CSPI04G05290 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI04G05290
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Tumor necrosis factor receptor superfamily member 21
Location	Chr4 : 3615180 .. 3616902 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAGGGGGCCAAATTTCAAATATGCATCCAAACTCATTTTGCTCCCAATTTAATATTCATTTTATAATAACTTGAATCCCAGGCCCGAAGGTTACTACTGCGATACATTTTTTCAACGAACAGAGCATAGGGAAGGATTACTGGGGTTTGTTTTCTTCTCTGTCTGCTTTTGTTAGTAAAAAAGAAAAATTAAGATGTTTGGGACTGCAATAAGGTGTTTCGCGACGAAGCCAAAGCCCAAAATGAAACCGATAGAGCTTAAAACTCCACCGGAGCAAACCCAGACGATCACTAGAGCCATCTTCGACATTGTTAAGGAGCACGGTCCACTAACCATAGCCGAAACTTGGGACCGCGTTCAGGTAACAATGCTTTTTCTGTTTCCATTCCCTCATTTTTTAGCTTTCTCTTCAAATCTACGAATTACAAATTCCTTGTGTAACATCAATTATGTTAACACAGAAATTAGAATGATGGAATTATGTTAGATGCTTTGATTCTTTTAATTGGGGTTTAGTTGTGACCTATAGATAGAAATGAGAATTTCGGTTTGATTTCTTACTGAGTCCTGGTTAAATGAGAAATGCCGTATTCTCAACACTCATAAGGGCATAAACATTGGGGATCCTTGATTAAAATGCTTTTAGTTTTAAGTTGTTGGACTTGGAATGTATCTGGCAGGGCTCAGTAGGAGAGGTGATTTTCAGTTTTACCTCCTAGGAAATTTTAGAGGTGGCTAGAAGGCTCGGTGCATAATTTGGTGGCAGGGTAGTTTCTTTGCTTTTTTGTGGAGAATTTAGCTTGAGAAGAATTATTGGATTTTTAGAGAGGTAGAGAACCCTAAATTTGAGAGGTGGCTAGCTTTAACGCTTCCTTATGGGTGTCAATCACTGGATTATTTTTGTAATTATAACCTTGTCCTTTTATAATTGTATCATTTCTGAAGATAGAATCAGTTTTGCTCTTTCGTAATTGTTGTCCAGAAGGATTTAGATGTTGCATAACAGCTCAACTAGAGTGGGCAATGTCACAGCTCTAGATCCTTTTTATCCTGTAACTTTGTGCTGTTTTATTAGTTATCTATGTCGGTAAGTGGCGTTGTACTAAGTTGATAATTGTCTATTCTTTTCCTTTCCAGGAAGTTGGTTTGAGAGGATTAACAAGCAAAAGGCATATGAAAATAGTGATGAGATGGATGAGGGAACGACAGAAGATAAGATTAATGTGCAACCACGTAGGACCTCATAAGCAGTTTCTTTATACCACCTGGTTCACAAAACCCAACTTCGAACAGGCAAAGCAACTGCAGCGCAATGTTTCACAACCGAAAAGGCCTTGAATGCCTACAGGTTACCTGTAAAGAAGCTTTGTTTTCTTGTTTCTTTGTTTCTTTATTTCTTTATTTCTTTTTCATGGAAGTTGTTCTTTAGTTTTTCCACAAACGACAACTATATAGAACGAATGACCATAGGCAAGGATTTAAACACCGACCTTGTATAATTTTAGATCCTTAATCTTTTAGATAACAGATTGTATTGAGGGTCGTTAGTCAGTTGATACTCCTTTTGCCTTTGGTTCTCCCTAAAACATATATATTAGACTGTTTCCTAAAAGCCTTGCTGATGTGAAAATCCATTGTTTATTGACCGGTAAGTTATAATTAGATTCTTTTTATGAAACGATTAACAAACTTTTGTGTGTTGCTGAAGCAATTCCAATGCTC

mRNA sequence

ATGTTTGGGACTGCAATAAGGTGTTTCGCGACGAAGCCAAAGCCCAAAATGAAACCGATAGAGCTTAAAACTCCACCGGAGCAAACCCAGACGATCACTAGAGCCATCTTCGACATTGTTAAGGAGCACGGTCCACTAACCATAGCCGAAACTTGGGACCGCGTTCAGGAAGTTGGTTTGAGAGGATTAACAAGCAAAAGGCATATGAAAATAGTGATGAGATGGATGAGGGAACGACAGAAGATAAGATTAATGTGCAACCACGTAGGACCTCATAAGCAGTTTCTTTATACCACCTGGTTCACAAAACCCAACTTCGAACAGGCAAAGCAACTGCAGCGCAATGTTTCACAACCGAAAAGGCCTTGA

