Cucsa.212580 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.212580
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
Description60S ribosomal protein L32, putative
Locationscaffold01543 : 379072 .. 381123 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAATCGTCGAAGCTGGGACGGCCAAAGGAAACCCTAGTATTTGTGAGTACTTCTCTCCACTCCGCCGCTAGGGTTTCTTTCGTTATTATCCTCTTTGAACAACCTTTACTTGAAAATGTTTCATCATGTAGATTGAGTGTTTCTCCATTGTAGTTCTATTTAGGGTAGATTGGATTTTAGATTTTGCAGGGTTTTGTATTTTTAGTTTCATAGGTTTTTGTATGTTCGTTTGAGCTGCAAATAATCGTACTTGTTTTGATATCTGTAGATATAAGCGAAAATGGCGGTGCCTTTGCTGTCGAAGAAGATCGTGAAGAAGAGGACCCAGAAGTTCAAGAGGCCTCAAAGTGATCGAAAGATCTCCGTCAAGGTATTCTTATGTTTCTTTCTCTTTTCGTTTTGTCTATGTACGTATGTCGTAGGATTTGCAATAAGGAAGATGATGATATGTATTGTCGCCCCAGTCTTAGTTGCATCTTTGGATGCACTATGGTGATTGACCAGTATCTGATTCTTGTTGTAGTTAGCAGCTCATTCATTCTAATTTTTTtGTTGAAGATAGTTTCATTAGGCTTTCTGTTTGTAGCAATTTTGTGTTTTGCCGAGGCTTGTTTAGTTGGATCTGATGATAATATGACATCAGTCTGACCGGTGTCTTTGGATTCAATCTGATGAAACAAAGATCGACTATCTGATCCTTCTGTCGGAGTTAATTGATTTAAGTAACTTGTTAGGCTTAGTCTTTACCTCTTGATGAAAAATCAAGTTCAACGTTTTTTGTGTTCTCATTAAACAGTGTACTTAGAAATTAATTATAATTTCTATATTTTTCATTAGATATACAACAAGGCGTGATGATTATAACCCATCATTTCTGCATTTGAATGATGAATATTTTCATGCACTACCATCTGATCTTCGTTGTAATATCTCATTTCTTGTATTATTTTAAACACATTTtATTTTTTTtAATTTTAACTCGTAACTTATGGCTGCAATCTATGATGCAAAATACCCAATCTCCTGATTTCTAGTGATTATATAATCAAATTTCACCATCTTTCGGCTGAGGTTGCAGTACATATACATGTTCTTTGTTTTTCAACAGTTTATTAATTTCTTTAGTTTTGCATCTTAAATAGCCCGTGGTATCTAATGTCCAGACCATTTGATGGTTGGATGTTTCGTTTTGAGGGCTTAGAGTAATAAAACACAGGTCTTTGCGACACAGTTAGCTTCTTATATACACAAGCTTTCTGTTACTTAAACCCTGCGTACATACTGTAATGATGACTCTTCCATTCTCTATCACACAATCAATTCATGTGTGCTTACCTTTTATTATTCACGTTTCAGGAAAACTGGAGAAGACCAAAAGGTATTGATTCCAGAGTTAGAAGAAAGTTTAAAGGATGCACATTGATGCCCAATATTGGTTACGGTACTGACAAGAAGACCCGTCACTACCTGCCTAATGGGTTCAAGAAGTTTGTCGTTCATAATGTCAATGAGCTCGAACTCTTGATGATGCACAACAGGTTTGTGCAAGAGTCTTGTGTGCAATTATTCTAAAATTTTGGATTTGTTGTCTTTGTTTGATGTATATTTGTTTTTATTTCAGAACTTACTGTGCTGAGATCGCCCATGATGTTTCAACAAAGAAAAGAAAaGAGATTGTTGAGAGGGCAGCACAACTTGATGTTGTAGTTACGAACAAGCTTGCAAGGTTGCGCAGCCAAGAAGATGAATGAACAATTTAGATCCTTGAATGCCAGTTTTTTCATCCTGCTTTGTAGTGAGATTTCGTTAATATATATCCTTTTTTTGGTTCAAGTGATTTTGGTTTTTGCATGACCTTCTGAATTTTCACAATTTGTCACTTAATACATTATAATTTTGAACTTATTTATGAGATGTTTGAATTTTGAAGTTTAGTTTCATATCATTGCATGGTCGACGGCGTTGGTCCCATTTGCTGTCGTTGTGAGATTTAAAATCTATATTCTTTTGTAAATGAGAGTAGGCAATAATATAAAGCTTTGATAAAACGTG

