CSPI07G17400 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI07G17400
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionNucleolar 16
LocationChr7 : 15797561 .. 15799277 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTACGAAATCCCAAATGAGTGCTTCATCTTCCTCATACTAAAACCCTAGCCACCAATTCCCTTCTCTCCTTCTGATTCACAGAGATGGGAAGGTCTCGAAGAAAGTACAAGAAATCTCGCCCAAAAGTTAAGGTTGGTTTGCCCAAAAGGAACCCTAATGTCTTCAAGCCATCTTTTTGCATGCCGCCTAAGCTTCGCTCCTTGCTCGCCGAACAATTTGAAGAAGATCCAACATGGGACGAGAAAGGAAGTGTCATTCAAAATTATAAGTCCTTTGGTGTTATTTCTAATCCTAATTTGCTCAGTGTTCGTTCCCGCACTGATCACATCGTTGAGAGCGACTCTCTCCAAGTCCCGCCATCCGATGACCCTGACACCGTTCTTGATTCTTCCGGTAGCGATGTTGAAGAGGACGGTGAGTATGAGTTCGAATCTGTTTATCTTTCGGTATTGTTTTAAATTTCAGCCGTGTCTCCGTGAATATATCTGGGTTTTTTGGAATTTTTGGATTTGAAAGGAACGGGATGGTTTTGAGGGTAGATAATGTGATGTATTCAAATTTATAAGTATATTTGTTGGGATGAAATTAGTTGGCTTTTAGACATATGATGCCTTCTGTTCCAGTTTTAGTGAATTAGTCACTGGGAATAGTTTCTGCAATCTGTTAATACTTTGGTGTTCTTCACCTGAAAGGAGTCAAAGCTTAGCAATGATTTGAAATTTCTAAATAGCTTTAACTTTAAGAGAACTGGCAACTTTCTATCGAACCAAAATTGCATCCAAACTGGTTGCATTTAGTCGGCCATTGATATATTTGGGGAACCTTTTGCTGGATCAGGTTATATGAAATGAAACTAAAGGTCAAGCTGATGGGTTGCGGTAATTTGATCATATCAATGCTCCATCACTCTCCCTTCACTCGTGATTTGAAAATTTGTCGAAGTAGATCAAACGAAAATCAATATTACTTGTTGAGAAAATGACATTACTGTTGTAACTCAGAAGTTTAAGCTCGTGGGTTATTGTAATTTTAGTTATTCCAATACTTCAACAAAATAAAATGATGGTTGAGATCATTGTAATGTCTTAATTGTCATGATTATGAAGGTTCATGAGGATGTCAAAGCAATTTTTTAGTTGTGTTTCTGATTTGATCTTGTTCTTTCTTTTGTCTTCTTTAGATTTGAAAACAGCATTGGGAAAGAAGCGCAAAGATGGGAAATCTGCACCTCTGCAACCGTTGACCACACTTCAGCGTGTTCATGTCGGTAAGCTAATCGAGAAATATGGAGATGATTACCAGGTAAGCTTCAATGTTGCTTGCTTTTAAATCTGAGTAATAGGCATTGTTTTTTTTTTTTTTTTTTTTATAATTTTCCTCATTGAAAATTGCTCTGCAGAGGATGTTTATGGATACAAAGCTGAACTCAATGCAGCATTCTGTTGCAACTCTGGAGAAACTATGCAAAAGATATAACAGTTGTTTAGATTCGAATCCATTGATATTGACTCGTAAACGACGATAGCTCCTTGTCTCTCAAATTGTTTAGTTACAAGAGGTGAAAATCAGAGACGGTATGATCATGAAATTTTCTTGAGCAATATTGTTTTGAAACTAAATGTTATGAGCCTTAATAGATAAATCTTTCTTCCTGCTTCCTGTAGTTTTATTCCTTTCAAGAAACTGCTTATAATTTTGATTCATGGTTAGTTGGTC

