Cucsa.205640 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.205640
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionNucleolar 16
Locationscaffold01416 : 656654 .. 658254 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CACCAATTCCCTTCTCTCCTTCTGATTCACAGAGATGGGAAGGTCTCGAAGAAAGTACAAGAAATCTCGCCCAAAAGTTAAGGTTGGTTTGCCCAAAAGGAACCCTAATGTCTTCAAGCCATCTTTTTGCATGCCGCCTAAGCTTCGCTCCTTGCTCGCCGAACAATTTGAAGAAGATCCAACATGGGATGAGAAAGGAAGTGTCATTCAAAATTATAAGTCCTTTGGTGTTATTTCTAATCCTAATTTGCTCAGTGTTCGTTCCCGCACTGATCACATCGTTGAGAGCGACTCTCTCCAAGTCCCGCCATCCGATGACCCTGACACCGTTCTTGATTCTTCCGGTAGTGATGTTGAAGAGGACGGTGAGTATGAGTTCGAATCTGTTTATCTTTCGGTATTGTTTTAAATTTCAGCCGTGTCTCCGTGAATATATCTGGGTTTTTTGGAATTTTTGGATTTGAAAGAAACGGGATGGTTTTGAGGGTAGATAATGTGATGTTTTCAAATTTATAAGTATATTTGTTGGGATGAAATTAGTTGGCTTTTAGACATATGATGCCTTCTGTTCCAGTTTTAGTGAATTAGTCACTGGGAATAGTTTCTGCAATCTGTTAATACTTTGGTGTTCTTCACCTGAAAGGAGTCAAAGCTTAGCAATGATTTGAAATTTCTAAATAGCTTTAACTTTAAGAGAACTGGCAACTTTCTATCGAACCAAAATTGCATCCAAACTGGTTGCATTTAGTCGGCCATTGATATATTTGGGGAACCTTTTGCTGGATCAGGTTATATGAAATGAAACTAAAGGTCAAGCTGATGGGTTGCGGTAATTTGATCATATCAATGCTCCATCACTCTCCCTTCACTCGTGATTTGAAAATTTGTCGAAGTAGATCAAACGAAAATCAATATTACTTGTTGAGAAAATGACATTACTGTTGTAACTCAGAAGTTTAAGCTCGTGGGTTATTGTAATTTTAGTTATTCCAATACTTCAACAAAATAAAATGATGGTTGAGATCATTGTAATGTCTTAATTGTCATGATTATGAAGGTTCATGAGGATGTCAAAGCAATTTTTTAGTTGTGTTTCTGATTTGATCTTGTTCTTTCTTTTGTCTTCTTTAGATTTGAAAACAGCATTGGGAAAGAAGCGCAAAGATGGGAAATCTGCACCTCTGCAACCGTTGACCACACTTCAGCGTGTTCATGTCGGTAAGCTAATCGAGAAATATGGAGATGATTACCAGGTAAGCTTCAATGTTGCTTGCTTTTAAATCTGAGTAATAGGCATTGTTTTTTTTTTTTTTTAAATTTTCCTCATTGAAAATTGCTCTGCAGAGGATGTTTATGGATACAAAGCTGAACTCAATGCAGCATTCTGTTGCAACTCTGGAGAAACTATGCAAAAGATATAACAGTTGTTTAGATTCGAATCCATTGATATTGACTCGTAAACGACGATAGCTCCTTGTCTCTCAAATTGTTTAGTTACGAGAGGTGAAAATCAGAGACGGTATGATCATGAAATTTTCTTGAGCAATATTGTTTTGAAACTAAATGTTATGAGCCTTAATAGATAAATCTTTCTTCCTGCT

