Carg19912 (gene) Silver-seed gourd

Overview
NameCarg19912
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Description60S ribosomal protein L32, putative
LocationCucurbita_argyrosperma_scaffold_108 : 227458 .. 228938 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAATGGCGGTGCCTTTGCTGTCGAAGAAGATCGTGAAGAAGAGGACCCAGAAGTTCAAGAGGCCTCAAAGTGATCGAAAGATCTCCGTCAAGGTATTTTAATTTTCTTTGGCTTTTCGTCCCATCTATTTGTCTTTACCATAGAATGTGAAATAAGGAAGATGATGATATGTATTGTCGCCCCAGTCTTAGTTGCATCTATTGATGCACGATGGTGACTGACAGAGTATCTGATTTGTTTATACTATTGAATGTGCAATAAGGAAGATGATGATATGTATTGTCGCCCCAGTCTTAGTTGCATCTATTGATGTGCACGGTGGTGACTGACAGAGTATCTGATTCTTGTTGTTAACAGCACATTTATTCTGATTTGAGTTTAGAAGATACTATTACTTGGTTTTCGGTTTTTATTTTTGAATTATATTGGTTGAGGTTTGGTGTCGTTGGATGGATCTGATGATAGACTAACAACCATGCTGACTTGTGTACTTGGCACTTATTTTCCCCTAGAGATGCAACAAGGCGTGATGATGATAACCCATCATTTCTGCACTTGAATGATGATAATCTCATGCACTACCATCTGATCTTTGTTGTATTTTCCATTCTTTTATTAGTGATAAAGCGTTATTTATAATTAGTTTTGTAGCACGTAGTTTTCCCGGAAGACATGCAACTAGGCGTGATGATGATAACCCATCATTTCTGTACTTGAATGATGAATATTTTCATGCACTACCATCTGATCTTCGTTGTATGTTCCATTCTTTTATTAGTTTCATCATCTTTTGAATGATGTTGCATTTTAGTTTTTATTTTCTTTGATCATTTAATGTTCTCTTTGGCTATATATATGAAGCCGCCCATGGTATCTAATGTCCAGTCTTTAATTTAAATGGCTGGACATCTCGTTTTTAGGGCGAAGATGAATTATATTCAGGTCTTTGCGACACAGTTTGCTTAAAAACGTATAAGCTTTCTGTTACTGAAACCCTGTGTACAGTTCTGTTGTTTATCTACCTTCGTCTTTCATCTATTGTTGGCGAACAATTCGGCTTTTTCTAATCTCTTTTGTTCATCCAATAGGAAAGCTGGAGAAGGCCAAAGGGTATTGATTCCAGAGTTCGAAGAAAGTTCAAAGGATGTACGTTGATGCCAAATATTGGTTATGGCACCGACAAAAAGACCCGCCACTACTTGCCTAATGGGTTTAAGAAGTTCGTTGTTCACAATGTCAAGGAGCTCGAAATCTTGATGATGCACAATAGGTATTTAGAAACTTCCAATGTGGGACTAAAATTGTTTGTATATGTTGCCATTTATCTCAAGCTTTTGTGTTCTTTTACCTATAGGACCTACTGTGCCGAGATTGCCCACGATGTTTCCACAAAGAAGAGGAAAGAGATTGTTGAGAGGGCAGCTCAACTTGATGTGGTAGTCACCAACAAGCTCGCTAGGTTACGCAGCCAAGAGGATGAA

mRNA sequence

AAATGGCGGTGCCTTTGCTGTCGAAGAAGATCGTGAAGAAGAGGACCCAGAAGTTCAAGAGGCCTCAAAGTGATCGAAAGATCTCCGTCAAGGAAAGCTGGAGAAGGCCAAAGGGTATTGATTCCAGAGTTCGAAGAAAGTTCAAAGGATGTACGTTGATGCCAAATATTGGTTATGGCACCGACAAAAAGACCCGCCACTACTTGCCTAATGGGTTTAAGAAGTTCGTTGTTCACAATGTCAAGGAGCTCGAAATCTTGATGATGCACAATAGGACCTACTGTGCCGAGATTGCCCACGATGTTTCCACAAAGAAGAGGAAAGAGATTGTTGAGAGGGCAGCTCAACTTGATGTGGTAGTCACCAACAAGCTCGCTAGGTTACGCAGCCAAGAGGATGAA