mRNA sequence

AAATCGTCGAAGCTGGGACGGCCAAAGGAAACCCTAGTATTTATATAAGCGAAAATGGCGGTGCCTTTGCTGTCGAAGAAGATCGTGAAGAAGAGGACCCAGAAGTTCAAGAGGCCTCAAAGTGATCGAAAGATCTCCGTCAAGGAAAACTGGAGAAGACCAAAAGGTATTGATTCCAGAGTTAGAAGAAAGTTTAAAGGATGCACATTGATGCCCAATATTGGTTACGGTACTGACAAGAAGACCCGTCACTACCTGCCTAATGGGTTCAAGAAGTTTGTCGTTCATAATGTCAATGAGCTCGAACTCTTGATGATGCACAACAGAACTTACTGTGCTGAGATCGCCCATGATGTTTCAACAAAGAAAAGAAAAGAGATTGTTGAGAGGGCAGCACAACTTGATGTTGTAGTTACGAACAAGCTTGCAAGGTTGCGCAGCCAAGAAGATGAATGAACAATTTAGATCCTTGAATGCCAGTTTTTTCATCCTGCTTTGTAGTGAGATTTCGTTAATATATATCCTTTTTTTGGTTCAAGTGATTTTGGTTTTTGCATGACCTTCTGAATTTTCACAATTTGTCACTTAATACATTATAATTTTGAACTTATTTATGAGATGTTTGAATTTTGAAGTTTAGTTTCATATCATTGCATGGTCGACGGCGTTGGTCCCATTTGCTGTCGTTGTGAGATTTAAAATCTATATTCTTTTGTAAATGAGAGTAGGCAATAATATAAAGCTTTGATAAAACGTG

Coding sequence (CDS)

ATGGCGGTGCCTTTGCTGTCGAAGAAGATCGTGAAGAAGAGGACCCAGAAGTTCAAGAGGCCTCAAAGTGATCGAAAGATCTCCGTCAAGGAAAACTGGAGAAGACCAAAAGGTATTGATTCCAGAGTTAGAAGAAAGTTTAAAGGATGCACATTGATGCCCAATATTGGTTACGGTACTGACAAGAAGACCCGTCACTACCTGCCTAATGGGTTCAAGAAGTTTGTCGTTCATAATGTCAATGAGCTCGAACTCTTGATGATGCACAACAGAACTTACTGTGCTGAGATCGCCCATGATGTTTCAACAAAGAAAAGAAAaGAGATTGTTGAGAGGGCAGCACAACTTGATGTTGTAGTTACGAACAAGCTTGCAAGGTTGCGCAGCCAAGAAGATGAATGA

Protein sequence

MAVPLLSKKIVKKRTQKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVVTNKLARLRSQEDE*
Homology
[Close]
BLAST of Cucsa.212580 vs. Swiss-Prot
Match: RL321_ARATH (60S ribosomal protein L32-1 OS=Arabidopsis thaliana GN=RPL32A PE=2 SV=2)

HSP 1 Score: 241.5 bits (615), Expect = 5.3e-63
Identity = 116/133 (87.22%), Postives = 128/133 (96.24%), Query Frame = 1 

Query: 1   MAVPLLSKKIVKKRTQKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60
           MAVPLL+KK+VKKR+ KF RPQSDR+I+VKE+WRRPKGIDSRVRRKFKG TLMPN+GYG+
Sbjct: 1   MAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHN +ELELLMMHNRTYCAEIAH+VSTKKRK IVERA+QLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNTSELELLMMHNRTYCAEIAHNVSTKKRKAIVERASQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           TN+LARLRSQEDE
Sbjct: 121 TNRLARLRSQEDE 133

