close]
BLAST of Cucsa.254430 vs. Swiss-Prot
Match: XYP11_ARATH (Xylogen-like protein 11 OS=Arabidopsis thaliana GN=XYP11 PE=1 SV=2)

HSP 1 Score: 71.6 bits (174), Expect = 9.2e-12
Identity = 36/106 (33.96%), Postives = 63/106 (59.43%), Query Frame = 1 

Query: 21  GAAAQSDCTNVLISMAPCLNYIT--GNSSTPSQSCCTQLSNVVRSNPQCLCQVLNGGGS- 80
           G ++  +C   +++++ C +Y+    N   P  +CC +L+ +V+S+P+C+C +  GG S 
Sbjct: 33  GPSSPVNCLVSMLNVSDCFSYVQVGSNEIKPEAACCPELAGMVQSSPECVCNLYGGGASP 92

Query: 81  SLGVNINQTQALALPQACNVQTPSVSSCNV-DSPAGSPAGAPDSSN 123
             GV +++ +A  L   C V+ PS S C+V   P  SPAG+ DSS+
Sbjct: 93  RFGVKLDKQRAEQLSTICGVKAPSPSLCSVLGFPTISPAGSEDSSS 138

[Close]
BLAST of Cucsa.254430 vs. Swiss-Prot
Match: NLTP3_ORYSI (Non-specific lipid-transfer protein 3 OS=Oryza sativa subsp. indica GN=LTP110-A PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 8.0e-08
Identity = 38/111 (34.23%), Postives = 56/111 (50.45%), Query Frame = 1 

Query: 4   TRMVVGLVAVIVAVHWAG-AAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSNV-- 63
           T  +V LVAV+ A   A  A+A   C +V  S+APCL+Y+ G  S+PS SCC+ +  +  
Sbjct: 7   TMALVALVAVVAAAVVAERASAAVSCGDVTSSIAPCLSYVMGRESSPSSSCCSGVRTLNG 66

Query: 64  ---VRSNPQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPSVSSCNVD 109
                ++ +  C  L    SS   N+N   A ++P  C V      S +VD
Sbjct: 67  KASSSADRRTACSCLKNMASSFR-NLNMGNAASIPSKCGVSVAFPISTSVD 116

[Close]
BLAST of Cucsa.254430 vs. TrEMBL
Match: A0A0A0L5G6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G146490 PE=3 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 1.5e-90
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 1 

Query: 1   MEYTRMVVGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSNV 60
           MEYTRMVVGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSNV
Sbjct: 1   MEYTRMVVGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSNV 60

Query: 61  VRSNPQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDS 120
           VRSNPQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDS
Sbjct: 61  VRSNPQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDS 120

Query: 121 SNNVPSGTGSKTVPSTDNGSSDGSSIHMSKPLLFSILLASIYASAFKLY 170
           SNNVPSGTGSKTVPSTDNGSSDGSSIHMSKPLLFSILLASIYASAFKLY
Sbjct: 121 SNNVPSGTGSKTVPSTDNGSSDGSSIHMSKPLLFSILLASIYASAFKLY 169

[Close]
BLAST of Cucsa.254430 vs. TrEMBL
Match: F6HDR8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g03730 PE=3 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 5.9e-58
Identity = 113/166 (68.07%), Postives = 131/166 (78.92%), Query Frame = 1 

Query: 1   MEYTRMVVGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSNV 60
           M  T + VGLV V V + W G AAQS CT+V+ISM+PCLNYI+GNSSTPS  CCTQL++V
Sbjct: 1   MARTALAVGLVLVAVTMLWPGTAAQSSCTSVIISMSPCLNYISGNSSTPSSGCCTQLASV 60

Query: 61  VRSNPQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDS 120
           VRS PQCLC+VLNGGGSS+G+NINQTQALALP ACNVQTP +S CN  SPA SPA  P+S
Sbjct: 61  VRSQPQCLCEVLNGGGSSVGININQTQALALPGACNVQTPPLSRCNAASPADSPAAMPES 120