Coding sequence (CDS)

ATGGCGGTGCCTTTGCTGTCGAAGAAGATCGTGAAGAAGAGGACCCAGAAGTTCAAGAGGCCTCAAAGTGATCGAAAGATCTCCGTCAAGGAAAGCTGGAGAAGGCCAAAGGGTATTGATTCCAGAGTTCGAAGAAAGTTCAAAGGATGTACGTTGATGCCAAATATTGGTTATGGCACCGACAAAAAGACCCGCCACTACTTGCCTAATGGGTTTAAGAAGTTCGTTGTTCACAATGTCAAGGAGCTCGAAATCTTGATGATGCACAATAGGACCTACTGTGCCGAGATTGCCCACGATGTTTCCACAAAGAAGAGGAAAGAGATTGTTGAGAGGGCAGCTCAACTTGATGTGGTAGTCACCAACAAGCTCGCTAGGTTACGCAGCCAAGAGGATGAA

Protein sequence

MAVPLLSKKIVKKRTQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEILMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVVTNKLARLRSQEDE
Homology
[Close]
BLAST of Carg19912 vs. NCBI nr
Match: XP_022927470.1 (60S ribosomal protein L32-1 [Cucurbita moschata] >XP_022927471.1 60S ribosomal protein L32-1 [Cucurbita moschata] >XP_023001487.1 60S ribosomal protein L32-1 [Cucurbita maxima] >XP_023001488.1 60S ribosomal protein L32-1 [Cucurbita maxima])

HSP 1 Score: 262.3 bits (669), Expect = 8.9e-67
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0 

Query: 1   MAVPLLSKKIVKKRTQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60
           MAVPLLSKKIVKKRTQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGT
Sbjct: 1   MAVPLLSKKIVKKRTQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60

Query: 61  DKKTRHYLPNGFKKFVVHNVKELEILMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNVKELEILMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVKELEILMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           TNKLARLRSQEDE
Sbjct: 121 TNKLARLRSQEDE 133

[Close]
BLAST of Carg19912 vs. NCBI nr
Match: XP_023519489.1 (60S ribosomal protein L32-1-like [Cucurbita pepo subsp. pepo] >XP_023519490.1 60S ribosomal protein L32-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 261.9 bits (668), Expect = 1.2e-66
Identity = 132/133 (99.25%), Postives = 133/133 (100.00%), Query Frame = 0 

Query: 1   MAVPLLSKKIVKKRTQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60
           MAVPLLSKK+VKKRTQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGT
Sbjct: 1   MAVPLLSKKVVKKRTQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60

Query: 61  DKKTRHYLPNGFKKFVVHNVKELEILMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNVKELEILMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVKELEILMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           TNKLARLRSQEDE
Sbjct: 121 TNKLARLRSQEDE 133

[Close]
BLAST of Carg19912 vs. NCBI nr
Match: XP_011657475.1 (PREDICTED: 60S ribosomal protein L32-1 [Cucumis sativus] >KGN65577.1 hypothetical protein Csa_1G462020 [Cucumis sativus])

HSP 1 Score: 258.5 bits (659), Expect = 1.3e-65
Identity = 130/133 (97.74%), Postives = 132/133 (99.25%), Query Frame = 0 

Query: 1   MAVPLLSKKIVKKRTQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60
           MAVPLLSKKIVKKRTQKFKRPQSDRKISVKE+WRRPKGIDSRVRRKFKGCTLMPNIGYGT
Sbjct: 1   MAVPLLSKKIVKKRTQKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60