mRNA sequence

CACCAATTCCCTTCTCTCCTTCTGATTCACAGAGATGGGAAGGTCTCGAAGAAAGTACAAGAAATCTCGCCCAAAAGTTAAGGTTGGTTTGCCCAAAAGGAACCCTAATGTCTTCAAGCCATCTTTTTGCATGCCGCCTAAGCTTCGCTCCTTGCTCGCCGAACAATTTGAAGAAGATCCAACATGGGATGAGAAAGGAAGTGTCATTCAAAATTATAAGTCCTTTGGTGTTATTTCTAATCCTAATTTGCTCAGTGTTCGTTCCCGCACTGATCACATCGTTGAGAGCGACTCTCTCCAAGTCCCGCCATCCGATGACCCTGACACCGTTCTTGATTCTTCCGGTAGTGATGTTGAAGAGGACGATTTGAAAACAGCATTGGGAAAGAAGCGCAAAGATGGGAAATCTGCACCTCTGCAACCGTTGACCACACTTCAGCGTGTTCATGTCGGTAAGCTAATCGAGAAATATGGAGATGATTACCAGAGGATGTTTATGGATACAAAGCTGAACTCAATGCAGCATTCTGTTGCAACTCTGGAGAAACTATGCAAAAGATATAACAGTTGTTTAGATTCGAATCCATTGATATTGACTCGTAAACGACGATAGCTCCTTGTCTCTCAAATTGTTTAGTTACGAGAGGTGAAAATCAGAGACGGTATGATCATGAAATTTTCTTGAGCAATATTGTTTTGAAACTAAATGTTATGAGCCTTAATAGATAAATCTTTCTTCCTGCT

Coding sequence (CDS)

ATGGGAAGGTCTCGAAGAAAGTACAAGAAATCTCGCCCAAAAGTTAAGGTTGGTTTGCCCAAAAGGAACCCTAATGTCTTCAAGCCATCTTTTTGCATGCCGCCTAAGCTTCGCTCCTTGCTCGCCGAACAATTTGAAGAAGATCCAACATGGGATGAGAAAGGAAGTGTCATTCAAAATTATAAGTCCTTTGGTGTTATTTCTAATCCTAATTTGCTCAGTGTTCGTTCCCGCACTGATCACATCGTTGAGAGCGACTCTCTCCAAGTCCCGCCATCCGATGACCCTGACACCGTTCTTGATTCTTCCGGTAGTGATGTTGAAGAGGACGATTTGAAAACAGCATTGGGAAAGAAGCGCAAAGATGGGAAATCTGCACCTCTGCAACCGTTGACCACACTTCAGCGTGTTCATGTCGGTAAGCTAATCGAGAAATATGGAGATGATTACCAGAGGATGTTTATGGATACAAAGCTGAACTCAATGCAGCATTCTGTTGCAACTCTGGAGAAACTATGCAAAAGATATAACAGTTGTTTAGATTCGAATCCATTGATATTGACTCGTAAACGACGATAG

Protein sequence

MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKGSVIQNYKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSDDPDTVLDSSGSDVEEDDLKTALGKKRKDGKSAPLQPLTTLQRVHVGKLIEKYGDDYQRMFMDTKLNSMQHSVATLEKLCKRYNSCLDSNPLILTRKRR*
Homology
[Close]
BLAST of Cucsa.205640 vs. TrEMBL
Match: A0A0A0KAV9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G396460 PE=4 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 1.5e-105
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 1 

Query: 1   MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKGSVIQN 60
           MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKGSVIQN
Sbjct: 1   MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKGSVIQN 60

Query: 61  YKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSDDPDTVLDSSGSDVEEDDLKTALGKKR 120
           YKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSDDPDTVLDSSGSDVEEDDLKTALGKKR
Sbjct: 61  YKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSDDPDTVLDSSGSDVEEDDLKTALGKKR 120

Query: 121 KDGKSAPLQPLTTLQRVHVGKLIEKYGDDYQRMFMDTKLNSMQHSVATLEKLCKRYNSCL 180
           KDGKSAPLQPLTTLQRVHVGKLIEKYGDDYQRMFMDTKLNSMQHSVATLEKLCKRYNSCL
Sbjct: 121 KDGKSAPLQPLTTLQRVHVGKLIEKYGDDYQRMFMDTKLNSMQHSVATLEKLCKRYNSCL 180

Query: 181 DSNPLILTRKRR 193
           DSNPLILTRKRR
Sbjct: 181 DSNPLILTRKRR 192

[Close]
BLAST of Cucsa.205640 vs. TrEMBL
Match: B9SAP7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1177900 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 5.3e-71
Identity = 137/193 (70.98%), Postives = 160/193 (82.90%), Query Frame = 1 

