Cp4.1LG14g03170 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG14g03170
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Reticulon-like protein
Location	Cp4.1LG14 : 2501713 .. 2505309 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGAGAATGTAACTGCTAAGGATCTTCCTCAGAATTTTTCTGAAGCTCCTGCTGAACGTGGTCATAAGGCAGAATCAGTATCGTCATCAAGTTCAGTGCCTGGTCGGGACAAGCGGATATTTGGACGAAAAAAGTCCGTTCACCATCTTCTCGGGGGCGGAAAATGTATATCCTTATTTATATGTTCTTAGTTTTTTTTCATCTTCTATAATCTTTTTCATGTCATGAATCATATTACTTCATTTTGATTTCTCTGCTGATCAAATATTTGTAGCTGCTGATGTGCTGCTATGGAAGAACAAGAAAATCTCAGCTAGTGTTTTGACTAGTGCAACTATTATTTGGATACTGTTTGAATGGCTTAGTTACCACTTCTTGACTATTGTTTGCTTTGCTCTGGTTCTTGGTATGTTGTTTCAGTTTATATGGACAAATACCTCAGGATTTCTGGACAGGTGATTGGAAAATAGACGTTTATGCCATTGTTTCCCATTGACTTCAATGCATTTTCTGGTTTAACAAATGCTGATGCATTCTGTAACATGTTTCGTGCACTGCAGAACATCGTCTAATGTTCCTCACCTCGATCTTCCTGAGGAACTATTTGTCGAAATTGCTGTCTCATTTGGTGCCGAGGCTAACCGAGCTCTTCATTTTCTCCAAGATATTGCTTGTAATGGAGATTTGAAACAATTCCTTGGGGTATGCTATCATATTTTATGTACTACTTTTGCAATTTTGTGCATTTCTAAAGGTCATTAGTTGTAATAGCCCAAGTTCACCGCTAACGGATATTGTTCTCTTTAAGCTTTTTTCCCTTTCGGGTTTCCCTTCAAGGTTTTAAAACGCATCTGTTAGGGAGAGGTTTCCACAGCCTTGTAAACAATGTTTTGTTCCCCTCTCCAACCAATGTGGGATCTCACAATCCACCCCCCTTCGGGGCCTAGTGTCCTCGTTGGCACTCGTTCTCCTCTCCAATCGATGTGGGATCTCACAATCCACCTTCCTTTAGGGCCCAACATCCTCGCTGGAACACCGCTTGGTGTTCACCTCCCTTCGGGGCCTAGTGTCCTCGTTGGCACTCGTTCTCCTCTCCAATCGATGTGGGATCTCACAATCCACCTCCCTTCAAGGCCCAACATCCTCGCTGGAACACCGCTTGGTGTCCACCCCCCTTCGGGGCTCAACCTCTGTAACGACCCAGATCCACTGCGGGCAGATATTGTCCTCTTTGGGCTTTCCCTTTTGGGCTTCCCCTCGAGGCTTTAAAACGCGTCTGCTAGGGGAAGGTTTCCACACCCTTATAAATGGTGGTTTGTTCTCCTCCCCAACCAATGTGGGACATCACAACCTCCTTGTTGACACACCCCCCGGTGTCTAGCTTTGATACCATTTGTAACTGACCAAGCTCATCACTAGCAAATATTGTCCTCTTTCAGTTTTTTCTTCCGTGCTTCCCCTCAAGATTTTAAAACTCGCCTATTAGGGATAAGTTTTCACGCCCTTATAAAGAATGGTTCGTTCCCCTCTCCAACCGATGTGGGATCTCAAATTAGTATTCTCTGCACTAGACATTCATATATGAGTATTTCAGTTCAAGACCTTGATTTTGAATAAATACGAGCATCAACTTTCTGTTATTGATCTTAAACACATAGCTCCCCTCACCTCTCACCTTAGGTGCATGCCTGAGGTTGCCTTGGAAACACTGATGGTAGCATTCTAAAGGGGATCAGCTTAAAACCATGAACCATCTGTATCAATGAATGCCATTACTCAACAATAGACATGAGTGGTAAAAGAAAAGAAGACATGCACCCACCGCTAGCAGATATTGTCCATTTTAGTTCGTTATGTATCGCTGTCAGCCTCACGATTTAAAAACGCATCTATTAGGGAGATGTTTCCATACCCTTATAAAGAATGTTTCATTCCACTCTCCAACCAATGTGGGACCTCACAATCCCCCCTTTTGGGGTCCAGCGTCCTCGCTGGCACATCGCTCGATGCTTGGCTCTAATACCATTTGTAACAGCCCAAGCCCACCGCTAATAGATATTTTCCGCTTTAGCCCGTTACGTATCACCGTCAGCCTCACGATTTTAAAACGCGTCTACTAAGGAGAGGTTTCCACACTTTTATAAGAAATGATTCGTTCCCCTCTCCAACCGATGTGGAATCTCACTCGACATTTGAAAAATCCTCTCTATCTTTCCTGAACTTGCTGCTGATTCAGGAAGCGATATATGCAACTAATATGTTAGTTGAAAATATGAACACCAAACACATTGGACATATAAGTATGGTGGCTTAGTTCTGCAAGAATCTGCTATAATTGGATGGAGTTTCTTTGATTATAACTCTCTAGGAACTTGCTGTTTTGATTTTCTTGTAGATGCTTCTTTAATGTGAATATGTTTTCAGGCTGTAGTAAGCTTGTGGGCTGGTGCTGTGATTAGTAGCTGGTCCAATTTCATTACTGTCTTGTATGTTGGTAAGTGGCTTCAGATTCAGCATCTCAAAACATTTACATCTTTAATTTCTTTGATCATATTATTTACTTACAACCAGTAGGATTCATTCTGGGTTGTCCAAATATTAATCTACAGTCCTAGAGGGGATGACCTGCAGATATATCTGTTTCAAACTATGATGGCTGCTTACTTACCACTAAAGTGTATGTGTGAGATCCCACATCGGTTGGAGAGGAGAACGAAACGTTCTTTATAAGGGTGTGGAAACCTCTCTCTAGCAGACACGTTTTAAAAACCTTGAGGGGAAGCCCGAAAAGGAAAGCTCAAAGAGGCCAATATCTGCTAGCGGTGGGCTTGGGCCGTTACAAATGGTATTAGAGATACATATCAGGCGATGTGCCAGCAATGAAGCTGAGCTCCAAGGGGGGTGGACACAATGCGGTGTGCCAACAAGGACGCTAGGCCTTAAAGGGGGGATGGATGGGGGGTCCCACATTGATTGGAGAAGGGAACAAGTGCTAGCAAGGACACTAGGCCCTGAAGAGGGGTGAATTGTGAGATCCCACATTGGTTGGGGAGAAGAACGAAACATTCTTTATAAGGGTATGGAAACCTCTCTCTAACAGACGCGGTTTAAAAAACTTGAGGGGAAGCCCGAAAAGAAAACCCTAAAGAATACAATATCTACTAGCGGTGGGCTTGGGCCGTTACAGTCTGGGTCAGGTTACACTCATCTCAACTAGTTTCACACGACCATATAATCCTACAACATTATTTCATTTCGTCAAGTAAAATATAGGATAACTACATCGTACATCCCATGGAAAGTCAGATATTCCTTATGCCTAATTGTTTTCAAACACAAAATGTTGTAAGTCGAGACGATTGTCCTATCCTATGAAACCACCAATCTTCACAACTACTAACACATTTCAAATACATCCAGGTTTCGTTGCAGCCCATACGCTTCCAATTCTGTACGAGAAATACGAAGATGAAGTCGACACCTTCGCATTCAACGTCTTTGACCAGCTTTGTGGTCACTTCCAGAAGTTGGATTCCAATGTCCTTAGCAAGATCCCCAGAGGAGGACCATTACCAGAAAAGAAGCATGAATAG

