Cucsa.179920 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.179920
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Reticulon-like protein
Location	scaffold01233 : 279839 .. 284361 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAAAGTGAAAGATAAAGTGAAGAAAAGGAAAAATTCAATCCGACCCACTTGAAGAACAGAAAAAAaGAGGGAATTTTTCATCTGGGTTGGTGGTGGCCCGCTTATAATTTCAGTATGTCAGCTTCTCCACGCCATTTCTTGTCGATATTTTTGGAATCCCATAACTCTTTCTTTCTCTCCTCGTTTTCTGTTCTTCTACCTCCCGTTTTTGTGTAATTCCGAACGGAAAATTTTCAGAACCCATTTTCATCTGTCTGTTTGCTTTCTTCTTCTTCAATTTCTTACTTGAAGACCCTTTAATTTCCTGCTCCTGGTTTGTTCTCTTCAGTACCATTTTAGATTTTGTTGGTTTCCTGCTTGTTTTGTGTTCACTTTCAGCTGATTTCGTCTTTTAATTTGCTTGCTTGATGCTTAAATGAGAATAAATGCTGCTAATTCTGCTTACCTTTGTGGTAGTTGTAGTTTTGCTCTCTCTTTTTGTTAACTTCTGCTGTTTATCTTACTATTCGACCAATTAATTTCTTGCACATAGCTTCATCTTTCCGTGTACCGTCTGTCATTTGAAGATTCTATTTATTTTTTTTtATCTTGTATTACTGCGGTTCAGTTCTTGGTTGAATCTGAAGTTTATAATGCTTAAATGAGGTTGGATTGCTTTGATTTTGACCATGTCTCTTCCTTCTAGGTGGGTTGAAACATCGACTGACTTCTGCTTTTGAGTTGAAAACGTTTTGCTAAAAATCGCGTTCCTTCCTATTTTATGACATTTCATTGTGTTTTGCCTTTCTGGCTTCCTTATGTTTCATGGTCAGTATTGATCAGCATTTTGTTTTGTCTCTAAATTCTTTTGTGCTTTTGAACGTCTGGTGTTTATTCTTCTGAAGCTTTTTCTAAGCTTTAGTTTCGAGTCATTTCTTTTAGGTAACTTTTGCTTTTTGTGAGCGTTTTACATCTATCTTTGCATTCTTTTATTTATTTATTTTTCTCAATGGAAGTTTGGTTATTCATTAGAAGAAAAaGAAAAAAACCTCTTCACGCCCCTTGTTTCCATAAATTTCATACAAGGCTTCTGTCAATCTCTGGTTGGCCTCAAAAATATCAAATTTCTGTCATTTTTTAGCACAATCAAGGTTTGGTAAGTTATAATATAGGTTTTGAAAGCTCTGCGGATTTTCATTATGCCTATGGAATCATACAGCCTTTCGCCTATTTTGGTGATTTCTACCTTATATGACCTCTTGTTGGAGTGCCTTCCACAAAAATATGTTGTGTAATCTTAATACTTTGATGATTAACATGGACGGTAGAAGTTAACTGTAATAATTTTCTGCCATTGGGACTCTTTCCTCCACCCCTGGTCTTCAGAGTTAGTAACCCTTTTGTTGGCTTGATATTTACCCCGTTAATTGAGCAAAAGTTAAATTCTGGAGCTAATTAGACTGGACCCTCTTCTTTGATCAACTTTCTTACTCACTCACACTCTTCAAATCTTATGTCCTCGTGATCAATTGTGAAAATTTCAGTGTTGGCTAAAACTCAGAATTCAGTAAATTTTtGTTTTTtATCTTGTTCTATCAGATTAAGTGGATTTTCCTTCTTTATTGTGCCTGCTTATACACTAAAGACTCCTTCTTCGTTTTCTTTTtCCTTTATGTATCTTTTTCTATACCTTTTAGTACCTGGCCCAACTTGTGTCTTTTCCTTGAATGTGATTCCATTAAACTCTTTCCCACTCTATATGCTCCTGGTACGAAAGATCTCTTGCTATTCTGATAGTTTGTTTCAAATCAATTTATAATTTTGATTTTGTTGTTGTTACCCAACATTTCGACTACATGCTCCCTTTTTTTtGTGGAAAACTAATTCCATTTGATGAAGAGATTTGTATGTGCCAAAATTTATAATCCCTCTTGGATGACGATCACCGAAATATCCAACCTGTTGCCTCCTTGCCTTGCTCTAAGAATTGTAGAAAGTGATGGCTCTTTTATGTTCTCTGTCACTTGGTTTCCTTCATAAACAAGATTTGGTGCTGAGAAAGCAAATTGAAAATGAAAACCTCAGCGGTATTTGGTGTTGGTTTGGACATGACATGTAATGGAACTAAGGAAATGCATTACCAGAAGGTGGATCTCCAGCCGAAACATCCTCCTAAAATTTGATCCTGGAGCTAAGACCTAGATTTGCTCCATTACCCATATGATGCCTCTCATATATCCTATTGACTATTATTTAAATTTGTTGTATTGTGTTCAACTTTTACTCTTTTACATAAGTATAGTTCGTACTTTGTGCTCGTTATGTTATCATAAATCTACCTTCTTGGTGAAGAACAGCCTGGTCCTTAACTTTAGCTCCCTTGTTGTTATTTCTTTTCTGAAGCACGAGAACGATGTCTGAGAAGATGACTGCTGAGGATTTTATTAATAACATTTCTGAAGTTCTTACTGAACATGGTCAAAAGGGAAAaTCAGTTTCATTTTTTGGGGAAGATAGCAAATCAAGTTCAGTGGCTGGTCAGATCAATCGGATATTTGGACGCCAAAAACCTGTTTACAATCTTCTTGGGGGTGGAAAATGTACATCCTTATTTATGTGTTCTTAGTCTTTTTTTCATCTTCTACAATCTTTTTTCACGTCACAGATCATATTACTTCATTTTGATTTCTATGCTGACCAAATATTTGTAGCTGCTGATGTGCTCCTATGGAGGAACAAGAAAATCTCAGCTAGTGTTTTGACTGGTGCAACTATTATATGGGTGCTTTTTGAATGGCTTAATTACCACTTCTTGACTCTTGTTTGCTTCGCTTTGGTTCTTGGTATGTTGGCTCAGTTTATGTGGACAAATGCGTCAGGATTTCTGAACAGGTGATTGAAAGTTGGATGTTTATGCCTTTGTTTTTCATTGACTTTGATGCTCTTTCTGGTTTAGCGTGCCTGTGCATTCTGTAATAGAATTTCATGCACTTGCAGATCATCGTCCAACGTTCCTCGCCTTGTTCTTCCCAAGGAACTATTTGTCAATATTGCCGTTACGTTTGGTGCTGAGGTTAACCGAGCTCTCTGTTATCTCCAAGATATTGCTTGTGAAGGAAATTTGAAACACTTCCTTGTGGTATGCTAACATATTTCATGTACTTGTTTTGCAATTCTGTTGTATTTCTAAATGTCCTTAGAACGACTTGCTCTAGACATTCATATTTGAGTATTTAGGTACAAGATGTTGAAATTTGATAAAAACAAGCATTGATTTTCTCTTATTGACTTTAAGCTCCTAGTTTGCCTTGCCTCTTGACTTAGGCGTTTTTTTtATTATAGCTCCAGGAACACCAAAACATGGGATATTTGAGAAATATGCTGCCTCAGTTTTGCAAGCGTCTGCTATATTGAATGGAGTTTCTTTGATTATAGCTCCTAGGAAACCTGTTAGATTGCTGTTTTtACTTTTTGATTTTCTTGTCGATACTTCTTTAATGTGAATGTATTTCCAGGCCGTAGTGAGCTTATGGGTTGGTGCTGTGATTAGTAGCTGGTGCAATTTCGTAACTGTCTTGTATATTGGTAAGTGTTTCAGATTCTGCTTTTCAAAACATTTACATCTTCAATTTCTTTGATGATATTATTTAGAAACCAGAAAAAAGATTTAGAGTGTGTTTGGATTGCCTTATATATTTGATTCAAATTGTGATGGCTACTTATAACTTCTTAAATTTTTtAaAAAACTTAATGTTGTAGGATCATATGATTGAGTGAAACTATTTTATGCCACATGGAAAGTATGGTACAGTTTACTGTTTAAAGTGTTTGAATTATTTTGCTTCTTTGTGGAAGGGACTTTAGCTATTTCATTTCATCACCTAATATAGGATGAGCTTTTTCCAATTATATGCCACATGGAAAGTATGGTACTCCACAATGATTGACTTCCGTGAGATTGTTGCGCTATGAAATTAGTTGAGAAGAATGTAAACTGTCTAAAAAAGAACAAAAAAGCATAACCGATGAAAGTGCTGAAATTATCTTGCTTTTTAGTCAGCCGCAACGAATCAAAGTCTGGATAGAAACTTTTTGGTCATGGGAGACTACTAACACATTTCAAATATGTTCAGGCTTTGTTGCGGCCCATACGCTTCCAATTCTGTACGAGAAATATGAAGATGAAGTCGACACCTTCGCATATAAGGTGTTCGATCAGCTTTGCGGCCACTACCAAAAGTTCGATTCAAGTGTCCTCAGCAAGATTCCCAGAGGAGCTTTCAAGGGAaaGAAGTATGAATAATAGATCATTTTCAACTGTCAACAATGCCTAAACCAGCCCTAGTTTTTGCATGGAATTGGTTGTATCATAAGATTTGGTAAAATATTATCTACCTCATGGTGAAATCATAGAGAGACCAAGTGGTAGAAATGAATCTTTAGTTTAAATTTGTATTTGCCAATTTGCTGAAATGGGAACCATCTTTAACTGATTCCTGCAGCTATTAACTTCCATTATTTTAACTGCTTCACATTCCTATC