Query: 1   MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKGSVIQN 60
           MGRSRRKY++SR KV VGLPKRNPNVFK +F  PPKLRSL+     +   WD+K SVIQN
Sbjct: 1   MGRSRRKYRESRAKVSVGLPKRNPNVFKAAFNFPPKLRSLVDADRSK---WDDKASVIQN 60

Query: 61  YKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSDDPDTVLDS-----SGSDVEEDDLKTA 120
           YKSFGV+SNPNLL VRSRT HIV+++SLQVPPS  P+  +D      SGSD+EEDDLK+A
Sbjct: 61  YKSFGVVSNPNLLGVRSRTSHIVQTESLQVPPSPPPEGPIDEFEPTDSGSDLEEDDLKSA 120

Query: 121 LGKKRKDGKSAPLQPLTTLQRVHVGKLIEKYGDDYQRMFMDTKLNSMQHSVATLEKLCKR 180
           LGKKR+DGKSAPLQPLTT+QR+H+G+LIEKYGD+YQ MFMD+KLN MQHS+ATLEK CKR
Sbjct: 121 LGKKRRDGKSAPLQPLTTMQRIHIGRLIEKYGDNYQAMFMDSKLNVMQHSIATLEKFCKR 180

Query: 181 YNSCLDSNPLILT 189
           Y S  D NPLIL+
Sbjct: 181 YLSYRDKNPLILS 190

[Close]
BLAST of Cucsa.205640 vs. TrEMBL
Match: A0A067HGU8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029757mg PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 1.2e-70
Identity = 136/191 (71.20%), Postives = 162/191 (84.82%), Query Frame = 1 

Query: 1   MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKGSVIQN 60
           MGRSRRKYK+SR KV+VGLPK+NP++FKP+F +PPKLRSL+    +E P WD K SVIQN
Sbjct: 1   MGRSRRKYKRSRTKVRVGLPKKNPHLFKPAFSLPPKLRSLV----DELPQWDGKASVIQN 60

Query: 61  YKSFGVISNPNLLSVRSRTDHIVESDSLQVP-PSDDPDTVLD--SSGSDVEEDDLKTALG 120
           YKSFG++SNPNLL VRSRT HIVES+SLQV  PSD+P    +   SGSD+EEDD+K+ALG
Sbjct: 61  YKSFGLVSNPNLLGVRSRTSHIVESESLQVTQPSDEPANEFEPIDSGSDLEEDDVKSALG 120

Query: 121 KKRKDGKSAPLQPLTTLQRVHVGKLIEKYGDDYQRMFMDTKLNSMQHSVATLEKLCKRYN 180
           KKRKDGK+A LQPLTT+QRV++G+L+E YGDDYQ MF DTKLN+MQHSVATLEKLCKRY+
Sbjct: 121 KKRKDGKTASLQPLTTIQRVYIGRLVETYGDDYQAMFRDTKLNAMQHSVATLEKLCKRYD 180

Query: 181 SCLDSNPLILT 189
            C D NPLI +
Sbjct: 181 ICKDKNPLIFS 187

[Close]
BLAST of Cucsa.205640 vs. TrEMBL
Match: V4TVI0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022428mg PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 1.2e-70
Identity = 136/191 (71.20%), Postives = 162/191 (84.82%), Query Frame = 1 

Query: 1   MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKGSVIQN 60
           MGRSRRKYK+SR KV+VGLPK+NP++FKP+F +PPKLRSL+    +E P WD K SVIQN
Sbjct: 1   MGRSRRKYKRSRTKVRVGLPKKNPHLFKPAFSLPPKLRSLV----DELPQWDGKASVIQN 60

Query: 61  YKSFGVISNPNLLSVRSRTDHIVESDSLQVP-PSDDPDTVLD--SSGSDVEEDDLKTALG 120
           YKSFG++SNPNLL VRSRT HIVES+SLQV  PSD+P    +   SGSD+EEDD+K+ALG
Sbjct: 61  YKSFGLVSNPNLLGVRSRTSHIVESESLQVTQPSDEPANEFEPIDSGSDLEEDDVKSALG 120