mRNA sequence

ATGTCTGAGAATGTAACTGCTAAGGATCTTCCTCAGAATTTTTCTGAAGCTCCTGCTGAACGTGGTCATAAGGCAGAATCAGTATCGTCATCAAGTTCAGTGCCTGGTCGGGACAAGCGGATATTTGGACGAAAAAAGTCCGTTCACCATCTTCTCGGGGGCGGAAAATCTGCTGATGTGCTGCTATGGAAGAACAAGAAAATCTCAGCTAGTGTTTTGACTAGTGCAACTATTATTTGGATACTGTTTGAATGGCTTAGTTACCACTTCTTGACTATTGTTTGCTTTGCTCTGGTTCTTGGTATGTTGTTTCAGTTTATATGGACAAATACCTCAGGATTTCTGGACAGAACATCGTCTAATGTTCCTCACCTCGATCTTCCTGAGGAACTATTTGTCGAAATTGCTGTCTCATTTGGTGCCGAGGCTAACCGAGCTCTTCATTTTCTCCAAGATATTGCTTGTAATGGAGATTTGAAACAATTCCTTGGGGCTGTAGTAAGCTTGTGGGCTGGTGCTGTGATTAGTAGCTGGTCCAATTTCATTACTGTCTTGTATGTTGGTTTCGTTGCAGCCCATACGCTTCCAATTCTGTACGAGAAATACGAAGATGAAGTCGACACCTTCGCATTCAACGTCTTTGACCAGCTTTGTGGTCACTTCCAGAAGTTGGATTCCAATGTCCTTAGCAAGATCCCCAGAGGAGGACCATTACCAGAAAAGAAGCATGAATAG

Coding sequence (CDS)

ATGTCTGAGAATGTAACTGCTAAGGATCTTCCTCAGAATTTTTCTGAAGCTCCTGCTGAACGTGGTCATAAGGCAGAATCAGTATCGTCATCAAGTTCAGTGCCTGGTCGGGACAAGCGGATATTTGGACGAAAAAAGTCCGTTCACCATCTTCTCGGGGGCGGAAAATCTGCTGATGTGCTGCTATGGAAGAACAAGAAAATCTCAGCTAGTGTTTTGACTAGTGCAACTATTATTTGGATACTGTTTGAATGGCTTAGTTACCACTTCTTGACTATTGTTTGCTTTGCTCTGGTTCTTGGTATGTTGTTTCAGTTTATATGGACAAATACCTCAGGATTTCTGGACAGAACATCGTCTAATGTTCCTCACCTCGATCTTCCTGAGGAACTATTTGTCGAAATTGCTGTCTCATTTGGTGCCGAGGCTAACCGAGCTCTTCATTTTCTCCAAGATATTGCTTGTAATGGAGATTTGAAACAATTCCTTGGGGCTGTAGTAAGCTTGTGGGCTGGTGCTGTGATTAGTAGCTGGTCCAATTTCATTACTGTCTTGTATGTTGGTTTCGTTGCAGCCCATACGCTTCCAATTCTGTACGAGAAATACGAAGATGAAGTCGACACCTTCGCATTCAACGTCTTTGACCAGCTTTGTGGTCACTTCCAGAAGTTGGATTCCAATGTCCTTAGCAAGATCCCCAGAGGAGGACCATTACCAGAAAAGAAGCATGAATAG

Protein sequence

MSENVTAKDLPQNFSEAPAERGHKAESVSSSSSVPGRDKRIFGRKKSVHHLLGGGKSADVLLWKNKKISASVLTSATIIWILFEWLSYHFLTIVCFALVLGMLFQFIWTNTSGFLDRTSSNVPHLDLPEELFVEIAVSFGAEANRALHFLQDIACNGDLKQFLGAVVSLWAGAVISSWSNFITVLYVGFVAAHTLPILYEKYEDEVDTFAFNVFDQLCGHFQKLDSNVLSKIPRGGPLPEKKHE

