Csa1G002850 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa1G002850
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Centromere protein X; contains IPR018552 (CENP-S complex, centromere protein X)
Location	Chr1 : 518756 .. 520101 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAGTGTGGCTTTGGGCTGGGCCTCGCTTAAGCCCAAAAAAAGATGCGTGGCGCGGGACAATGTGAAAGATGCTCAAACGGATGCATATAAAAGGGTAAAACTAGCGGCAATTCGAAAACAGATCAAAACGCGTGGTGAGGGAACACGTCGAAATTTGAAACTTAAAAGTTGCGTCTTACAGACTTGCACTCCCCAGTTTCGATTCATCATGGAAGAGACCGGATTTCATCCTGTAATTCTCTTATCTTCATTCAAGTTCAATTCATCGTTTGATTGTTCAAATAGTCTGCTACGTCTATGTTTTCCTTTCAATTTGGCGTTTATGTGTATAATTCACAGGATCTAATTCACGCCATTTTCAAGCTCGAGTGGAGCAGAAGATCACTTGGTTAGAACTTTGGATCACCCTCTCCTTCTGTCTATCTATCTGTTTTCAGTTCTTCGTTCTCTCTTTCCTGATCATTTCTTCATTTTCAGAGCGCGAGAAAAACGAGAATAATCCGGATGCTATGGATTGCGAGGTGGTTCCCTTTTCGTGAGTTTCTTGTGAAAATTTATTTTCAACTGCTATTGTTTGATATCTTTCGTGAAAATGTTTGTCATCGTTTTACGTTTTGATTTCACTGGCACCAGGTTTATCTTAGAATGCTCTTGGTACTTCTTGAGTTGATATGTAGTCTAGCGAATTTAACTAGAAATAAGTGATTATCTATTTTGTTGCAAATTTGGAGTAAGGCTTTTTCTCGACTAGACCAGTGGGGTTGATCTTCAGCGTACTTATCTTCGTCAGGTTGACGCTGGGGCTGGAACATCCAAGAAAAGCAGGCCGATGTCAGGTATCTTTAGTTTTTACTTCAACAACTTACTATTATTTCATTTTTAAATTACTGTTTCTCTTAGGAGTGTTATTTTCCATCGAGCCGCTGTTATTTGAATGATTACTGTCTACTGGGAGATGTAGAAACTATTTCTGACCTCGCTGTTTTAATTTTCCATGCAGCTAATGCAAATGCTCTTAAATTGAGCTCTAAACTTGTACAAATTTTTATCTCAGGTATCTGTGGTGAAACGTCAGATGGTTAGTTTAGTGTCTAATGTTTCCTTCTTCTTTTAGGTTAACTTTTCTATTTGTGCAGAGGCTGTGCAGCGCGCTGCAACAATTGCTGAAGCAGAAGGTATTAGCAGAATTGAACCCACTCATTTGGAGAGAGTTCTTCCGCAGTTACTACTGGATTTTTAAGGTAGCTTTCCGTTTACACATTGCAATGTAAGTTCTTGTTTTATAGAGTGATTATTTGGACTATATCCTTCATTAGTAAGTTAGCTAATATGATTGATGTC

mRNA sequence

ATGGAGAGTGTGGCTTTGGGCTGGGCCTCGCTTAAGCCCAAAAAAAGATGCGTGGCGCGGGACAATGTGAAAGATGCTCAAACGGATGCATATAAAAGGGTAAAACTAGCGGCAATTCGAAAACAGATCAAAACGCGTGGTGAGGGAACACGTCGAAATTTGAAACTTAAAAGTTGCGTCTTACAGACTTGCACTCCCCAGTTTCGATTCATCATGGAAGAGACCGGATTTCATCCTGATCTAATTCACGCCATTTTCAAGCTCGAGTGGAGCAGAAGATCACTTGAGCGCGAGAAAAACGAGAATAATCCGGATGCTATGGATTGCGAGGTTGACGCTGGGGCTGGAACATCCAAGAAAAGCAGGCCGATGTCAGCTAATGCAAATGCTCTTAAATTGAGCTCTAAACTTGTACAAATTTTTATCTCAGAGGCTGTGCAGCGCGCTGCAACAATTGCTGAAGCAGAAGGTATTAGCAGAATTGAACCCACTCATTTGGAGAGAGTTCTTCCGCAGTTACTACTGGATTTTTAA