Query: 121 KKRKDGKSAPLQPLTTLQRVHVGKLIEKYGDDYQRMFMDTKLNSMQHSVATLEKLCKRYN 180
           KKRKDGK+A LQPLTT+QRV++G+L+E YGDDYQ MF DTKLN+MQHSVATLEKLCKRY+
Sbjct: 121 KKRKDGKTASLQPLTTIQRVYIGRLVETYGDDYQAMFRDTKLNAMQHSVATLEKLCKRYD 180

Query: 181 SCLDSNPLILT 189
            C D NPLI +
Sbjct: 181 ICKDKNPLIFS 187

[Close]
BLAST of Cucsa.205640 vs. TrEMBL
Match: M5W6W3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012023mg PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 1.5e-70
Identity = 132/187 (70.59%), Postives = 157/187 (83.96%), Query Frame = 1 

Query: 1   MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKGSVIQN 60
           MGRSRRKYK+SR KV+V LPKR PNVFK +FC+PPKLR+LL +Q     +WD +G+VI+N
Sbjct: 1   MGRSRRKYKQSRTKVRVALPKRKPNVFKAAFCLPPKLRALLEQQGPSSASWDAEGTVIEN 60

Query: 61  YKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSDDPDTVLDSSGSDVEEDDLKTALGKKR 120
           YKSFG +SNPNLL VRSRT H++ESDSLQVPP   P       GSDVEEDDL+++LGKKR
Sbjct: 61  YKSFGFVSNPNLLGVRSRTSHMIESDSLQVPPPP-PSGDEPVDGSDVEEDDLRSSLGKKR 120

Query: 121 KDGKSAPLQPLTTLQRVHVGKLIEKYGDDYQRMFMDTKLNSMQHSVATLEKLCKRYNSCL 180
           +DGKSAPLQPLT +QRV++G+LIEKYGDDYQ MFMDTKLN+MQHSVATLEKLCKRY+   
Sbjct: 121 RDGKSAPLQPLTAMQRVYIGRLIEKYGDDYQGMFMDTKLNAMQHSVATLEKLCKRYHVHK 180

Query: 181 DSNPLIL 188
           D NPL++
Sbjct: 181 DKNPLLI 186

[Close]
BLAST of Cucsa.205640 vs. TAIR10
Match: AT1G02870.1 (AT1G02870.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 250.0 bits (637), Expect = 1.2e-66
Identity = 122/197 (61.93%), Postives = 153/197 (77.66%), Query Frame = 1 

Query: 1   MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKGSVIQN 60
           M RSRRKY+ SR KV+V LPK+NPN+FKP+F  PPKLR+L+ +     P WD++ SVIQN
Sbjct: 1   MARSRRKYRNSRAKVRVALPKKNPNIFKPAFNFPPKLRALMGDDV---PEWDDQASVIQN 60

Query: 61  YKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSDDPDT---------VLDSSGSDVEEDD 120
           YKSFGVISNPNLL +R+RTDH+++ DSL VPP  +P T          +DS GS++EEDD
Sbjct: 61  YKSFGVISNPNLLGIRARTDHMIQDDSLNVPPPVEPPTDDPIAKEFEPIDS-GSELEEDD 120

Query: 121 LKTALGKKRKDGKSAPLQPLTTLQRVHVGKLIEKYGDDYQRMFMDTKLNSMQHSVATLEK 180
           LKTALGK+RKDGKSAPLQPLTT+QR H+ +L+EK+GDD + M+ D KLNSMQHSVATL K
Sbjct: 121 LKTALGKQRKDGKSAPLQPLTTMQRTHIRRLVEKHGDDIEGMYRDRKLNSMQHSVATLRK 180

Query: 181 LCKRYNSCLDSNPLILT 189
           LC RY    D NP++++
Sbjct: 181 LCTRYQIYKDKNPILVS 193

[Close]
BLAST of Cucsa.205640 vs. NCBI nr
Match: gi|449436503|ref|XP_004136032.1| (PREDICTED: uncharacterized protein LOC101209910 [Cucumis sativus])

HSP 1 Score: 390.2 bits (1001), Expect = 2.1e-105
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 1 

Query: 1   MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKGSVIQN 60
           MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKGSVIQN
Sbjct: 1   MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKGSVIQN 60

Query: 61  YKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSDDPDTVLDSSGSDVEEDDLKTALGKKR 120
           YKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSDDPDTVLDSSGSDVEEDDLKTALGKKR
Sbjct: 61  YKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSDDPDTVLDSSGSDVEEDDLKTALGKKR 120