Coding sequence (CDS)

ATGTTTGGGACTGCAATAAGGTGTTTCGCGACGAAGCCAAAGCCCAAAATGAAACCGATAGAGCTTAAAACTCCACCGGAGCAAACCCAGACGATCACTAGAGCCATCTTCGACATTGTTAAGGAGCACGGTCCACTAACCATAGCCGAAACTTGGGACCGCGTTCAGGAAGTTGGTTTGAGAGGATTAACAAGCAAAAGGCATATGAAAATAGTGATGAGATGGATGAGGGAACGACAGAAGATAAGATTAATGTGCAACCACGTAGGACCTCATAAGCAGTTTCTTTATACCACCTGGTTCACAAAACCCAACTTCGAACAGGCAAAGCAACTGCAGCGCAATGTTTCACAACCGAAAAGGCCTTGA

Homology

[Close]

BLAST of CSPI04G05290 vs. TrEMBL
Match: A0A0A0KY02_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G045020 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 2.8e-65
Identity = 121/122 (99.18%), Postives = 122/122 (100.00%), Query Frame = 1


Query: 1   MFGTAIRCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGL 60
           MFGTA+RCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGL
Sbjct: 1   MFGTAVRCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGL 60

Query: 61  RGLTSKRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPNFEQAKQLQRNVSQPK 120
           RGLTSKRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPNFEQAKQLQRNVSQPK
Sbjct: 61  RGLTSKRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPNFEQAKQLQRNVSQPK 120

Query: 121 RP 123
           RP
Sbjct: 121 RP 122

[Close]

BLAST of CSPI04G05290 vs. TrEMBL
Match: M5W478_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015779mg PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 2.7e-52
Identity = 100/122 (81.97%), Postives = 108/122 (88.52%), Query Frame = 1


Query: 1   MFGTAIRCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGL 60
           MFGTAIRC A KPKP+MKPIELKTPPEQTQTITRAIFDIVKEHGPLTI ETWD V+EVGL
Sbjct: 1   MFGTAIRCIARKPKPQMKPIELKTPPEQTQTITRAIFDIVKEHGPLTITETWDHVKEVGL 60

Query: 61  RGLTSKRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPNFEQAKQLQRNVSQPK 120
           RGLTSKRHMKIV+RWMRERQK+RL+CNHVGP KQFLYTTWFTKPN +Q  +   +  QPK
Sbjct: 61  RGLTSKRHMKIVLRWMRERQKLRLICNHVGPQKQFLYTTWFTKPNLKQQGKPVNDSPQPK 120

Query: 121 RP 123
            P
Sbjct: 121 SP 122

[Close]

BLAST of CSPI04G05290 vs. TrEMBL
Match: U5GHM4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s12090g PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 7.8e-52
Identity = 101/121 (83.47%), Postives = 111/121 (91.74%), Query Frame = 1


Query: 1   MFGTAIRCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGL 60
           MF  AIR F+TKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETW++VQEVGL
Sbjct: 1   MFRAAIRYFSTKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWEKVQEVGL 60

Query: 61  RGLTSKRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPNFE-QAKQLQRNVSQP 120
           R LTSKRHMKIV+RWMRERQK++L+CNHVGPHKQFLYTTWFTKPNF+ QAK + +  S P
Sbjct: 61  RRLTSKRHMKIVLRWMRERQKLKLICNHVGPHKQFLYTTWFTKPNFKLQAKPVNKQPSLP 120

[Close]

BLAST of CSPI04G05290 vs. TrEMBL
Match: A0A061EKV8_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_017340 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 1.9e-50
Identity = 98/131 (74.81%), Postives = 111/131 (84.73%), Query Frame = 1


Query: 1   MFGTAIRCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGL 60
           MFG+AIR F+TKPKPKMKPIELKTPPEQTQTITR IFDI+KEHGPLT+ +TW+RV+EVGL
Sbjct: 1   MFGSAIRYFSTKPKPKMKPIELKTPPEQTQTITRVIFDILKEHGPLTVGDTWERVKEVGL 60

Query: 61  RGLTSKRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPNFEQAKQLQ------- 120
           RGLTSKRHMKIV+RWMRERQK+RL+CNHVGPHKQFLYTTWFTK N  QA+ ++       
Sbjct: 61  RGLTSKRHMKIVLRWMRERQKLRLICNHVGPHKQFLYTTWFTKSNIGQARPVKNSSATSL 120

