Cucsa.201060 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.201060
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Tumor necrosis factor receptor superfamily member 21
Location	scaffold01374 : 4638 .. 6126 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGCCAAATTTCAAATATGCATCCAAACTCATTTTGCTCCCAATTTAATATTCATTTTATAATAACTTGAATCCCAGGCCCGAAGGTTACTACGGCGATACATTTTTTCAACGAACAGAGCATAGGGAAGGATTACTGGGGTTTGTTTTCTTCTCTGTCTGCTTTTGTTAGTAAAAAaGAAAAaTTAAGATGTTTGGGACTGCAGTAAGGTGTTTCGCGACGAAGCCAAAGCCCAAAATGAAACCGATAGAGCTTAAAACTCCACCGGAGCAAACCCAGACGATCACTAGAGCCATCTTCGACATTGTTAAGGAGCACGGTCCACTAACCATAGCCGAAACTTGGGACCGCGTTCAGGTAACAATGCTTTTTCTGTTTCCATTCCCTCATTTTTTAGCTTTCTCTTCAAATTTACGAATTACAAATTCCTTGTGTAACATCAATTATGTTAACACAGAAATTAGAATGATGGAATTCTGTTAGATGCTTTGATTCTTTTAATTGGGGTTTAGTTGTGACCTATAGATAGAAATGAGAATTTCGGTTTGATTTCTTACTGAGTCCTGGTTAAATGAGAAATGCCGTATTCTCAACACTCATAAGGGCATAAACATTGGGGATCCTTGATTAAAATGCTTTTAGTTTtAAGTTGTTGGACTTGGAATGTATCTGGCAGGGCTCAGTAGGAGAGGTGATTTTCAGTTTTACCTCCTAGGAAATTTTAGAGGTGGCTAGAAGGCTCGGTGCATAATTTGGTGGCAGGGTAGTTTCTTTGCTTTTTtGTGGAGAATTTAGCTTGAGAAGAATTATTGGATTTTTAGAGAGGTAGAGAACCCTAAATTTGAGAGGTGGCTAGCTTTAACGCTTCCTTATGGGTGTCAATCACTGGATTATTTTTGTAATTATAACCTTGTCCTTTTATAATTGTATCATTTCTGAAGATAGAATCAGTTTTGCTCTTTCGTAATTGTTGTCCAGAAGGATTTAGATGTTGCATAACAGCTCAACTAGAGTGGGCAATGTCACAGCTCTAGATCCTTTTTATCCTGTAACTTTGTGCTGTTTTATTAGTTATCTATGTCAGTAAGTGGCGTTGTACTAAGTTGATAATTGTCTATTCTTTTCCTTTCCAGGAAGTTGGTTTGAGAGGATTAACAAGCAAAAGGCATATGAAAATAGTGATGAGATGGATGAGGGAACGACAGAAGATAAGATTAATGTGCAACCACGTAGGACCTCATAAGCAGTTTCTTTATACCACCTGGTTCACAAAACCCAACTTCGAACAGGCAAAGCAACTGCAGCGCAATGTTTCACAACCGAAAAGGCCTTGAATGCCTACAGGTTACCTGTAAAGAAGCTTTGTTTTCTTGTTTCTTTATTTCTTTTTCATGGAAGTTGTTCTTTAGTTTTTCCACAAACGACAACTATATAGAACGAATGACCATAGGCAAGGATTTAAACACCGACCTTGTATAATTTTAGATCC

mRNA sequence

GGGCCAAATTTCAAATATGCATCCAAACTCATTTTGCTCCCAATTTAATATTCATTTTATAATAACTTGAATCCCAGGCCCGAAGGTTACTACGGCGATACATTTTTTCAACGAACAGAGCATAGGGAAGGATTACTGGGGTTTGTTTTCTTCTCTGTCTGCTTTTGTTAGTAAAAAAGAAAAATTAAGATGTTTGGGACTGCAGTAAGGTGTTTCGCGACGAAGCCAAAGCCCAAAATGAAACCGATAGAGCTTAAAACTCCACCGGAGCAAACCCAGACGATCACTAGAGCCATCTTCGACATTGTTAAGGAGCACGGTCCACTAACCATAGCCGAAACTTGGGACCGCGTTCAGGAAGTTGGTTTGAGAGGATTAACAAGCAAAAGGCATATGAAAATAGTGATGAGATGGATGAGGGAACGACAGAAGATAAGATTAATGTGCAACCACGTAGGACCTCATAAGCAGTTTCTTTATACCACCTGGTTCACAAAACCCAACTTCGAACAGGCAAAGCAACTGCAGCGCAATGTTTCACAACCGAAAAGGCCTTGAATGCCTACAGGTTACCTGTAAAGAAGCTTTGTTTTCTTGTTTCTTTATTTCTTTTTCATGGAAGTTGTTCTTTAGTTTTTCCACAAACGACAACTATATAGAACGAATGACCATAGGCAAGGATTTAAACACCGACCTTGTATAATTTTAGATCC

Coding sequence (CDS)

ATGTTTGGGACTGCAGTAAGGTGTTTCGCGACGAAGCCAAAGCCCAAAATGAAACCGATAGAGCTTAAAACTCCACCGGAGCAAACCCAGACGATCACTAGAGCCATCTTCGACATTGTTAAGGAGCACGGTCCACTAACCATAGCCGAAACTTGGGACCGCGTTCAGGAAGTTGGTTTGAGAGGATTAACAAGCAAAAGGCATATGAAAATAGTGATGAGATGGATGAGGGAACGACAGAAGATAAGATTAATGTGCAACCACGTAGGACCTCATAAGCAGTTTCTTTATACCACCTGGTTCACAAAACCCAACTTCGAACAGGCAAAGCAACTGCAGCGCAATGTTTCACAACCGAAAAGGCCTTGA

Protein sequence

MFGTAVRCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGLRGLTSKRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPNFEQAKQLQRNVSQPKRP*

Homology

[Close]

BLAST of Cucsa.201060 vs. TrEMBL
Match: A0A0A0KY02_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G045020 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 5.6e-66
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 1


Query: 1   MFGTAVRCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGL 60
           MFGTAVRCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGL
Sbjct: 1   MFGTAVRCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGL 60

Query: 61  RGLTSKRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPNFEQAKQLQRNVSQPK 120
           RGLTSKRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPNFEQAKQLQRNVSQPK
Sbjct: 61  RGLTSKRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPNFEQAKQLQRNVSQPK 120

Query: 121 RP 123
           RP
Sbjct: 121 RP 122

[Close]

BLAST of Cucsa.201060 vs. TrEMBL
Match: M5W478_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015779mg PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 9.2e-53
Identity = 99/122 (81.15%), Postives = 108/122 (88.52%), Query Frame = 1


Query: 1   MFGTAVRCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGL 60
           MFGTA+RC A KPKP+MKPIELKTPPEQTQTITRAIFDIVKEHGPLTI ETWD V+EVGL
Sbjct: 1   MFGTAIRCIARKPKPQMKPIELKTPPEQTQTITRAIFDIVKEHGPLTITETWDHVKEVGL 60

Query: 61  RGLTSKRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPNFEQAKQLQRNVSQPK 120
           RGLTSKRHMKIV+RWMRERQK+RL+CNHVGP KQFLYTTWFTKPN +Q  +   +  QPK
Sbjct: 61  RGLTSKRHMKIVLRWMRERQKLRLICNHVGPQKQFLYTTWFTKPNLKQQGKPVNDSPQPK 120

Query: 121 RP 123
            P
Sbjct: 121 SP 122

[Close]

BLAST of Cucsa.201060 vs. TrEMBL
Match: U5GHM4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s12090g PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 3.5e-52
Identity = 100/121 (82.64%), Postives = 111/121 (91.74%), Query Frame = 1


Query: 1   MFGTAVRCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGL 60
           MF  A+R F+TKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETW++VQEVGL
Sbjct: 1   MFRAAIRYFSTKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWEKVQEVGL 60

Query: 61  RGLTSKRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPNFE-QAKQLQRNVSQP 120
           R LTSKRHMKIV+RWMRERQK++L+CNHVGPHKQFLYTTWFTKPNF+ QAK + +  S P
Sbjct: 61  RRLTSKRHMKIVLRWMRERQKLKLICNHVGPHKQFLYTTWFTKPNFKLQAKPVNKQPSLP 120