Query: 61  DKKTRHYLPNGFKKFVVHNVKELEILMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNV ELE+LMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           TNKLARLRSQEDE
Sbjct: 121 TNKLARLRSQEDE 133

[Close]
BLAST of Carg19912 vs. NCBI nr
Match: XP_022140193.1 (60S ribosomal protein L32-1 [Momordica charantia] >XP_022140194.1 60S ribosomal protein L32-1 [Momordica charantia])

HSP 1 Score: 257.7 bits (657), Expect = 2.2e-65
Identity = 129/133 (96.99%), Postives = 132/133 (99.25%), Query Frame = 0 

Query: 1   MAVPLLSKKIVKKRTQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60
           MAVPLL+KKIVKKR QKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGT
Sbjct: 1   MAVPLLTKKIVKKRAQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60

Query: 61  DKKTRHYLPNGFKKFVVHNVKELEILMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNVKELE+LMMHNRTYCAEIAHDVST+KRKEIVERAAQLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           TNKLARLRSQEDE
Sbjct: 121 TNKLARLRSQEDE 133

[Close]
BLAST of Carg19912 vs. NCBI nr
Match: XP_008443854.1 (PREDICTED: 60S ribosomal protein L32-1 [Cucumis melo])

HSP 1 Score: 256.9 bits (655), Expect = 3.7e-65
Identity = 129/133 (96.99%), Postives = 132/133 (99.25%), Query Frame = 0 

Query: 1   MAVPLLSKKIVKKRTQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60
           MAVPLLSKKIVKKRT+KFKRPQSDRKISVKE+WRRPKGIDSRVRRKFKGCTLMPNIGYGT
Sbjct: 1   MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60

Query: 61  DKKTRHYLPNGFKKFVVHNVKELEILMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNV ELE+LMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           TNKLARLRSQEDE
Sbjct: 121 TNKLARLRSQEDE 133

[Close]
BLAST of Carg19912 vs. TAIR10
Match: AT4G18100.1 (Ribosomal protein L32e)

HSP 1 Score: 235.0 bits (598), Expect = 2.8e-62
Identity = 116/133 (87.22%), Postives = 127/133 (95.49%), Query Frame = 0 

Query: 1   MAVPLLSKKIVKKRTQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60
           MAVPLL+KK+VKKR+ KF RPQSDR+I+VKESWRRPKGIDSRVRRKFKG TLMPN+GYG+
Sbjct: 1   MAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVHNVKELEILMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHN  ELE+LMMHNRTYCAEIAH+VSTKKRK IVERA+QLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNTSELELLMMHNRTYCAEIAHNVSTKKRKAIVERASQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           TN+LARLRSQEDE
Sbjct: 121 TNRLARLRSQEDE 133

[Close]
BLAST of Carg19912 vs. TAIR10
Match: AT5G46430.1 (Ribosomal protein L32e)

HSP 1 Score: 232.3 bits (591), Expect = 1.8e-61
Identity = 113/133 (84.96%), Postives = 126/133 (94.74%), Query Frame = 0 

Query: 1   MAVPLLSKKIVKKRTQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60
           MAVPLL+KK+VKKR+ KF RPQSDR+I+VKESWRRPKGIDSRVRRKFKG TLMPN+GYG+
Sbjct: 1   MAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVHNVKELEILMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKF+VHN  ELE+LMMHNRTYCAEIAH++STKKRK IVERA+QLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFIVHNTSELELLMMHNRTYCAEIAHNISTKKRKAIVERASQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           +NKL RLRSQEDE
Sbjct: 121 SNKLGRLRSQEDE 133

[Close]
BLAST of Carg19912 vs. Swiss-Prot
Match: sp|P49211|RL321_ARATH (60S ribosomal protein L32-1 OS=Arabidopsis thaliana OX=3702 GN=RPL32A PE=2 SV=2)

HSP 1 Score: 235.0 bits (598), Expect = 5.0e-61
Identity = 116/133 (87.22%), Postives = 127/133 (95.49%), Query Frame = 0 