mRNA sequence

ATGGGAAGGTCTCGAAGAAAGTACAAGAAATCTCGCCCAAAAGTTAAGGTTGGTTTGCCCAAAAGGAACCCTAATGTCTTCAAGCCATCTTTTTGCATGCCGCCTAAGCTTCGCTCCTTGCTCGCCGAACAATTTGAAGAAGATCCAACATGGGACGAGAAAGGAAGTGTCATTCAAAATTATAAGTCCTTTGGTGTTATTTCTAATCCTAATTTGCTCAGTGTTCGTTCCCGCACTGATCACATCGTTGAGAGCGACTCTCTCCAAGTCCCGCCATCCGATGACCCTGACACCGTTCTTGATTCTTCCGGTAGCGATGTTGAAGAGGACGATTTGAAAACAGCATTGGGAAAGAAGCGCAAAGATGGGAAATCTGCACCTCTGCAACCGTTGACCACACTTCAGCGTGTTCATGTCGGTAAGCTAATCGAGAAATATGGAGATGATTACCAGAGGATGTTTATGGATACAAAGCTGAACTCAATGCAGCATTCTGTTGCAACTCTGGAGAAACTATGCAAAAGATATAACAGTTGTTTAGATTCGAATCCATTGATATTGACTCGTAAACGACGATAG

Coding sequence (CDS)

ATGGGAAGGTCTCGAAGAAAGTACAAGAAATCTCGCCCAAAAGTTAAGGTTGGTTTGCCCAAAAGGAACCCTAATGTCTTCAAGCCATCTTTTTGCATGCCGCCTAAGCTTCGCTCCTTGCTCGCCGAACAATTTGAAGAAGATCCAACATGGGACGAGAAAGGAAGTGTCATTCAAAATTATAAGTCCTTTGGTGTTATTTCTAATCCTAATTTGCTCAGTGTTCGTTCCCGCACTGATCACATCGTTGAGAGCGACTCTCTCCAAGTCCCGCCATCCGATGACCCTGACACCGTTCTTGATTCTTCCGGTAGCGATGTTGAAGAGGACGATTTGAAAACAGCATTGGGAAAGAAGCGCAAAGATGGGAAATCTGCACCTCTGCAACCGTTGACCACACTTCAGCGTGTTCATGTCGGTAAGCTAATCGAGAAATATGGAGATGATTACCAGAGGATGTTTATGGATACAAAGCTGAACTCAATGCAGCATTCTGTTGCAACTCTGGAGAAACTATGCAAAAGATATAACAGTTGTTTAGATTCGAATCCATTGATATTGACTCGTAAACGACGATAG
Homology
[Close]
BLAST of CSPI07G17400 vs. TrEMBL
Match: A0A0A0KAV9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G396460 PE=4 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 1.8e-103
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 1 

Query: 1   MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKGSVIQN 60
           MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKGSVIQN
Sbjct: 1   MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKGSVIQN 60

Query: 61  YKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSDDPDTVLDSSGSDVEEDDLKTALGKKR 120
           YKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSDDPDTVLDSSGSDVEEDDLKTALGKKR
Sbjct: 61  YKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSDDPDTVLDSSGSDVEEDDLKTALGKKR 120

Query: 121 KDGKSAPLQPLTTLQRVHVGKLIEKYGDDYQRMFMDTKLNSMQHSVATLEKLCKRYNSCL 180
           KDGKSAPLQPLTTLQRVHVGKLIEKYGDDYQRMFMDTKLNSMQHSVATLEKLCKRYNSCL
Sbjct: 121 KDGKSAPLQPLTTLQRVHVGKLIEKYGDDYQRMFMDTKLNSMQHSVATLEKLCKRYNSCL 180

Query: 181 DSNPLILTRKRR 193
           DSNPLILTRKRR
Sbjct: 181 DSNPLILTRKRR 192

[Close]
BLAST of CSPI07G17400 vs. TrEMBL
Match: B9SAP7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1177900 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 4.9e-69
Identity = 137/193 (70.98%), Postives = 160/193 (82.90%), Query Frame = 1 

Query: 1   MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKGSVIQN 60
           MGRSRRKY++SR KV VGLPKRNPNVFK +F  PPKLRSL+     +   WD+K SVIQN
Sbjct: 1   MGRSRRKYRESRAKVSVGLPKRNPNVFKAAFNFPPKLRSLVDADRSK---WDDKASVIQN 60