Homology

[Close]

BLAST of Cp4.1LG14g03170 vs. Swiss-Prot
Match: RTNLH_ARATH (Reticulon-like protein B8 OS=Arabidopsis thaliana GN=RTNLB8 PE=2 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 3.9e-72
Identity = 127/227 (55.95%), Postives = 169/227 (74.45%), Query Frame = 1


Query: 9   DLPQNFSEAPAERGHKAESVSSSSSVPGRDKRIFGRKKSVHHLLGGGKSADVLLWKNKKI 68
           DL  NF+E   +  H +       SV  R  R+F R+K +HH+LGGGKSADVLLW+NKKI
Sbjct: 13  DLVDNFTETVQKNKHGSSFFEQEDSVSSRFNRLFDRQKPIHHVLGGGKSADVLLWRNKKI 72

Query: 69  SASVLTSATIIWILFEWLSYHFLTIVCFALVLGMLFQFIWTNTSGFLDRTSSNVPHLDLP 128
           SASVL  AT IW+LFEW+++HFL++VC+AL+LGM+ QF+W+N SGFL+R+ S VP L LP
Sbjct: 73  SASVLMGATAIWVLFEWINFHFLSLVCYALLLGMIAQFVWSNASGFLNRSQSRVPRLVLP 132

Query: 129 EELFVEIAVSFGAEANRALHFLQDIACNGDLKQFLGAVVSLWAGAVISSWSNFITVLYVG 188
           ++ F E+ V+ G E NR L FLQD+AC G+LKQFL AV+ LW  A++ S  NF+TVLY+G
Sbjct: 133 KDFFAEVGVAVGKEVNRGLLFLQDLACKGNLKQFLMAVIGLWVAAMVGSCCNFLTVLYIG 192

Query: 189 FVAAHTLPILYEKYEDEVDTFAFNVFDQLCGHFQKLDSNVLSKIPRG 236
           FV AHT+P+LYE+YEDEVD F  ++  +   H++KLD+  LS+IP G
Sbjct: 193 FVGAHTMPVLYERYEDEVDGFMDSMIMKFHSHYKKLDTGFLSRIPSG 239

[Close]

BLAST of Cp4.1LG14g03170 vs. Swiss-Prot
Match: RTNLE_ARATH (Reticulon-like protein B5 OS=Arabidopsis thaliana GN=RTNLB5 PE=1 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 1.6e-46
Identity = 102/245 (41.63%), Postives = 152/245 (62.04%), Query Frame = 1


Query: 1   MSENVTAKDLP--QNFSEAPAERGHKAESVSSS----------SSVPGRDKRIFGRKKSV 60
           M+E +  K +P  ++  E  +E+ H  +S SSS          S+V  +  R+FGR+K V
Sbjct: 1   MAEEIE-KSVPTEESLMEKISEKIHHHDSSSSSESEYEKPDSPSAVKAKIYRMFGREKPV 60

Query: 61  HHLLGGGKSADVLLWKNKKISASVLTSATIIWILFEWLSYHFLTIVCFALVLGMLFQFIW 120
           H +LGGGK ADV LW++KK+S +VL  AT IW+LFE + YH L+++C   +L +   F+W
Sbjct: 61  HKVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFLW 120

Query: 121 TNTSGFLDRTSSNVPHLDLPEELFVEIAVSFGAEANRALHFLQDIACNGDLKQFLGAVVS 180
           +N    +++TS  +P + +PEE F+ +A S   E N+A   L+ IA   DLK+FL  VV 
Sbjct: 121 SNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVVG 180

