Carg14161 (gene) Silver-seed gourd

NameCarg14161
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionThiamine-phosphate synthase
LocationCucurbita_argyrosperma_scaffold_045 : 322645 .. 323751 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCTGGACTGCAATAAGGTATTTCGCGACGAAGCCAAAGCCGAAGATGAAGCCGATTGAGTTGAAAACTCCACCGGAGCAAACGCAGACGATCACTAGAGTTATATTCGACATCGTTAGGGAGCATGGTCCGCTAACCATAGCCGAAACTTGGGATCGCGTTCAGGTAAGCATCGTATTCCTGTTTCTGTTTCGTCATTTTCATGTTTTGCTTCAATTTTATTTCGATTTCTCCATCTCATCTCTCTATGAATTGTGGAAATTTATTATTCTATATGAATTAGATTCACATAGAAATCAGAATGATGGAAGACCGCTAGAGTAGATGCTTTGATCATTTCAATTGGGGTTTAGTTTTGACCGTGAAGAATAGTTGGAAATGAGAATTCGGTTTTGCATTCTTGTTGAATTAATTGTTCAAGACAGTTTCATCTCGGGAGAAATGTTGCCTCTTTCCAGCATTTTAGGCTTCAAAGTTCTAAAAAACTAGTGTTACATTTAACCCATCCAAATGCCTCAGAAGTGCATACTTTCATAGATGATGGGCTCCCAATGTACCAAGTCTGAGTTGCTCTTTAGAAATGAAGGACACGGTTGTAAAACCTAATTAACAGATCCTGTTCAAGTAAGGTAGAAAGTCTGAGTTGCTCAAATCCTAGTCAAATGACCATTGCCGTATTTTCCATTAACAATGGGGATGATTGATGAAAGTGCTTTTAGCTTTTGAGTTGGTTTCTGTGTTGAAGGGTATTGGTGTAGTCATGTAACATAATAGCTCAACTAGAATGGGAAATGTCACAGTTCTGGGTACTGTTTGTTCTGTAACTTGGTGCTATTTTGTTAGAAAAAATCTTTATACGTAAATGGTGTTGTAATGAGCTGATAAGCGTCCATTTATTTTCAGGAAGTGGGTTTGAGAGGATTAACAAGCAAAAGGCACATGAAAATAGTGATGAGATGGATGAGGGAACGGCAGAAGTTAAGACTGATGTGCAATCACGTAGGACCTAATAAGCAGTTTCTTTATACCACCTGGTTCACAAAACCCAACTTCGGACAGGCAAAGCCACAGGGGCGTAATTCTTCCCAACCCAAGAGCCCTTGA

mRNA sequence

ATGTTCTGGACTGCAATAAGGTATTTCGCGACGAAGCCAAAGCCGAAGATGAAGCCGATTGAGTTGAAAACTCCACCGGAGCAAACGCAGACGATCACTAGAGTTATATTCGACATCGTTAGGGAGCATGGTCCGCTAACCATAGCCGAAACTTGGGATCGCGTTCAGGAAGTGGGTTTGAGAGGATTAACAAGCAAAAGGCACATGAAAATAGTGATGAGATGGATGAGGGAACGGCAGAAGTTAAGACTGATGTGCAATCACGTAGGACCTAATAAGCAGTTTCTTTATACCACCTGGTTCACAAAACCCAACTTCGGACAGGCAAAGCCACAGGGGCGTAATTCTTCCCAACCCAAGAGCCCTTGA

Coding sequence (CDS)

ATGTTCTGGACTGCAATAAGGTATTTCGCGACGAAGCCAAAGCCGAAGATGAAGCCGATTGAGTTGAAAACTCCACCGGAGCAAACGCAGACGATCACTAGAGTTATATTCGACATCGTTAGGGAGCATGGTCCGCTAACCATAGCCGAAACTTGGGATCGCGTTCAGGAAGTGGGTTTGAGAGGATTAACAAGCAAAAGGCACATGAAAATAGTGATGAGATGGATGAGGGAACGGCAGAAGTTAAGACTGATGTGCAATCACGTAGGACCTAATAAGCAGTTTCTTTATACCACCTGGTTCACAAAACCCAACTTCGGACAGGCAAAGCCACAGGGGCGTAATTCTTCCCAACCCAAGAGCCCTTGA