mRNA sequence

GAAAAAGTGAAAGATAAAGTGAAGAAAAGGAAAAATTCAATCCGACCCACTTGAAGAACAGAAAAAAAGAGGGAATTTTTCATCTGGGTTGGTGGTGGCCCGCTTATAATTTCACACGAGAACGATGTCTGAGAAGATGACTGCTGAGGATTTTATTAATAACATTTCTGAAGTTCTTACTGAACATGGTCAAAAGGGAAAATCAGTTTCATTTTTTGGGGAAGATAGCAAATCAAGTTCAGTGGCTGGTCAGATCAATCGGATATTTGGACGCCAAAAACCTGTTTACAATCTTCTTGGGGGTGGAAAATCTGCTGATGTGCTCCTATGGAGGAACAAGAAAATCTCAGCTAGTGTTTTGACTGGTGCAACTATTATATGGGTGCTTTTTGAATGGCTTAATTACCACTTCTTGACTCTTGTTTGCTTCGCTTTGGTTCTTGGTATGTTGGCTCAGTTTATGTGGACAAATGCGTCAGGATTTCTGAACAGATCATCGTCCAACGTTCCTCGCCTTGTTCTTCCCAAGGAACTATTTGTCAATATTGCCGTTACGTTTGGTGCTGAGGTTAACCGAGCTCTCTGTTATCTCCAAGATATTGCTTGTGAAGGAAATTTGAAACACTTCCTTGTGGCCGTAGTGAGCTTATGGGTTGGTGCTGTGATTAGTAGCTGGTGCAATTTCGTAACTGTCTTGTATATTGGCTTTGTTGCGGCCCATACGCTTCCAATTCTGTACGAGAAATATGAAGATGAAGTCGACACCTTCGCATATAAGGTGTTCGATCAGCTTTGCGGCCACTACCAAAAGTTCGATTCAAGTGTCCTCAGCAAGATTCCCAGAGGAGCTTTCAAGGGAAAGAAGTATGAATAATAGATCATTTTCAACTGTCAACAATGCCTAAACCAGCCCTAGTTTTTGCATGGAATTGGTTGTATCATAAGATTTGGTAAAATATTATCTACCTCATGGTGAAATCATAGAGAGACCAAGTGGTAGAAATGAATCTTTAGTTTAAATTTGTATTTGCCAATTTGCTGAAATGGGAACCATCTTTAACTGATTCCTGCAGCTATTAACTTCCATTATTTTAACTGCTTCACATTCCTATC

Coding sequence (CDS)

ATGTCTGAGAAGATGACTGCTGAGGATTTTATTAATAACATTTCTGAAGTTCTTACTGAACATGGTCAAAAGGGAAAaTCAGTTTCATTTTTTGGGGAAGATAGCAAATCAAGTTCAGTGGCTGGTCAGATCAATCGGATATTTGGACGCCAAAAACCTGTTTACAATCTTCTTGGGGGTGGAAAATCTGCTGATGTGCTCCTATGGAGGAACAAGAAAATCTCAGCTAGTGTTTTGACTGGTGCAACTATTATATGGGTGCTTTTTGAATGGCTTAATTACCACTTCTTGACTCTTGTTTGCTTCGCTTTGGTTCTTGGTATGTTGGCTCAGTTTATGTGGACAAATGCGTCAGGATTTCTGAACAGATCATCGTCCAACGTTCCTCGCCTTGTTCTTCCCAAGGAACTATTTGTCAATATTGCCGTTACGTTTGGTGCTGAGGTTAACCGAGCTCTCTGTTATCTCCAAGATATTGCTTGTGAAGGAAATTTGAAACACTTCCTTGTGGCCGTAGTGAGCTTATGGGTTGGTGCTGTGATTAGTAGCTGGTGCAATTTCGTAACTGTCTTGTATATTGGCTTTGTTGCGGCCCATACGCTTCCAATTCTGTACGAGAAATATGAAGATGAAGTCGACACCTTCGCATATAAGGTGTTCGATCAGCTTTGCGGCCACTACCAAAAGTTCGATTCAAGTGTCCTCAGCAAGATTCCCAGAGGAGCTTTCAAGGGAaaGAAGTATGAATAA

Protein sequence

MSEKMTAEDFINNISEVLTEHGQKGKSVSFFGEDSKSSSVAGQINRIFGRQKPVYNLLGGGKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQFMWTNASGFLNRSSSNVPRLVLPKELFVNIAVTFGAEVNRALCYLQDIACEGNLKHFLVAVVSLWVGAVISSWCNFVTVLYIGFVAAHTLPILYEKYEDEVDTFAYKVFDQLCGHYQKFDSSVLSKIPRGAFKGKKYE*

Homology

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BLAST of Cucsa.179920 vs. Swiss-Prot
Match: RTNLH_ARATH (Reticulon-like protein B8 OS=Arabidopsis thaliana GN=RTNLB8 PE=2 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 1.2e-84
Identity = 152/249 (61.04%), Postives = 190/249 (76.31%), Query Frame = 1


Query: 1   MSEKMTAEDFINNISEVLTEHGQKGKSVSFFGEDSKSSSVAGQINRIFGRQKPVYNLLGG 60
           M +K   ED I ++ +  TE  QK K  S F E  +  SV+ + NR+F RQKP++++LGG
Sbjct: 1   MPDKNIVEDVIGDLVDNFTETVQKNKHGSSFFE--QEDSVSSRFNRLFDRQKPIHHVLGG 60

Query: 61  GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQFMWTNASGF 120
           GKSADVLLWRNKKISASVL GAT IWVLFEW+N+HFL+LVC+AL+LGM+AQF+W+NASGF
Sbjct: 61  GKSADVLLWRNKKISASVLMGATAIWVLFEWINFHFLSLVCYALLLGMIAQFVWSNASGF 120

Query: 121 LNRSSSNVPRLVLPKELFVNIAVTFGAEVNRALCYLQDIACEGNLKHFLVAVVSLWVGAV 180
           LNRS S VPRLVLPK+ F  + V  G EVNR L +LQD+AC+GNLK FL+AV+ LWV A+
Sbjct: 121 LNRSQSRVPRLVLPKDFFAEVGVAVGKEVNRGLLFLQDLACKGNLKQFLMAVIGLWVAAM 180

Query: 181 ISSWCNFVTVLYIGFVAAHTLPILYEKYEDEVDTFAYKVFDQLCGHYQKFDSSVLSKIPR 240
           + S CNF+TVLYIGFV AHT+P+LYE+YEDEVD F   +  +   HY+K D+  LS+IP 
Sbjct: 181 VGSCCNFLTVLYIGFVGAHTMPVLYERYEDEVDGFMDSMIMKFHSHYKKLDTGFLSRIPS 240

Query: 241 GAFKGKKYE 250
           G F  KK E
Sbjct: 241 GKFGLKKRE 247

[Close]

BLAST of Cucsa.179920 vs. Swiss-Prot
Match: RTNLE_ARATH (Reticulon-like protein B5 OS=Arabidopsis thaliana GN=RTNLB5 PE=1 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 1.5e-55
Identity = 107/241 (44.40%), Postives = 155/241 (64.32%), Query Frame = 1


Query: 6   TAEDFINNISEVLTEHGQKGKSVSFFGEDSKSSSVAGQINRIFGRQKPVYNLLGGGKSAD 65
           T E  +  ISE +  H     S S + +    S+V  +I R+FGR+KPV+ +LGGGK AD
Sbjct: 11  TEESLMEKISEKIHHHDSSSSSESEYEKPDSPSAVKAKIYRMFGREKPVHKVLGGGKPAD 70

Query: 66  VLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQFMWTNASGFLNRSS 125
           V LWR+KK+S +VL  AT IWVLFE + YH L+L+C   +L +   F+W+NA   +N++S
Sbjct: 71  VFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFLWSNAHTLINKTS 130

Query: 126 SNVPRLVLPKELFVNIAVTFGAEVNRALCYLQDIACEGNLKHFLVAVVSLWVGAVISSWC 185
             +P + +P+E F+ +A +   E+N+A   L+ IA   +LK FL+ VV LW+ +V+ +W 
Sbjct: 131 PQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVVGLWIISVVGNWF 190

Query: 186 NFVTVLYIGFVAAHTLPILYEKYEDEVDTFAYKVFDQLCGHYQKFDSSVLSKIPRGAFKG 245
           NF+T++YI FV  HT+P+LYEK+ED+VD  A K   +L   Y  FD  VLSKIP  + K 
Sbjct: 191 NFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVVFDEKVLSKIPIASLKA 250

Query: 246 K 247
           K
Sbjct: 251 K 251

[Close]

BLAST of Cucsa.179920 vs. Swiss-Prot
Match: RTNLF_ARATH (Reticulon-like protein B6 OS=Arabidopsis thaliana GN=RTNLB6 PE=1 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 1.1e-53
Identity = 104/239 (43.51%), Postives = 152/239 (63.60%), Query Frame = 1


Query: 8   EDFINNISEVLTEHGQKGKSVSFFGEDSKSSSVAGQINRIFGRQKPVYNLLGGGKSADVL 67
           E  +  I++ + +H     S S   +    S++  +I R+FGR+KPV+ +LGGG  ADV 
Sbjct: 13  ESLMEKIADKIHDHDSSSSSDSEHEKPESPSALKAKIYRLFGREKPVHKVLGGGLPADVF 72

Query: 68  LWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQFMWTNASGFLNRSSSN 127
           LWR+KK+SASVL  AT IWVLFE + YHFL+LVC  L+  + A F+ +NA  F+N++   
Sbjct: 73  LWRDKKLSASVLGVATAIWVLFELVEYHFLSLVCHILIFALAALFLLSNAHAFMNKTPPK 132

Query: 128 VPRLVLPKELFVNIAVTFGAEVNRALCYLQDIACEGNLKHFLVAVVSLWVGAVISSWCNF 187
           +P + + +E F+ I      E+N+A   L+ IA   +LK FL+ V  LW+ +V+ +W NF
Sbjct: 133 IPEIHIKEEHFLMIVSALRNELNQAFVILRSIALGRDLKKFLMVVFGLWIISVVGNWFNF 192

Query: 188 VTVLYIGFVAAHTLPILYEKYEDEVDTFAYKVFDQLCGHYQKFDSSVLSKIPRGAFKGK 247
           +T++YI FV  HT+P+LYEK+ED+VD  A K   +L  HY  FD  VLSK+P  + K K
Sbjct: 193 LTLVYICFVVLHTVPMLYEKHEDKVDPVAEKTLKELKKHYMVFDEKVLSKLPVASLKAK 251

[Close]

BLAST of Cucsa.179920 vs. Swiss-Prot
Match: RTNLC_ARATH (Reticulon-like protein B3 OS=Arabidopsis thaliana GN=RTNLB3 PE=2 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 1.0e-51
Identity = 100/240 (41.67%), Postives = 151/240 (62.92%), Query Frame = 1


Query: 8   EDFINNISEVLTEHGQKGKSVSFFGEDSKSSSVAGQINRIFGRQKPVYNLLGGGKSADVL 67
           E  +  ISE +  H     S S   +D  S+S+  +I R+FGR++P++ L GGGK AD+ 
Sbjct: 9   ESIMEKISEKIHGHDDSSSSSSDSDDDKNSASLKTKIYRLFGREQPLHKLFGGGKPADIF 68

Query: 68  LWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQFMWTNASGFLNRSSSN 127
           LWRNKK+S  VL  AT+ W+LFE L Y+ LTL     +L +   F+W++AS F+++S  +
Sbjct: 69  LWRNKKVSGGVLGAATVSWILFELLEYNLLTLFGHISILALAVLFLWSSASTFIHKSPLH 128

Query: 128 VPRLVLPKELFVNIAVTFGAEVNRALCYLQDIACEGNLKHFLVAVVSLWVGAVISSWCNF 187
           +P + +P+++ + +A     E+NR    L+DIA   +LK FL+ +  LWV + + S CNF
Sbjct: 129 IPEVHIPEDVVLQLASGLRIEINRGFTVLRDIASGRDLKKFLLVIAGLWVLSKVGSSCNF 188

Query: 188 VTVLYIGFVAAHTLPILYEKYEDEVDTFAYKVFDQLCGHYQKFD----SSVLSKIPRGAF 244
           +T++YI  V   T+P+LYEKYED+VD F  K   ++   Y +FD    S V+SKIP+GAF
Sbjct: 189 LTLIYIATVLLFTIPVLYEKYEDKVDDFGEKAMREIKKQYVEFDVKVLSKVMSKIPKGAF 248

[Close]

BLAST of Cucsa.179920 vs. Swiss-Prot
Match: RTNLA_ARATH (Reticulon-like protein B1 OS=Arabidopsis thaliana GN=RTNLB1 PE=1 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 2.5e-50
Identity = 101/256 (39.45%), Postives = 152/256 (59.38%), Query Frame = 1