Query: 181 LWAGAVISSWSNFITVLYVGFVAAHTLPILYEKYEDEVDTFAFNVFDQLCGHFQKLDSNV 234
           LW  +V+ +W NF+T++Y+ FV  HT+P+LYEK+ED+VD  A     +L   +   D  V
Sbjct: 181 LWIISVVGNWFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVVFDEKV 240

[Close]

BLAST of Cp4.1LG14g03170 vs. Swiss-Prot
Match: RTNLF_ARATH (Reticulon-like protein B6 OS=Arabidopsis thaliana GN=RTNLB6 PE=1 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 2.4e-45
Identity = 96/232 (41.38%), Postives = 143/232 (61.64%), Query Frame = 1


Query: 12  QNFSEAPAERGHKAESVSSS----------SSVPGRDKRIFGRKKSVHHLLGGGKSADVL 71
           ++  E  A++ H  +S SSS          S++  +  R+FGR+K VH +LGGG  ADV 
Sbjct: 13  ESLMEKIADKIHDHDSSSSSDSEHEKPESPSALKAKIYRLFGREKPVHKVLGGGLPADVF 72

Query: 72  LWKNKKISASVLTSATIIWILFEWLSYHFLTIVCFALVLGMLFQFIWTNTSGFLDRTSSN 131
           LW++KK+SASVL  AT IW+LFE + YHFL++VC  L+  +   F+ +N   F+++T   
Sbjct: 73  LWRDKKLSASVLGVATAIWVLFELVEYHFLSLVCHILIFALAALFLLSNAHAFMNKTPPK 132

Query: 132 VPHLDLPEELFVEIAVSFGAEANRALHFLQDIACNGDLKQFLGAVVSLWAGAVISSWSNF 191
           +P + + EE F+ I  +   E N+A   L+ IA   DLK+FL  V  LW  +V+ +W NF
Sbjct: 133 IPEIHIKEEHFLMIVSALRNELNQAFVILRSIALGRDLKKFLMVVFGLWIISVVGNWFNF 192

Query: 192 ITVLYVGFVAAHTLPILYEKYEDEVDTFAFNVFDQLCGHFQKLDSNVLSKIP 234
           +T++Y+ FV  HT+P+LYEK+ED+VD  A     +L  H+   D  VLSK+P
Sbjct: 193 LTLVYICFVVLHTVPMLYEKHEDKVDPVAEKTLKELKKHYMVFDEKVLSKLP 244

[Close]

BLAST of Cp4.1LG14g03170 vs. Swiss-Prot
Match: RTNLB_ARATH (Reticulon-like protein B2 OS=Arabidopsis thaliana GN=RTNLB2 PE=1 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 2.4e-45
Identity = 85/230 (36.96%), Postives = 142/230 (61.74%), Query Frame = 1


Query: 15  SEAPAERGHKAESVSSSSSVPGRDKRIFGRKKSVHHLLGGGKSADVLLWKNKKISASVLT 74
           S +  +   K  S SS  S+  +  R+FGR++ VH +LGGGK AD+ +WK+KK+S  V  
Sbjct: 43  SSSSDDENEKKSSSSSPKSLKSKVYRLFGRERPVHKVLGGGKPADIFMWKDKKMSGGVFG 102

Query: 75  SATIIWILFEWLSYHFLTIVCFALVLGMLFQFIWTNTSGFLDRTSSNVPHLDLPEELFVE 134
            AT+ W+LFE + YH LT++C  +++ +   F+W+N + F+ ++   +P + +PEE  ++
Sbjct: 103 GATVAWVLFELMEYHLLTLLCHVMIVALAVLFLWSNATMFIHKSPPKIPEVHIPEEPLLQ 162

Query: 135 IAVSFGAEANRALHFLQDIACNGDLKQFLGAVVSLWAGAVISSWSNFITVLYVGFVAAHT 194
           +A     E NR +  L++IA   D+K+FL A+  LW  +++    +F+T+ Y+  V   T
Sbjct: 163 LASGLRIEINRGISSLREIASGRDIKKFLSAIAGLWVLSILGGCYSFLTLAYIALVLLFT 222