Query: 121 KDGKSAPLQPLTTLQRVHVGKLIEKYGDDYQRMFMDTKLNSMQHSVATLEKLCKRYNSCL 180
           KDGKSAPLQPLTTLQRVHVGKLIEKYGDDYQRMFMDTKLNSMQHSVATLEKLCKRYNSCL
Sbjct: 121 KDGKSAPLQPLTTLQRVHVGKLIEKYGDDYQRMFMDTKLNSMQHSVATLEKLCKRYNSCL 180

Query: 181 DSNPLILTRKRR 193
           DSNPLILTRKRR
Sbjct: 181 DSNPLILTRKRR 192

[Close]
BLAST of Cucsa.205640 vs. NCBI nr
Match: gi|659101400|ref|XP_008451586.1| (PREDICTED: uncharacterized protein LOC103492822 [Cucumis melo])

HSP 1 Score: 381.3 bits (978), Expect = 9.8e-103
Identity = 187/190 (98.42%), Postives = 189/190 (99.47%), Query Frame = 1 

Query: 1   MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKGSVIQN 60
           MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKGSVIQN
Sbjct: 1   MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKGSVIQN 60

Query: 61  YKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSDDPDTVLDSSGSDVEEDDLKTALGKKR 120
           YKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSDDPD+VLDSSGSDVEEDDLKTALGKKR
Sbjct: 61  YKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSDDPDSVLDSSGSDVEEDDLKTALGKKR 120

Query: 121 KDGKSAPLQPLTTLQRVHVGKLIEKYGDDYQRMFMDTKLNSMQHSVATLEKLCKRYNSCL 180
           KDGKSAPLQPLTTLQRVHVGKLIEKYGDDYQRMFMDTKLNSMQHSVATLEKLCKRY+SCL
Sbjct: 121 KDGKSAPLQPLTTLQRVHVGKLIEKYGDDYQRMFMDTKLNSMQHSVATLEKLCKRYHSCL 180

Query: 181 DSNPLILTRK 191
           D NPLILTRK
Sbjct: 181 DKNPLILTRK 190

[Close]
BLAST of Cucsa.205640 vs. NCBI nr
Match: gi|694429134|ref|XP_009342100.1| (PREDICTED: nucleolar protein 16-like [Pyrus x bretschneideri])

HSP 1 Score: 292.4 bits (747), Expect = 6.0e-76
Identity = 144/195 (73.85%), Postives = 166/195 (85.13%), Query Frame = 1 

Query: 1   MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEED-PTWDEKGSVIQ 60
           MGRSRRKYK+SR KV+VGLPK+ PNVFKP+FC+PPKLR+LL +Q     P WD +GSVIQ
Sbjct: 1   MGRSRRKYKQSRTKVRVGLPKKKPNVFKPAFCLPPKLRALLEQQDPASAPQWDAEGSVIQ 60

Query: 61  NYKSFGVISNPNLLSVRSRTDHIVESDSLQVPP--SDDPDTVLD---SSGSDVEEDDLKT 120
           NYKSFG +SNPNLLS+R+R  H+VESDSLQVPP  SDDPD   +     GSD+EEDDLKT
Sbjct: 61  NYKSFGFVSNPNLLSLRARNSHVVESDSLQVPPPPSDDPDPAAELDFGDGSDLEEDDLKT 120

Query: 121 ALGKKRKDGKSAPLQPLTTLQRVHVGKLIEKYGDDYQRMFMDTKLNSMQHSVATLEKLCK 180
           +LGKKR+DGKSAPLQPLT +QR+H+G+LIEKYG+DYQRMFMDTKLN+MQHSVATLEKLCK
Sbjct: 121 SLGKKRRDGKSAPLQPLTAMQRLHIGRLIEKYGEDYQRMFMDTKLNAMQHSVATLEKLCK 180

Query: 181 RYNSCLDSNPLILTR 190
           RY    D NPLILTR
Sbjct: 181 RYRVHKDRNPLILTR 195

[Close]
BLAST of Cucsa.205640 vs. NCBI nr
Match: gi|694439440|ref|XP_009346606.1| (PREDICTED: uncharacterized protein LOC103938330 [Pyrus x bretschneideri])