Query: 1   MAVPLLSKKIVKKRTQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60
           MAVPLL+KK+VKKR+ KF RPQSDR+I+VKESWRRPKGIDSRVRRKFKG TLMPN+GYG+
Sbjct: 1   MAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVHNVKELEILMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHN  ELE+LMMHNRTYCAEIAH+VSTKKRK IVERA+QLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNTSELELLMMHNRTYCAEIAHNVSTKKRKAIVERASQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           TN+LARLRSQEDE
Sbjct: 121 TNRLARLRSQEDE 133

[Close]
BLAST of Carg19912 vs. Swiss-Prot
Match: sp|Q9FHG2|RL322_ARATH (60S ribosomal protein L32-2 OS=Arabidopsis thaliana OX=3702 GN=RPL32B PE=2 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 3.2e-60
Identity = 113/133 (84.96%), Postives = 126/133 (94.74%), Query Frame = 0 

Query: 1   MAVPLLSKKIVKKRTQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60
           MAVPLL+KK+VKKR+ KF RPQSDR+I+VKESWRRPKGIDSRVRRKFKG TLMPN+GYG+
Sbjct: 1   MAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVHNVKELEILMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKF+VHN  ELE+LMMHNRTYCAEIAH++STKKRK IVERA+QLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFIVHNTSELELLMMHNRTYCAEIAHNISTKKRKAIVERASQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           +NKL RLRSQEDE
Sbjct: 121 SNKLGRLRSQEDE 133

[Close]
BLAST of Carg19912 vs. Swiss-Prot
Match: sp|E2RKA8|RL32_CANLF (60S ribosomal protein L32 OS=Canis lupus familiaris OX=9615 GN=RPL32 PE=1 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 3.8e-45
Identity = 89/130 (68.46%), Postives = 113/130 (86.92%), Query Frame = 0 

Query: 4   PLLSKKIVKKRTQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKK 63
           PL+  KIVKKRT+KF R QSDR + +K +WR+P+GID+RVRR+FKG  LMPNIGYG++KK
Sbjct: 6   PLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKK 65

Query: 64  TRHYLPNGFKKFVVHNVKELEILMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVVTNK 123
           T+H LP+GF+KF+VHNVKELE+L+M N++YCAEIAH+VS+K RK IVERAAQL + VTN 
Sbjct: 66  TKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNP 125

Query: 124 LARLRSQEDE 134
            ARLRS+E+E
Sbjct: 126 NARLRSEENE 135

[Close]
BLAST of Carg19912 vs. Swiss-Prot
Match: sp|P62910|RL32_HUMAN (60S ribosomal protein L32 OS=Homo sapiens OX=9606 GN=RPL32 PE=1 SV=2)

HSP 1 Score: 182.2 bits (461), Expect = 3.8e-45
Identity = 89/130 (68.46%), Postives = 113/130 (86.92%), Query Frame = 0 

Query: 4   PLLSKKIVKKRTQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKK 63
           PL+  KIVKKRT+KF R QSDR + +K +WR+P+GID+RVRR+FKG  LMPNIGYG++KK
Sbjct: 6   PLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKK 65

Query: 64  TRHYLPNGFKKFVVHNVKELEILMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVVTNK 123
           T+H LP+GF+KF+VHNVKELE+L+M N++YCAEIAH+VS+K RK IVERAAQL + VTN 
Sbjct: 66  TKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNP 125

Query: 124 LARLRSQEDE 134
            ARLRS+E+E
Sbjct: 126 NARLRSEENE 135

[Close]
BLAST of Carg19912 vs. Swiss-Prot
Match: sp|Q76KA3|RL32_MACFA (60S ribosomal protein L32 OS=Macaca fascicularis OX=9541 GN=RPL32 PE=2 SV=3)

HSP 1 Score: 182.2 bits (461), Expect = 3.8e-45
Identity = 89/130 (68.46%), Postives = 113/130 (86.92%), Query Frame = 0 

Query: 4   PLLSKKIVKKRTQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKK 63
           PL+  KIVKKRT+KF R QSDR + +K +WR+P+GID+RVRR+FKG  LMPNIGYG++KK
Sbjct: 6   PLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKK 65

Query: 64  TRHYLPNGFKKFVVHNVKELEILMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVVTNK 123
           T+H LP+GF+KF+VHNVKELE+L+M N++YCAEIAH+VS+K RK IVERAAQL + VTN 
Sbjct: 66  TKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNP 125

Query: 124 LARLRSQEDE 134
            ARLRS+E+E
Sbjct: 126 NARLRSEENE 135

[Close]
BLAST of Carg19912 vs. TrEMBL
Match: tr|A0A0A0LXN1|A0A0A0LXN1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G462020 PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 8.5e-66
Identity = 130/133 (97.74%), Postives = 132/133 (99.25%), Query Frame = 0 

Query: 1   MAVPLLSKKIVKKRTQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60
           MAVPLLSKKIVKKRTQKFKRPQSDRKISVKE+WRRPKGIDSRVRRKFKGCTLMPNIGYGT
Sbjct: 1   MAVPLLSKKIVKKRTQKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60

Query: 61  DKKTRHYLPNGFKKFVVHNVKELEILMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNV ELE+LMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           TNKLARLRSQEDE
Sbjct: 121 TNKLARLRSQEDE 133

[Close]
BLAST of Carg19912 vs. TrEMBL
Match: tr|A0A1S3B8Z6|A0A1S3B8Z6_CUCME (60S ribosomal protein L32-1 OS=Cucumis melo OX=3656 GN=LOC103487346 PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 2.5e-65
Identity = 129/133 (96.99%), Postives = 132/133 (99.25%), Query Frame = 0 

Query: 1   MAVPLLSKKIVKKRTQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60
           MAVPLLSKKIVKKRT+KFKRPQSDRKISVKE+WRRPKGIDSRVRRKFKGCTLMPNIGYGT
Sbjct: 1   MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60

Query: 61  DKKTRHYLPNGFKKFVVHNVKELEILMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNV ELE+LMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           TNKLARLRSQEDE
Sbjct: 121 TNKLARLRSQEDE 133

[Close]
BLAST of Carg19912 vs. TrEMBL
Match: tr|A0A1R3IJW2|A0A1R3IJW2_9ROSI (Ribosomal protein L32e OS=Corchorus olitorius OX=93759 GN=COLO4_22799 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 1.6e-64
Identity = 127/133 (95.49%), Postives = 132/133 (99.25%), Query Frame = 0 

Query: 1   MAVPLLSKKIVKKRTQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60
           MAVPLLSKKIVKKR +KFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYG+
Sbjct: 1   MAVPLLSKKIVKKRVKKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVHNVKELEILMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNV+ELE+LMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVQELEVLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           TN+LARLRSQEDE
Sbjct: 121 TNRLARLRSQEDE 133

[Close]
BLAST of Carg19912 vs. TrEMBL
Match: tr|A0A1R3JGG7|A0A1R3JGG7_COCAP (Ribosomal protein L32e OS=Corchorus capsularis OX=210143 GN=CCACVL1_06269 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 1.6e-64
Identity = 127/133 (95.49%), Postives = 132/133 (99.25%), Query Frame = 0 

Query: 1   MAVPLLSKKIVKKRTQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60
           MAVPLLSKKIVKKR +KFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYG+
Sbjct: 1   MAVPLLSKKIVKKRVKKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVHNVKELEILMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNV+ELE+LMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVQELEVLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           TN+LARLRSQEDE
Sbjct: 121 TNRLARLRSQEDE 133

[Close]
BLAST of Carg19912 vs. TrEMBL
Match: tr|B9S183|B9S183_RICCO (60S ribosomal protein L32, putative OS=Ricinus communis OX=3988 GN=RCOM_0634780 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 2.1e-64
Identity = 127/133 (95.49%), Postives = 132/133 (99.25%), Query Frame = 0 