Coding sequence (CDS)

ATGGAGAGTGTGGCTTTGGGCTGGGCCTCGCTTAAGCCCAAAAAAAGATGCGTGGCGCGGGACAATGTGAAAGATGCTCAAACGGATGCATATAAAAGGGTAAAACTAGCGGCAATTCGAAAACAGATCAAAACGCGTGGTGAGGGAACACGTCGAAATTTGAAACTTAAAAGTTGCGTCTTACAGACTTGCACTCCCCAGTTTCGATTCATCATGGAAGAGACCGGATTTCATCCTGATCTAATTCACGCCATTTTCAAGCTCGAGTGGAGCAGAAGATCACTTGAGCGCGAGAAAAACGAGAATAATCCGGATGCTATGGATTGCGAGGTTGACGCTGGGGCTGGAACATCCAAGAAAAGCAGGCCGATGTCAGCTAATGCAAATGCTCTTAAATTGAGCTCTAAACTTGTACAAATTTTTATCTCAGAGGCTGTGCAGCGCGCTGCAACAATTGCTGAAGCAGAAGGTATTAGCAGAATTGAACCCACTCATTTGGAGAGAGTTCTTCCGCAGTTACTACTGGATTTTTAA

Protein sequence

MESVALGWASLKPKKRCVARDNVKDAQTDAYKRVKLAAIRKQIKTRGEGTRRNLKLKSCVLQTCTPQFRFIMEETGFHPDLIHAIFKLEWSRRSLEREKNENNPDAMDCEVDAGAGTSKKSRPMSANANALKLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLLDF*

Homology

[Close]

BLAST of Csa1G002850 vs. Swiss-Prot
Match: CENPX_CHICK (Centromere protein X OS=Gallus gallus GN=STRA13 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 9.3e-07
Identity = 25/51 (49.02%), Postives = 37/51 (72.55%), Query Frame = 1


Query: 127 NANALKLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLLDF 178
           N +AL L ++L+++F+ EA  RAA  A+AE + +++  H+E+VLPQLLLDF
Sbjct: 29  NGDALLLMAELLKVFVREAAARAARQAQAEDLEKVDIEHVEKVLPQLLLDF 79

[Close]

BLAST of Csa1G002850 vs. Swiss-Prot
Match: CENPX_BOVIN (Centromere protein X OS=Bos taurus GN=STRA13 PE=3 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 3.5e-06
Identity = 25/58 (43.10%), Postives = 39/58 (67.24%), Query Frame = 1


Query: 120 KSRPMSANANALKLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLLDF 178
           K +    + +AL+L ++L++IF+ EA  R+   A+AEG++ ++   LE+VLPQLLLDF
Sbjct: 22  KDKKTKVSGDALQLVAELLKIFVVEAAIRSVRQAQAEGLAHVDVEQLEKVLPQLLLDF 79

[Close]

BLAST of Csa1G002850 vs. TrEMBL
Match: A0A0A0LU58_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G002850 PE=4 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 9.1e-94
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 1


Query: 1   MESVALGWASLKPKKRCVARDNVKDAQTDAYKRVKLAAIRKQIKTRGEGTRRNLKLKSCV 60
           MESVALGWASLKPKKRCVARDNVKDAQTDAYKRVKLAAIRKQIKTRGEGTRRNLKLKSCV
Sbjct: 1   MESVALGWASLKPKKRCVARDNVKDAQTDAYKRVKLAAIRKQIKTRGEGTRRNLKLKSCV 60

Query: 61  LQTCTPQFRFIMEETGFHPDLIHAIFKLEWSRRSLEREKNENNPDAMDCEVDAGAGTSKK 120
           LQTCTPQFRFIMEETGFHPDLIHAIFKLEWSRRSLEREKNENNPDAMDCEVDAGAGTSKK
Sbjct: 61  LQTCTPQFRFIMEETGFHPDLIHAIFKLEWSRRSLEREKNENNPDAMDCEVDAGAGTSKK 120