Query: 61  YKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSDDPDTVLDS-----SGSDVEEDDLKTA 120
           YKSFGV+SNPNLL VRSRT HIV+++SLQVPPS  P+  +D      SGSD+EEDDLK+A
Sbjct: 61  YKSFGVVSNPNLLGVRSRTSHIVQTESLQVPPSPPPEGPIDEFEPTDSGSDLEEDDLKSA 120

Query: 121 LGKKRKDGKSAPLQPLTTLQRVHVGKLIEKYGDDYQRMFMDTKLNSMQHSVATLEKLCKR 180
           LGKKR+DGKSAPLQPLTT+QR+H+G+LIEKYGD+YQ MFMD+KLN MQHS+ATLEK CKR
Sbjct: 121 LGKKRRDGKSAPLQPLTTMQRIHIGRLIEKYGDNYQAMFMDSKLNVMQHSIATLEKFCKR 180

Query: 181 YNSCLDSNPLILT 189
           Y S  D NPLIL+
Sbjct: 181 YLSYRDKNPLILS 190

[Close]
BLAST of CSPI07G17400 vs. TrEMBL
Match: M5W6W3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012023mg PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 8.4e-69
Identity = 132/187 (70.59%), Postives = 157/187 (83.96%), Query Frame = 1 

Query: 1   MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKGSVIQN 60
           MGRSRRKYK+SR KV+V LPKR PNVFK +FC+PPKLR+LL +Q     +WD +G+VI+N
Sbjct: 1   MGRSRRKYKQSRTKVRVALPKRKPNVFKAAFCLPPKLRALLEQQGPSSASWDAEGTVIEN 60

Query: 61  YKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSDDPDTVLDSSGSDVEEDDLKTALGKKR 120
           YKSFG +SNPNLL VRSRT H++ESDSLQVPP   P       GSDVEEDDL+++LGKKR
Sbjct: 61  YKSFGFVSNPNLLGVRSRTSHMIESDSLQVPPPP-PSGDEPVDGSDVEEDDLRSSLGKKR 120

Query: 121 KDGKSAPLQPLTTLQRVHVGKLIEKYGDDYQRMFMDTKLNSMQHSVATLEKLCKRYNSCL 180
           +DGKSAPLQPLT +QRV++G+LIEKYGDDYQ MFMDTKLN+MQHSVATLEKLCKRY+   
Sbjct: 121 RDGKSAPLQPLTAMQRVYIGRLIEKYGDDYQGMFMDTKLNAMQHSVATLEKLCKRYHVHK 180

Query: 181 DSNPLIL 188
           D NPL++
Sbjct: 181 DKNPLLI 186

[Close]
BLAST of CSPI07G17400 vs. TrEMBL
Match: V4TVI0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022428mg PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 1.1e-68
Identity = 136/191 (71.20%), Postives = 162/191 (84.82%), Query Frame = 1 

Query: 1   MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKGSVIQN 60
           MGRSRRKYK+SR KV+VGLPK+NP++FKP+F +PPKLRSL+    +E P WD K SVIQN
Sbjct: 1   MGRSRRKYKRSRTKVRVGLPKKNPHLFKPAFSLPPKLRSLV----DELPQWDGKASVIQN 60

Query: 61  YKSFGVISNPNLLSVRSRTDHIVESDSLQVP-PSDDPDTVLD--SSGSDVEEDDLKTALG 120
           YKSFG++SNPNLL VRSRT HIVES+SLQV  PSD+P    +   SGSD+EEDD+K+ALG
Sbjct: 61  YKSFGLVSNPNLLGVRSRTSHIVESESLQVTQPSDEPANEFEPIDSGSDLEEDDVKSALG 120

Query: 121 KKRKDGKSAPLQPLTTLQRVHVGKLIEKYGDDYQRMFMDTKLNSMQHSVATLEKLCKRYN 180
           KKRKDGK+A LQPLTT+QRV++G+L+E YGDDYQ MF DTKLN+MQHSVATLEKLCKRY+
Sbjct: 121 KKRKDGKTASLQPLTTIQRVYIGRLVETYGDDYQAMFRDTKLNAMQHSVATLEKLCKRYD 180