Query: 121 SNNVPSGTGSKTVPSTDNGSSDGSSIHMSKPLLFSILLASIYASAF 167
              VPS  GSKTVPSTDNG+S+GSS   S  LLF +L+A+ YAS F
Sbjct: 121 PTTVPSDGGSKTVPSTDNGTSNGSSTKSSMSLLFILLIAASYASTF 166

[Close]
BLAST of Cucsa.254430 vs. TrEMBL
Match: B9HUU2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s09550g PE=3 SV=2)

HSP 1 Score: 229.6 bits (584), Expect = 2.9e-57
Identity = 114/167 (68.26%), Postives = 135/167 (80.84%), Query Frame = 1 

Query: 1   MEYTRMVVGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSNV 60
           M +T M +GL  V+V + WAGA AQSDCTNVLISM+PCLNYITGNSSTPS  CCTQL++V
Sbjct: 1   MAHTAMSMGLTMVLVTMLWAGAMAQSDCTNVLISMSPCLNYITGNSSTPSSQCCTQLASV 60

Query: 61  VRSNPQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDS 120
           VRS+PQCLCQVLNGGGSSLG+ +N+TQA+ALP ACNVQTP +SSCN  SPA SPAG P++
Sbjct: 61  VRSSPQCLCQVLNGGGSSLGIEVNKTQAIALPGACNVQTPPISSCNGASPAASPAGTPEA 120

Query: 121 SNNVPSGTGSKTVPSTD-NGSSDGSSIHMSKPLLFSILLASIYASAF 167
           S + PSGT SKTVPST  +G+S GSS+  S  LLF +L A+ Y S F
Sbjct: 121 S-STPSGTASKTVPSTQTDGTSGGSSLDFSISLLFFLLFAASYGSTF 166

[Close]
BLAST of Cucsa.254430 vs. TrEMBL
Match: A0A059B3V7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H03442 PE=3 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 1.9e-56
Identity = 111/160 (69.38%), Postives = 126/160 (78.75%), Query Frame = 1 

Query: 5   RMVVGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSNVVRSN 64
           RM   LV   VA+ W GAAAQS CTNVLIS++PCLNYITGNSST S +CCTQL++VVRS 
Sbjct: 5   RMEASLVLAAVAMLWVGAAAQSSCTNVLISLSPCLNYITGNSSTASPTCCTQLASVVRSQ 64

Query: 65  PQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDSSNNV 124
           PQCLCQVL+GGGSSLG+N+NQTQALALP AC VQTP +SSCN  SPA SP+  PDS   V
Sbjct: 65  PQCLCQVLSGGGSSLGINVNQTQALALPGACKVQTPPISSCNAASPAESPSETPDSPTTV 124

Query: 125 PSGTGSKTVPSTDNGSSDGSSIHMSKPLLFSILLASIYAS 165
           PSG GSKT+PST +GSSD  S  +S PLLF +LLA  Y S
Sbjct: 125 PSGDGSKTIPSTQDGSSDAGSNKLSIPLLFVLLLAGSYVS 164

[Close]
BLAST of Cucsa.254430 vs. TrEMBL
Match: B9RTN9_RICCO (Nonspecific lipid-transfer protein A, putative OS=Ricinus communis GN=RCOM_0911740 PE=3 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 3.6e-55
Identity = 111/163 (68.10%), Postives = 133/163 (81.60%), Query Frame = 1 

Query: 1   MEYTRMVVGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSNV 60
           M +  + + L   +V++ +AGA AQS CTNVLISM+PCLNYITGNSSTPS  CC+QLS+V
Sbjct: 1   MAHRDLAMSLALAVVSMLYAGAVAQSGCTNVLISMSPCLNYITGNSSTPSSQCCSQLSSV 60

Query: 61  VRSNPQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDS 120
           VRS+PQCLCQVL+GGGSSLG+NINQTQALALP ACNVQTP +SSCN  SPA SPAG P+ 
Sbjct: 61  VRSSPQCLCQVLSGGGSSLGININQTQALALPGACNVQTPPISSCNAASPAASPAGTPEI 120

Query: 121 SNNVPSGTGSKTVPSTD-NGSSDGSSIHMSKPLLFSILLASIY 163
             N PSGTGSKTVPST+ +G+SDGSSI +S PLL  +L A+ +
Sbjct: 121 P-NTPSGTGSKTVPSTEVDGTSDGSSIKLSIPLLAFLLFAAFH 162