Query: 121 SRPMSANANALKLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLLDF 178
           SRPMSANANALKLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLLDF
Sbjct: 121 SRPMSANANALKLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLLDF 177

[Close]

BLAST of Csa1G002850 vs. TrEMBL
Match: A0A067K7I4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11379 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 4.8e-34
Identity = 79/106 (74.53%), Postives = 91/106 (85.85%), Query Frame = 1


Query: 72  MEETGFHPDLIHAIFKLEWSRRSLEREKNENNPDAMDCEVDAGAGTSKKSRPMSANANAL 131
           ME+  F PDL+HAIFKL WS+R+LEREKNE   DAMDCEV  G GTSKK RP SAN+NAL
Sbjct: 56  MEDDTFDPDLVHAIFKLVWSKRALEREKNEVT-DAMDCEV--GVGTSKKIRPTSANSNAL 115

Query: 132 KLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLLDF 178
           KLS +L+++FISEAVQRAATIAEAEG+ +IE THLER+LPQLLLDF
Sbjct: 116 KLSCELLRVFISEAVQRAATIAEAEGVEKIEATHLERILPQLLLDF 158

[Close]

BLAST of Csa1G002850 vs. TrEMBL
Match: A0A067K7I4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11379 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 7.2e-06
Identity = 28/39 (71.79%), Postives = 32/39 (82.05%), Query Frame = 1


Query: 72  MEETGFHPDLIHAIFKLEWSRRSLEREKNENNPDAMDCE 111
           ME+  F PDL+HAIFKL WS+R+LEREKNE   DAMDCE
Sbjct: 1   MEDDTFDPDLVHAIFKLVWSKRALEREKNEVT-DAMDCE 38

HSP 2 Score: 143.7 bits (361), Expect = 2.2e-31
Identity = 74/103 (71.84%), Postives = 88/103 (85.44%), Query Frame = 1


Query: 75  TGFHPDLIHAIFKLEWSRRSLEREKNENNPDAMDCEVDAGAGTSKKSRPMSANANALKLS 134
           T F PDLIHAIFKL WSR +LEREKNE   D ++CEV  GA TSKK+RP SANANALKLS
Sbjct: 80  TRFDPDLIHAIFKLVWSRTALEREKNEG-ADPLECEV--GAATSKKNRPTSANANALKLS 139

Query: 135 SKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLLDF 178
            +L+++F+ EAV+RAATIAEAEG+++IE THLER+LPQLLLDF
Sbjct: 140 CELLRVFVIEAVERAATIAEAEGVNKIEATHLERILPQLLLDF 179

[Close]

BLAST of Csa1G002850 vs. TrEMBL
Match: V4TNJ1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022963mg PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.1e-30
Identity = 75/108 (69.44%), Postives = 89/108 (82.41%), Query Frame = 1


Query: 73  EETGFHPDLIHAIFKLEWSRRSLEREKNENNPDAMDCEV---DAGAGTSKKSRPMSANAN 132
           +ET F  DLIHAIFK  W+RRSLERE+N    DAM+ E     AGAGTSKK+RP SANAN
Sbjct: 3   KETTFDSDLIHAIFKHIWTRRSLERERN-GGTDAMESEFLLDQAGAGTSKKNRPTSANAN 62

Query: 133 ALKLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLLDF 178
           ALKLS +L+++F++EAVQRAA IAEAEG+S+IE THLER+LPQLLLDF
Sbjct: 63  ALKLSCELLRVFVTEAVQRAAAIAEAEGVSKIEATHLERILPQLLLDF 109

[Close]

BLAST of Csa1G002850 vs. TrEMBL
Match: A0A067D3Z1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g033891mg PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.1e-30
Identity = 75/108 (69.44%), Postives = 89/108 (82.41%), Query Frame = 1


Query: 73  EETGFHPDLIHAIFKLEWSRRSLEREKNENNPDAMDCEV---DAGAGTSKKSRPMSANAN 132
           +ET F  DLIHAIFK  W+RRSLERE+N    DAM+ E     AGAGTSKK+RP SANAN
Sbjct: 3   KETTFDSDLIHAIFKHIWTRRSLERERN-GGTDAMESEFLLHQAGAGTSKKNRPTSANAN 62