Query: 181 SCLDSNPLILT 189
            C D NPLI +
Sbjct: 181 ICKDKNPLIFS 187

[Close]
BLAST of CSPI07G17400 vs. TrEMBL
Match: A0A067HGU8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029757mg PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 1.1e-68
Identity = 136/191 (71.20%), Postives = 162/191 (84.82%), Query Frame = 1 

Query: 1   MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKGSVIQN 60
           MGRSRRKYK+SR KV+VGLPK+NP++FKP+F +PPKLRSL+    +E P WD K SVIQN
Sbjct: 1   MGRSRRKYKRSRTKVRVGLPKKNPHLFKPAFSLPPKLRSLV----DELPQWDGKASVIQN 60

Query: 61  YKSFGVISNPNLLSVRSRTDHIVESDSLQVP-PSDDPDTVLD--SSGSDVEEDDLKTALG 120
           YKSFG++SNPNLL VRSRT HIVES+SLQV  PSD+P    +   SGSD+EEDD+K+ALG
Sbjct: 61  YKSFGLVSNPNLLGVRSRTSHIVESESLQVTQPSDEPANEFEPIDSGSDLEEDDVKSALG 120

Query: 121 KKRKDGKSAPLQPLTTLQRVHVGKLIEKYGDDYQRMFMDTKLNSMQHSVATLEKLCKRYN 180
           KKRKDGK+A LQPLTT+QRV++G+L+E YGDDYQ MF DTKLN+MQHSVATLEKLCKRY+
Sbjct: 121 KKRKDGKTASLQPLTTIQRVYIGRLVETYGDDYQAMFRDTKLNAMQHSVATLEKLCKRYD 180

Query: 181 SCLDSNPLILT 189
            C D NPLI +
Sbjct: 181 ICKDKNPLIFS 187

[Close]
BLAST of CSPI07G17400 vs. TAIR10
Match: AT1G02870.1 (AT1G02870.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 243.8 bits (621), Expect = 8.6e-65
Identity = 122/197 (61.93%), Postives = 153/197 (77.66%), Query Frame = 1 

Query: 1   MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKGSVIQN 60
           M RSRRKY+ SR KV+V LPK+NPN+FKP+F  PPKLR+L+ +     P WD++ SVIQN
Sbjct: 1   MARSRRKYRNSRAKVRVALPKKNPNIFKPAFNFPPKLRALMGDDV---PEWDDQASVIQN 60

Query: 61  YKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSDDPDT---------VLDSSGSDVEEDD 120
           YKSFGVISNPNLL +R+RTDH+++ DSL VPP  +P T          +DS GS++EEDD
Sbjct: 61  YKSFGVISNPNLLGIRARTDHMIQDDSLNVPPPVEPPTDDPIAKEFEPIDS-GSELEEDD 120

Query: 121 LKTALGKKRKDGKSAPLQPLTTLQRVHVGKLIEKYGDDYQRMFMDTKLNSMQHSVATLEK 180
           LKTALGK+RKDGKSAPLQPLTT+QR H+ +L+EK+GDD + M+ D KLNSMQHSVATL K
Sbjct: 121 LKTALGKQRKDGKSAPLQPLTTMQRTHIRRLVEKHGDDIEGMYRDRKLNSMQHSVATLRK 180

Query: 181 LCKRYNSCLDSNPLILT 189
           LC RY    D NP++++
Sbjct: 181 LCTRYQIYKDKNPILVS 193

[Close]
BLAST of CSPI07G17400 vs. NCBI nr
Match: gi|449436503|ref|XP_004136032.1| (PREDICTED: uncharacterized protein LOC101209910 [Cucumis sativus])

HSP 1 Score: 383.3 bits (983), Expect = 2.6e-103
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 1 

Query: 1   MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKGSVIQN 60
           MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKGSVIQN
Sbjct: 1   MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKGSVIQN 60

Query: 61  YKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSDDPDTVLDSSGSDVEEDDLKTALGKKR 120
           YKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSDDPDTVLDSSGSDVEEDDLKTALGKKR
Sbjct: 61  YKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSDDPDTVLDSSGSDVEEDDLKTALGKKR 120