Query: 3   EKMTAEDFINNISEVLTEHGQKGKSVSFFGED-----------SKSSSVAGQINRIFGRQ 62
           E +  E  ++ ISE +  HG    S S   +D           S SSS+  ++ R+FGR+
Sbjct: 19  EVVERESLMDKISEKI-HHGGDSSSSSSSSDDEDEKKKTKKPSSPSSSMKSKVYRLFGRE 78

Query: 63  KPVYNLLGGGKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQ 122
           +PV+ +LGGGK AD+ +W+NKK+S  VL GAT  WV+FE + YH LTL+C  +++ +   
Sbjct: 79  QPVHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMIVVLAVL 138

Query: 123 FMWTNASGFLNRSSSNVPRLVLPKELFVNIAVTFGAEVNRALCYLQDIACEGNLKHFLVA 182
           F+W+NA+ F+N+S   +P + +P+E  + +A     E+NR    L++IA   +LK FL+A
Sbjct: 139 FLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLKKFLIA 198

Query: 183 VVSLWVGAVISSWCNFVTVLYIGFVAAHTLPILYEKYEDEVDTFAYKVFDQLCGHYQKFD 242
           +  LWV +++    NF+T+ YI  V   T+P+ Y+KYED+VD    K   +L   Y   D
Sbjct: 199 IAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKKQYAVLD 258

Query: 243 SSVLSKIPRGAFKGKK 248
             VLSKIP G  K KK
Sbjct: 259 EKVLSKIPLGPLKNKK 273

[Close]

BLAST of Cucsa.179920 vs. TrEMBL
Match: A0A0A0KXG6_CUCSA (Reticulon-like protein OS=Cucumis sativus GN=Csa_4G063430 PE=4 SV=1)

HSP 1 Score: 504.2 bits (1297), Expect = 9.0e-140
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 1


Query: 1   MSEKMTAEDFINNISEVLTEHGQKGKSVSFFGEDSKSSSVAGQINRIFGRQKPVYNLLGG 60
           MSEKMTAEDFINNISEVLTEHGQKGKSVSFFGEDSKSSSVAGQINRIFGRQKPVYNLLGG
Sbjct: 1   MSEKMTAEDFINNISEVLTEHGQKGKSVSFFGEDSKSSSVAGQINRIFGRQKPVYNLLGG 60

Query: 61  GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQFMWTNASGF 120
           GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQFMWTNASGF
Sbjct: 61  GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQFMWTNASGF 120

Query: 121 LNRSSSNVPRLVLPKELFVNIAVTFGAEVNRALCYLQDIACEGNLKHFLVAVVSLWVGAV 180
           LNRSSSNVPRLVLPKELFVNIAVTFGAEVNRALCYLQDIACEGNLKHFLVAVVSLWVGAV
Sbjct: 121 LNRSSSNVPRLVLPKELFVNIAVTFGAEVNRALCYLQDIACEGNLKHFLVAVVSLWVGAV 180

Query: 181 ISSWCNFVTVLYIGFVAAHTLPILYEKYEDEVDTFAYKVFDQLCGHYQKFDSSVLSKIPR 240
           ISSWCNFVTVLYIGFVAAHTLPILYEKYEDEVDTFAYKVFDQLCGHYQKFDSSVLSKIPR
Sbjct: 181 ISSWCNFVTVLYIGFVAAHTLPILYEKYEDEVDTFAYKVFDQLCGHYQKFDSSVLSKIPR 240

Query: 241 GAFKGKKYE 250
           GAFKGKKYE
Sbjct: 241 GAFKGKKYE 249

[Close]

BLAST of Cucsa.179920 vs. TrEMBL
Match: B9S6H1_RICCO (Reticulon-like protein OS=Ricinus communis GN=RCOM_0536570 PE=4 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 5.5e-97
Identity = 175/249 (70.28%), Postives = 206/249 (82.73%), Query Frame = 1


Query: 1   MSEKMTAEDFINNISEVLTEHGQKGKSVSFFGEDSKSSSVAGQINRIFGRQKPVYNLLGG 60
           M+EK TAE F+NN+ EVL +   K KSVSFF E++  SSV  + +R+FGRQKPV++LLGG
Sbjct: 1   MAEKKTAEKFLNNLVEVLADSVPKQKSVSFFEEET--SSVTARFHRLFGRQKPVHHLLGG 60

Query: 61  GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQFMWTNASGF 120
           GKSADVLLWRNKKISASVLTGAT IW+LFEWLNYHFLTLVC ALVLGMLAQF+WTNASG 
Sbjct: 61  GKSADVLLWRNKKISASVLTGATAIWILFEWLNYHFLTLVCLALVLGMLAQFVWTNASGL 120

Query: 121 LNRSSSNVPRLVLPKELFVNIAVTFGAEVNRALCYLQDIACEGNLKHFLVAVVSLWVGAV 180
           +NRS   VPRLVLP E+FV+I  + G E+N AL +LQD++C GNLK FLV V SLW  AV
Sbjct: 121 VNRSPPKVPRLVLPDEVFVSIGRSVGVEINHALQFLQDVSCGGNLKQFLVVVASLWASAV 180

Query: 181 ISSWCNFVTVLYIGFVAAHTLPILYEKYEDEVDTFAYKVFDQLCGHYQKFDSSVLSKIPR 240
           I SWCNF+TVLY GFVAAHTLP+LYE+YED+VD F YKV +QL GHY+K D+ +LSKIP+
Sbjct: 181 IGSWCNFLTVLYTGFVAAHTLPVLYERYEDQVDDFVYKVLEQLQGHYRKLDTGLLSKIPK 240

Query: 241 GAFKGKKYE 250
           G  KGKK+E
Sbjct: 241 GNLKGKKHE 247

[Close]

BLAST of Cucsa.179920 vs. TrEMBL
Match: A0A0B0PZ43_GOSAR (Reticulon-like protein OS=Gossypium arboreum GN=F383_14573 PE=4 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 7.2e-97
Identity = 173/249 (69.48%), Postives = 205/249 (82.33%), Query Frame = 1


Query: 1   MSEKMTAEDFINNISEVLTEHGQKGKSVSFFGEDSKSSSVAGQINRIFGRQKPVYNLLGG 60
           M EK+T ED  NN+ E + +   K KSVSFF E+ KS+SV    NR+FGRQ+PV+++LGG
Sbjct: 1   MPEKITTEDLFNNLVETIADGVSKQKSVSFF-EEEKSNSVVSGFNRLFGRQRPVHHILGG 60

Query: 61  GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQFMWTNASGF 120
           GKSADVLLWRNKKISAS L  AT+IWVLFEWLNYHFLTL+CFALVLGMLAQF+W+NASG 
Sbjct: 61  GKSADVLLWRNKKISASFLASATLIWVLFEWLNYHFLTLLCFALVLGMLAQFVWSNASGL 120

Query: 121 LNRSSSNVPRLVLPKELFVNIAVTFGAEVNRALCYLQDIACEGNLKHFLVAVVSLWVGAV 180
           LNRSSS VPRLVLP ELFV+I  + GAEVNR L YLQD+AC+GNLK FLV  VSLWV AV
Sbjct: 121 LNRSSSQVPRLVLPDELFVSIGRSVGAEVNRGLQYLQDVACQGNLKQFLVVAVSLWVAAV 180

Query: 181 ISSWCNFVTVLYIGFVAAHTLPILYEKYEDEVDTFAYKVFDQLCGHYQKFDSSVLSKIPR 240
           + SWCNF+TVLYIGFVAAHTLP+LYE+Y++++D F Y + DQ   HY+K DS VLSKIP+
Sbjct: 181 VGSWCNFLTVLYIGFVAAHTLPVLYERYDEQIDGFVYNMLDQFQNHYKKLDSGVLSKIPK 240

Query: 241 GAFKGKKYE 250
           G FK KK++
Sbjct: 241 GKFKLKKHD 248

[Close]

BLAST of Cucsa.179920 vs. TrEMBL
Match: V7B9A0_PHAVU (Reticulon-like protein OS=Phaseolus vulgaris GN=PHAVU_008G196600g PE=4 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 6.1e-96
Identity = 173/249 (69.48%), Postives = 203/249 (81.53%), Query Frame = 1


Query: 1   MSEKMTAEDFINNISEVLTEHGQKGKSVSFFGEDSKSSSVAGQINRIFGRQKPVYNLLGG 60
           MSEKMTAE+ +N + E + E   K KS SFF ED KSSSV+ Q+NR+FGRQKPV+++LGG
Sbjct: 1   MSEKMTAENLLNTLVETIAE---KQKSGSFF-EDEKSSSVSSQLNRLFGRQKPVHHILGG 60

Query: 61  GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQFMWTNASGF 120
           GKSADVLLWRNKKISASVL+ AT IWVLFEWLNY+FLTL+ F L LGML QF+WTNAS  
Sbjct: 61  GKSADVLLWRNKKISASVLSAATAIWVLFEWLNYNFLTLLFFVLALGMLGQFLWTNASSL 120

Query: 121 LNRSSSNVPRLVLPKELFVNIAVTFGAEVNRALCYLQDIACEGNLKHFLVAVVSLWVGAV 180
            +R  S VPR  LP + FVNIA   GAEVNR L +LQD++C GNLK FL+AV+SLW GAV
Sbjct: 121 FSRKPSKVPRFALPDDFFVNIATAVGAEVNRGLRFLQDVSCGGNLKRFLIAVLSLWAGAV 180

Query: 181 ISSWCNFVTVLYIGFVAAHTLPILYEKYEDEVDTFAYKVFDQLCGHYQKFDSSVLSKIPR 240
           I SWCNF+TV+YIGFVAAHTLP+LYE+YED++D F YKVFDQ+  HYQK DS +LSKIP+
Sbjct: 181 IGSWCNFLTVMYIGFVAAHTLPVLYERYEDQIDIFVYKVFDQMQNHYQKLDSGLLSKIPK 240

Query: 241 GAFKGKKYE 250
           G  KGKKYE
Sbjct: 241 GKLKGKKYE 245

[Close]

BLAST of Cucsa.179920 vs. TrEMBL
Match: E0CU01_VITVI (Reticulon-like protein OS=Vitis vinifera GN=VIT_12s0028g01090 PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 1.0e-95
Identity = 168/249 (67.47%), Postives = 207/249 (83.13%), Query Frame = 1


Query: 1   MSEKMTAEDFINNISEVLTEHGQKGKSVSFFGEDSKSSSVAGQINRIFGRQKPVYNLLGG 60
           M E +TAE  +NNI E ++++ QK KSVSFF E+ KS+SV  Q  R+FGR+KPVYNLLG 
Sbjct: 1   MPEGITAEKLLNNIMETISDNAQKKKSVSFF-EEEKSNSVTSQFKRLFGREKPVYNLLGA 60

Query: 61  GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQFMWTNASGF 120
           GKSAD++LWRNKKISAS +TGAT+IWVLFEWLNYHFLTL+CFA+VLGM+AQF+W+NASG 
Sbjct: 61  GKSADLMLWRNKKISASFITGATLIWVLFEWLNYHFLTLLCFAVVLGMIAQFVWSNASGV 120

Query: 121 LNRSSSNVPRLVLPKELFVNIAVTFGAEVNRALCYLQDIACEGNLKHFLVAVVSLWVGAV 180
            +RSSS VPR+VLP ELF NI V  G ++N+AL +LQD+AC GNLK FL+ VVSLW  AV
Sbjct: 121 FSRSSSEVPRIVLPDELFQNIGVAVGVQINQALGFLQDVACGGNLKQFLLVVVSLWAAAV 180

Query: 181 ISSWCNFVTVLYIGFVAAHTLPILYEKYEDEVDTFAYKVFDQLCGHYQKFDSSVLSKIPR 240
           I SWCNF+TVLY+GF+AAHTLP+LYE+YED+VD F Y+V  QL  +Y+K DS  LSKIP+
Sbjct: 181 IGSWCNFLTVLYVGFIAAHTLPVLYERYEDQVDGFVYQVLGQLQHNYRKLDSGFLSKIPK 240

Query: 241 GAFKGKKYE 250
           G+ KGKK+E
Sbjct: 241 GSLKGKKHE 248

[Close]

BLAST of Cucsa.179920 vs. TAIR10
Match: AT3G10260.3 (AT3G10260.3 Reticulon family protein)

HSP 1 Score: 314.3 bits (804), Expect = 6.7e-86
Identity = 152/249 (61.04%), Postives = 190/249 (76.31%), Query Frame = 1


Query: 1   MSEKMTAEDFINNISEVLTEHGQKGKSVSFFGEDSKSSSVAGQINRIFGRQKPVYNLLGG 60
           M +K   ED I ++ +  TE  QK K  S F E  +  SV+ + NR+F RQKP++++LGG
Sbjct: 21  MPDKNIVEDVIGDLVDNFTETVQKNKHGSSFFE--QEDSVSSRFNRLFDRQKPIHHVLGG 80

Query: 61  GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQFMWTNASGF 120
           GKSADVLLWRNKKISASVL GAT IWVLFEW+N+HFL+LVC+AL+LGM+AQF+W+NASGF
Sbjct: 81  GKSADVLLWRNKKISASVLMGATAIWVLFEWINFHFLSLVCYALLLGMIAQFVWSNASGF 140

Query: 121 LNRSSSNVPRLVLPKELFVNIAVTFGAEVNRALCYLQDIACEGNLKHFLVAVVSLWVGAV 180
           LNRS S VPRLVLPK+ F  + V  G EVNR L +LQD+AC+GNLK FL+AV+ LWV A+
Sbjct: 141 LNRSQSRVPRLVLPKDFFAEVGVAVGKEVNRGLLFLQDLACKGNLKQFLMAVIGLWVAAM 200

Query: 181 ISSWCNFVTVLYIGFVAAHTLPILYEKYEDEVDTFAYKVFDQLCGHYQKFDSSVLSKIPR 240
           + S CNF+TVLYIGFV AHT+P+LYE+YEDEVD F   +  +   HY+K D+  LS+IP 
Sbjct: 201 VGSCCNFLTVLYIGFVGAHTMPVLYERYEDEVDGFMDSMIMKFHSHYKKLDTGFLSRIPS 260

Query: 241 GAFKGKKYE 250
           G F  KK E
Sbjct: 261 GKFGLKKRE 267

[Close]

BLAST of Cucsa.179920 vs. TAIR10
Match: AT2G46170.1 (AT2G46170.1 Reticulon family protein)

HSP 1 Score: 217.6 bits (553), Expect = 8.6e-57
Identity = 107/241 (44.40%), Postives = 155/241 (64.32%), Query Frame = 1


Query: 6   TAEDFINNISEVLTEHGQKGKSVSFFGEDSKSSSVAGQINRIFGRQKPVYNLLGGGKSAD 65
           T E  +  ISE +  H     S S + +    S+V  +I R+FGR+KPV+ +LGGGK AD
Sbjct: 11  TEESLMEKISEKIHHHDSSSSSESEYEKPDSPSAVKAKIYRMFGREKPVHKVLGGGKPAD 70

Query: 66  VLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQFMWTNASGFLNRSS 125
           V LWR+KK+S +VL  AT IWVLFE + YH L+L+C   +L +   F+W+NA   +N++S
Sbjct: 71  VFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFLWSNAHTLINKTS 130

Query: 126 SNVPRLVLPKELFVNIAVTFGAEVNRALCYLQDIACEGNLKHFLVAVVSLWVGAVISSWC 185
             +P + +P+E F+ +A +   E+N+A   L+ IA   +LK FL+ VV LW+ +V+ +W 
Sbjct: 131 PQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVVGLWIISVVGNWF 190

Query: 186 NFVTVLYIGFVAAHTLPILYEKYEDEVDTFAYKVFDQLCGHYQKFDSSVLSKIPRGAFKG 245
           NF+T++YI FV  HT+P+LYEK+ED+VD  A K   +L   Y  FD  VLSKIP  + K 
Sbjct: 191 NFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVVFDEKVLSKIPIASLKA 250

Query: 246 K 247
           K
Sbjct: 251 K 251

[Close]

BLAST of Cucsa.179920 vs. TAIR10
Match: AT4G23630.1 (AT4G23630.1 VIRB2-interacting protein 1)

HSP 1 Score: 200.3 bits (508), Expect = 1.4e-51
Identity = 101/256 (39.45%), Postives = 152/256 (59.38%), Query Frame = 1


Query: 3   EKMTAEDFINNISEVLTEHGQKGKSVSFFGED-----------SKSSSVAGQINRIFGRQ 62
           E +  E  ++ ISE +  HG    S S   +D           S SSS+  ++ R+FGR+
Sbjct: 19  EVVERESLMDKISEKI-HHGGDSSSSSSSSDDEDEKKKTKKPSSPSSSMKSKVYRLFGRE 78

Query: 63  KPVYNLLGGGKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQ 122
           +PV+ +LGGGK AD+ +W+NKK+S  VL GAT  WV+FE + YH LTL+C  +++ +   
Sbjct: 79  QPVHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMIVVLAVL 138

Query: 123 FMWTNASGFLNRSSSNVPRLVLPKELFVNIAVTFGAEVNRALCYLQDIACEGNLKHFLVA 182
           F+W+NA+ F+N+S   +P + +P+E  + +A     E+NR    L++IA   +LK FL+A
Sbjct: 139 FLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLKKFLIA 198

Query: 183 VVSLWVGAVISSWCNFVTVLYIGFVAAHTLPILYEKYEDEVDTFAYKVFDQLCGHYQKFD 242
           +  LWV +++    NF+T+ YI  V   T+P+ Y+KYED+VD    K   +L   Y   D
Sbjct: 199 IAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKKQYAVLD 258

Query: 243 SSVLSKIPRGAFKGKK 248
             VLSKIP G  K KK
Sbjct: 259 EKVLSKIPLGPLKNKK 273

[Close]

BLAST of Cucsa.179920 vs. TAIR10
Match: AT4G11220.1 (AT4G11220.1 VIRB2-interacting protein 2)

HSP 1 Score: 199.1 bits (505), Expect = 3.1e-51
Identity = 94/251 (37.45%), Postives = 152/251 (60.56%), Query Frame = 1


Query: 3   EKMTAEDFINNISEVLTEHGQKGKSVSFFGEDSKSSS------VAGQINRIFGRQKPVYN 62
           E +  E  +  +SE +   G    S S   E+ K SS      +  ++ R+FGR++PV+ 
Sbjct: 19  EVVERESLMEKLSEKIHHKGDSSSSSSSDDENEKKSSSSSPKSLKSKVYRLFGRERPVHK 78

Query: 63  LLGGGKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQFMWTN 122
           +LGGGK AD+ +W++KK+S  V  GAT+ WVLFE + YH LTL+C  +++ +   F+W+N
Sbjct: 79  VLGGGKPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMIVALAVLFLWSN 138

Query: 123 ASGFLNRSSSNVPRLVLPKELFVNIAVTFGAEVNRALCYLQDIACEGNLKHFLVAVVSLW 182
           A+ F+++S   +P + +P+E  + +A     E+NR +  L++IA   ++K FL A+  LW
Sbjct: 139 ATMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDIKKFLSAIAGLW 198

Query: 183 VGAVISSWCNFVTVLYIGFVAAHTLPILYEKYEDEVDTFAYKVFDQLCGHYQKFDSSVLS 242
           V +++    +F+T+ YI  V   T+P+ Y+KYED+VD++  K   +L   Y   D+ V S
Sbjct: 199 VLSILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEKAMAELKKQYAVLDAKVFS 258

Query: 243 KIPRGAFKGKK 248
           KIPRG  K KK
Sbjct: 259 KIPRGPLKDKK 269

[Close]

BLAST of Cucsa.179920 vs. TAIR10
Match: AT1G64090.2 (AT1G64090.2 Reticulan like protein B3)

HSP 1 Score: 195.3 bits (495), Expect = 4.5e-50
Identity = 100/256 (39.06%), Postives = 152/256 (59.38%), Query Frame = 1


Query: 8   EDFINNISEVLTEHGQKGKSVSFFGEDSKSSSVAGQINRIFGRQKPVYNLLGGGK----- 67
           E  +  ISE +  H     S S   +D  S+S+  +I R+FGR++P++ L GGGK     
Sbjct: 9   ESIMEKISEKIHGHDDSSSSSSDSDDDKNSASLKTKIYRLFGREQPLHKLFGGGKHSENQ 68

Query: 68  -----------SADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQ 127
                      +AD+ LWRNKK+S  VL  AT+ W+LFE L Y+ LTL     +L +   
Sbjct: 69  DINERFGLVFAAADIFLWRNKKVSGGVLGAATVSWILFELLEYNLLTLFGHISILALAVL 128

Query: 128 FMWTNASGFLNRSSSNVPRLVLPKELFVNIAVTFGAEVNRALCYLQDIACEGNLKHFLVA 187
           F+W++AS F+++S  ++P + +P+++ + +A     E+NR    L+DIA   +LK FL+ 
Sbjct: 129 FLWSSASTFIHKSPLHIPEVHIPEDVVLQLASGLRIEINRGFTVLRDIASGRDLKKFLLV 188

Query: 188 VVSLWVGAVISSWCNFVTVLYIGFVAAHTLPILYEKYEDEVDTFAYKVFDQLCGHYQKFD 244
           +  LWV + + S CNF+T++YI  V   T+P+LYEKYED+VD F  K   ++   Y +FD
Sbjct: 189 IAGLWVLSKVGSSCNFLTLIYIATVLLFTIPVLYEKYEDKVDDFGEKAMREIKKQYVEFD 248

[Close]

BLAST of Cucsa.179920 vs. NCBI nr
Match: gi|778691333|ref|XP_011653261.1| (PREDICTED: reticulon-like protein B8 [Cucumis sativus])

HSP 1 Score: 504.2 bits (1297), Expect = 1.3e-139
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 1


Query: 1   MSEKMTAEDFINNISEVLTEHGQKGKSVSFFGEDSKSSSVAGQINRIFGRQKPVYNLLGG 60
           MSEKMTAEDFINNISEVLTEHGQKGKSVSFFGEDSKSSSVAGQINRIFGRQKPVYNLLGG
Sbjct: 1   MSEKMTAEDFINNISEVLTEHGQKGKSVSFFGEDSKSSSVAGQINRIFGRQKPVYNLLGG 60

Query: 61  GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQFMWTNASGF 120
           GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQFMWTNASGF
Sbjct: 61  GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQFMWTNASGF 120

Query: 121 LNRSSSNVPRLVLPKELFVNIAVTFGAEVNRALCYLQDIACEGNLKHFLVAVVSLWVGAV 180
           LNRSSSNVPRLVLPKELFVNIAVTFGAEVNRALCYLQDIACEGNLKHFLVAVVSLWVGAV
Sbjct: 121 LNRSSSNVPRLVLPKELFVNIAVTFGAEVNRALCYLQDIACEGNLKHFLVAVVSLWVGAV 180

