Cp4.1LG08g04100 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATCAAGGAAGCAATTGGAGGGCTCAATTCACAAAAACTAATCCAATACGAGAATTAAGGATTCCCACAAAAAAAAACTTCCTACCATTTATAGATATTGTCCACTTTAACCTGGAATGTATCATCAAATTCATCTACTAAGGAGAGATTTTCACACCCTTATCTGAAATGCATACCCCTATTTTAATGATCCATACCTCTATTTTAATGATGCATACCTCTATTTTAATGTGTCTACTAAGGAGAGATTTTCACACCCTTATCTAAAATGCATACCCCTATTTTAATCAATGAAAAGGACGTGGCGTCTGAAAAGGGACGGATCTTTTTACTTTACAGCTCCCTTCATATTTTATGAAAATAATACCAATTTCTCAAAGGGTTAGGATTACGATTGACCAGACACAGAAAGTAATAAAAGTCGAAGCCAAGAACAGTTGAAAGGTAAAACCCAGAATACGCTTCCTTCACGTCATTAATAAAGTTCAGNAGTCTACAGTCTACAGCCAAGAACAGTTAATAAAGTTCAGCCATCCAAGTCTACAGCCTTGACGCCTAAGTTTTCTTGGGTTCTTTCCTGATGAAGAAATTGGTGGCCTTGTTAACCGACCCCCATATACCATTCATTAGGTGTCAAAGCCCCAAGTTTGAACAACTTTACCTCAAAAGCTCCACCACAGAAAACTGTTAAGAAAGTAGGAGAAGTGGTTCACCAAATCAAACTTCTTTCCTTTTGTCCATTTCTTCCTTCCATTCCCTACAAAAACCAAACAATTCTGCTCTGGAACTTCACAAATCAAACTTTCTACCTTCTGAGTTCTCAACAAGTTGTTAACTGAAGCAGTTGTAATAGTACTCTCCATAGAAGAATGGCACAGGGAAAGATGGTGATGACTCTGCTTGCCGTTATCGTTGCCGTTCACTGGGCAGGAGCAGCGGCACAGTCGGACTGTACGAATGTGCTGATCAGCTTGTCACCGTGCCTGAATTACATTACAGGGAACTCTTCTACCCCATCACAAGGATGCTGCACACAGCTTGCAACCGTTGTCCGCTCACAACCACAGTGCTTGTGCCAGGTCCTGAATGGTGGTGGTTCCTCGCTTGGGGTCAACATCAACCAAACCCAGGCTCTGGCTCTGCCCCAGGCTTGCAATGTTCAGACTCCTTCCATCAGCAGCTGCAATGGTAAGCATTCATTCATGTGTAAAATTTCTGGGCACCACTGCACATAAACAATGAGCAGGAGGATTATTTATGTATATAGACATTAGGGTTATGAACAAATATCAAACTCTAACTAAAGTGCTAACTTTTAATACCTGAAAATTGCCAGTTGCTTCTCCCACCGGCTCTCCAGCAGGATCACCGGAATCTTCAAACAATGTTCCTTCAGGTATGTACATAACAAACGCTAAACGGTGTGCTCTGTCATTTCGTTCGTATGACAACTACATATTTAACGTACCTAATTGTATATGCAGGAACTGGATCTAAGACTGTTCCATCACCAGACAACAACTCATCAGACGGAAGCTCCATCCATTTGTCAAAACCTCTACTATTCTCCATCTTGTTGGCTTCTACATATGCTTCAGCTTTCAAGTTGTACTGATCTTCTTATCAGTGGCCTATCTTCTATAAGTATAGTTCATGGTTGGTCATTTATTGCGTTCAGATTCTTTTGGAGTGTCCTCCCTTTGGTTGAGGGTGTTTTCTATCTTTATATTCTCCTCATGGCATTTGTTTCCAAGAACTTTGTATTGCATCAGAGATTCTTTTGAATAAAATACATGATTCTGTGTTTGTGAGTTCTAAA TATCAAGGAAGCAATTGGAGGGCTCAATTCACAAAAACTAATCCAATACGAGAATTAAGGATTCCCACAAAAAAAAACTTCCTACCATTTATAGATATTGTCCACTTTAACCTGGAATGTATCATCAAATTCATCTACTAAGGAGAGATTTTCACACCCTTATCTGAAATGCATACCCCTATTTTAATGATCCATACCTCTATTTTAATGATGCATACCTCTATTTTAATGTGTCTACTAAGGAGAGATTTTCACACCCTTATCTAAAATGCATACCCCTATTTTAATCAATGAAAAGGACGTGGCGTCTGAAAAGGGACGGATCTTTTTACTTTACAGCTCCCTTCATATTTTATGAAAATAATACCAATTTCTCAAAGGGTTAGGATTACGATTGACCAGACACAGAAAGTAATAAAAGTCGAAGCCAAGAACAGTTGAAAGGTAAAACCCAGAATACGCTTCCTTCACGTCATTAATAAAGTTCAGNAGTCTACAGTCTACAGCCAAGAACAGTTAATAAAGTTCAGCCATCCAAGTCTACAGCCTTGACGCCTAAGTTTTCTTGGGTTCTTTCCTGATGAAGAAATTGGTGGCCTTGTTAACCGACCCCCATATACCATTCATTAGGTGTCAAAGCCCCAAGTTTGAACAACTTTACCTCAAAAGCTCCACCACAGAAAACTGTTAAGAAAGTAGGAGAAGTGGTTCACCAAATCAAACTTCTTTCCTTTTGTCCATTTCTTCCTTCCATTCCCTACAAAAACCAAACAATTCTGCTCTGGAACTTCACAAATCAAACTTTCTACCTTCTGAGTTCTCAACAAGTTGTTAACTGAAGCAGTTGTAATAGTACTCTCCATAGAAGAATGGCACAGGGAAAGATGGTGATGACTCTGCTTGCCGTTATCGTTGCCGTTCACTGGGCAGGAGCAGCGGCACAGTCGGACTGTACGAATGTGCTGATCAGCTTGTCACCGTGCCTGAATTACATTACAGGGAACTCTTCTACCCCATCACAAGGATGCTGCACACAGCTTGCAACCGTTGTCCGCTCACAACCACAGTGCTTGTGCCAGGTCCTGAATGGTGGTGGTTCCTCGCTTGGGGTCAACATCAACCAAACCCAGGCTCTGGCTCTGCCCCAGGCTTGCAATGTTCAGACTCCTTCCATCAGCAGCTGCAATGTTGCTTCTCCCACCGGCTCTCCAGCAGGATCACCGGAATCTTCAAACAATGTTCCTTCAGGAACTGGATCTAAGACTGTTCCATCACCAGACAACAACTCATCAGACGGAAGCTCCATCCATTTGTCAAAACCTCTACTATTCTCCATCTTGTTGGCTTCTACATATGCTTCAGCTTTCAAGTTGTACTGATCTTCTTATCAGTGGCCTATCTTCTATAAGTATAGTTCATGGTTGGTCATTTATTGCGTTCAGATTCTTTTGGAGTGTCCTCCCTTTGGTTGAGGGTGTTTTCTATCTTTATATTCTCCTCATGGCATTTGTTTCCAAGAACTTTGTATTGCATCAGAGATTCTTTTGAATAAAATACATGATTCTGTGTTTGTGAGTTCTAAA ATGGCACAGGGAAAGATGGTGATGACTCTGCTTGCCGTTATCGTTGCCGTTCACTGGGCAGGAGCAGCGGCACAGTCGGACTGTACGAATGTGCTGATCAGCTTGTCACCGTGCCTGAATTACATTACAGGGAACTCTTCTACCCCATCACAAGGATGCTGCACACAGCTTGCAACCGTTGTCCGCTCACAACCACAGTGCTTGTGCCAGGTCCTGAATGGTGGTGGTTCCTCGCTTGGGGTCAACATCAACCAAACCCAGGCTCTGGCTCTGCCCCAGGCTTGCAATGTTCAGACTCCTTCCATCAGCAGCTGCAATGTTGCTTCTCCCACCGGCTCTCCAGCAGGATCACCGGAATCTTCAAACAATGTTCCTTCAGGAACTGGATCTAAGACTGTTCCATCACCAGACAACAACTCATCAGACGGAAGCTCCATCCATTTGTCAAAACCTCTACTATTCTCCATCTTGTTGGCTTCTACATATGCTTCAGCTTTCAAGTTGTACTGA MAQGKMVMTLLAVIVAVHWAGAAAQSDCTNVLISLSPCLNYITGNSSTPSQGCCTQLATVVRSQPQCLCQVLNGGGSSLGVNINQTQALALPQACNVQTPSISSCNVASPTGSPAGSPESSNNVPSGTGSKTVPSPDNNSSDGSSIHLSKPLLFSILLASTYASAFKLY
BLAST of Cp4.1LG08g04100 vs. Swiss-Prot
Match: NLTL5_ARATH (Non-specific lipid-transfer protein-like protein At5g64080 OS=Arabidopsis thaliana GN=At5g64080 PE=1 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 7.7e-11 Identity = 46/133 (34.59%), Postives = 81/133 (60.90%), Query Frame = 1
BLAST of Cp4.1LG08g04100 vs. Swiss-Prot
Match: NLTL2_ARATH (Non-specific lipid-transfer protein-like protein At2g13820 OS=Arabidopsis thaliana GN=At2g13820 PE=1 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 1.0e-10 Identity = 48/165 (29.09%), Postives = 88/165 (53.33%), Query Frame = 1