Query: 121 KDGKSAPLQPLTTLQRVHVGKLIEKYGDDYQRMFMDTKLNSMQHSVATLEKLCKRYNSCL 180
           KDGKSAPLQPLTTLQRVHVGKLIEKYGDDYQRMFMDTKLNSMQHSVATLEKLCKRYNSCL
Sbjct: 121 KDGKSAPLQPLTTLQRVHVGKLIEKYGDDYQRMFMDTKLNSMQHSVATLEKLCKRYNSCL 180

Query: 181 DSNPLILTRKRR 193
           DSNPLILTRKRR
Sbjct: 181 DSNPLILTRKRR 192

[Close]
BLAST of CSPI07G17400 vs. NCBI nr
Match: gi|659101400|ref|XP_008451586.1| (PREDICTED: uncharacterized protein LOC103492822 [Cucumis melo])

HSP 1 Score: 374.4 bits (960), Expect = 1.2e-100
Identity = 187/190 (98.42%), Postives = 189/190 (99.47%), Query Frame = 1 

Query: 1   MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKGSVIQN 60
           MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKGSVIQN
Sbjct: 1   MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKGSVIQN 60

Query: 61  YKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSDDPDTVLDSSGSDVEEDDLKTALGKKR 120
           YKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSDDPD+VLDSSGSDVEEDDLKTALGKKR
Sbjct: 61  YKSFGVISNPNLLSVRSRTDHIVESDSLQVPPSDDPDSVLDSSGSDVEEDDLKTALGKKR 120

Query: 121 KDGKSAPLQPLTTLQRVHVGKLIEKYGDDYQRMFMDTKLNSMQHSVATLEKLCKRYNSCL 180
           KDGKSAPLQPLTTLQRVHVGKLIEKYGDDYQRMFMDTKLNSMQHSVATLEKLCKRY+SCL
Sbjct: 121 KDGKSAPLQPLTTLQRVHVGKLIEKYGDDYQRMFMDTKLNSMQHSVATLEKLCKRYHSCL 180

Query: 181 DSNPLILTRK 191
           D NPLILTRK
Sbjct: 181 DKNPLILTRK 190

[Close]
BLAST of CSPI07G17400 vs. NCBI nr
Match: gi|694429134|ref|XP_009342100.1| (PREDICTED: nucleolar protein 16-like [Pyrus x bretschneideri])

HSP 1 Score: 285.8 bits (730), Expect = 5.6e-74
Identity = 144/195 (73.85%), Postives = 166/195 (85.13%), Query Frame = 1 

Query: 1   MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEED-PTWDEKGSVIQ 60
           MGRSRRKYK+SR KV+VGLPK+ PNVFKP+FC+PPKLR+LL +Q     P WD +GSVIQ
Sbjct: 1   MGRSRRKYKQSRTKVRVGLPKKKPNVFKPAFCLPPKLRALLEQQDPASAPQWDAEGSVIQ 60

Query: 61  NYKSFGVISNPNLLSVRSRTDHIVESDSLQVPP--SDDPDTVLD---SSGSDVEEDDLKT 120
           NYKSFG +SNPNLLS+R+R  H+VESDSLQVPP  SDDPD   +     GSD+EEDDLKT
Sbjct: 61  NYKSFGFVSNPNLLSLRARNSHVVESDSLQVPPPPSDDPDPAAELDFGDGSDLEEDDLKT 120

Query: 121 ALGKKRKDGKSAPLQPLTTLQRVHVGKLIEKYGDDYQRMFMDTKLNSMQHSVATLEKLCK 180
           +LGKKR+DGKSAPLQPLT +QR+H+G+LIEKYG+DYQRMFMDTKLN+MQHSVATLEKLCK
Sbjct: 121 SLGKKRRDGKSAPLQPLTAMQRLHIGRLIEKYGEDYQRMFMDTKLNAMQHSVATLEKLCK 180

Query: 181 RYNSCLDSNPLILTR 190
           RY    D NPLILTR
Sbjct: 181 RYRVHKDRNPLILTR 195

[Close]
BLAST of CSPI07G17400 vs. NCBI nr
Match: gi|694439440|ref|XP_009346606.1| (PREDICTED: uncharacterized protein LOC103938330 [Pyrus x bretschneideri])