Query: 195 LPILYEKYEDEVDTFAFNVFDQLCGHFQKLDSNVLSKIPRGGPLPEKKHE 245
           +P+ Y+KYED+VD++      +L   +  LD+ V SKIPR GPL +KK +
Sbjct: 223 VPLFYDKYEDKVDSYGEKAMAELKKQYAVLDAKVFSKIPR-GPLKDKKKD 271

[Close]

BLAST of Cp4.1LG14g03170 vs. Swiss-Prot
Match: RTNLA_ARATH (Reticulon-like protein B1 OS=Arabidopsis thaliana GN=RTNLB1 PE=1 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 2.2e-43
Identity = 88/230 (38.26%), Postives = 139/230 (60.43%), Query Frame = 1


Query: 15  SEAPAERGHKAESVSSSSSVPGRDKRIFGRKKSVHHLLGGGKSADVLLWKNKKISASVLT 74
           S+   E+    +  S SSS+  +  R+FGR++ VH +LGGGK AD+ +WKNKK+S  VL 
Sbjct: 47  SDDEDEKKKTKKPSSPSSSMKSKVYRLFGREQPVHKVLGGGKPADIFMWKNKKMSGGVLG 106

Query: 75  SATIIWILFEWLSYHFLTIVCFALVLGMLFQFIWTNTSGFLDRTSSNVPHLDLPEELFVE 134
            AT  W++FE + YH LT++C  +++ +   F+W+N + F++++   +P + +PEE  ++
Sbjct: 107 GATAAWVVFELMEYHLLTLLCHVMIVVLAVLFLWSNATMFINKSPPKIPEVHIPEEPILQ 166

Query: 135 IAVSFGAEANRALHFLQDIACNGDLKQFLGAVVSLWAGAVISSWSNFITVLYVGFVAAHT 194
           +A     E NR    L++IA   DLK+FL A+  LW  +++    NF+T+ Y+  V   T
Sbjct: 167 LASGLRIEINRGFSSLREIASGRDLKKFLIAIAGLWVLSILGGCFNFLTLAYIALVLLFT 226

Query: 195 LPILYEKYEDEVDTFAFNVFDQLCGHFQKLDSNVLSKIPRGGPLPEKKHE 245
           +P+ Y+KYED+VD        +L   +  LD  VLSKIP  GPL  KK +
Sbjct: 227 VPLAYDKYEDKVDPLGEKAMIELKKQYAVLDEKVLSKIPL-GPLKNKKKD 275

[Close]

BLAST of Cp4.1LG14g03170 vs. TrEMBL
Match: A0A0A0KXG6_CUCSA (Reticulon-like protein OS=Cucumis sativus GN=Csa_4G063430 PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 1.0e-95
Identity = 184/250 (73.60%), Postives = 208/250 (83.20%), Query Frame = 1


Query: 1   MSENVTAKDLPQNFSEAPAERGHKAESVS------SSSSVPGRDKRIFGRKKSVHHLLGG 60
           MSE +TA+D   N SE   E G K +SVS       SSSV G+  RIFGR+K V++LLGG
Sbjct: 1   MSEKMTAEDFINNISEVLTEHGQKGKSVSFFGEDSKSSSVAGQINRIFGRQKPVYNLLGG 60

Query: 61  GKSADVLLWKNKKISASVLTSATIIWILFEWLSYHFLTIVCFALVLGMLFQFIWTNTSGF 120
           GKSADVLLW+NKKISASVLT ATIIW+LFEWL+YHFLT+VCFALVLGML QF+WTN SGF
Sbjct: 61  GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQFMWTNASGF 120