Protein sequence

MFWTAIRYFATKPKPKMKPIELKTPPEQTQTITRVIFDIVREHGPLTIAETWDRVQEVGLRGLTSKRHMKIVMRWMRERQKLRLMCNHVGPNKQFLYTTWFTKPNFGQAKPQGRNSSQPKSP
BLAST of Carg14161 vs. NCBI nr
Match: XP_022942849.1 (uncharacterized protein LOC111447756 [Cucurbita moschata] >XP_023527194.1 uncharacterized protein LOC111790503 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 255.8 bits (652), Expect = 7.6e-65
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0

Query: 1   MFWTAIRYFATKPKPKMKPIELKTPPEQTQTITRVIFDIVREHGPLTIAETWDRVQEVGL 60
           MFWTAIRYFATKPKPKMKPIELKTPPEQTQTITRVIFDIVREHGPLTIAETWDRVQEVGL
Sbjct: 1   MFWTAIRYFATKPKPKMKPIELKTPPEQTQTITRVIFDIVREHGPLTIAETWDRVQEVGL 60

Query: 61  RGLTSKRHMKIVMRWMRERQKLRLMCNHVGPNKQFLYTTWFTKPNFGQAKPQGRNSSQPK 120
           RGLTSKRHMKIVMRWMRERQKLRLMCNHVGPNKQFLYTTWFTKPNFGQAKPQGRNSSQPK
Sbjct: 61  RGLTSKRHMKIVMRWMRERQKLRLMCNHVGPNKQFLYTTWFTKPNFGQAKPQGRNSSQPK 120

Query: 121 SP 123
           SP
Sbjct: 121 SP 122

BLAST of Carg14161 vs. NCBI nr
Match: XP_022983421.1 (uncharacterized protein LOC111482027 [Cucurbita maxima])

HSP 1 Score: 254.6 bits (649), Expect = 1.7e-64
Identity = 121/122 (99.18%), Postives = 122/122 (100.00%), Query Frame = 0

Query: 1   MFWTAIRYFATKPKPKMKPIELKTPPEQTQTITRVIFDIVREHGPLTIAETWDRVQEVGL 60
           MFWTAIRYFATKPKPKMKPIELKTPPEQTQTITRVIFDIVREHGPLTIAETWDRVQEVGL
Sbjct: 1   MFWTAIRYFATKPKPKMKPIELKTPPEQTQTITRVIFDIVREHGPLTIAETWDRVQEVGL 60

Query: 61  RGLTSKRHMKIVMRWMRERQKLRLMCNHVGPNKQFLYTTWFTKPNFGQAKPQGRNSSQPK 120
           RGLTSKRHMKIVMRWMRERQKLRL+CNHVGPNKQFLYTTWFTKPNFGQAKPQGRNSSQPK
Sbjct: 61  RGLTSKRHMKIVMRWMRERQKLRLLCNHVGPNKQFLYTTWFTKPNFGQAKPQGRNSSQPK 120

Query: 121 SP 123
           SP
Sbjct: 121 SP 122

BLAST of Carg14161 vs. NCBI nr
Match: XP_022136836.1 (uncharacterized protein LOC111008437 isoform X1 [Momordica charantia] >XP_022136837.1 uncharacterized protein LOC111008437 isoform X1 [Momordica charantia] >XP_022136838.1 uncharacterized protein LOC111008437 isoform X1 [Momordica charantia])

HSP 1 Score: 235.7 bits (600), Expect = 8.2e-59
Identity = 113/122 (92.62%), Postives = 117/122 (95.90%), Query Frame = 0

Query: 1   MFWTAIRYFATKPKPKMKPIELKTPPEQTQTITRVIFDIVREHGPLTIAETWDRVQEVGL 60
           MF TAIRYFATKPKPKMKPIEL TPPEQTQTITRVIFDIV+EHGPLTIAETWDRVQEVGL
Sbjct: 1   MFGTAIRYFATKPKPKMKPIELNTPPEQTQTITRVIFDIVKEHGPLTIAETWDRVQEVGL 60

Query: 61  RGLTSKRHMKIVMRWMRERQKLRLMCNHVGPNKQFLYTTWFTKPNFGQAKPQGRNSSQPK 120
           RGLTSKRHMKIVMRWMRERQKLRLMCNH+G +KQFLYTTWFTK NFGQ+KPQGRNSS PK
Sbjct: 61  RGLTSKRHMKIVMRWMRERQKLRLMCNHIGSHKQFLYTTWFTKSNFGQSKPQGRNSSPPK 120