[Close]
BLAST of Cucsa.212580 vs. Swiss-Prot
Match: RL322_ARATH (60S ribosomal protein L32-2 OS=Arabidopsis thaliana GN=RPL32B PE=2 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 3.4e-62
Identity = 113/133 (84.96%), Postives = 127/133 (95.49%), Query Frame = 1 

Query: 1   MAVPLLSKKIVKKRTQKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60
           MAVPLL+KK+VKKR+ KF RPQSDR+I+VKE+WRRPKGIDSRVRRKFKG TLMPN+GYG+
Sbjct: 1   MAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKF+VHN +ELELLMMHNRTYCAEIAH++STKKRK IVERA+QLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFIVHNTSELELLMMHNRTYCAEIAHNISTKKRKAIVERASQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           +NKL RLRSQEDE
Sbjct: 121 SNKLGRLRSQEDE 133

[Close]
BLAST of Cucsa.212580 vs. Swiss-Prot
Match: RL32_CANLF (60S ribosomal protein L32 OS=Canis lupus familiaris GN=RPL32 PE=1 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 6.9e-47
Identity = 89/130 (68.46%), Postives = 112/130 (86.15%), Query Frame = 1 

Query: 4   PLLSKKIVKKRTQKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKK 63
           PL+  KIVKKRT+KF R QSDR + +K NWR+P+GID+RVRR+FKG  LMPNIGYG++KK
Sbjct: 6   PLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKK 65

Query: 64  TRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVVTNK 123
           T+H LP+GF+KF+VHNV ELE+L+M N++YCAEIAH+VS+K RK IVERAAQL + VTN 
Sbjct: 66  TKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNP 125

Query: 124 LARLRSQEDE 134
            ARLRS+E+E
Sbjct: 126 NARLRSEENE 135

[Close]
BLAST of Cucsa.212580 vs. Swiss-Prot
Match: RL32_HUMAN (60S ribosomal protein L32 OS=Homo sapiens GN=RPL32 PE=1 SV=2)

HSP 1 Score: 188.0 bits (476), Expect = 6.9e-47
Identity = 89/130 (68.46%), Postives = 112/130 (86.15%), Query Frame = 1 

Query: 4   PLLSKKIVKKRTQKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKK 63
           PL+  KIVKKRT+KF R QSDR + +K NWR+P+GID+RVRR+FKG  LMPNIGYG++KK
Sbjct: 6   PLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKK 65

Query: 64  TRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVVTNK 123
           T+H LP+GF+KF+VHNV ELE+L+M N++YCAEIAH+VS+K RK IVERAAQL + VTN 
Sbjct: 66  TKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNP 125

Query: 124 LARLRSQEDE 134
            ARLRS+E+E
Sbjct: 126 NARLRSEENE 135

[Close]
BLAST of Cucsa.212580 vs. Swiss-Prot
Match: RL32_MACFA (60S ribosomal protein L32 OS=Macaca fascicularis GN=RPL32 PE=2 SV=3)

HSP 1 Score: 188.0 bits (476), Expect = 6.9e-47
Identity = 89/130 (68.46%), Postives = 112/130 (86.15%), Query Frame = 1 

Query: 4   PLLSKKIVKKRTQKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKK 63
           PL+  KIVKKRT+KF R QSDR + +K NWR+P+GID+RVRR+FKG  LMPNIGYG++KK
Sbjct: 6   PLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKK 65

Query: 64  TRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVVTNK 123
           T+H LP+GF+KF+VHNV ELE+L+M N++YCAEIAH+VS+K RK IVERAAQL + VTN 
Sbjct: 66  TKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNP 125

Query: 124 LARLRSQEDE 134
            ARLRS+E+E
Sbjct: 126 NARLRSEENE 135

[Close]
BLAST of Cucsa.212580 vs. TrEMBL
Match: A0A0A0LXN1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G462020 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 1.5e-69
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 1 