Query: 121 LDRTSSNVPHLDLPEELFVEIAVSFGAEANRALHFLQDIACNGDLKQFLGAVVSLWAGAV 180
           L+R+SSNVP L LP+ELFV IAV+FGAE NRAL +LQDIAC G+LK FL AVVSLW GAV
Sbjct: 121 LNRSSSNVPRLVLPKELFVNIAVTFGAEVNRALCYLQDIACEGNLKHFLVAVVSLWVGAV 180

Query: 181 ISSWSNFITVLYVGFVAAHTLPILYEKYEDEVDTFAFNVFDQLCGHFQKLDSNVLSKIPR 240
           ISSW NF+TVLY+GFVAAHTLPILYEKYEDEVDTFA+ VFDQLCGH+QK DS+VLSKIPR
Sbjct: 181 ISSWCNFVTVLYIGFVAAHTLPILYEKYEDEVDTFAYKVFDQLCGHYQKFDSSVLSKIPR 240

Query: 241 GGPLPEKKHE 245
           G     KK+E
Sbjct: 241 GA-FKGKKYE 249

[Close]

BLAST of Cp4.1LG14g03170 vs. TrEMBL
Match: B9S6H1_RICCO (Reticulon-like protein OS=Ricinus communis GN=RCOM_0536570 PE=4 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 3.5e-80
Identity = 157/248 (63.31%), Postives = 187/248 (75.40%), Query Frame = 1


Query: 1   MSENVTAKDLPQNFSEAPAERGHKAESVS----SSSSVPGRDKRIFGRKKSVHHLLGGGK 60
           M+E  TA+    N  E  A+   K +SVS     +SSV  R  R+FGR+K VHHLLGGGK
Sbjct: 1   MAEKKTAEKFLNNLVEVLADSVPKQKSVSFFEEETSSVTARFHRLFGRQKPVHHLLGGGK 60

Query: 61  SADVLLWKNKKISASVLTSATIIWILFEWLSYHFLTIVCFALVLGMLFQFIWTNTSGFLD 120
           SADVLLW+NKKISASVLT AT IWILFEWL+YHFLT+VC ALVLGML QF+WTN SG ++
Sbjct: 61  SADVLLWRNKKISASVLTGATAIWILFEWLNYHFLTLVCLALVLGMLAQFVWTNASGLVN 120

Query: 121 RTSSNVPHLDLPEELFVEIAVSFGAEANRALHFLQDIACNGDLKQFLGAVVSLWAGAVIS 180
           R+   VP L LP+E+FV I  S G E N AL FLQD++C G+LKQFL  V SLWA AVI 
Sbjct: 121 RSPPKVPRLVLPDEVFVSIGRSVGVEINHALQFLQDVSCGGNLKQFLVVVASLWASAVIG 180

Query: 181 SWSNFITVLYVGFVAAHTLPILYEKYEDEVDTFAFNVFDQLCGHFQKLDSNVLSKIPRGG 240
           SW NF+TVLY GFVAAHTLP+LYE+YED+VD F + V +QL GH++KLD+ +LSKIP+G 
Sbjct: 181 SWCNFLTVLYTGFVAAHTLPVLYERYEDQVDDFVYKVLEQLQGHYRKLDTGLLSKIPKGN 240

Query: 241 PLPEKKHE 245
            L  KKHE
Sbjct: 241 -LKGKKHE 247

[Close]

BLAST of Cp4.1LG14g03170 vs. TrEMBL
Match: A0A0B0PZ43_GOSAR (Reticulon-like protein OS=Gossypium arboreum GN=F383_14573 PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 1.0e-79
Identity = 151/249 (60.64%), Postives = 189/249 (75.90%), Query Frame = 1


Query: 1   MSENVTAKDLPQNFSEAPAERGHKAESVS-----SSSSVPGRDKRIFGRKKSVHHLLGGG 60
           M E +T +DL  N  E  A+   K +SVS      S+SV     R+FGR++ VHH+LGGG
Sbjct: 1   MPEKITTEDLFNNLVETIADGVSKQKSVSFFEEEKSNSVVSGFNRLFGRQRPVHHILGGG 60