Query: 121 SP 123
           SP
Sbjct: 121 SP 122

BLAST of Carg14161 vs. NCBI nr
Match: XP_022136839.1 (uncharacterized protein LOC111008437 isoform X2 [Momordica charantia])

HSP 1 Score: 229.2 bits (583), Expect = 7.6e-57
Identity = 112/122 (91.80%), Postives = 116/122 (95.08%), Query Frame = 0

Query: 1   MFWTAIRYFATKPKPKMKPIELKTPPEQTQTITRVIFDIVREHGPLTIAETWDRVQEVGL 60
           MF TAIRYFATKPKPKMKPIEL TPPEQTQTITRVIFDIV+EHGPLTIAETWDRVQ VGL
Sbjct: 1   MFGTAIRYFATKPKPKMKPIELNTPPEQTQTITRVIFDIVKEHGPLTIAETWDRVQ-VGL 60

Query: 61  RGLTSKRHMKIVMRWMRERQKLRLMCNHVGPNKQFLYTTWFTKPNFGQAKPQGRNSSQPK 120
           RGLTSKRHMKIVMRWMRERQKLRLMCNH+G +KQFLYTTWFTK NFGQ+KPQGRNSS PK
Sbjct: 61  RGLTSKRHMKIVMRWMRERQKLRLMCNHIGSHKQFLYTTWFTKSNFGQSKPQGRNSSPPK 120

Query: 121 SP 123
           SP
Sbjct: 121 SP 121

BLAST of Carg14161 vs. NCBI nr
Match: XP_008452112.1 (PREDICTED: uncharacterized protein LOC103493216 [Cucumis melo])

HSP 1 Score: 227.3 bits (578), Expect = 2.9e-56
Identity = 111/122 (90.98%), Postives = 114/122 (93.44%), Query Frame = 0

Query: 1   MFWTAIRYFATKPKPKMKPIELKTPPEQTQTITRVIFDIVREHGPLTIAETWDRVQEVGL 60
           MF TAIR FATKPKPKMKPIELKTPPEQTQTITR IFDIV+EHGPLTIAETWDRVQEVGL
Sbjct: 1   MFRTAIRCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGL 60

Query: 61  RGLTSKRHMKIVMRWMRERQKLRLMCNHVGPNKQFLYTTWFTKPNFGQAKPQGRNSSQPK 120
           RGLTSKRHMKIVMRWMRERQK+RLMCNHVGP+KQFLYTTWFTKPNF QAK   RN SQPK
Sbjct: 61  RGLTSKRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPNFEQAKQLQRNVSQPK 120

Query: 121 SP 123
           SP
Sbjct: 121 SP 122

BLAST of Carg14161 vs. TAIR10
Match: AT5G49410.1 (unknown protein)

HSP 1 Score: 190.7 bits (483), Expect = 5.5e-49
Identity = 92/120 (76.67%), Postives = 106/120 (88.33%), Query Frame = 0

Query: 7   RYFATKPKPKMKPIELKTPPEQTQTITRVIFDIVREHGPLTIAETWDRVQEVGLRGLTSK 66
           R+FATKPKPKMKPIEL TPPEQTQTITRVIFDI+++HGPLTIAETWDRV+EVGLRGLTSK
Sbjct: 22  RHFATKPKPKMKPIELNTPPEQTQTITRVIFDILKDHGPLTIAETWDRVKEVGLRGLTSK 81

Query: 67  RHMKIVMRWMRERQKLRLMCNHVGPNKQFLYTTWFTKPN----FGQAKPQ---GRNSSQP 120
           RHMKI++RWMRERQKL+L+CNHVGP+KQFLYTTWFTK N    F +  P+   G++S  P
Sbjct: 82  RHMKIILRWMRERQKLKLICNHVGPHKQFLYTTWFTKHNPSSKFPKLPPENLTGKSSGHP 141

BLAST of Carg14161 vs. TAIR10
Match: AT1G73940.1 (unknown protein)

HSP 1 Score: 87.4 bits (215), Expect = 6.5e-18
Identity = 36/93 (38.71%), Postives = 62/93 (66.67%), Query Frame = 0

Query: 6   IRYFATKPKPKMKPIELKTPPEQTQTITRVIFDIVREHGPLTIAETWDRVQEVGLRGLTS 65
           +RY + +    ++ I  K P ++   I+  ++D+ + HGPL++  TW R QE G+ GL S
Sbjct: 31  VRYMSRERAVNVRKINPKVPIQEAYAISNSLYDLFKLHGPLSVPNTWLRAQEAGVSGLNS 90