Query: 133 ALKLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLLDF 178
           ALKLS +L+++F++EAVQRAA IAEAEG+S+IE THLER+LPQLLLDF
Sbjct: 63  ALKLSCELLRVFVTEAVQRAAAIAEAEGVSKIEATHLERILPQLLLDF 109

[Close]

BLAST of Csa1G002850 vs. TAIR10
Match: AT1G78790.1 (AT1G78790.1 unknown protein)

HSP 1 Score: 118.6 bits (296), Expect = 3.9e-27
Identity = 65/102 (63.73%), Postives = 77/102 (75.49%), Query Frame = 1


Query: 77  FHPDLIHAIFKLEWSRRSLEREKNENNPDAMDC-EVDAGAGTSKKSRPMSANANALKLSS 136
           F  DLIHAIFK  W+RR  ERE++    DA+D  E +   GT+KK+R  SANANALKLS 
Sbjct: 7   FDSDLIHAIFKHIWARRFRERERS----DAIDATEAEVALGTTKKNRLASANANALKLSC 66

Query: 137 KLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLLDF 178
           +L++ F+SEAVQRAA IAEAEG+ +IE THLER+LPQLLLDF
Sbjct: 67  ELLKSFVSEAVQRAAIIAEAEGMEKIEATHLERILPQLLLDF 104

[Close]

BLAST of Csa1G002850 vs. NCBI nr
Match: gi|700208420|gb|KGN63516.1| (hypothetical protein Csa_1G002850 [Cucumis sativus])

HSP 1 Score: 350.9 bits (899), Expect = 1.3e-93
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 1


Query: 1   MESVALGWASLKPKKRCVARDNVKDAQTDAYKRVKLAAIRKQIKTRGEGTRRNLKLKSCV 60
           MESVALGWASLKPKKRCVARDNVKDAQTDAYKRVKLAAIRKQIKTRGEGTRRNLKLKSCV
Sbjct: 1   MESVALGWASLKPKKRCVARDNVKDAQTDAYKRVKLAAIRKQIKTRGEGTRRNLKLKSCV 60

Query: 61  LQTCTPQFRFIMEETGFHPDLIHAIFKLEWSRRSLEREKNENNPDAMDCEVDAGAGTSKK 120
           LQTCTPQFRFIMEETGFHPDLIHAIFKLEWSRRSLEREKNENNPDAMDCEVDAGAGTSKK
Sbjct: 61  LQTCTPQFRFIMEETGFHPDLIHAIFKLEWSRRSLEREKNENNPDAMDCEVDAGAGTSKK 120

Query: 121 SRPMSANANALKLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLLDF 178
           SRPMSANANALKLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLLDF
Sbjct: 121 SRPMSANANALKLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLLDF 177

[Close]

BLAST of Csa1G002850 vs. NCBI nr
Match: gi|449440604|ref|XP_004138074.1| (PREDICTED: centromere protein X [Cucumis sativus])

HSP 1 Score: 210.3 bits (534), Expect = 2.8e-51
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 1


Query: 72  MEETGFHPDLIHAIFKLEWSRRSLEREKNENNPDAMDCEVDAGAGTSKKSRPMSANANAL 131
           MEETGFHPDLIHAIFKLEWSRRSLEREKNENNPDAMDCEVDAGAGTSKKSRPMSANANAL
Sbjct: 1   MEETGFHPDLIHAIFKLEWSRRSLEREKNENNPDAMDCEVDAGAGTSKKSRPMSANANAL 60

Query: 132 KLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLLDF 178
           KLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLLDF
Sbjct: 61  KLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLLDF 106

[Close]

BLAST of Csa1G002850 vs. NCBI nr
Match: gi|659129022|ref|XP_008464489.1| (PREDICTED: centromere protein X isoform X2 [Cucumis melo])

HSP 1 Score: 201.8 bits (512), Expect = 9.8e-49
Identity = 104/106 (98.11%), Postives = 104/106 (98.11%), Query Frame = 1