[Close]

BLAST of Cucsa.201060 vs. TrEMBL
Match: A0A061EKV8_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_017340 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 6.6e-51
Identity = 97/131 (74.05%), Postives = 111/131 (84.73%), Query Frame = 1


Query: 1   MFGTAVRCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGL 60
           MFG+A+R F+TKPKPKMKPIELKTPPEQTQTITR IFDI+KEHGPLT+ +TW+RV+EVGL
Sbjct: 1   MFGSAIRYFSTKPKPKMKPIELKTPPEQTQTITRVIFDILKEHGPLTVGDTWERVKEVGL 60

Query: 61  RGLTSKRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPNFEQAKQLQ------- 120
           RGLTSKRHMKIV+RWMRERQK+RL+CNHVGPHKQFLYTTWFTK N  QA+ ++       
Sbjct: 61  RGLTSKRHMKIVLRWMRERQKLRLICNHVGPHKQFLYTTWFTKSNIGQARPVKNSSATSL 120

Query: 121 --RNVSQPKRP 123
              N S PK P
Sbjct: 121 PVNNSSSPKSP 131

[Close]

BLAST of Cucsa.201060 vs. TrEMBL
Match: W9S3U6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_013253 PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 2.5e-50
Identity = 98/122 (80.33%), Postives = 106/122 (86.89%), Query Frame = 1


Query: 1   MFGTAVRCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGL 60
           MF TA+R  A K KP+MKP+ELKTPPEQTQTITR IFDIVKEHGPLTIAETWD V+EVGL
Sbjct: 1   MFATAIRYMAKKGKPEMKPMELKTPPEQTQTITRVIFDIVKEHGPLTIAETWDHVKEVGL 60

Query: 61  RGLTSKRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPNFEQAKQLQRNVSQPK 120
           RGLTSKRHMKIV+RWMRERQK+RL+CNHVGPHKQFLYTTWFTKPN +QAK     V  P 
Sbjct: 61  RGLTSKRHMKIVLRWMRERQKLRLICNHVGPHKQFLYTTWFTKPNMKQAKP----VKAPP 118

Query: 121 RP 123
           RP
Sbjct: 121 RP 118

[Close]

BLAST of Cucsa.201060 vs. TAIR10
Match: AT5G49410.1 (AT5G49410.1 unknown protein)

HSP 1 Score: 194.1 bits (492), Expect = 5.0e-50
Identity = 88/103 (85.44%), Postives = 96/103 (93.20%), Query Frame = 1


Query: 3   GTAVRCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGLRG 62
           G   R FATKPKPKMKPIEL TPPEQTQTITR IFDI+K+HGPLTIAETWDRV+EVGLRG
Sbjct: 18  GMLTRHFATKPKPKMKPIELNTPPEQTQTITRVIFDILKDHGPLTIAETWDRVKEVGLRG 77

Query: 63  LTSKRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPN 106
           LTSKRHMKI++RWMRERQK++L+CNHVGPHKQFLYTTWFTK N
Sbjct: 78  LTSKRHMKIILRWMRERQKLKLICNHVGPHKQFLYTTWFTKHN 120

[Close]

BLAST of Cucsa.201060 vs. TAIR10
Match: AT1G73940.1 (AT1G73940.1 unknown protein)

HSP 1 Score: 88.2 bits (217), Expect = 3.9e-18
Identity = 39/103 (37.86%), Postives = 64/103 (62.14%), Query Frame = 1


Query: 6   VRCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGLRGLTS 65
           VR  + +    ++ I  K P ++   I+ +++D+ K HGPL++  TW R QE G+ GL S
Sbjct: 31  VRYMSRERAVNVRKINPKVPIQEAYAISNSLYDLFKLHGPLSVPNTWLRAQEAGVSGLNS 90

Query: 66  KRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPNFEQ 109
           K HMK++++WMR ++ ++L+CN VG  K+F +T     P  EQ
Sbjct: 91  KTHMKLLLKWMRGKKMLKLICNQVGSSKKFFHTVLPEDPLQEQ 133