[Close]
BLAST of Cucsa.254430 vs. TAIR10
Match: AT3G22600.1 (AT3G22600.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 171.4 bits (433), Expect = 4.8e-43
Identity = 93/160 (58.13%), Postives = 112/160 (70.00%), Query Frame = 1 

Query: 5   RMVVGLVAVIVAVHWAGA---AAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSNVV 64
           +M +GLV + V +    +   +AQS CTN LISM+PCLNYITGNS++P+Q CC QLS VV
Sbjct: 2   KMEMGLVFLTVFMAVMSSTMVSAQSSCTNALISMSPCLNYITGNSTSPNQQCCNQLSRVV 61

Query: 65  RSNPQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPSVSSCNVDSPAG-----SPAG 124
           +S+P CLCQVLNGGGS LG+N+NQTQAL LP+ACNVQTP VS CN     G     SPA 
Sbjct: 62  QSSPDCLCQVLNGGGSQLGINVNQTQALGLPRACNVQTPPVSRCNTGGGGGGSTSDSPAE 121

Query: 125 APDSSNNVPSGTGSKTVPSTDNG---SSDGSSIHMSKPLL 154
           +P+SS     G GSKTVP  +     SSDGSSI  S PL+
Sbjct: 122 SPNSSG---PGNGSKTVPVGEGDGPPSSDGSSIKFSFPLI 158

[Close]
BLAST of Cucsa.254430 vs. TAIR10
Match: AT4G14815.1 (AT4G14815.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 146.7 bits (369), Expect = 1.3e-35
Identity = 79/147 (53.74%), Postives = 99/147 (67.35%), Query Frame = 1 

Query: 23  AAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSNVVRSNPQCLCQVLNGGGSSLGVN 82
           +AQS CTNVLISMAPCL++IT N+S PSQ CC QL++VVR + +CLCQVL+GGGS LG+N
Sbjct: 21  SAQSSCTNVLISMAPCLSFITQNTSLPSQQCCNQLAHVVRYSSECLCQVLDGGGSQLGIN 80

Query: 83  INQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDSSNNVPSGTGSKTVPSTDNGSSD 142
           +N+TQALALP+AC+V+TP  S C+  S   S         +   G GSKTVP  +  SSD
Sbjct: 81  VNETQALALPKACHVETPPASRCHSGSSVNS---------HSEHGNGSKTVP-REKSSSD 140

Query: 143 GSSIHMSKPLLFSILLASIYASAFKLY 170
           G SI  S PLL  +  AS     +  Y
Sbjct: 141 G-SIKFSFPLLAILFTASYITLIYAKY 156

[Close]
BLAST of Cucsa.254430 vs. TAIR10
Match: AT2G48130.1 (AT2G48130.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 132.1 bits (331), Expect = 3.2e-31
Identity = 71/179 (39.66%), Postives = 102/179 (56.98%), Query Frame = 1 

Query: 1   MEYTRMVVGLVAVIVAVHWAGAAAQ--SDCTNVLISMAPCLNYITGNSSTPSQSCCTQLS 60
           M Y R        +VA  W+   AQ  S C + L +++PCL+YITGNS+TPSQ CC++L 
Sbjct: 1   MGYRRSYAITFVALVAALWSVTKAQPSSSCVSTLTTLSPCLSYITGNSTTPSQPCCSRLD 60

Query: 61  NVVRSNPQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAP 120
           +V++S+PQC+C  +N    ++G+NIN+TQAL LP ACN+QTP ++ CN  +   +   AP
Sbjct: 61  SVIKSSPQCICSAVNSPIPNIGLNINRTQALQLPNACNIQTPPLTQCNAATGPTAQPPAP 120

Query: 121 DSSNNVPS---------------GTGSKTVPSTDNGSS----DGSSIHMSKPLLFSILL 159
             +   P                G GSKTVPS   GSS    D   +H    L+F++L+
Sbjct: 121 SPTEKTPDVTLTPTSLPGARSGVGGGSKTVPSVGTGSSSRNVDPLPLHF---LMFAVLV 176