Query: 1   MAVPLLSKKIVKKRTQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60
           MAVPLLSKKIVKKR +KFKRPQSDRKISVKE+WRRPKGIDSRVRRKFKGCTLMPNIGYG+
Sbjct: 1   MAVPLLSKKIVKKRVKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVHNVKELEILMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNV+ELE+LMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVQELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           TNKLARLRSQEDE
Sbjct: 121 TNKLARLRSQEDE 133

The following BLAST results are available for this feature:
BLAST of Carg19912 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022927470.18.9e-67100.0060S ribosomal protein L32-1 [Cucurbita moschata] >XP_022927471.1 60S ribosomal p... [more]
XP_023519489.11.2e-6699.2560S ribosomal protein L32-1-like [Cucurbita pepo subsp. pepo] >XP_023519490.1 60... [more]
XP_011657475.11.3e-6597.74PREDICTED: 60S ribosomal protein L32-1 [Cucumis sativus] >KGN65577.1 hypothetica... [more]
XP_022140193.12.2e-6596.9960S ribosomal protein L32-1 [Momordica charantia] >XP_022140194.1 60S ribosomal ... [more]
XP_008443854.13.7e-6596.99PREDICTED: 60S ribosomal protein L32-1 [Cucumis melo][more]
BLAST of Carg19912 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G18100.12.8e-6287.22Ribosomal protein L32e[more]
AT5G46430.11.8e-6184.96Ribosomal protein L32e[more]
BLAST of Carg19912 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P49211|RL321_ARATH5.0e-6187.2260S ribosomal protein L32-1 OS=Arabidopsis thaliana OX=3702 GN=RPL32A PE=2 SV=2[more]
sp|Q9FHG2|RL322_ARATH3.2e-6084.9660S ribosomal protein L32-2 OS=Arabidopsis thaliana OX=3702 GN=RPL32B PE=2 SV=1[more]
sp|E2RKA8|RL32_CANLF3.8e-4568.4660S ribosomal protein L32 OS=Canis lupus familiaris OX=9615 GN=RPL32 PE=1 SV=1[more]
sp|P62910|RL32_HUMAN3.8e-4568.4660S ribosomal protein L32 OS=Homo sapiens OX=9606 GN=RPL32 PE=1 SV=2[more]
sp|Q76KA3|RL32_MACFA3.8e-4568.4660S ribosomal protein L32 OS=Macaca fascicularis OX=9541 GN=RPL32 PE=2 SV=3[more]
BLAST of Carg19912 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LXN1|A0A0A0LXN1_CUCSA8.5e-6697.74Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G462020 PE=4 SV=1[more]
tr|A0A1S3B8Z6|A0A1S3B8Z6_CUCME2.5e-6596.9960S ribosomal protein L32-1 OS=Cucumis melo OX=3656 GN=LOC103487346 PE=4 SV=1[more]
tr|A0A1R3IJW2|A0A1R3IJW2_9ROSI1.6e-6495.49Ribosomal protein L32e OS=Corchorus olitorius OX=93759 GN=COLO4_22799 PE=4 SV=1[more]
tr|A0A1R3JGG7|A0A1R3JGG7_COCAP1.6e-6495.49Ribosomal protein L32e OS=Corchorus capsularis OX=210143 GN=CCACVL1_06269 PE=4 S... [more]
tr|B9S183|B9S183_RICCO2.1e-6495.4960S ribosomal protein L32, putative OS=Ricinus communis OX=3988 GN=RCOM_0634780 ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: INTERPRO
TermDefinition
IPR036351Ribosomal_L32e_sf
IPR001515Ribosomal_L32e
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
cellular_component GO:0005622 intracellular
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg19912-RACarg19912-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001515Ribosomal protein L32eSMARTSM01393Ribosomal_L32e_2coord: 15..122
e-value: 1.4E-72
score: 257.1
IPR001515Ribosomal protein L32ePFAMPF01655Ribosomal_L32ecoord: 15..122
e-value: 4.4E-51
score: 171.7
IPR001515Ribosomal protein L32ePANTHERPTHR2341360S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT Ncoord: 3..133
IPR001515Ribosomal protein L32ePRODOMPD003823coord: 5..123
e-value: 8.0E-58
score: 561.0
IPR001515Ribosomal protein L32eCDDcd00513Ribosomal_L32_L32ecoord: 17..122
e-value: 9.1369E-58
score: 176.181
IPR036351Ribosomal protein L32e superfamilySUPERFAMILYSSF52042Ribosomal protein L32ecoord: 2..131