Query: 1   MAVPLLSKKIVKKRTQKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60
           MAVPLLSKKIVKKRTQKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGT
Sbjct: 1   MAVPLLSKKIVKKRTQKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60

Query: 61  DKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           TNKLARLRSQEDE
Sbjct: 121 TNKLARLRSQEDE 133

[Close]
BLAST of Cucsa.212580 vs. TrEMBL
Match: B9S183_RICCO (60S ribosomal protein L32, putative OS=Ricinus communis GN=RCOM_0634780 PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 2.5e-67
Identity = 129/133 (96.99%), Postives = 131/133 (98.50%), Query Frame = 1 

Query: 1   MAVPLLSKKIVKKRTQKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60
           MAVPLLSKKIVKKR +KFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYG+
Sbjct: 1   MAVPLLSKKIVKKRVKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNV ELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVQELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           TNKLARLRSQEDE
Sbjct: 121 TNKLARLRSQEDE 133

[Close]
BLAST of Cucsa.212580 vs. TrEMBL
Match: A0A067JMH6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21666 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 5.5e-67
Identity = 128/133 (96.24%), Postives = 131/133 (98.50%), Query Frame = 1 

Query: 1   MAVPLLSKKIVKKRTQKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60
           MAVPLLSKKIVKKR +KFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYG+
Sbjct: 1   MAVPLLSKKIVKKRVKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNV ELELLMMHNRTYCAEIAHDVST+KRKEIVERAAQLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVGELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           TNKLARLRSQEDE
Sbjct: 121 TNKLARLRSQEDE 133

[Close]
BLAST of Cucsa.212580 vs. TrEMBL
Match: A0A0D2PPK2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G103000 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 1.2e-66
Identity = 128/133 (96.24%), Postives = 130/133 (97.74%), Query Frame = 1 

Query: 1   MAVPLLSKKIVKKRTQKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60
           MAVPLLSKKIVKKR +KFKRPQSDRKISVK NWRRPKGIDSRVRRKFKGCTLMPNIGYG+
Sbjct: 1   MAVPLLSKKIVKKRVKKFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNV ELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVQELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           TNKLARLRSQEDE
Sbjct: 121 TNKLARLRSQEDE 133

[Close]
BLAST of Cucsa.212580 vs. TrEMBL
Match: A0A0B0PYZ4_GOSAR (60S ribosomal L32-1-like protein OS=Gossypium arboreum GN=F383_05631 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 1.2e-66
Identity = 128/133 (96.24%), Postives = 130/133 (97.74%), Query Frame = 1 

Query: 1   MAVPLLSKKIVKKRTQKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60
           MAVPLLSKKIVKKR +KFKRPQSDRKISVK NWRRPKGIDSRVRRKFKGCTLMPNIGYG+
Sbjct: 1   MAVPLLSKKIVKKRVKKFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNV ELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVQELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           TNKLARLRSQEDE
Sbjct: 121 TNKLARLRSQEDE 133

[Close]
BLAST of Cucsa.212580 vs. TAIR10
Match: AT4G18100.1 (AT4G18100.1 Ribosomal protein L32e)

HSP 1 Score: 241.5 bits (615), Expect = 3.0e-64
Identity = 116/133 (87.22%), Postives = 128/133 (96.24%), Query Frame = 1 

Query: 1   MAVPLLSKKIVKKRTQKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60
           MAVPLL+KK+VKKR+ KF RPQSDR+I+VKE+WRRPKGIDSRVRRKFKG TLMPN+GYG+
Sbjct: 1   MAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHN +ELELLMMHNRTYCAEIAH+VSTKKRK IVERA+QLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNTSELELLMMHNRTYCAEIAHNVSTKKRKAIVERASQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           TN+LARLRSQEDE
Sbjct: 121 TNRLARLRSQEDE 133

[Close]
BLAST of Cucsa.212580 vs. TAIR10
Match: AT5G46430.1 (AT5G46430.1 Ribosomal protein L32e)

HSP 1 Score: 238.8 bits (608), Expect = 1.9e-63
Identity = 113/133 (84.96%), Postives = 127/133 (95.49%), Query Frame = 1 

Query: 1   MAVPLLSKKIVKKRTQKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60
           MAVPLL+KK+VKKR+ KF RPQSDR+I+VKE+WRRPKGIDSRVRRKFKG TLMPN+GYG+
Sbjct: 1   MAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKF+VHN +ELELLMMHNRTYCAEIAH++STKKRK IVERA+QLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFIVHNTSELELLMMHNRTYCAEIAHNISTKKRKAIVERASQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           +NKL RLRSQEDE
Sbjct: 121 SNKLGRLRSQEDE 133

[Close]
BLAST of Cucsa.212580 vs. NCBI nr
Match: gi|778661080|ref|XP_011657475.1| (PREDICTED: 60S ribosomal protein L32-1 [Cucumis sativus])

HSP 1 Score: 270.0 bits (689), Expect = 2.2e-69
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 1 

Query: 1   MAVPLLSKKIVKKRTQKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60
           MAVPLLSKKIVKKRTQKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGT
Sbjct: 1   MAVPLLSKKIVKKRTQKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60

Query: 61  DKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           TNKLARLRSQEDE
Sbjct: 121 TNKLARLRSQEDE 133

[Close]
BLAST of Cucsa.212580 vs. NCBI nr
Match: gi|659068321|ref|XP_008443854.1| (PREDICTED: 60S ribosomal protein L32-1 [Cucumis melo])

HSP 1 Score: 268.5 bits (685), Expect = 6.4e-69
Identity = 132/133 (99.25%), Postives = 133/133 (100.00%), Query Frame = 1 

Query: 1   MAVPLLSKKIVKKRTQKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60
           MAVPLLSKKIVKKRT+KFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGT
Sbjct: 1   MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60

Query: 61  DKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           TNKLARLRSQEDE
Sbjct: 121 TNKLARLRSQEDE 133

[Close]
BLAST of Cucsa.212580 vs. NCBI nr
Match: gi|802546482|ref|XP_012085082.1| (PREDICTED: 60S ribosomal protein L32-1 [Jatropha curcas])

HSP 1 Score: 263.8 bits (673), Expect = 1.6e-67
Identity = 129/133 (96.99%), Postives = 132/133 (99.25%), Query Frame = 1 

Query: 1   MAVPLLSKKIVKKRTQKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60
           MAVPLLSKKIVKKR +KFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYG+
Sbjct: 1   MAVPLLSKKIVKKRVKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVST+KRKEIVERAAQLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           TNKLARLRSQEDE
Sbjct: 121 TNKLARLRSQEDE 133

[Close]
BLAST of Cucsa.212580 vs. NCBI nr
Match: gi|255557443|ref|XP_002519752.1| (PREDICTED: 60S ribosomal protein L32-1 [Ricinus communis])

HSP 1 Score: 262.7 bits (670), Expect = 3.5e-67
Identity = 129/133 (96.99%), Postives = 131/133 (98.50%), Query Frame = 1 

Query: 1   MAVPLLSKKIVKKRTQKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60
           MAVPLLSKKIVKKR +KFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYG+
Sbjct: 1   MAVPLLSKKIVKKRVKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNV ELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVQELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           TNKLARLRSQEDE
Sbjct: 121 TNKLARLRSQEDE 133

[Close]
BLAST of Cucsa.212580 vs. NCBI nr
Match: gi|802787249|ref|XP_012091879.1| (PREDICTED: 60S ribosomal protein L32-1-like [Jatropha curcas])

HSP 1 Score: 261.5 bits (667), Expect = 7.9e-67
Identity = 128/133 (96.24%), Postives = 131/133 (98.50%), Query Frame = 1 