[Close]
BLAST of Cucsa.254430 vs. TAIR10
Match: AT1G03103.1 (AT1G03103.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 122.1 bits (305), Expect = 3.3e-28
Identity = 70/161 (43.48%), Postives = 96/161 (59.63%), Query Frame = 1 

Query: 6   MVVGLVAVIVAVHWAGAAA--QSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSNVVRS 65
           M++ ++A+++A    G A   Q+ C + L S++PCL Y+ G SS+PS SCC Q S VV+S
Sbjct: 1   MILAILALVIATFLYGGATTVQAGCRDTLTSLSPCLYYLNGGSSSPSWSCCRQFSTVVQS 60

Query: 66  NPQCLCQVLNGGGSSL-GVNINQTQALALPQACNVQTPSVSSCNVDS------PAGSPAG 125
           +P+CLC V+N   SS  G   N+T AL LP ACNVQTPS S CN         PA +P G
Sbjct: 61  SPECLCSVVNSNESSFYGFKFNRTLALNLPTACNVQTPSPSLCNTGGNVPTTLPANTPVG 120

Query: 126 APDSSNNVPSGT--------GSKTVPSTDNGSSDGSSIHMS 150
           +P S+ + PSGT        GSK  P ++  SS  + I +S
Sbjct: 121 SPRSAPS-PSGTTSPANTPSGSKKFPLSNESSSKSNVIILS 160

[Close]
BLAST of Cucsa.254430 vs. TAIR10
Match: AT2G13820.1 (AT2G13820.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 89.4 bits (220), Expect = 2.4e-18
Identity = 50/165 (30.30%), Postives = 90/165 (54.55%), Query Frame = 1 

Query: 7   VVGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSST--PSQSCCTQLSNVVRSN 66
           ++ + +V+  +    A A  DC++++++MA CL+++T  S+   P  +CC+ L  VVR+ 
Sbjct: 6   ILMIFSVVALMSGERAHAAVDCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTVVRTG 65

Query: 67  PQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPSVSSCNV----DSPAGSPAGAPDS 126
           P+CLC+     G SLG+ ++ ++A +LP  C V  P  + C +    D PA +P  +P +
Sbjct: 66  PECLCEAFKNSG-SLGLTLDLSKAASLPSVCKVAAPPSARCGLSVSGDPPATAPGLSPTA 125

Query: 127 SNNVP--SGTGSKTVPSTDNGSSDGSSIHMSKP-LLFSILLASIY 163
               P  S   +   P +   SSD S + +S   ++F  L++S Y
Sbjct: 126 GAGAPALSSGANAATPVSSPRSSDASLLSVSFAFVIFMALISSFY 169

[Close]
BLAST of Cucsa.254430 vs. NCBI nr
Match: gi|449432688|ref|XP_004134131.1| (PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Cucumis sativus])

HSP 1 Score: 340.1 bits (871), Expect = 2.2e-90
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 1 

Query: 1   MEYTRMVVGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSNV 60
           MEYTRMVVGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSNV
Sbjct: 1   MEYTRMVVGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSNV 60

Query: 61  VRSNPQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDS 120
           VRSNPQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDS
Sbjct: 61  VRSNPQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDS 120

Query: 121 SNNVPSGTGSKTVPSTDNGSSDGSSIHMSKPLLFSILLASIYASAFKLY 170
           SNNVPSGTGSKTVPSTDNGSSDGSSIHMSKPLLFSILLASIYASAFKLY
Sbjct: 121 SNNVPSGTGSKTVPSTDNGSSDGSSIHMSKPLLFSILLASIYASAFKLY 169

[Close]
BLAST of Cucsa.254430 vs. NCBI nr
Match: gi|659076387|ref|XP_008438652.1| (PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Cucumis melo])

HSP 1 Score: 332.0 bits (850), Expect = 6.0e-88
Identity = 164/169 (97.04%), Postives = 167/169 (98.82%), Query Frame = 1 

Query: 1   MEYTRMVVGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSNV 60
           MEYTRMV GLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLS+V
Sbjct: 1   MEYTRMVAGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSSV 60

Query: 61  VRSNPQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDS 120
           VRS PQCLCQVLNGGG+SLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDS
Sbjct: 61  VRSQPQCLCQVLNGGGASLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDS 120

Query: 121 SNNVPSGTGSKTVPSTDNGSSDGSSIHMSKPLLFSILLASIYASAFKLY 170
           SNNVPSGTGSKTVPSTDNGSSDGSSIH+SKPLLFSILLASIYASAFKLY
Sbjct: 121 SNNVPSGTGSKTVPSTDNGSSDGSSIHLSKPLLFSILLASIYASAFKLY 169

[Close]
BLAST of Cucsa.254430 vs. NCBI nr
Match: gi|470122153|ref|XP_004297113.1| (PREDICTED: non-specific lipid transfer protein GPI-anchored 2 [Fragaria vesca subsp. vesca])

HSP 1 Score: 233.0 bits (593), Expect = 3.8e-58
Identity = 116/161 (72.05%), Postives = 137/161 (85.09%), Query Frame = 1 

Query: 5   RMVVGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSNVVRSN 64
           R+ + LV V+VA+  A +AAQSDCTNV+ISM+PCLNYITGNSSTPS  CC+QLS+VVRS+
Sbjct: 4   RIGMSLVLVLVAMFLARSAAQSDCTNVIISMSPCLNYITGNSSTPSSGCCSQLSSVVRSS 63

Query: 65  PQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAP-DSSNN 124
           PQCLCQVLNGGGSSLG+N+NQTQALALP ACNVQTP +S CN  SPAGSPAG P DSSN 
Sbjct: 64  PQCLCQVLNGGGSSLGINVNQTQALALPGACNVQTPPISQCNAASPAGSPAGTPDDSSNT 123

Query: 125 VPSGTGSKTVPSTDNGSSDGSSIHMSKPLLFSILLASIYAS 165
           VPSG+GSKTVPSTD+GSSDG+SI +S   L  +L A+ +A+
Sbjct: 124 VPSGSGSKTVPSTDDGSSDGNSIKLSMTQLI-VLFAAAFAT 163

[Close]
BLAST of Cucsa.254430 vs. NCBI nr
Match: gi|731389274|ref|XP_010649925.1| (PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 isoform X2 [Vitis vinifera])

HSP 1 Score: 231.9 bits (590), Expect = 8.5e-58
Identity = 113/166 (68.07%), Postives = 131/166 (78.92%), Query Frame = 1 

Query: 1   MEYTRMVVGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSNV 60
           M  T + VGLV V V + W G AAQS CT+V+ISM+PCLNYI+GNSSTPS  CCTQL++V
Sbjct: 1   MARTALAVGLVLVAVTMLWPGTAAQSSCTSVIISMSPCLNYISGNSSTPSSGCCTQLASV 60

Query: 61  VRSNPQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDS 120
           VRS PQCLC+VLNGGGSS+G+NINQTQALALP ACNVQTP +S CN  SPA SPA  P+S
Sbjct: 61  VRSQPQCLCEVLNGGGSSVGININQTQALALPGACNVQTPPLSRCNAASPADSPAAMPES 120

Query: 121 SNNVPSGTGSKTVPSTDNGSSDGSSIHMSKPLLFSILLASIYASAF 167
              VPS  GSKTVPSTDNG+S+GSS   S  LLF +L+A+ YAS F
Sbjct: 121 PTTVPSDGGSKTVPSTDNGTSNGSSTKSSMSLLFILLIAASYASTF 166

[Close]
BLAST of Cucsa.254430 vs. NCBI nr
Match: gi|743859726|ref|XP_011030671.1| (PREDICTED: non-specific lipid transfer protein GPI-anchored 2-like [Populus euphratica])

HSP 1 Score: 231.1 bits (588), Expect = 1.4e-57
Identity = 114/167 (68.26%), Postives = 137/167 (82.04%), Query Frame = 1 