Query: 181 ISSWCNFVTVLYIGFVAAHTLPILYEKYEDEVDTFAYKVFDQLCGHYQKFDSSVLSKIPR 240
           ISSWCNFVTVLYIGFVAAHTLPILYEKYEDEVDTFAYKVFDQLCGHYQKFDSSVLSKIPR
Sbjct: 181 ISSWCNFVTVLYIGFVAAHTLPILYEKYEDEVDTFAYKVFDQLCGHYQKFDSSVLSKIPR 240

Query: 241 GAFKGKKYE 250
           GAFKGKKYE
Sbjct: 241 GAFKGKKYE 249

[Close]

BLAST of Cucsa.179920 vs. NCBI nr
Match: gi|659101885|ref|XP_008451843.1| (PREDICTED: reticulon-like protein B8 isoform X2 [Cucumis melo])

HSP 1 Score: 487.6 bits (1254), Expect = 1.3e-134
Identity = 237/249 (95.18%), Postives = 245/249 (98.39%), Query Frame = 1


Query: 1   MSEKMTAEDFINNISEVLTEHGQKGKSVSFFGEDSKSSSVAGQINRIFGRQKPVYNLLGG 60
           MSEKM AED  NNISEVL EHGQKGKSVSFFGED+K+SSVAGQINRIFGRQKPVYNLLGG
Sbjct: 4   MSEKMIAEDLFNNISEVLAEHGQKGKSVSFFGEDNKASSVAGQINRIFGRQKPVYNLLGG 63

Query: 61  GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQFMWTNASGF 120
           GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQF+WTNASGF
Sbjct: 64  GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQFIWTNASGF 123

Query: 121 LNRSSSNVPRLVLPKELFVNIAVTFGAEVNRALCYLQDIACEGNLKHFLVAVVSLWVGAV 180
           LNRSSSNVPRLVLPKELFVNIAVTFGAEVNRALCYLQDIACEGNLKHFLVAV+SLWVGAV
Sbjct: 124 LNRSSSNVPRLVLPKELFVNIAVTFGAEVNRALCYLQDIACEGNLKHFLVAVLSLWVGAV 183

Query: 181 ISSWCNFVTVLYIGFVAAHTLPILYEKYEDEVDTFAYKVFDQLCGHYQKFDSSVLSKIPR 240
           ISSWCNF+TVLY+GFVAAHTLPILYEKYEDEVDTFAYKVFDQLCGHY+KFDSSVLSKIP+
Sbjct: 184 ISSWCNFITVLYVGFVAAHTLPILYEKYEDEVDTFAYKVFDQLCGHYRKFDSSVLSKIPK 243

Query: 241 GAFKGKKYE 250
           GAFKGKKYE
Sbjct: 244 GAFKGKKYE 252

[Close]

BLAST of Cucsa.179920 vs. NCBI nr
Match: gi|659101883|ref|XP_008451841.1| (PREDICTED: reticulon-like protein B8 isoform X1 [Cucumis melo])

HSP 1 Score: 449.1 bits (1154), Expect = 5.0e-123
Identity = 217/225 (96.44%), Postives = 225/225 (100.00%), Query Frame = 1


Query: 25  GKSVSFFGEDSKSSSVAGQINRIFGRQKPVYNLLGGGKSADVLLWRNKKISASVLTGATI 84
           GKSVSFFGED+K+SSVAGQINRIFGRQKPVYNLLGGGKSADVLLWRNKKISASVLTGATI
Sbjct: 43  GKSVSFFGEDNKASSVAGQINRIFGRQKPVYNLLGGGKSADVLLWRNKKISASVLTGATI 102

Query: 85  IWVLFEWLNYHFLTLVCFALVLGMLAQFMWTNASGFLNRSSSNVPRLVLPKELFVNIAVT 144
           IWVLFEWLNYHFLTLVCFALVLGMLAQF+WTNASGFLNRSSSNVPRLVLPKELFVNIAVT
Sbjct: 103 IWVLFEWLNYHFLTLVCFALVLGMLAQFIWTNASGFLNRSSSNVPRLVLPKELFVNIAVT 162

Query: 145 FGAEVNRALCYLQDIACEGNLKHFLVAVVSLWVGAVISSWCNFVTVLYIGFVAAHTLPIL 204
           FGAEVNRALCYLQDIACEGNLKHFLVAV+SLWVGAVISSWCNF+TVLY+GFVAAHTLPIL
Sbjct: 163 FGAEVNRALCYLQDIACEGNLKHFLVAVLSLWVGAVISSWCNFITVLYVGFVAAHTLPIL 222

Query: 205 YEKYEDEVDTFAYKVFDQLCGHYQKFDSSVLSKIPRGAFKGKKYE 250
           YEKYEDEVDTFAYKVFDQLCGHY+KFDSSVLSKIP+GAFKGKKYE
Sbjct: 223 YEKYEDEVDTFAYKVFDQLCGHYRKFDSSVLSKIPKGAFKGKKYE 267

[Close]

BLAST of Cucsa.179920 vs. NCBI nr
Match: gi|764611730|ref|XP_011467620.1| (PREDICTED: reticulon-like protein B8 isoform X2 [Fragaria vesca subsp. vesca])

HSP 1 Score: 368.6 bits (945), Expect = 8.5e-99
Identity = 180/249 (72.29%), Postives = 210/249 (84.34%), Query Frame = 1


Query: 1   MSEKMTAEDFINNISEVLTEHGQKGKSVSFFGEDSKSSSVAGQINRIFGRQKPVYNLLGG 60
           M EK+T ED +NNI   L E+  K KSV FFG+D KS SV+ Q+NR+FGRQKPV++LLGG
Sbjct: 1   MPEKITPEDLLNNIVG-LAENSSKQKSVPFFGDD-KSDSVSSQLNRLFGRQKPVHHLLGG 60

Query: 61  GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQFMWTNASGF 120
           GKSADVLLWRNKKISASVLTGAT IWVLFEWLNYHFLTLV FALVLGMLAQF+W+N SGF
Sbjct: 61  GKSADVLLWRNKKISASVLTGATFIWVLFEWLNYHFLTLVGFALVLGMLAQFIWSNFSGF 120

Query: 121 LNRSSSNVPRLVLPKELFVNIAVTFGAEVNRALCYLQDIACEGNLKHFLVAVVSLWVGAV 180
           +NRSSS VPRLVLP+ELFVNIA++ GAE+NR L ++QD+AC GNLK FLV V SLW  +V
Sbjct: 121 VNRSSSKVPRLVLPEELFVNIAISIGAEINRGLEFIQDVACGGNLKQFLVVVASLWAASV 180

Query: 181 ISSWCNFVTVLYIGFVAAHTLPILYEKYEDEVDTFAYKVFDQLCGHYQKFDSSVLSKIPR 240
           I SWCNF+TVLYIGFVAAHTLP+LYE+Y D++D F Y VF QL  HY+K DSSVLS+IP+
Sbjct: 181 IGSWCNFLTVLYIGFVAAHTLPVLYERYGDQIDDFVYSVFGQLQNHYRKLDSSVLSRIPK 240

Query: 241 GAFKGKKYE 250
           G  K KK++
Sbjct: 241 GNLKAKKHD 247

[Close]

BLAST of Cucsa.179920 vs. NCBI nr
Match: gi|1009127311|ref|XP_015880630.1| (PREDICTED: reticulon-like protein B8 [Ziziphus jujuba])

HSP 1 Score: 365.5 bits (937), Expect = 7.2e-98
Identity = 180/249 (72.29%), Postives = 207/249 (83.13%), Query Frame = 1