Query: 72  MEETGFHPDLIHAIFKLEWSRRSLEREKNENNPDAMDCEVDAGAGTSKKSRPMSANANAL 131
           MEETGFHPDLIHAIFKLEWSRRSLEREKNE NPDAMDCEVDAGAGTSKKSRPMSANANAL
Sbjct: 1   MEETGFHPDLIHAIFKLEWSRRSLEREKNE-NPDAMDCEVDAGAGTSKKSRPMSANANAL 60

Query: 132 KLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLLDF 178
           KLSSKLVQIFISEAVQRAATIAEAEGI RIEPTHLERVLPQLLLDF
Sbjct: 61  KLSSKLVQIFISEAVQRAATIAEAEGIGRIEPTHLERVLPQLLLDF 105

[Close]

BLAST of Csa1G002850 vs. NCBI nr
Match: gi|659129020|ref|XP_008464488.1| (PREDICTED: centromere protein X isoform X1 [Cucumis melo])

HSP 1 Score: 189.5 bits (480), Expect = 5.0e-45
Identity = 100/107 (93.46%), Postives = 101/107 (94.39%), Query Frame = 1


Query: 72  MEETGFHPDLIHAIFKLEWSRRSLEREKNENNPDAMDCEVDAGAGTSKKSRPMSANANAL 131
           MEETGFHPDLIHAIFKLEWSRRSLEREKNE NPDAMDCEVDAGAGTSKKSRPMSANANAL
Sbjct: 1   MEETGFHPDLIHAIFKLEWSRRSLEREKNE-NPDAMDCEVDAGAGTSKKSRPMSANANAL 60

Query: 132 KLSSKLVQIFI-SEAVQRAATIAEAEGISRIEPTHLERVLPQLLLDF 178
           KLSSKLV   I +EAVQRAATIAEAEGI RIEPTHLERVLPQLLLDF
Sbjct: 61  KLSSKLVNFSICAEAVQRAATIAEAEGIGRIEPTHLERVLPQLLLDF 106

[Close]

BLAST of Csa1G002850 vs. NCBI nr
Match: gi|643720739|gb|KDP31003.1| (hypothetical protein JCGZ_11379 [Jatropha curcas])

HSP 1 Score: 152.5 bits (384), Expect = 6.8e-34
Identity = 79/106 (74.53%), Postives = 91/106 (85.85%), Query Frame = 1


Query: 72  MEETGFHPDLIHAIFKLEWSRRSLEREKNENNPDAMDCEVDAGAGTSKKSRPMSANANAL 131
           ME+  F PDL+HAIFKL WS+R+LEREKNE   DAMDCEV  G GTSKK RP SAN+NAL
Sbjct: 56  MEDDTFDPDLVHAIFKLVWSKRALEREKNEVT-DAMDCEV--GVGTSKKIRPTSANSNAL 115

Query: 132 KLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLLDF 178
           KLS +L+++FISEAVQRAATIAEAEG+ +IE THLER+LPQLLLDF
Sbjct: 116 KLSCELLRVFISEAVQRAATIAEAEGVEKIEATHLERILPQLLLDF 158

The following BLAST results are available for this feature:

BLAST of Csa1G002850 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CENPX_CHICK	9.3e-07	49.02	Centromere protein X OS=Gallus gallus GN=STRA13 PE=1 SV=1	[more]
CENPX_BOVIN	3.5e-06	43.10	Centromere protein X OS=Bos taurus GN=STRA13 PE=3 SV=1	[more]

BLAST of Csa1G002850 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LU58_CUCSA	9.1e-94	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G002850 PE=4 SV=1	[more]
A0A067K7I4_JATCU	4.8e-34	74.53	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11379 PE=4 SV=1	[more]
A0A067K7I4_JATCU	7.2e-06	71.79	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11379 PE=4 SV=1	[more]
V4TNJ1_9ROSI	1.1e-30	69.44	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022963mg PE=4 SV=1	[more]
A0A067D3Z1_CITSI	1.1e-30	69.44	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g033891mg PE=4 SV=1	[more]

