Carg14161 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTCTGGACTGCAATAAGGTATTTCGCGACGAAGCCAAAGCCGAAGATGAAGCCGATTGAGTTGAAAACTCCACCGGAGCAAACGCAGACGATCACTAGAGTTATATTCGACATCGTTAGGGAGCATGGTCCGCTAACCATAGCCGAAACTTGGGATCGCGTTCAGGTAAGCATCGTATTCCTGTTTCTGTTTCGTCATTTTCATGTTTTGCTTCAATTTTATTTCGATTTCTCCATCTCATCTCTCTATGAATTGTGGAAATTTATTATTCTATATGAATTAGATTCACATAGAAATCAGAATGATGGAAGACCGCTAGAGTAGATGCTTTGATCATTTCAATTGGGGTTTAGTTTTGACCGTGAAGAATAGTTGGAAATGAGAATTCGGTTTTGCATTCTTGTTGAATTAATTGTTCAAGACAGTTTCATCTCGGGAGAAATGTTGCCTCTTTCCAGCATTTTAGGCTTCAAAGTTCTAAAAAACTAGTGTTACATTTAACCCATCCAAATGCCTCAGAAGTGCATACTTTCATAGATGATGGGCTCCCAATGTACCAAGTCTGAGTTGCTCTTTAGAAATGAAGGACACGGTTGTAAAACCTAATTAACAGATCCTGTTCAAGTAAGGTAGAAAGTCTGAGTTGCTCAAATCCTAGTCAAATGACCATTGCCGTATTTTCCATTAACAATGGGGATGATTGATGAAAGTGCTTTTAGCTTTTGAGTTGGTTTCTGTGTTGAAGGGTATTGGTGTAGTCATGTAACATAATAGCTCAACTAGAATGGGAAATGTCACAGTTCTGGGTACTGTTTGTTCTGTAACTTGGTGCTATTTTGTTAGAAAAAATCTTTATACGTAAATGGTGTTGTAATGAGCTGATAAGCGTCCATTTATTTTCAGGAAGTGGGTTTGAGAGGATTAACAAGCAAAAGGCACATGAAAATAGTGATGAGATGGATGAGGGAACGGCAGAAGTTAAGACTGATGTGCAATCACGTAGGACCTAATAAGCAGTTTCTTTATACCACCTGGTTCACAAAACCCAACTTCGGACAGGCAAAGCCACAGGGGCGTAATTCTTCCCAACCCAAGAGCCCTTGA ATGTTCTGGACTGCAATAAGGTATTTCGCGACGAAGCCAAAGCCGAAGATGAAGCCGATTGAGTTGAAAACTCCACCGGAGCAAACGCAGACGATCACTAGAGTTATATTCGACATCGTTAGGGAGCATGGTCCGCTAACCATAGCCGAAACTTGGGATCGCGTTCAGGAAGTGGGTTTGAGAGGATTAACAAGCAAAAGGCACATGAAAATAGTGATGAGATGGATGAGGGAACGGCAGAAGTTAAGACTGATGTGCAATCACGTAGGACCTAATAAGCAGTTTCTTTATACCACCTGGTTCACAAAACCCAACTTCGGACAGGCAAAGCCACAGGGGCGTAATTCTTCCCAACCCAAGAGCCCTTGA ATGTTCTGGACTGCAATAAGGTATTTCGCGACGAAGCCAAAGCCGAAGATGAAGCCGATTGAGTTGAAAACTCCACCGGAGCAAACGCAGACGATCACTAGAGTTATATTCGACATCGTTAGGGAGCATGGTCCGCTAACCATAGCCGAAACTTGGGATCGCGTTCAGGAAGTGGGTTTGAGAGGATTAACAAGCAAAAGGCACATGAAAATAGTGATGAGATGGATGAGGGAACGGCAGAAGTTAAGACTGATGTGCAATCACGTAGGACCTAATAAGCAGTTTCTTTATACCACCTGGTTCACAAAACCCAACTTCGGACAGGCAAAGCCACAGGGGCGTAATTCTTCCCAACCCAAGAGCCCTTGA MFWTAIRYFATKPKPKMKPIELKTPPEQTQTITRVIFDIVREHGPLTIAETWDRVQEVGLRGLTSKRHMKIVMRWMRERQKLRLMCNHVGPNKQFLYTTWFTKPNFGQAKPQGRNSSQPKSP
BLAST of Carg14161 vs. NCBI nr
Match: XP_022942849.1 (uncharacterized protein LOC111447756 [Cucurbita moschata] >XP_023527194.1 uncharacterized protein LOC111790503 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 255.8 bits (652), Expect = 7.6e-65 Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0
BLAST of Carg14161 vs. NCBI nr
Match: XP_022983421.1 (uncharacterized protein LOC111482027 [Cucurbita maxima]) HSP 1 Score: 254.6 bits (649), Expect = 1.7e-64 Identity = 121/122 (99.18%), Postives = 122/122 (100.00%), Query Frame = 0
BLAST of Carg14161 vs. NCBI nr