[Close]

BLAST of Cucsa.201060 vs. NCBI nr
Match: gi|449457514|ref|XP_004146493.1| (PREDICTED: uncharacterized protein LOC101203168 [Cucumis sativus])

HSP 1 Score: 258.1 bits (658), Expect = 8.0e-66
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 1


Query: 1   MFGTAVRCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGL 60
           MFGTAVRCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGL
Sbjct: 1   MFGTAVRCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGL 60

Query: 61  RGLTSKRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPNFEQAKQLQRNVSQPK 120
           RGLTSKRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPNFEQAKQLQRNVSQPK
Sbjct: 61  RGLTSKRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPNFEQAKQLQRNVSQPK 120

Query: 121 RP 123
           RP
Sbjct: 121 RP 122

[Close]

BLAST of Cucsa.201060 vs. NCBI nr
Match: gi|659102404|ref|XP_008452111.1| (PREDICTED: uncharacterized protein LOC103493216 [Cucumis melo])

HSP 1 Score: 252.3 bits (643), Expect = 4.4e-64
Identity = 119/122 (97.54%), Postives = 120/122 (98.36%), Query Frame = 1


Query: 1   MFGTAVRCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGL 60
           MF TA+RCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGL
Sbjct: 1   MFRTAIRCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGL 60

Query: 61  RGLTSKRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPNFEQAKQLQRNVSQPK 120
           RGLTSKRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPNFEQAKQLQRNVSQPK
Sbjct: 61  RGLTSKRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPNFEQAKQLQRNVSQPK 120

Query: 121 RP 123
            P
Sbjct: 121 SP 122

[Close]

BLAST of Cucsa.201060 vs. NCBI nr
Match: gi|645273151|ref|XP_008241740.1| (PREDICTED: uncharacterized protein LOC103340142 [Prunus mume])

HSP 1 Score: 215.7 bits (548), Expect = 4.5e-53
Identity = 100/122 (81.97%), Postives = 109/122 (89.34%), Query Frame = 1


Query: 1   MFGTAVRCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGL 60
           MFGTA+RC A KPKP+MKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWD V+EVGL
Sbjct: 16  MFGTAIRCIARKPKPQMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDHVKEVGL 75

Query: 61  RGLTSKRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPNFEQAKQLQRNVSQPK 120
           RGLTSKRHMKIV+RWMRERQK+RL+CNHVGP KQFLYTTWFTKPN +Q  +   +  QPK
Sbjct: 76  RGLTSKRHMKIVLRWMRERQKLRLICNHVGPQKQFLYTTWFTKPNLKQQGKPVNDSPQPK 135

Query: 121 RP 123
            P
Sbjct: 136 SP 137

[Close]

BLAST of Cucsa.201060 vs. NCBI nr
Match: gi|595809217|ref|XP_007202879.1| (hypothetical protein PRUPE_ppa015779mg [Prunus persica])

HSP 1 Score: 214.2 bits (544), Expect = 1.3e-52
Identity = 99/122 (81.15%), Postives = 108/122 (88.52%), Query Frame = 1


Query: 1   MFGTAVRCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGL 60
           MFGTA+RC A KPKP+MKPIELKTPPEQTQTITRAIFDIVKEHGPLTI ETWD V+EVGL
Sbjct: 1   MFGTAIRCIARKPKPQMKPIELKTPPEQTQTITRAIFDIVKEHGPLTITETWDHVKEVGL 60

Query: 61  RGLTSKRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPNFEQAKQLQRNVSQPK 120
           RGLTSKRHMKIV+RWMRERQK+RL+CNHVGP KQFLYTTWFTKPN +Q  +   +  QPK
Sbjct: 61  RGLTSKRHMKIVLRWMRERQKLRLICNHVGPQKQFLYTTWFTKPNLKQQGKPVNDSPQPK 120

Query: 121 RP 123
            P
Sbjct: 121 SP 122

[Close]

BLAST of Cucsa.201060 vs. NCBI nr
Match: gi|566170935|ref|XP_006383155.1| (hypothetical protein POPTR_0005s12090g [Populus trichocarpa])