HSP 1 Score: 291.6 bits (745), Expect = 1.0e-75
Identity = 145/195 (74.36%), Postives = 167/195 (85.64%), Query Frame = 1 

Query: 1   MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEED-PTWDEKGSVIQ 60
           MGRSRRKYK+SR KV+VGLPKR PNVFKP+FC+PPKLR+LL +Q     P WD +GSVIQ
Sbjct: 1   MGRSRRKYKQSRTKVRVGLPKRKPNVFKPAFCLPPKLRALLEQQGPASAPRWDAEGSVIQ 60

Query: 61  NYKSFGVISNPNLLSVRSRTDHIVESDSLQVPP--SDDPDTVLD---SSGSDVEEDDLKT 120
           NYKSFG +SNPNLLS+RSR  H+VESDSLQVPP  SDDPD   +   + GSD+EEDDLKT
Sbjct: 61  NYKSFGFVSNPNLLSLRSRNSHMVESDSLQVPPPPSDDPDASAELDFADGSDLEEDDLKT 120

Query: 121 ALGKKRKDGKSAPLQPLTTLQRVHVGKLIEKYGDDYQRMFMDTKLNSMQHSVATLEKLCK 180
           +LGKKR+DGKSAPLQPLT +QR+H+G+LIE+YGDDYQRMFMDTKLN+MQHSVATLEKLC 
Sbjct: 121 SLGKKRRDGKSAPLQPLTAMQRLHLGRLIEEYGDDYQRMFMDTKLNAMQHSVATLEKLCS 180

Query: 181 RYNSCLDSNPLILTR 190
           RY+   D NPLILTR
Sbjct: 181 RYHVHKDRNPLILTR 195

[Close]
BLAST of Cucsa.205640 vs. NCBI nr
Match: gi|694429249|ref|XP_009342154.1| (PREDICTED: nucleolar protein 16-like [Pyrus x bretschneideri])

HSP 1 Score: 291.6 bits (745), Expect = 1.0e-75
Identity = 143/195 (73.33%), Postives = 166/195 (85.13%), Query Frame = 1 

Query: 1   MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEED-PTWDEKGSVIQ 60
           MGRSRRKYK+SR KV+VGLPK+ PNVFKP+FC+PPKLR+LL +Q     P WD +GSVIQ
Sbjct: 1   MGRSRRKYKQSRTKVRVGLPKKKPNVFKPAFCLPPKLRALLEQQDPASAPQWDAEGSVIQ 60

Query: 61  NYKSFGVISNPNLLSVRSRTDHIVESDSLQVPP--SDDPDTVLD---SSGSDVEEDDLKT 120
           NYKSFG +SNPNLLS+R+R  H+VESDSLQVPP  SDDPD   +     GSD+EEDDLKT
Sbjct: 61  NYKSFGFVSNPNLLSLRARNSHVVESDSLQVPPPPSDDPDAAAELDFGDGSDLEEDDLKT 120

Query: 121 ALGKKRKDGKSAPLQPLTTLQRVHVGKLIEKYGDDYQRMFMDTKLNSMQHSVATLEKLCK 180
           +LGKKR+DGKSAPLQPLT +QR+H+G+LIEKYG+DYQRMFMDTKLN+MQHSVATLEKLCK
Sbjct: 121 SLGKKRRDGKSAPLQPLTAMQRLHIGRLIEKYGEDYQRMFMDTKLNAMQHSVATLEKLCK 180