HSP 1 Score: 285.0 bits (728), Expect = 9.6e-74
Identity = 145/195 (74.36%), Postives = 167/195 (85.64%), Query Frame = 1 

Query: 1   MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEED-PTWDEKGSVIQ 60
           MGRSRRKYK+SR KV+VGLPKR PNVFKP+FC+PPKLR+LL +Q     P WD +GSVIQ
Sbjct: 1   MGRSRRKYKQSRTKVRVGLPKRKPNVFKPAFCLPPKLRALLEQQGPASAPRWDAEGSVIQ 60

Query: 61  NYKSFGVISNPNLLSVRSRTDHIVESDSLQVPP--SDDPDTVLD---SSGSDVEEDDLKT 120
           NYKSFG +SNPNLLS+RSR  H+VESDSLQVPP  SDDPD   +   + GSD+EEDDLKT
Sbjct: 61  NYKSFGFVSNPNLLSLRSRNSHMVESDSLQVPPPPSDDPDASAELDFADGSDLEEDDLKT 120

Query: 121 ALGKKRKDGKSAPLQPLTTLQRVHVGKLIEKYGDDYQRMFMDTKLNSMQHSVATLEKLCK 180
           +LGKKR+DGKSAPLQPLT +QR+H+G+LIE+YGDDYQRMFMDTKLN+MQHSVATLEKLC 
Sbjct: 121 SLGKKRRDGKSAPLQPLTAMQRLHLGRLIEEYGDDYQRMFMDTKLNAMQHSVATLEKLCS 180

Query: 181 RYNSCLDSNPLILTR 190
           RY+   D NPLILTR
Sbjct: 181 RYHVHKDRNPLILTR 195

[Close]
BLAST of CSPI07G17400 vs. NCBI nr
Match: gi|694429249|ref|XP_009342154.1| (PREDICTED: nucleolar protein 16-like [Pyrus x bretschneideri])

HSP 1 Score: 285.0 bits (728), Expect = 9.6e-74
Identity = 143/195 (73.33%), Postives = 166/195 (85.13%), Query Frame = 1 

Query: 1   MGRSRRKYKKSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEED-PTWDEKGSVIQ 60
           MGRSRRKYK+SR KV+VGLPK+ PNVFKP+FC+PPKLR+LL +Q     P WD +GSVIQ
Sbjct: 1   MGRSRRKYKQSRTKVRVGLPKKKPNVFKPAFCLPPKLRALLEQQDPASAPQWDAEGSVIQ 60

Query: 61  NYKSFGVISNPNLLSVRSRTDHIVESDSLQVPP--SDDPDTVLD---SSGSDVEEDDLKT 120
           NYKSFG +SNPNLLS+R+R  H+VESDSLQVPP  SDDPD   +     GSD+EEDDLKT
Sbjct: 61  NYKSFGFVSNPNLLSLRARNSHVVESDSLQVPPPPSDDPDAAAELDFGDGSDLEEDDLKT 120

Query: 121 ALGKKRKDGKSAPLQPLTTLQRVHVGKLIEKYGDDYQRMFMDTKLNSMQHSVATLEKLCK 180
           +LGKKR+DGKSAPLQPLT +QR+H+G+LIEKYG+DYQRMFMDTKLN+MQHSVATLEKLCK
Sbjct: 121 SLGKKRRDGKSAPLQPLTAMQRLHIGRLIEKYGEDYQRMFMDTKLNAMQHSVATLEKLCK 180