Query: 121 --RNVSQPKRP 123
              N S PK P
Sbjct: 121 PVNNSSSPKSP 131

[Close]

BLAST of CSPI04G05290 vs. TrEMBL
Match: W9S3U6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_013253 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 7.3e-50
Identity = 99/122 (81.15%), Postives = 106/122 (86.89%), Query Frame = 1


Query: 1   MFGTAIRCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGL 60
           MF TAIR  A K KP+MKP+ELKTPPEQTQTITR IFDIVKEHGPLTIAETWD V+EVGL
Sbjct: 1   MFATAIRYMAKKGKPEMKPMELKTPPEQTQTITRVIFDIVKEHGPLTIAETWDHVKEVGL 60

Query: 61  RGLTSKRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPNFEQAKQLQRNVSQPK 120
           RGLTSKRHMKIV+RWMRERQK+RL+CNHVGPHKQFLYTTWFTKPN +QAK     V  P 
Sbjct: 61  RGLTSKRHMKIVLRWMRERQKLRLICNHVGPHKQFLYTTWFTKPNMKQAKP----VKAPP 118

Query: 121 RP 123
           RP
Sbjct: 121 RP 118

[Close]

BLAST of CSPI04G05290 vs. TAIR10
Match: AT5G49410.1 (AT5G49410.1 unknown protein)

HSP 1 Score: 192.2 bits (487), Expect = 1.9e-49
Identity = 88/103 (85.44%), Postives = 96/103 (93.20%), Query Frame = 1


Query: 3   GTAIRCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGLRG 62
           G   R FATKPKPKMKPIEL TPPEQTQTITR IFDI+K+HGPLTIAETWDRV+EVGLRG
Sbjct: 18  GMLTRHFATKPKPKMKPIELNTPPEQTQTITRVIFDILKDHGPLTIAETWDRVKEVGLRG 77

Query: 63  LTSKRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPN 106
           LTSKRHMKI++RWMRERQK++L+CNHVGPHKQFLYTTWFTK N
Sbjct: 78  LTSKRHMKIILRWMRERQKLKLICNHVGPHKQFLYTTWFTKHN 120

[Close]

BLAST of CSPI04G05290 vs. TAIR10
Match: AT1G73940.1 (AT1G73940.1 unknown protein)

HSP 1 Score: 85.9 bits (211), Expect = 1.9e-17
Identity = 38/103 (36.89%), Postives = 64/103 (62.14%), Query Frame = 1


Query: 6   IRCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGLRGLTS 65
           +R  + +    ++ I  K P ++   I+ +++D+ K HGPL++  TW R QE G+ GL S
Sbjct: 31  VRYMSRERAVNVRKINPKVPIQEAYAISNSLYDLFKLHGPLSVPNTWLRAQEAGVSGLNS 90

Query: 66  KRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPNFEQ 109
           K HMK++++WMR ++ ++L+CN VG  K+F +T     P  EQ
Sbjct: 91  KTHMKLLLKWMRGKKMLKLICNQVGSSKKFFHTVLPEDPLQEQ 133

[Close]

BLAST of CSPI04G05290 vs. NCBI nr
Match: gi|449457514|ref|XP_004146493.1| (PREDICTED: uncharacterized protein LOC101203168 [Cucumis sativus])

HSP 1 Score: 255.8 bits (652), Expect = 4.0e-65
Identity = 121/122 (99.18%), Postives = 122/122 (100.00%), Query Frame = 1


Query: 1   MFGTAIRCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGL 60
           MFGTA+RCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGL
Sbjct: 1   MFGTAVRCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGL 60

Query: 61  RGLTSKRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPNFEQAKQLQRNVSQPK 120
           RGLTSKRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPNFEQAKQLQRNVSQPK
Sbjct: 61  RGLTSKRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPNFEQAKQLQRNVSQPK 120

Query: 121 RP 123
           RP
Sbjct: 121 RP 122

[Close]

BLAST of CSPI04G05290 vs. NCBI nr
Match: gi|659102404|ref|XP_008452111.1| (PREDICTED: uncharacterized protein LOC103493216 [Cucumis melo])

HSP 1 Score: 250.8 bits (639), Expect = 1.3e-63
Identity = 120/122 (98.36%), Postives = 120/122 (98.36%), Query Frame = 1


Query: 1   MFGTAIRCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGL 60
           MF TAIRCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGL
Sbjct: 1   MFRTAIRCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGL 60

Query: 61  RGLTSKRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPNFEQAKQLQRNVSQPK 120
           RGLTSKRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPNFEQAKQLQRNVSQPK
Sbjct: 61  RGLTSKRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPNFEQAKQLQRNVSQPK 120

Query: 121 RP 123
            P
Sbjct: 121 SP 122

[Close]

BLAST of CSPI04G05290 vs. NCBI nr
Match: gi|645273151|ref|XP_008241740.1| (PREDICTED: uncharacterized protein LOC103340142 [Prunus mume])

HSP 1 Score: 214.2 bits (544), Expect = 1.3e-52
Identity = 101/122 (82.79%), Postives = 109/122 (89.34%), Query Frame = 1


Query: 1   MFGTAIRCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGL 60
           MFGTAIRC A KPKP+MKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWD V+EVGL
Sbjct: 16  MFGTAIRCIARKPKPQMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDHVKEVGL 75

Query: 61  RGLTSKRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPNFEQAKQLQRNVSQPK 120
           RGLTSKRHMKIV+RWMRERQK+RL+CNHVGP KQFLYTTWFTKPN +Q  +   +  QPK
Sbjct: 76  RGLTSKRHMKIVLRWMRERQKLRLICNHVGPQKQFLYTTWFTKPNLKQQGKPVNDSPQPK 135

Query: 121 RP 123
            P
Sbjct: 136 SP 137

[Close]

BLAST of CSPI04G05290 vs. NCBI nr
Match: gi|595809217|ref|XP_007202879.1| (hypothetical protein PRUPE_ppa015779mg [Prunus persica])

HSP 1 Score: 212.6 bits (540), Expect = 3.8e-52
Identity = 100/122 (81.97%), Postives = 108/122 (88.52%), Query Frame = 1


Query: 1   MFGTAIRCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGL 60
           MFGTAIRC A KPKP+MKPIELKTPPEQTQTITRAIFDIVKEHGPLTI ETWD V+EVGL
Sbjct: 1   MFGTAIRCIARKPKPQMKPIELKTPPEQTQTITRAIFDIVKEHGPLTITETWDHVKEVGL 60

Query: 61  RGLTSKRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPNFEQAKQLQRNVSQPK 120
           RGLTSKRHMKIV+RWMRERQK+RL+CNHVGP KQFLYTTWFTKPN +Q  +   +  QPK
Sbjct: 61  RGLTSKRHMKIVLRWMRERQKLRLICNHVGPQKQFLYTTWFTKPNLKQQGKPVNDSPQPK 120

Query: 121 RP 123
            P
Sbjct: 121 SP 122

[Close]

BLAST of CSPI04G05290 vs. NCBI nr
Match: gi|566170935|ref|XP_006383155.1| (hypothetical protein POPTR_0005s12090g [Populus trichocarpa])

HSP 1 Score: 211.1 bits (536), Expect = 1.1e-51
Identity = 101/121 (83.47%), Postives = 111/121 (91.74%), Query Frame = 1


Query: 1   MFGTAIRCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGL 60
           MF  AIR F+TKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETW++VQEVGL
Sbjct: 1   MFRAAIRYFSTKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWEKVQEVGL 60

Query: 61  RGLTSKRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPNFE-QAKQLQRNVSQP 120
           R LTSKRHMKIV+RWMRERQK++L+CNHVGPHKQFLYTTWFTKPNF+ QAK + +  S P
Sbjct: 61  RRLTSKRHMKIVLRWMRERQKLKLICNHVGPHKQFLYTTWFTKPNFKLQAKPVNKQPSLP 120

The following BLAST results are available for this feature:

BLAST of CSPI04G05290 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI04G05290 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KY02_CUCSA	2.8e-65	99.18	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G045020 PE=4 SV=1	[more]
M5W478_PRUPE	2.7e-52	81.97	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015779mg PE=4 SV=1	[more]
U5GHM4_POPTR	7.8e-52	83.47	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s12090g PE=4 SV=1	[more]
A0A061EKV8_THECC	1.9e-50	74.81	Uncharacterized protein OS=Theobroma cacao GN=TCM_017340 PE=4 SV=1	[more]
W9S3U6_9ROSA	7.3e-50	81.15	Uncharacterized protein OS=Morus notabilis GN=L484_013253 PE=4 SV=1	[more]

BLAST of CSPI04G05290 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G49410.1	1.9e-49	85.44	unknown protein	[more]
AT1G73940.1	1.9e-17	36.89	unknown protein	[more]