Query: 1   MEYTRMVVGLVAVIVAVHWAGAAAQSDCTNVLISMAPCLNYITGNSSTPSQSCCTQLSNV 60
           M +T M +GL  V+V + WAGA AQSDCTNVLISM+PCLNYITGNSSTPS  CCTQL++V
Sbjct: 1   MAHTAMSMGLAMVLVTMLWAGAMAQSDCTNVLISMSPCLNYITGNSSTPSSQCCTQLASV 60

Query: 61  VRSNPQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPSVSSCNVDSPAGSPAGAPDS 120
           VRS+PQCLCQVLNGGGSSLG+N+N+TQA+ALP ACNVQTP +SSC+  SPAGSPAG P++
Sbjct: 61  VRSSPQCLCQVLNGGGSSLGINVNKTQAIALPGACNVQTPPISSCSGASPAGSPAGTPEA 120

Query: 121 SNNVPSGTGSKTVPSTD-NGSSDGSSIHMSKPLLFSILLASIYASAF 167
           S + PSGT SKTVPST  +G+S GSS+  S  +LF +L A+ Y S F
Sbjct: 121 S-STPSGTASKTVPSTQKDGTSGGSSMDFSISILFFLLFAASYGSTF 166

The following BLAST results are available for this feature:
BLAST of Cucsa.254430 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NLTL2_ARATH4.2e-1730.30Non-specific lipid-transfer protein-like protein At2g13820 OS=Arabidopsis thalia... [more]
LTPG2_ARATH7.2e-1735.54Non-specific lipid transfer protein GPI-anchored 2 OS=Arabidopsis thaliana GN=LT... [more]
NLTL5_ARATH1.0e-1532.24Non-specific lipid-transfer protein-like protein At5g64080 OS=Arabidopsis thalia... [more]
XYP11_ARATH9.2e-1233.96Xylogen-like protein 11 OS=Arabidopsis thaliana GN=XYP11 PE=1 SV=2[more]
NLTP3_ORYSI8.0e-0834.23Non-specific lipid-transfer protein 3 OS=Oryza sativa subsp. indica GN=LTP110-A ... [more]
BLAST of Cucsa.254430 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L5G6_CUCSA1.5e-90100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G146490 PE=3 SV=1[more]
F6HDR8_VITVI5.9e-5868.07Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g03730 PE=3 SV=... [more]
B9HUU2_POPTR2.9e-5768.26Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s09550g PE=3 SV=2[more]
A0A059B3V7_EUCGR1.9e-5669.38Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H03442 PE=3 SV=1[more]
B9RTN9_RICCO3.6e-5568.10Nonspecific lipid-transfer protein A, putative OS=Ricinus communis GN=RCOM_09117... [more]
BLAST of Cucsa.254430 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G22600.14.8e-4358.13 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT4G14815.11.3e-3553.74 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT2G48130.13.2e-3139.66 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT1G03103.13.3e-2843.48 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT2G13820.12.4e-1830.30 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
BLAST of Cucsa.254430 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449432688|ref|XP_004134131.1|2.2e-90100.00PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Cucumis s... [more]
gi|659076387|ref|XP_008438652.1|6.0e-8897.04PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Cucumis m... [more]
gi|470122153|ref|XP_004297113.1|3.8e-5872.05PREDICTED: non-specific lipid transfer protein GPI-anchored 2 [Fragaria vesca su... [more]
gi|731389274|ref|XP_010649925.1|8.5e-5868.07PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 isoform X2... [more]
gi|743859726|ref|XP_011030671.1|1.4e-5768.26PREDICTED: non-specific lipid transfer protein GPI-anchored 2-like [Populus euph... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000528Plant_LTP
IPR016140Bifunc_inhib/LTP/seed_store
Vocabulary: Biological Process
TermDefinition
GO:0006869lipid transport
Vocabulary: Molecular Function
TermDefinition
GO:0008289lipid binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006869 lipid transport