Query: 181 RYNSCLDSNPLILTR 190
           RY+   D NP ILTR
Sbjct: 181 RYHVHKDRNPFILTR 195

The following BLAST results are available for this feature:
BLAST of CSPI07G17400 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI07G17400 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KAV9_CUCSA1.8e-103100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G396460 PE=4 SV=1[more]
B9SAP7_RICCO4.9e-6970.98Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1177900 PE=4 SV=1[more]
M5W6W3_PRUPE8.4e-6970.59Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012023mg PE=4 SV=1[more]
V4TVI0_9ROSI1.1e-6871.20Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022428mg PE=4 SV=1[more]
A0A067HGU8_CITSI1.1e-6871.20Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029757mg PE=4 SV=1[more]
BLAST of CSPI07G17400 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G02870.18.6e-6561.93 FUNCTIONS IN: molecular_function unknown[more]
BLAST of CSPI07G17400 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449436503|ref|XP_004136032.1|2.6e-103100.00PREDICTED: uncharacterized protein LOC101209910 [Cucumis sativus][more]
gi|659101400|ref|XP_008451586.1|1.2e-10098.42PREDICTED: uncharacterized protein LOC103492822 [Cucumis melo][more]
gi|694429134|ref|XP_009342100.1|5.6e-7473.85PREDICTED: nucleolar protein 16-like [Pyrus x bretschneideri][more]
gi|694439440|ref|XP_009346606.1|9.6e-7474.36PREDICTED: uncharacterized protein LOC103938330 [Pyrus x bretschneideri][more]
gi|694429249|ref|XP_009342154.1|9.6e-7473.33PREDICTED: nucleolar protein 16-like [Pyrus x bretschneideri][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR019002Ribosome_biogenesis_Nop16
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G17400.1CSPI07G17400.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019002Ribosome biogenesis protein Nop16PFAMPF09420Nop16coord: 98..176
score: 8.0E-17coord: 3..72
score: 4.
NoneNo IPR availablePANTHERPTHR13243HSPC111 PROTEIN-RELATEDcoord: 2..176
score: 2.4
NoneNo IPR availablePANTHERPTHR13243:SF1NUCLEOLAR PROTEIN 16coord: 2..176
score: 2.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI07G17400Cla015061Watermelon (97103) v1cpiwmB587
CSPI07G17400Csa7G396460Cucumber (Chinese Long) v2cpicuB354
CSPI07G17400MELO3C016009Melon (DHL92) v3.5.1cpimeB540
CSPI07G17400ClCG09G005940Watermelon (Charleston Gray)cpiwcgB555
CSPI07G17400Lsi02G023950Bottle gourd (USVL1VR-Ls)cpilsiB517
CSPI07G17400MELO3C016009.2Melon (DHL92) v3.6.1cpimedB525
CSPI07G17400CsaV3_7G029180Cucumber (Chinese Long) v3cpicucB414
CSPI07G17400Cla97C09G168490Watermelon (97103) v2cpiwmbB598
CSPI07G17400Bhi09G000709Wax gourdcpiwgoB703
CSPI07G17400Cucsa.205640Cucumber (Gy14) v1cgycpiB325
CSPI07G17400CmaCh08G004180Cucurbita maxima (Rimu)cmacpiB934
CSPI07G17400CmoCh17G010690Cucurbita moschata (Rifu)cmocpiB381
CSPI07G17400CmoCh08G004120Cucurbita moschata (Rifu)cmocpiB913
CSPI07G17400Cp4.1LG17g06980Cucurbita pepo (Zucchini)cpecpiB344
CSPI07G17400CsGy7G015850Cucumber (Gy14) v2cgybcpiB331
CSPI07G17400Carg12105Silver-seed gourdcarcpiB0599
CSPI07G17400Carg07177Silver-seed gourdcarcpiB0124
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI07G17400Wax gourdcpiwgoB658
CSPI07G17400Wax gourdcpiwgoB666
CSPI07G17400Wild cucumber (PI 183967)cpicpiB167
CSPI07G17400Cucumber (Gy14) v1cgycpiB106
CSPI07G17400Cucurbita maxima (Rimu)cmacpiB392
CSPI07G17400Cucumber (Chinese Long) v2cpicuB345
CSPI07G17400Melon (DHL92) v3.5.1cpimeB572
CSPI07G17400Watermelon (Charleston Gray)cpiwcgB560
CSPI07G17400Watermelon (97103) v1cpiwmB593
CSPI07G17400Cucurbita pepo (Zucchini)cpecpiB163
CSPI07G17400Bottle gourd (USVL1VR-Ls)cpilsiB530
CSPI07G17400Melon (DHL92) v3.6.1cpimedB557
CSPI07G17400Silver-seed gourdcarcpiB0855
CSPI07G17400Cucumber (Chinese Long) v3cpicucB402
CSPI07G17400Watermelon (97103) v2cpiwmbB541
CSPI07G17400Watermelon (97103) v2cpiwmbB564