BLAST of CSPI04G05290 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449457514\|ref\|XP_004146493.1\|	4.0e-65	99.18	PREDICTED: uncharacterized protein LOC101203168 [Cucumis sativus]	[more]
gi\|659102404\|ref\|XP_008452111.1\|	1.3e-63	98.36	PREDICTED: uncharacterized protein LOC103493216 [Cucumis melo]	[more]
gi\|645273151\|ref\|XP_008241740.1\|	1.3e-52	82.79	PREDICTED: uncharacterized protein LOC103340142 [Prunus mume]	[more]
gi\|595809217\|ref\|XP_007202879.1\|	3.8e-52	81.97	hypothetical protein PRUPE_ppa015779mg [Prunus persica]	[more]
gi\|566170935\|ref\|XP_006383155.1\|	1.1e-51	83.47	hypothetical protein POPTR_0005s12090g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G05290.1	CSPI04G05290.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35110	FAMILY NOT NAMED	coord: 1..122 score: 1.3
None	No IPR available	PANTHER	PTHR35110:SF1	SUBFAMILY NOT NAMED	coord: 1..122 score: 1.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI04G05290	Cla014566	Watermelon (97103) v1	cpiwmB313
CSPI04G05290	Csa4G045020	Cucumber (Chinese Long) v2	cpicuB182
CSPI04G05290	MELO3C016404	Melon (DHL92) v3.5.1	cpimeB310
CSPI04G05290	ClCG07G008720	Watermelon (Charleston Gray)	cpiwcgB342
CSPI04G05290	MELO3C016404.2	Melon (DHL92) v3.6.1	cpimedB301
CSPI04G05290	CsaV3_4G005440	Cucumber (Chinese Long) v3	cpicucB213
CSPI04G05290	Cla97C07G135780	Watermelon (97103) v2	cpiwmbB332
CSPI04G05290	Bhi01G001877	Wax gourd	cpiwgoB378
CSPI04G05290	Cucsa.201060	Cucumber (Gy14) v1	cgycpiB319
CSPI04G05290	CsGy4G005190	Cucumber (Gy14) v2	cgybcpiB168

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI04G05290	Melon (DHL92) v3.6.1	cpimedB263
CSPI04G05290	Melon (DHL92) v3.6.1	cpimedB328
CSPI04G05290	Cucumber (Gy14) v2	cgybcpiB279
CSPI04G05290	Silver-seed gourd	carcpiB0444
CSPI04G05290	Silver-seed gourd	carcpiB0981
CSPI04G05290	Silver-seed gourd	carcpiB1057
CSPI04G05290	Cucumber (Chinese Long) v3	cpicucB208
CSPI04G05290	Cucumber (Chinese Long) v3	cpicucB211
CSPI04G05290	Cucumber (Chinese Long) v3	cpicucB242
CSPI04G05290	Watermelon (97103) v2	cpiwmbB275
CSPI04G05290	Watermelon (97103) v2	cpiwmbB318
CSPI04G05290	Wax gourd	cpiwgoB407
CSPI04G05290	Wax gourd	cpiwgoB428
CSPI04G05290	Wild cucumber (PI 183967)	cpicpiB109
CSPI04G05290	Wild cucumber (PI 183967)	cpicpiB163
CSPI04G05290	Cucumber (Gy14) v1	cgycpiB026
CSPI04G05290	Cucumber (Gy14) v1	cgycpiB505
CSPI04G05290	Cucurbita maxima (Rimu)	cmacpiB342
CSPI04G05290	Cucurbita maxima (Rimu)	cmacpiB675
CSPI04G05290	Cucurbita maxima (Rimu)	cmacpiB721
CSPI04G05290	Cucurbita maxima (Rimu)	cmacpiB881
CSPI04G05290	Cucurbita moschata (Rifu)	cmocpiB332
CSPI04G05290	Cucurbita moschata (Rifu)	cmocpiB666
CSPI04G05290	Cucurbita moschata (Rifu)	cmocpiB715
CSPI04G05290	Cucurbita moschata (Rifu)	cmocpiB861
CSPI04G05290	Cucumber (Chinese Long) v2	cpicuB201
CSPI04G05290	Melon (DHL92) v3.5.1	cpimeB267
CSPI04G05290	Melon (DHL92) v3.5.1	cpimeB338
CSPI04G05290	Watermelon (Charleston Gray)	cpiwcgB300
CSPI04G05290	Watermelon (97103) v1	cpiwmB335
CSPI04G05290	Cucurbita pepo (Zucchini)	cpecpiB114
CSPI04G05290	Cucurbita pepo (Zucchini)	cpecpiB223
CSPI04G05290	Cucurbita pepo (Zucchini)	cpecpiB397
CSPI04G05290	Bottle gourd (USVL1VR-Ls)	cpilsiB252
CSPI04G05290	Bottle gourd (USVL1VR-Ls)	cpilsiB303