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0008289 lipid binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.254430.1Cucsa.254430.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000528Plant lipid transfer protein/Par allergenPRINTSPR00382LIPIDTRNSFERcoord: 27..43
score: 9.8E-7coord: 82..99
score: 9.8E-7coord: 48..62
score: 9.
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainPFAMPF14368LTP_2coord: 12..105
score: 1.2
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainSMARTSM00499aai_6coord: 28..105
score: 2.
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainunknownSSF47699Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumincoord: 27..108
score: 2.75
NoneNo IPR availableGENE3DG3DSA:1.10.110.10coord: 27..109
score: 3.0
NoneNo IPR availablePANTHERPTHR33044FAMILY NOT NAMEDcoord: 1..161
score: 1.3
NoneNo IPR availablePANTHERPTHR33044:SF23BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATEDcoord: 1..161
score: 1.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.254430Cla007515Watermelon (97103) v1cgywmB483
Cucsa.254430Cla021611Watermelon (97103) v1cgywmB479
Cucsa.254430Csa3G146490Cucumber (Chinese Long) v2cgycuB366
Cucsa.254430MELO3C006519Melon (DHL92) v3.5.1cgymeB439
Cucsa.254430ClCG05G005060Watermelon (Charleston Gray)cgywcgB451
Cucsa.254430ClCG06G006310Watermelon (Charleston Gray)cgywcgB452
Cucsa.254430CSPI03G12980Wild cucumber (PI 183967)cgycpiB383
Cucsa.254430CmaCh00G003590Cucurbita maxima (Rimu)cgycmaB0702
Cucsa.254430CmaCh14G017230Cucurbita maxima (Rimu)cgycmaB0709
Cucsa.254430CmaCh06G013970Cucurbita maxima (Rimu)cgycmaB0727
Cucsa.254430CmoCh06G014000Cucurbita moschata (Rifu)cgycmoB0718
Cucsa.254430CmoCh02G018380Cucurbita moschata (Rifu)cgycmoB0714
Cucsa.254430CmoCh17G002150Cucurbita moschata (Rifu)cgycmoB0707
Cucsa.254430CmoCh14G017620Cucurbita moschata (Rifu)cgycmoB0700
Cucsa.254430Lsi05G009440Bottle gourd (USVL1VR-Ls)cgylsiB418
Cucsa.254430Lsi09G013090Bottle gourd (USVL1VR-Ls)cgylsiB412
Cucsa.254430Lsi05G016180Bottle gourd (USVL1VR-Ls)cgylsiB415
Cucsa.254430Cp4.1LG03g10640Cucurbita pepo (Zucchini)cgycpeB0682
Cucsa.254430Cp4.1LG08g04100Cucurbita pepo (Zucchini)cgycpeB0687
Cucsa.254430MELO3C006519.2Melon (DHL92) v3.6.1cgymedB432
Cucsa.254430CsaV3_3G013120Cucumber (Chinese Long) v3cgycucB387
Cucsa.254430Cla97C06G115830Watermelon (97103) v2cgywmbB453
Cucsa.254430Cla97C07G128640Watermelon (97103) v2cgywmbB457
Cucsa.254430Bhi01G000571Wax gourdcgywgoB522
Cucsa.254430Bhi05G000230Wax gourdcgywgoB529
Cucsa.254430Carg23509Silver-seed gourdcarcgyB0970
Cucsa.254430Carg06153Silver-seed gourdcarcgyB1077
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cucsa.254430Cucsa.239360Cucumber (Gy14) v1cgycgyB123
The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.254430Silver-seed gourdcarcgyB0134
Cucsa.254430Silver-seed gourdcarcgyB0269
Cucsa.254430Silver-seed gourdcarcgyB0383
Cucsa.254430Watermelon (97103) v2cgywmbB452
Cucsa.254430Watermelon (97103) v2cgywmbB458
Cucsa.254430Wax gourdcgywgoB511
Cucsa.254430Wax gourdcgywgoB533
Cucsa.254430Cucurbita maxima (Rimu)cgycmaB0714
Cucsa.254430Cucurbita maxima (Rimu)cgycmaB0731
Cucsa.254430Cucurbita moschata (Rifu)cgycmoB0706
Cucsa.254430Cucurbita moschata (Rifu)cgycmoB0720
Cucsa.254430Watermelon (Charleston Gray)cgywcgB442
Cucsa.254430Watermelon (97103) v1cgywmB472
Cucsa.254430Cucurbita pepo (Zucchini)cgycpeB0672
Cucsa.254430Cucurbita pepo (Zucchini)cgycpeB0676