Query: 1   MAVPLLSKKIVKKRTQKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60
           MAVPLLSKKIVKKR +KFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYG+
Sbjct: 1   MAVPLLSKKIVKKRVKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNV ELELLMMHNRTYCAEIAHDVST+KRKEIVERAAQLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVGELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           TNKLARLRSQEDE
Sbjct: 121 TNKLARLRSQEDE 133

The following BLAST results are available for this feature:
BLAST of Cucsa.212580 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RL321_ARATH5.3e-6387.2260S ribosomal protein L32-1 OS=Arabidopsis thaliana GN=RPL32A PE=2 SV=2[more]
RL322_ARATH3.4e-6284.9660S ribosomal protein L32-2 OS=Arabidopsis thaliana GN=RPL32B PE=2 SV=1[more]
RL32_CANLF6.9e-4768.4660S ribosomal protein L32 OS=Canis lupus familiaris GN=RPL32 PE=1 SV=1[more]
RL32_HUMAN6.9e-4768.4660S ribosomal protein L32 OS=Homo sapiens GN=RPL32 PE=1 SV=2[more]
RL32_MACFA6.9e-4768.4660S ribosomal protein L32 OS=Macaca fascicularis GN=RPL32 PE=2 SV=3[more]
BLAST of Cucsa.212580 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LXN1_CUCSA1.5e-69100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G462020 PE=4 SV=1[more]
B9S183_RICCO2.5e-6796.9960S ribosomal protein L32, putative OS=Ricinus communis GN=RCOM_0634780 PE=4 SV=... [more]
A0A067JMH6_JATCU5.5e-6796.24Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21666 PE=4 SV=1[more]
A0A0D2PPK2_GOSRA1.2e-6696.24Uncharacterized protein OS=Gossypium raimondii GN=B456_001G103000 PE=4 SV=1[more]
A0A0B0PYZ4_GOSAR1.2e-6696.2460S ribosomal L32-1-like protein OS=Gossypium arboreum GN=F383_05631 PE=4 SV=1[more]
BLAST of Cucsa.212580 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G18100.13.0e-6487.22 Ribosomal protein L32e[more]
AT5G46430.11.9e-6384.96 Ribosomal protein L32e[more]
BLAST of Cucsa.212580 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778661080|ref|XP_011657475.1|2.2e-69100.00PREDICTED: 60S ribosomal protein L32-1 [Cucumis sativus][more]
gi|659068321|ref|XP_008443854.1|6.4e-6999.25PREDICTED: 60S ribosomal protein L32-1 [Cucumis melo][more]
gi|802546482|ref|XP_012085082.1|1.6e-6796.99PREDICTED: 60S ribosomal protein L32-1 [Jatropha curcas][more]
gi|255557443|ref|XP_002519752.1|3.5e-6796.99PREDICTED: 60S ribosomal protein L32-1 [Ricinus communis][more]
gi|802787249|ref|XP_012091879.1|7.9e-6796.24PREDICTED: 60S ribosomal protein L32-1-like [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001515Ribosomal_L32e
IPR001515Ribosomal_L32e
IPR001515Ribosomal_L32e
IPR001515Ribosomal_L32e
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
GO:0003735structural constituent of ribosome
GO:0003735structural constituent of ribosome
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0005840ribosome
GO:0005622intracellular
GO:0005840ribosome
GO:0005622intracellular
GO:0005840ribosome
GO:0005622intracellular
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO:0006412translation
GO:0006412translation
GO:0006412translation
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
cellular_component GO:0005622 intracellular