Query: 181 RYNSCLDSNPLILTR 190
           RY+   D NP ILTR
Sbjct: 181 RYHVHKDRNPFILTR 195

The following BLAST results are available for this feature:
BLAST of Cucsa.205640 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KAV9_CUCSA1.5e-105100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G396460 PE=4 SV=1[more]
B9SAP7_RICCO5.3e-7170.98Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1177900 PE=4 SV=1[more]
A0A067HGU8_CITSI1.2e-7071.20Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029757mg PE=4 SV=1[more]
V4TVI0_9ROSI1.2e-7071.20Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022428mg PE=4 SV=1[more]
M5W6W3_PRUPE1.5e-7070.59Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012023mg PE=4 SV=1[more]
BLAST of Cucsa.205640 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G02870.11.2e-6661.93 FUNCTIONS IN: molecular_function unknown[more]
BLAST of Cucsa.205640 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449436503|ref|XP_004136032.1|2.1e-105100.00PREDICTED: uncharacterized protein LOC101209910 [Cucumis sativus][more]
gi|659101400|ref|XP_008451586.1|9.8e-10398.42PREDICTED: uncharacterized protein LOC103492822 [Cucumis melo][more]
gi|694429134|ref|XP_009342100.1|6.0e-7673.85PREDICTED: nucleolar protein 16-like [Pyrus x bretschneideri][more]
gi|694439440|ref|XP_009346606.1|1.0e-7574.36PREDICTED: uncharacterized protein LOC103938330 [Pyrus x bretschneideri][more]
gi|694429249|ref|XP_009342154.1|1.0e-7573.33PREDICTED: nucleolar protein 16-like [Pyrus x bretschneideri][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR019002Ribosome_biogenesis_Nop16
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.205640.1Cucsa.205640.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019002Ribosome biogenesis protein Nop16PFAMPF09420Nop16coord: 98..176
score: 8.0E-17coord: 3..72
score: 4.
NoneNo IPR availablePANTHERPTHR13243HSPC111 PROTEIN-RELATEDcoord: 2..176
score: 2.4
NoneNo IPR availablePANTHERPTHR13243:SF1NUCLEOLAR PROTEIN 16coord: 2..176
score: 2.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.205640Cla015061Watermelon (97103) v1cgywmB402
Cucsa.205640Csa7G396460Cucumber (Chinese Long) v2cgycuB312
Cucsa.205640MELO3C016009Melon (DHL92) v3.5.1cgymeB371
Cucsa.205640ClCG09G005940Watermelon (Charleston Gray)cgywcgB379
Cucsa.205640CSPI07G17400Wild cucumber (PI 183967)cgycpiB325
Cucsa.205640CmaCh17G010950Cucurbita maxima (Rimu)cgycmaB0606
Cucsa.205640CmaCh08G004180Cucurbita maxima (Rimu)cgycmaB0608
Cucsa.205640CmoCh17G010690Cucurbita moschata (Rifu)cgycmoB0608
Cucsa.205640CmoCh08G004120Cucurbita moschata (Rifu)cgycmoB0610
Cucsa.205640Lsi02G023950Bottle gourd (USVL1VR-Ls)cgylsiB351
Cucsa.205640Cp4.1LG12g05700Cucurbita pepo (Zucchini)cgycpeB0579
Cucsa.205640Cp4.1LG17g06980Cucurbita pepo (Zucchini)cgycpeB0580
Cucsa.205640MELO3C016009.2Melon (DHL92) v3.6.1cgymedB368
Cucsa.205640CsaV3_7G029180Cucumber (Chinese Long) v3cgycucB330
Cucsa.205640Cla97C09G168490Watermelon (97103) v2cgywmbB383
Cucsa.205640Bhi09G000709Wax gourdcgywgoB432
Cucsa.205640Carg07177Silver-seed gourdcarcgyB0132
Cucsa.205640Carg12105Silver-seed gourdcarcgyB0640
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.205640Silver-seed gourdcarcgyB0932
Cucsa.205640Cucumber (Chinese Long) v3cgycucB329
Cucsa.205640Watermelon (97103) v2cgywmbB382
Cucsa.205640Wax gourdcgywgoB429
Cucsa.205640Wax gourdcgywgoB430
Cucsa.205640Cucumber (Gy14) v1cgycgyB035
Cucsa.205640Cucurbita maxima (Rimu)cgycmaB0605
Cucsa.205640Cucurbita moschata (Rifu)cgycmoB0607
Cucsa.205640Wild cucumber (PI 183967)cgycpiB324
Cucsa.205640Cucumber (Chinese Long) v2cgycuB311
Cucsa.205640Melon (DHL92) v3.5.1cgymeB372
Cucsa.205640Watermelon (Charleston Gray)cgywcgB381
Cucsa.205640Watermelon (97103) v1cgywmB405
Cucsa.205640Watermelon (97103) v1cgywmB404
Cucsa.205640Bottle gourd (USVL1VR-Ls)cgylsiB352
Cucsa.205640Melon (DHL92) v3.6.1cgymedB369