Match: XP_022136836.1 (uncharacterized protein LOC111008437 isoform X1 [Momordica charantia] >XP_022136837.1 uncharacterized protein LOC111008437 isoform X1 [Momordica charantia] >XP_022136838.1 uncharacterized protein LOC111008437 isoform X1 [Momordica charantia]) HSP 1 Score: 235.7 bits (600), Expect = 8.2e-59 Identity = 113/122 (92.62%), Postives = 117/122 (95.90%), Query Frame = 0
BLAST of Carg14161 vs. NCBI nr
Match: XP_022136839.1 (uncharacterized protein LOC111008437 isoform X2 [Momordica charantia]) HSP 1 Score: 229.2 bits (583), Expect = 7.6e-57 Identity = 112/122 (91.80%), Postives = 116/122 (95.08%), Query Frame = 0
BLAST of Carg14161 vs. NCBI nr
Match: XP_008452112.1 (PREDICTED: uncharacterized protein LOC103493216 [Cucumis melo]) HSP 1 Score: 227.3 bits (578), Expect = 2.9e-56 Identity = 111/122 (90.98%), Postives = 114/122 (93.44%), Query Frame = 0
BLAST of Carg14161 vs. TAIR10
Match: AT5G49410.1 (unknown protein) HSP 1 Score: 190.7 bits (483), Expect = 5.5e-49 Identity = 92/120 (76.67%), Postives = 106/120 (88.33%), Query Frame = 0
BLAST of Carg14161 vs. TAIR10
Match: AT1G73940.1 (unknown protein) HSP 1 Score: 87.4 bits (215), Expect = 6.5e-18 Identity = 36/93 (38.71%), Postives = 62/93 (66.67%), Query Frame = 0
BLAST of Carg14161 vs. TrEMBL
Match: tr|A0A1S3BSH8|A0A1S3BSH8_CUCME (uncharacterized protein LOC103493216 OS=Cucumis melo OX=3656 GN=LOC103493216 PE=4 SV=1) HSP 1 Score: 227.3 bits (578), Expect = 1.9e-56 Identity = 111/122 (90.98%), Postives = 114/122 (93.44%), Query Frame = 0
BLAST of Carg14161 vs. TrEMBL
Match: tr|A0A0A0KY02|A0A0A0KY02_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G045020 PE=4 SV=1) HSP 1 Score: 225.3 bits (573), Expect = 7.3e-56 Identity = 109/122 (89.34%), Postives = 113/122 (92.62%), Query Frame = 0
BLAST of Carg14161 vs. TrEMBL
Match: tr|A0A061EKV8|A0A061EKV8_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_017340 PE=4 SV=1) HSP 1 Score: 211.1 bits (536), Expect = 1.4e-51 Identity = 102/131 (77.86%), Postives = 114/131 (87.02%), Query Frame = 0
BLAST of Carg14161 vs. TrEMBL
Match: tr|A0A2P5DDX5|A0A2P5DDX5_PARAD (Thiamine-phosphate synthase OS=Parasponia andersonii OX=3476 GN=PanWU01x14_072930 PE=4 SV=1) HSP 1 Score: 210.3 bits (534), Expect = 2.4e-51 Identity = 105/124 (84.68%), Postives = 112/124 (90.32%), Query Frame = 0
BLAST of Carg14161 vs. TrEMBL
Match: tr|A0A2P5FP52|A0A2P5FP52_9ROSA (Thiamine-phosphate synthase OS=Trema orientalis OX=63057 GN=TorRG33x02_047360 PE=4 SV=1) HSP 1 Score: 208.8 bits (530), Expect = 7.1e-51 Identity = 104/124 (83.87%), Postives = 111/124 (89.52%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |