Cucsa.196300 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGAGTGTGGCTTTGGGCTGGGCCTCGCTTAAGCCCAAAAAAaGATGCGTGGCGCGGGACAATGTGAAAGATGCTCAAACGGATGCATATAAAAGGGTAAAACTAGCGGCAATTCGAAAACAGATCAAAACGCGTGGTGAGGGAACACGTCGAAATTTGAAACTTAAAAGTTGCGTCTTACAGACTTGCACTCCCCAGTTTCGATTCATCATGGAAGAGACCGGATTTCATCCTGTAATTCTCTTATCTTCATTCAAGTTCAATTCATCGTTTGATTGTTCAAATAGTCTGCTACGTCTATGTTTTCCTTTCAATTTGGCGTTTATGTGTATAATTCACAGGATCTAATTCACGCCATTTTCAAGCTCGAGTGGAGCAGAAGATCACTTGGTTAGAACTTTGGATCACCCTCTCCTTCTGTCTATCTATCTGTTTTCAGTTCTTCGTTCTCTCTTTCCTGATCATTTCTTCATTTTCAGAGCGCGAGAAAAACGAGAATAATCCGGATGCTATGGATTGCGAGGTGGTTCCCTTTTCGTGAGTTTCTTGTGAAAATTTATTTTCAACTGCTATTGTTTGATATCTTTCGTGAAAATGTTTGTCATCGTTTTACGTTTTGATTTCACTGGCACCAGGTTTATCTTAGAATGCTCTTGGTACTTCTTGAGTTGATATGTAGTCTAGCGAATTTAACTAGAAATAAGTGATTATCTATTTTGTTGCAAATTTGGAGTAAGGCTTTTTCTCGACTAGACCAGTGGGGTTGATCTTCAGCGTACTTATCTTCGTCAGGTTGACGCTGGGGCTGGAACATCCAAGAAAAGCAGGCCGATGTCAGGTATCTTTAGTTTTtACTTCAACAACTTACTATTATTTCATTTTTAAATTACTGTTTCTCTTAGGAGTGTTATTTTCCATCGAGCCGCTGTTATTTGAATGATTACTGTCTACTGGGAGATGTAGAAACTATTTCTGACCTCGCTGTTTTAATTTTCCATGCAGCTAATGCAAATGCTCTTAAATTGAGCTCTAAACTTGTACAAATTTTTATCTCAGGTATCTGTGGTGAAACGTCAGATGGTTAGTTTAGTGTCTAATGTTTCCTTCTTCTTTTAGGTTAACTTTTCTATTTGTGCAGAGGCTGTGCAGCGCGCTGCAACAATTGCTGAAGCAGAAGGTATTAGCAGAATTGAACCCACTCATTTGGAGAGAGTTCTTCCGCAGTTACTACTGGATTTTTAA ATGGAGAGTGTGGCTTTGGGCTGGGCCTCGCTTAAGCCCAAAAAAAGATGCGTGGCGCGGGACAATGTGAAAGATGCTCAAACGGATGCATATAAAAGGGATCTAATTCACGCCATTTTCAAGCTCGAGTGGAGCAGAAGATCACTTGAGCGCGAGAAAAACGAGAATAATCCGGATGCTATGGATTGCGAGGTGGTTGACGCTGGGGCTGGAACATCCAAGAAAAGCAGGCCGATGTCAGCTAATGCAAATGCTCTTAAATTGAGCTCTAAACTTGTACAAATTTTTATCTCAGAGGCTGTGCAGCGCGCTGCAACAATTGCTGAAGCAGAAGGTATTAGCAGAATTGAACCCACTCATTTGGAGAGAGTTCTTCCGCAGTTACTACTGGATTTTTAA ATGGAGAGTGTGGCTTTGGGCTGGGCCTCGCTTAAGCCCAAAAAAaGATGCGTGGCGCGGGACAATGTGAAAGATGCTCAAACGGATGCATATAAAAGGGATCTAATTCACGCCATTTTCAAGCTCGAGTGGAGCAGAAGATCACTTGAGCGCGAGAAAAACGAGAATAATCCGGATGCTATGGATTGCGAGGTGGTTGACGCTGGGGCTGGAACATCCAAGAAAAGCAGGCCGATGTCAGCTAATGCAAATGCTCTTAAATTGAGCTCTAAACTTGTACAAATTTTTATCTCAGAGGCTGTGCAGCGCGCTGCAACAATTGCTGAAGCAGAAGGTATTAGCAGAATTGAACCCACTCATTTGGAGAGAGTTCTTCCGCAGTTACTACTGGATTTTTAA MESVALGWASLKPKKRCVARDNVKDAQTDAYKRDLIHAIFKLEWSRRSLEREKNENNPDAMDCEVVDAGAGTSKKSRPMSANANALKLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLLDF*
BLAST of Cucsa.196300 vs. Swiss-Prot
Match: CENPX_CHICK (Centromere protein X OS=Gallus gallus GN=STRA13 PE=1 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 6.9e-07 Identity = 25/51 (49.02%), Postives = 39/51 (76.47%), Query Frame = 1
BLAST of Cucsa.196300 vs. Swiss-Prot
Match: CENPX_BOVIN (Centromere protein X OS=Bos taurus GN=STRA13 PE=3 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 2.6e-06 Identity = 25/58 (43.10%), Postives = 41/58 (70.69%), Query Frame = 1
BLAST of Cucsa.196300 vs. TrEMBL
Match: A0A0A0LU58_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G002850 PE=4 SV=1) HSP 1 Score: 226.9 bits (577), Expect = 1.5e-56 Identity = 129/178 (72.47%), Postives = 129/178 (72.47%), Query Frame = 1
BLAST of Cucsa.196300 vs. TrEMBL
Match: A0A067K7I4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11379 PE=4 SV=1) HSP 1 Score: 148.7 bits (374), Expect = 5.1e-33 Identity = 77/108 (71.30%), Postives = 90/108 (83.33%), Query Frame = 1
BLAST of Cucsa.196300 vs. TrEMBL
Match: A0A067K7I4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11379 PE=4 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 2.2e-04 Identity = 25/38 (65.79%), Postives = 30/38 (78.95%), Query Frame = 1
HSP 2 Score: 137.9 bits (346), Expect = 9.1e-30 Identity = 72/108 (66.67%), Postives = 87/108 (80.56%), Query Frame = 1
BLAST of Cucsa.196300 vs. TrEMBL
Match: A0A067D3Z1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g033891mg PE=4 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 1.2e-29 Identity = 72/104 (69.23%), Postives = 87/104 (83.65%), Query Frame = 1
BLAST of Cucsa.196300 vs. TrEMBL
Match: V4TNJ1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022963mg PE=4 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 1.2e-29 Identity = 72/104 (69.23%), Postives = 87/104 (83.65%), Query Frame = 1
BLAST of Cucsa.196300 vs. TAIR10
Match: AT1G78790.1 (AT1G78790.1 unknown protein) HSP 1 Score: 119.4 bits (298), Expect = 1.7e-27 Identity = 63/104 (60.58%), Postives = 79/104 (75.96%), Query Frame = 1
BLAST of Cucsa.196300 vs. NCBI nr
Match: gi|700208420|gb|KGN63516.1| (hypothetical protein Csa_1G002850 [Cucumis sativus]) HSP 1 Score: 226.9 bits (577), Expect = 2.1e-56 Identity = 129/178 (72.47%), Postives = 129/178 (72.47%), Query Frame = 1
BLAST of Cucsa.196300 vs. NCBI nr
Match: gi|449440604|ref|XP_004138074.1| (PREDICTED: centromere protein X [Cucumis sativus]) HSP 1 Score: 187.6 bits (475), Expect = 1.4e-44 Identity = 98/99 (98.99%), Postives = 98/99 (98.99%), Query Frame = 1
BLAST of Cucsa.196300 vs. NCBI nr
Match: gi|659129022|ref|XP_008464489.1| (PREDICTED: centromere protein X isoform X2 [Cucumis melo]) HSP 1 Score: 179.1 bits (453), Expect = 5.1e-42 Identity = 96/99 (96.97%), Postives = 96/99 (96.97%), Query Frame = 1
BLAST of Cucsa.196300 vs. NCBI nr
Match: gi|659129020|ref|XP_008464488.1| (PREDICTED: centromere protein X isoform X1 [Cucumis melo]) HSP 1 Score: 166.8 bits (421), Expect = 2.6e-38 Identity = 92/100 (92.00%), Postives = 93/100 (93.00%), Query Frame = 1
BLAST of Cucsa.196300 vs. NCBI nr
Match: gi|643720739|gb|KDP31003.1| (hypothetical protein JCGZ_11379 [Jatropha curcas]) HSP 1 Score: 148.7 bits (374), Expect = 7.4e-33 Identity = 77/108 (71.30%), Postives = 90/108 (83.33%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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