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.212580.1Cucsa.212580.1mRNA
Cucsa.212580.2Cucsa.212580.2mRNA
Cucsa.212580.3Cucsa.212580.3mRNA
Cucsa.212580.4Cucsa.212580.4mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001515Ribosomal protein L32ePRODOMPD003823coord: 8..103
score: 3.0
IPR001515Ribosomal protein L32ePFAMPF01655Ribosomal_L32ecoord: 10..103
score: 2.5
IPR001515Ribosomal protein L32eSMARTSM01393Ribosomal_L32e_2coord: 5..103
score: 4.3
IPR001515Ribosomal protein L32eunknownSSF52042Ribosomal protein L32ecoord: 10..112
score: 1.96
NoneNo IPR availablePANTHERPTHR2341360S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT Ncoord: 12..114
score: 9.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.212580Cla009740Watermelon (97103) v1cgywmB411
Cucsa.212580Cla019619Watermelon (97103) v1cgywmB408
Cucsa.212580Csa6G521090Cucumber (Chinese Long) v2cgycuB316
Cucsa.212580Csa1G462020Cucumber (Chinese Long) v2cgycuB315
Cucsa.212580MELO3C007167Melon (DHL92) v3.5.1cgymeB378
Cucsa.212580MELO3C002703Melon (DHL92) v3.5.1cgymeB375
Cucsa.212580ClCG01G024240Watermelon (Charleston Gray)cgywcgB384
Cucsa.212580ClCG03G007200Watermelon (Charleston Gray)cgywcgB388
Cucsa.212580CSPI01G21590Wild cucumber (PI 183967)cgycpiB328
Cucsa.212580CSPI06G35930Wild cucumber (PI 183967)cgycpiB329
Cucsa.212580CmaCh18G004510Cucurbita maxima (Rimu)cgycmaB0614
Cucsa.212580CmaCh07G001430Cucurbita maxima (Rimu)cgycmaB0619
Cucsa.212580CmaCh13G005680Cucurbita maxima (Rimu)cgycmaB0612
Cucsa.212580CmaCh03G013660Cucurbita maxima (Rimu)cgycmaB0618
Cucsa.212580CmoCh18G004260Cucurbita moschata (Rifu)cgycmoB0616
Cucsa.212580CmoCh13G005970Cucurbita moschata (Rifu)cgycmoB0614
Cucsa.212580CmoCh07G001400Cucurbita moschata (Rifu)cgycmoB0620
Cucsa.212580CmoCh03G013620Cucurbita moschata (Rifu)cgycmoB0619
Cucsa.212580Lsi02G008550Bottle gourd (USVL1VR-Ls)cgylsiB358
Cucsa.212580Lsi01G001840Bottle gourd (USVL1VR-Ls)cgylsiB357
Cucsa.212580Cp4.1LG09g07730Cucurbita pepo (Zucchini)cgycpeB0585
Cucsa.212580Cp4.1LG10g05880Cucurbita pepo (Zucchini)cgycpeB0586
Cucsa.212580Cp4.1LG19g06210Cucurbita pepo (Zucchini)cgycpeB0588
Cucsa.212580Cp4.1LG20g04890Cucurbita pepo (Zucchini)cgycpeB0590
Cucsa.212580MELO3C002703.2Melon (DHL92) v3.6.1cgymedB373
Cucsa.212580MELO3C007167.2Melon (DHL92) v3.6.1cgymedB376
Cucsa.212580CsaV3_1G032790Cucumber (Chinese Long) v3cgycucB333
Cucsa.212580CsaV3_6G051400Cucumber (Chinese Long) v3cgycucB334
Cucsa.212580Cla97C01G024200Watermelon (97103) v2cgywmbB387
Cucsa.212580Cla97C03G058440Watermelon (97103) v2cgywmbB390
Cucsa.212580Bhi03G000035Wax gourdcgywgoB439
Cucsa.212580Bhi08G001739Wax gourdcgywgoB440
Cucsa.212580Carg15383Silver-seed gourdcarcgyB0626
Cucsa.212580Carg23086Silver-seed gourdcarcgyB1076
Cucsa.212580Carg14552Silver-seed gourdcarcgyB0184
Cucsa.212580Carg19912Silver-seed gourdcarcgyB0913
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cucsa.212580Cucsa.047410Cucumber (Gy14) v1cgycgyB007
The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.212580Watermelon (97103) v2cgywmbB389
Cucsa.212580Wax gourdcgywgoB437
Cucsa.212580Watermelon (97103) v1cgywmB413
Cucsa.212580Bottle gourd (USVL1VR-Ls)cgylsiB355