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg19912Cla019619Watermelon (97103) v1carwmB0797
Carg19912Cla009740Watermelon (97103) v1carwmB0798
Carg19912Csa6G521090Cucumber (Chinese Long) v2carcuB0816
Carg19912Csa1G462020Cucumber (Chinese Long) v2carcuB0815
Carg19912MELO3C007167Melon (DHL92) v3.5.1carmeB0797
Carg19912MELO3C002703Melon (DHL92) v3.5.1carmeB0796
Carg19912ClCG03G007200Watermelon (Charleston Gray)carwcgB0773
Carg19912ClCG01G024240Watermelon (Charleston Gray)carwcgB0772
Carg19912CSPI01G21590Wild cucumber (PI 183967)carcpiB0835
Carg19912CSPI06G35930Wild cucumber (PI 183967)carcpiB0836
Carg19912Cucsa.047410Cucumber (Gy14) v1carcgyB0911
Carg19912Cucsa.212580Cucumber (Gy14) v1carcgyB0913
Carg19912CmaCh03G013660Cucurbita maxima (Rimu)carcmaB1111
Carg19912CmaCh13G005680Cucurbita maxima (Rimu)carcmaB1109
Carg19912CmaCh07G001430Cucurbita maxima (Rimu)carcmaB1112
Carg19912CmoCh13G005970Cucurbita moschata (Rifu)carcmoB1080
Carg19912CmoCh03G013620Cucurbita moschata (Rifu)carcmoB1082
Carg19912CmoCh18G004260Cucurbita moschata (Rifu)carcmoB1081
Carg19912CmoCh07G001400Cucurbita moschata (Rifu)carcmoB1083
Carg19912Lsi01G001840Bottle gourd (USVL1VR-Ls)carlsiB734
Carg19912Lsi02G008550Bottle gourd (USVL1VR-Ls)carlsiB735
Carg19912Cp4.1LG09g07730Cucurbita pepo (Zucchini)carcpeB1119
Carg19912Cp4.1LG19g06210Cucurbita pepo (Zucchini)carcpeB1122
Carg19912Cp4.1LG20g04890Cucurbita pepo (Zucchini)carcpeB1123
Carg19912Cp4.1LG10g05880Cucurbita pepo (Zucchini)carcpeB1120
Carg19912CsGy1G021250Cucumber (Gy14) v2carcgybB0789
Carg19912CsGy6G035350Cucumber (Gy14) v2carcgybB0790
Carg19912MELO3C007167.2Melon (DHL92) v3.6.1carmedB0809
Carg19912MELO3C002703.2Melon (DHL92) v3.6.1carmedB0808
Carg19912CsaV3_6G051400Cucumber (Chinese Long) v3carcucB0840
Carg19912CsaV3_1G032790Cucumber (Chinese Long) v3carcucB0839
Carg19912Cla97C01G024200Watermelon (97103) v2carwmbB0836
Carg19912Cla97C03G058440Watermelon (97103) v2carwmbB0837
Carg19912Bhi03G000035Wax gourdcarwgoB0934
Carg19912Bhi08G001739Wax gourdcarwgoB0936
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg19912Carg14552Silver-seed gourdcarcarB177
Carg19912Carg15383Silver-seed gourdcarcarB508
Carg19912Carg23086Silver-seed gourdcarcarB623
The following block(s) are covering this gene:
GeneOrganismBlock
Carg19912Cucurbita maxima (Rimu)carcmaB1110