Query: 1   MSEKMTAEDFINNISEVLTEHGQKGKSVSFFGEDSKSSSVAGQINRIFGRQKPVYNLLGG 60
           M+EK TA + +NN+ E L E   K KSVSFF E++KS SV  QINR+FGRQKPV+ +LGG
Sbjct: 1   MTEKTTAANILNNLVETLAESSGKQKSVSFF-EENKSDSVTSQINRLFGRQKPVHRILGG 60

Query: 61  GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQFMWTNASGF 120
           GKSADVLLWRNKKISASVLTGAT +WVLFEWLNYH LTL+ FALVLGMLAQF+ TNASG 
Sbjct: 61  GKSADVLLWRNKKISASVLTGATAVWVLFEWLNYHLLTLISFALVLGMLAQFVLTNASGL 120

Query: 121 LNRSSSNVPRLVLPKELFVNIAVTFGAEVNRALCYLQDIACEGNLKHFLVAVVSLWVGAV 180
           LNRS S VPRLVLP +LFVNIAV+ G E+NRAL +LQD+AC GNLK  LV + SLW  AV
Sbjct: 121 LNRSPSTVPRLVLPDDLFVNIAVSVGYELNRALGFLQDVACGGNLKQLLVVIASLWAAAV 180

Query: 181 ISSWCNFVTVLYIGFVAAHTLPILYEKYEDEVDTFAYKVFDQLCGHYQKFDSSVLSKIPR 240
           I  WCNF+TVLYIGFVAAHTLP+LYEKYEDEVD+F YKVF+QL  +Y+K D+ VLS+IP+
Sbjct: 181 IGGWCNFLTVLYIGFVAAHTLPVLYEKYEDEVDSFVYKVFEQLQHNYKKLDAGVLSRIPK 240

Query: 241 GAFKGKKYE 250
           G FKGKK E
Sbjct: 241 GKFKGKKAE 248

The following BLAST results are available for this feature:

BLAST of Cucsa.179920 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RTNLH_ARATH	1.2e-84	61.04	Reticulon-like protein B8 OS=Arabidopsis thaliana GN=RTNLB8 PE=2 SV=1	[more]
RTNLE_ARATH	1.5e-55	44.40	Reticulon-like protein B5 OS=Arabidopsis thaliana GN=RTNLB5 PE=1 SV=1	[more]
RTNLF_ARATH	1.1e-53	43.51	Reticulon-like protein B6 OS=Arabidopsis thaliana GN=RTNLB6 PE=1 SV=1	[more]
RTNLC_ARATH	1.0e-51	41.67	Reticulon-like protein B3 OS=Arabidopsis thaliana GN=RTNLB3 PE=2 SV=1	[more]
RTNLA_ARATH	2.5e-50	39.45	Reticulon-like protein B1 OS=Arabidopsis thaliana GN=RTNLB1 PE=1 SV=1	[more]

BLAST of Cucsa.179920 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXG6_CUCSA	9.0e-140	100.00	Reticulon-like protein OS=Cucumis sativus GN=Csa_4G063430 PE=4 SV=1	[more]
B9S6H1_RICCO	5.5e-97	70.28	Reticulon-like protein OS=Ricinus communis GN=RCOM_0536570 PE=4 SV=1	[more]
A0A0B0PZ43_GOSAR	7.2e-97	69.48	Reticulon-like protein OS=Gossypium arboreum GN=F383_14573 PE=4 SV=1	[more]
V7B9A0_PHAVU	6.1e-96	69.48	Reticulon-like protein OS=Phaseolus vulgaris GN=PHAVU_008G196600g PE=4 SV=1	[more]
E0CU01_VITVI	1.0e-95	67.47	Reticulon-like protein OS=Vitis vinifera GN=VIT_12s0028g01090 PE=4 SV=1	[more]

BLAST of Cucsa.179920 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G10260.3	6.7e-86	61.04	Reticulon family protein	[more]
AT2G46170.1	8.6e-57	44.40	Reticulon family protein	[more]
AT4G23630.1	1.4e-51	39.45	VIRB2-interacting protein 1	[more]
AT4G11220.1	3.1e-51	37.45	VIRB2-interacting protein 2	[more]
AT1G64090.2	4.5e-50	39.06	Reticulan like protein B3	[more]

BLAST of Cucsa.179920 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778691333\|ref\|XP_011653261.1\|	1.3e-139	100.00	PREDICTED: reticulon-like protein B8 [Cucumis sativus]	[more]
gi\|659101885\|ref\|XP_008451843.1\|	1.3e-134	95.18	PREDICTED: reticulon-like protein B8 isoform X2 [Cucumis melo]	[more]
gi\|659101883\|ref\|XP_008451841.1\|	5.0e-123	96.44	PREDICTED: reticulon-like protein B8 isoform X1 [Cucumis melo]	[more]
gi\|764611730\|ref\|XP_011467620.1\|	8.5e-99	72.29	PREDICTED: reticulon-like protein B8 isoform X2 [Fragaria vesca subsp. vesca]	[more]
gi\|1009127311\|ref\|XP_015880630.1\|	7.2e-98	72.29	PREDICTED: reticulon-like protein B8 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003388	Reticulon
IPR003388	Reticulon
IPR003388	Reticulon

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009963	positive regulation of flavonoid biosynthetic process
biological_process	GO:0006612	protein targeting to membrane
biological_process	GO:0010363	regulation of plant-type hypersensitive response
biological_process	GO:0008150	biological_process
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.179920.1	Cucsa.179920.1	mRNA
Cucsa.179920.2	Cucsa.179920.2	mRNA
Cucsa.179920.3	Cucsa.179920.3	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003388	Reticulon	PFAM	PF02453	Reticulon	coord: 64..170 score: 1.2
IPR003388	Reticulon	PROFILE	PS50845	RETICULON	coord: 63..171 score: 21
None	No IPR available	PANTHER	PTHR10994	RETICULON	coord: 3..170 score: 1.8E
None	No IPR available	PANTHER	PTHR10994:SF62	RETICULON-LIKE PROTEIN B8	coord: 3..170 score: 1.8E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.179920	Cla005430	Watermelon (97103) v1	cgywmB343
Cucsa.179920	Csa4G063430	Cucumber (Chinese Long) v2	cgycuB275
Cucsa.179920	MELO3C016191	Melon (DHL92) v3.5.1	cgymeB323
Cucsa.179920	ClCG07G010810	Watermelon (Charleston Gray)	cgywcgB320
Cucsa.179920	CSPI04G07270	Wild cucumber (PI 183967)	cgycpiB285
Cucsa.179920	CmaCh16G004780	Cucurbita maxima (Rimu)	cgycmaB0511
Cucsa.179920	CmaCh04G006220	Cucurbita maxima (Rimu)	cgycmaB0512
Cucsa.179920	CmoCh16G005170	Cucurbita moschata (Rifu)	cgycmoB0511
Cucsa.179920	CmoCh04G006690	Cucurbita moschata (Rifu)	cgycmoB0512
Cucsa.179920	Lsi07G008100	Bottle gourd (USVL1VR-Ls)	cgylsiB301
Cucsa.179920	Cp4.1LG14g03170	Cucurbita pepo (Zucchini)	cgycpeB0493
Cucsa.179920	Cp4.1LG01g01010	Cucurbita pepo (Zucchini)	cgycpeB0494
Cucsa.179920	MELO3C016191.2	Melon (DHL92) v3.6.1	cgymedB318
Cucsa.179920	CsaV3_4G007510	Cucumber (Chinese Long) v3	cgycucB289
Cucsa.179920	Cla97C07G137550	Watermelon (97103) v2	cgywmbB324
Cucsa.179920	Bhi01G002394	Wax gourd	cgywgoB369
Cucsa.179920	Carg13123	Silver-seed gourd	carcgyB0052
Cucsa.179920	Carg11401	Silver-seed gourd	carcgyB0732

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None