Query: 66  KRHMKIVMRWMRERQKLRLMCNHVGPNKQFLYT 99
           K HMK++++WMR ++ L+L+CN VG +K+F +T
Sbjct: 91  KTHMKLLLKWMRGKKMLKLICNQVGSSKKFFHT 123

BLAST of Carg14161 vs. TrEMBL
Match: tr|A0A1S3BSH8|A0A1S3BSH8_CUCME (uncharacterized protein LOC103493216 OS=Cucumis melo OX=3656 GN=LOC103493216 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 1.9e-56
Identity = 111/122 (90.98%), Postives = 114/122 (93.44%), Query Frame = 0

Query: 1   MFWTAIRYFATKPKPKMKPIELKTPPEQTQTITRVIFDIVREHGPLTIAETWDRVQEVGL 60
           MF TAIR FATKPKPKMKPIELKTPPEQTQTITR IFDIV+EHGPLTIAETWDRVQEVGL
Sbjct: 1   MFRTAIRCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGL 60

Query: 61  RGLTSKRHMKIVMRWMRERQKLRLMCNHVGPNKQFLYTTWFTKPNFGQAKPQGRNSSQPK 120
           RGLTSKRHMKIVMRWMRERQK+RLMCNHVGP+KQFLYTTWFTKPNF QAK   RN SQPK
Sbjct: 61  RGLTSKRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPNFEQAKQLQRNVSQPK 120

Query: 121 SP 123
           SP
Sbjct: 121 SP 122

BLAST of Carg14161 vs. TrEMBL
Match: tr|A0A0A0KY02|A0A0A0KY02_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G045020 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 7.3e-56
Identity = 109/122 (89.34%), Postives = 113/122 (92.62%), Query Frame = 0

Query: 1   MFWTAIRYFATKPKPKMKPIELKTPPEQTQTITRVIFDIVREHGPLTIAETWDRVQEVGL 60
           MF TA+R FATKPKPKMKPIELKTPPEQTQTITR IFDIV+EHGPLTIAETWDRVQEVGL
Sbjct: 1   MFGTAVRCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGL 60

Query: 61  RGLTSKRHMKIVMRWMRERQKLRLMCNHVGPNKQFLYTTWFTKPNFGQAKPQGRNSSQPK 120
           RGLTSKRHMKIVMRWMRERQK+RLMCNHVGP+KQFLYTTWFTKPNF QAK   RN SQPK
Sbjct: 61  RGLTSKRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPNFEQAKQLQRNVSQPK 120

Query: 121 SP 123
            P
Sbjct: 121 RP 122

BLAST of Carg14161 vs. TrEMBL
Match: tr|A0A061EKV8|A0A061EKV8_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_017340 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.4e-51
Identity = 102/131 (77.86%), Postives = 114/131 (87.02%), Query Frame = 0

Query: 1   MFWTAIRYFATKPKPKMKPIELKTPPEQTQTITRVIFDIVREHGPLTIAETWDRVQEVGL 60
           MF +AIRYF+TKPKPKMKPIELKTPPEQTQTITRVIFDI++EHGPLT+ +TW+RV+EVGL
Sbjct: 1   MFGSAIRYFSTKPKPKMKPIELKTPPEQTQTITRVIFDILKEHGPLTVGDTWERVKEVGL 60

Query: 61  RGLTSKRHMKIVMRWMRERQKLRLMCNHVGPNKQFLYTTWFTKPNFGQAKP--------- 120
           RGLTSKRHMKIV+RWMRERQKLRL+CNHVGP+KQFLYTTWFTK N GQA+P         
Sbjct: 61  RGLTSKRHMKIVLRWMRERQKLRLICNHVGPHKQFLYTTWFTKSNIGQARPVKNSSATSL 120

Query: 121 QGRNSSQPKSP 123
              NSS PKSP
Sbjct: 121 PVNNSSSPKSP 131

BLAST of Carg14161 vs. TrEMBL
Match: tr|A0A2P5DDX5|A0A2P5DDX5_PARAD (Thiamine-phosphate synthase OS=Parasponia andersonii OX=3476 GN=PanWU01x14_072930 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 2.4e-51
Identity = 105/124 (84.68%), Postives = 112/124 (90.32%), Query Frame = 0