HSP 1 Score: 212.2 bits (539), Expect = 5.0e-52
Identity = 100/121 (82.64%), Postives = 111/121 (91.74%), Query Frame = 1


Query: 1   MFGTAVRCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGL 60
           MF  A+R F+TKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETW++VQEVGL
Sbjct: 1   MFRAAIRYFSTKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWEKVQEVGL 60

Query: 61  RGLTSKRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPNFE-QAKQLQRNVSQP 120
           R LTSKRHMKIV+RWMRERQK++L+CNHVGPHKQFLYTTWFTKPNF+ QAK + +  S P
Sbjct: 61  RRLTSKRHMKIVLRWMRERQKLKLICNHVGPHKQFLYTTWFTKPNFKLQAKPVNKQPSLP 120

The following BLAST results are available for this feature:

BLAST of Cucsa.201060 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KY02_CUCSA	5.6e-66	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G045020 PE=4 SV=1	[more]
M5W478_PRUPE	9.2e-53	81.15	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015779mg PE=4 SV=1	[more]
U5GHM4_POPTR	3.5e-52	82.64	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s12090g PE=4 SV=1	[more]
A0A061EKV8_THECC	6.6e-51	74.05	Uncharacterized protein OS=Theobroma cacao GN=TCM_017340 PE=4 SV=1	[more]
W9S3U6_9ROSA	2.5e-50	80.33	Uncharacterized protein OS=Morus notabilis GN=L484_013253 PE=4 SV=1	[more]

BLAST of Cucsa.201060 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G49410.1	5.0e-50	85.44	unknown protein	[more]
AT1G73940.1	3.9e-18	37.86	unknown protein	[more]

BLAST of Cucsa.201060 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449457514\|ref\|XP_004146493.1\|	8.0e-66	100.00	PREDICTED: uncharacterized protein LOC101203168 [Cucumis sativus]	[more]
gi\|659102404\|ref\|XP_008452111.1\|	4.4e-64	97.54	PREDICTED: uncharacterized protein LOC103493216 [Cucumis melo]	[more]
gi\|645273151\|ref\|XP_008241740.1\|	4.5e-53	81.97	PREDICTED: uncharacterized protein LOC103340142 [Prunus mume]	[more]
gi\|595809217\|ref\|XP_007202879.1\|	1.3e-52	81.15	hypothetical protein PRUPE_ppa015779mg [Prunus persica]	[more]
gi\|566170935\|ref\|XP_006383155.1\|	5.0e-52	82.64	hypothetical protein POPTR_0005s12090g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.201060.1	Cucsa.201060.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35110	FAMILY NOT NAMED	coord: 1..122 score: 2.3
None	No IPR available	PANTHER	PTHR35110:SF1	SUBFAMILY NOT NAMED	coord: 1..122 score: 2.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.201060	Cla014566	Watermelon (97103) v1	cgywmB395
Cucsa.201060	Csa4G045020	Cucumber (Chinese Long) v2	cgycuB306
Cucsa.201060	MELO3C016404	Melon (DHL92) v3.5.1	cgymeB366
Cucsa.201060	ClCG07G008720	Watermelon (Charleston Gray)	cgywcgB372
Cucsa.201060	CSPI04G05290	Wild cucumber (PI 183967)	cgycpiB319
Cucsa.201060	CmaCh04G007630	Cucurbita maxima (Rimu)	cgycmaB0596
Cucsa.201060	CmoCh04G008130	Cucurbita moschata (Rifu)	cgycmoB0596
Cucsa.201060	Cp4.1LG01g07040	Cucurbita pepo (Zucchini)	cgycpeB0569
Cucsa.201060	MELO3C016404.2	Melon (DHL92) v3.6.1	cgymedB362
Cucsa.201060	CsaV3_4G005440	Cucumber (Chinese Long) v3	cgycucB323
Cucsa.201060	Cla97C07G135780	Watermelon (97103) v2	cgywmbB376
Cucsa.201060	Bhi01G001877	Wax gourd	cgywgoB423
Cucsa.201060	Carg14161	Silver-seed gourd	carcgyB1060

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None