BLAST of Cp4.1LG08g04100 vs. Swiss-Prot
Match: LTPG2_ARATH (Non-specific lipid transfer protein GPI-anchored 2 OS=Arabidopsis thaliana GN=LTPG2 PE=2 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 1.7e-10 Identity = 57/166 (34.34%), Postives = 84/166 (50.60%), Query Frame = 1
BLAST of Cp4.1LG08g04100 vs. Swiss-Prot
Match: XYP11_ARATH (Xylogen-like protein 11 OS=Arabidopsis thaliana GN=XYP11 PE=1 SV=2) HSP 1 Score: 65.9 bits (159), Expect = 5.0e-10 Identity = 39/106 (36.79%), Postives = 62/106 (58.49%), Query Frame = 1
BLAST of Cp4.1LG08g04100 vs. Swiss-Prot
Match: YLS3_ARATH (Protein YLS3 OS=Arabidopsis thaliana GN=YLS3 PE=2 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 5.7e-06 Identity = 45/161 (27.95%), Postives = 73/161 (45.34%), Query Frame = 1
BLAST of Cp4.1LG08g04100 vs. TrEMBL
Match: A0A0A0L5G6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G146490 PE=3 SV=1) HSP 1 Score: 282.3 bits (721), Expect = 3.8e-73 Identity = 147/169 (86.98%), Postives = 157/169 (92.90%), Query Frame = 1
BLAST of Cp4.1LG08g04100 vs. TrEMBL
Match: I3ST82_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 213.8 bits (543), Expect = 1.7e-52 Identity = 118/166 (71.08%), Postives = 138/166 (83.13%), Query Frame = 1
BLAST of Cp4.1LG08g04100 vs. TrEMBL
Match: F6HDR8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g03730 PE=3 SV=1) HSP 1 Score: 213.0 bits (541), Expect = 2.8e-52 Identity = 112/166 (67.47%), Postives = 132/166 (79.52%), Query Frame = 1
BLAST of Cp4.1LG08g04100 vs. TrEMBL
Match: A0A059B3V7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H03442 PE=3 SV=1) HSP 1 Score: 211.1 bits (536), Expect = 1.1e-51 Identity = 114/164 (69.51%), Postives = 129/164 (78.66%), Query Frame = 1
BLAST of Cp4.1LG08g04100 vs. TrEMBL
Match: A0A061EM78_THECC (Non-specific lipid-transfer protein, putative isoform 1 OS=Theobroma cacao GN=TCM_020655 PE=3 SV=1) HSP 1 Score: 208.4 bits (529), Expect = 6.9e-51 Identity = 117/169 (69.23%), Postives = 135/169 (79.88%), Query Frame = 1
BLAST of Cp4.1LG08g04100 vs. TAIR10
Match: AT3G22600.1 (AT3G22600.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein) HSP 1 Score: 154.5 bits (389), Expect = 6.0e-38 Identity = 95/171 (55.56%), Postives = 117/171 (68.42%), Query Frame = 1
BLAST of Cp4.1LG08g04100 vs. TAIR10
Match: AT4G14815.1 (AT4G14815.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein) HSP 1 Score: 132.1 bits (331), Expect = 3.2e-31 Identity = 78/140 (55.71%), Postives = 99/140 (70.71%), Query Frame = 1
BLAST of Cp4.1LG08g04100 vs. TAIR10
Match: AT2G48130.1 (AT2G48130.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein) HSP 1 Score: 114.8 bits (286), Expect = 5.3e-26 Identity = 74/176 (42.05%), Postives = 106/176 (60.23%), Query Frame = 1
BLAST of Cp4.1LG08g04100 vs. TAIR10
Match: AT1G03103.1 (AT1G03103.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein) HSP 1 Score: 108.6 bits (270), Expect = 3.8e-24 Identity = 73/161 (45.34%), Postives = 94/161 (58.39%), Query Frame = 1
BLAST of Cp4.1LG08g04100 vs. TAIR10
Match: AT4G08670.1 (AT4G08670.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein) HSP 1 Score: 74.7 bits (182), Expect = 6.1e-14 Identity = 65/172 (37.79%), Postives = 91/172 (52.91%), Query Frame = 1
BLAST of Cp4.1LG08g04100 vs. NCBI nr
Match: gi|659076387|ref|XP_008438652.1| (PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Cucumis melo]) HSP 1 Score: 283.5 bits (724), Expect = 2.4e-73 Identity = 148/169 (87.57%), Postives = 158/169 (93.49%), Query Frame = 1
BLAST of Cp4.1LG08g04100 vs. NCBI nr
Match: gi|449432688|ref|XP_004134131.1| (PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Cucumis sativus]) HSP 1 Score: 282.3 bits (721), Expect = 5.4e-73 Identity = 147/169 (86.98%), Postives = 157/169 (92.90%), Query Frame = 1
BLAST of Cp4.1LG08g04100 vs. NCBI nr
Match: gi|388510816|gb|AFK43474.1| (unknown [Lotus japonicus]) HSP 1 Score: 213.8 bits (543), Expect = 2.4e-52 Identity = 118/166 (71.08%), Postives = 138/166 (83.13%), Query Frame = 1
BLAST of Cp4.1LG08g04100 vs. NCBI nr
Match: gi|470122153|ref|XP_004297113.1| (PREDICTED: non-specific lipid transfer protein GPI-anchored 2 [Fragaria vesca subsp. vesca]) HSP 1 Score: 213.4 bits (542), Expect = 3.1e-52 Identity = 114/158 (72.15%), Postives = 135/158 (85.44%), Query Frame = 1
BLAST of Cp4.1LG08g04100 vs. NCBI nr
Match: gi|731389274|ref|XP_010649925.1| (PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 isoform X2 [Vitis vinifera]) HSP 1 Score: 213.0 bits (541), Expect = 4.0e-52 Identity = 112/166 (67.47%), Postives = 132/166 (79.52%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|