BLAST of Csa1G002850 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G78790.1	3.9e-27	63.73	unknown protein	[more]

BLAST of Csa1G002850 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700208420\|gb\|KGN63516.1\|	1.3e-93	100.00	hypothetical protein Csa_1G002850 [Cucumis sativus]	[more]
gi\|449440604\|ref\|XP_004138074.1\|	2.8e-51	100.00	PREDICTED: centromere protein X [Cucumis sativus]	[more]
gi\|659129022\|ref\|XP_008464489.1\|	9.8e-49	98.11	PREDICTED: centromere protein X isoform X2 [Cucumis melo]	[more]
gi\|659129020\|ref\|XP_008464488.1\|	5.0e-45	93.46	PREDICTED: centromere protein X isoform X1 [Cucumis melo]	[more]
gi\|643720739\|gb\|KDP31003.1\|	6.8e-34	74.53	hypothetical protein JCGZ_11379 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR018552	CENP-X

Vocabulary: **Biological Process**
Term	Definition
GO:0006281	DNA repair
GO:0051382	kinetochore assembly

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006281	DNA repair
biological_process	GO:0051382	kinetochore assembly
biological_process	GO:0006661	phosphatidylinositol biosynthetic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0046982	protein heterodimerization activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa1G002850.1	Csa1G002850.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018552	Centromere protein X	PFAM	PF09415	CENP-X	coord: 124..177 score: 3.6
None	No IPR available	PANTHER	PTHR28680	FAMILY NOT NAMED	coord: 66..90 score: 2.7E-29coord: 119..177 score: 2.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa1G002850	Cla019243	Watermelon (97103) v1	cuwmB094
Csa1G002850	ClCG06G017550	Watermelon (Charleston Gray)	cuwcgB081
Csa1G002850	Lsi06G016080	Bottle gourd (USVL1VR-Ls)	culsiB070
Csa1G002850	MELO3C026242.2	Melon (DHL92) v3.6.1	cumedB046
Csa1G002850	Cla97C06G127260	Watermelon (97103) v2	cuwmbB078
Csa1G002850	Bhi02G000439	Wax gourd	cuwgoB078
Csa1G002850	CSPI01G00850	Wild cucumber (PI 183967)	cpicuB000
Csa1G002850	Cucsa.196300	Cucumber (Gy14) v1	cgycuB299
Csa1G002850	CmoCh10G000820	Cucurbita moschata (Rifu)	cmocuB037
Csa1G002850	Cp4.1LG18g08910	Cucurbita pepo (Zucchini)	cpecuB361
Csa1G002850	CsGy1G000890	Cucumber (Gy14) v2	cgybcuB001
Csa1G002850	Carg10304	Silver-seed gourd	carcuB0391

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa1G002850	Cucumber (Chinese Long) v2	cucuB014
Csa1G002850	Cucurbita maxima (Rimu)	cmacuB048
Csa1G002850	Cucurbita maxima (Rimu)	cmacuB086
Csa1G002850	Cucurbita maxima (Rimu)	cmacuB113
Csa1G002850	Cucurbita maxima (Rimu)	cmacuB236
Csa1G002850	Cucurbita moschata (Rifu)	cmocuB076
Csa1G002850	Cucurbita moschata (Rifu)	cmocuB085
Csa1G002850	Cucurbita moschata (Rifu)	cmocuB223
Csa1G002850	Melon (DHL92) v3.5.1	cumeB054
Csa1G002850	Watermelon (Charleston Gray)	cuwcgB002
Csa1G002850	Watermelon (Charleston Gray)	cuwcgB065
Csa1G002850	Watermelon (97103) v1	cuwmB002
Csa1G002850	Cucurbita pepo (Zucchini)	cpecuB653
Csa1G002850	Cucumber (Gy14) v2	cgybcuB096
Csa1G002850	Silver-seed gourd	carcuB0394
Csa1G002850	Silver-seed gourd	carcuB1062
Csa1G002850	Watermelon (97103) v2	cuwmbB063
Csa1G002850	Watermelon (97103) v2	cuwmbB090
Csa1G002850	Wax gourd	cuwgoB007