Query: 1   MFWTAIRYFATKPKPKMKPIELKTPPEQTQTITRVIFDIVREHGPLTIAETWDRVQEVGL 60
           MF TAIRYFATKPKPKMKPIELKTPPEQTQTITRVIFDIV+EHGPLTIAETWD V+EVGL
Sbjct: 1   MFGTAIRYFATKPKPKMKPIELKTPPEQTQTITRVIFDIVKEHGPLTIAETWDHVKEVGL 60

Query: 61  RGLTSKRHMKIVMRWMRERQKLRLMCNHVGPNKQFLYTTWFTKPNFG--QAKPQGRNSSQ 120
           RGLTSKRHMKIV+RWMRERQKLRL+CNHVGP+KQFLYTTWFTKPN G  Q KP   +  +
Sbjct: 61  RGLTSKRHMKIVLRWMRERQKLRLICNHVGPHKQFLYTTWFTKPNSGINQTKPI-NDPPK 120

Query: 121 PKSP 123
           PK P
Sbjct: 121 PKYP 123

BLAST of Carg14161 vs. TrEMBL
Match: tr|A0A2P5FP52|A0A2P5FP52_9ROSA (Thiamine-phosphate synthase OS=Trema orientalis OX=63057 GN=TorRG33x02_047360 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 7.1e-51
Identity = 104/124 (83.87%), Postives = 111/124 (89.52%), Query Frame = 0

Query: 1   MFWTAIRYFATKPKPKMKPIELKTPPEQTQTITRVIFDIVREHGPLTIAETWDRVQEVGL 60
           MF TAIRYFATKPKPKMKPIELKTPPEQTQTITRVIFDIV+EHGPLTIAETWD V+EVGL
Sbjct: 1   MFGTAIRYFATKPKPKMKPIELKTPPEQTQTITRVIFDIVKEHGPLTIAETWDHVKEVGL 60

Query: 61  RGLTSKRHMKIVMRWMRERQKLRLMCNHVGPNKQFLYTTWFTKPN--FGQAKPQGRNSSQ 120
           RGLTSKRHMKIV+RWMRERQKLRL+CNHVGP+KQFLYTTWFTKPN    Q KP   +  +
Sbjct: 61  RGLTSKRHMKIVLRWMRERQKLRLICNHVGPHKQFLYTTWFTKPNSSINQTKPI-NDPPK 120

Query: 121 PKSP 123
           PK P
Sbjct: 121 PKYP 123

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022942849.17.6e-65100.00uncharacterized protein LOC111447756 [Cucurbita moschata] >XP_023527194.1 unchar... [more]
XP_022983421.11.7e-6499.18uncharacterized protein LOC111482027 [Cucurbita maxima][more]
XP_022136836.18.2e-5992.62uncharacterized protein LOC111008437 isoform X1 [Momordica charantia] >XP_022136... [more]
XP_022136839.17.6e-5791.80uncharacterized protein LOC111008437 isoform X2 [Momordica charantia][more]
XP_008452112.12.9e-5690.98PREDICTED: uncharacterized protein LOC103493216 [Cucumis melo][more]
Match NameE-valueIdentityDescription
AT5G49410.15.5e-4976.67unknown protein[more]
AT1G73940.16.5e-1838.71unknown protein[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A1S3BSH8|A0A1S3BSH8_CUCME1.9e-5690.98uncharacterized protein LOC103493216 OS=Cucumis melo OX=3656 GN=LOC103493216 PE=... [more]
tr|A0A0A0KY02|A0A0A0KY02_CUCSA7.3e-5689.34Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G045020 PE=4 SV=1[more]
tr|A0A061EKV8|A0A061EKV8_THECC1.4e-5177.86Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_017340 PE=4 SV=1[more]
tr|A0A2P5DDX5|A0A2P5DDX5_PARAD2.4e-5184.68Thiamine-phosphate synthase OS=Parasponia andersonii OX=3476 GN=PanWU01x14_07293... [more]
tr|A0A2P5FP52|A0A2P5FP52_9ROSA7.1e-5183.87Thiamine-phosphate synthase OS=Trema orientalis OX=63057 GN=TorRG33x02_047360 PE... [more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg14161-RACarg14161-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35110:SF1SUBFAMILY NOT NAMEDcoord: 1..119
NoneNo IPR availablePANTHERPTHR35110FAMILY NOT NAMEDcoord: 1..119

The following gene(s) are paralogous to this gene:

None