Query: 61  KSADVLLWKNKKISASVLTSATIIWILFEWLSYHFLTIVCFALVLGMLFQFIWTNTSGFL 120
           KSADVLLW+NKKISAS L SAT+IW+LFEWL+YHFLT++CFALVLGML QF+W+N SG L
Sbjct: 61  KSADVLLWRNKKISASFLASATLIWVLFEWLNYHFLTLLCFALVLGMLAQFVWSNASGLL 120

Query: 121 DRTSSNVPHLDLPEELFVEIAVSFGAEANRALHFLQDIACNGDLKQFLGAVVSLWAGAVI 180
           +R+SS VP L LP+ELFV I  S GAE NR L +LQD+AC G+LKQFL   VSLW  AV+
Sbjct: 121 NRSSSQVPRLVLPDELFVSIGRSVGAEVNRGLQYLQDVACQGNLKQFLVVAVSLWVAAVV 180

Query: 181 SSWSNFITVLYVGFVAAHTLPILYEKYEDEVDTFAFNVFDQLCGHFQKLDSNVLSKIPRG 240
            SW NF+TVLY+GFVAAHTLP+LYE+Y++++D F +N+ DQ   H++KLDS VLSKIP+ 
Sbjct: 181 GSWCNFLTVLYIGFVAAHTLPVLYERYDEQIDGFVYNMLDQFQNHYKKLDSGVLSKIPK- 240

Query: 241 GPLPEKKHE 245
           G    KKH+
Sbjct: 241 GKFKLKKHD 248

[Close]

BLAST of Cp4.1LG14g03170 vs. TrEMBL
Match: A0A067KVK1_JATCU (Reticulon-like protein OS=Jatropha curcas GN=JCGZ_10290 PE=4 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 1.3e-79
Identity = 156/248 (62.90%), Postives = 188/248 (75.81%), Query Frame = 1


Query: 1   MSENVTAKDLPQNFSEAPAERGHKAESVS----SSSSVPGRDKRIFGRKKSVHHLLGGGK 60
           M+E +TA+ +  N  E  A+   K +SVS     SSSV  R  R+FGR+K VHHLLGGGK
Sbjct: 1   MAEKITAEKIFNNLVETLADSVPKQKSVSFFEEESSSVTSRFNRLFGRQKPVHHLLGGGK 60

Query: 61  SADVLLWKNKKISASVLTSATIIWILFEWLSYHFLTIVCFALVLGMLFQFIWTNTSGFLD 120
           SADVLLW+NKKISASVLT AT IW+LFEWL+YHFLT+VC ALVLGML QF+W N SG L+
Sbjct: 61  SADVLLWRNKKISASVLTVATAIWVLFEWLNYHFLTLVCLALVLGMLTQFVWKNASGLLN 120

Query: 121 RTSSNVPHLDLPEELFVEIAVSFGAEANRALHFLQDIACNGDLKQFLGAVVSLWAGAVIS 180
            + S VP L +P+ELFV I  S G E NRAL FLQD++  G+LKQFL  + SLWA AVI 
Sbjct: 121 VSPSKVPRLVVPDELFVSIGRSIGLEVNRALRFLQDVSSGGNLKQFLLVIASLWAAAVIG 180

Query: 181 SWSNFITVLYVGFVAAHTLPILYEKYEDEVDTFAFNVFDQLCGHFQKLDSNVLSKIPRGG 240
           SW NF+TV+Y+GFVAAHTLP+LYE+YED+VD F + V +QL GH++KLDS  LSKIP+ G
Sbjct: 181 SWCNFLTVMYIGFVAAHTLPVLYERYEDQVDDFVYKVLEQLQGHYRKLDSGFLSKIPK-G 240

Query: 241 PLPEKKHE 245
            L  KKHE
Sbjct: 241 RLKGKKHE 247

[Close]

BLAST of Cp4.1LG14g03170 vs. TrEMBL
Match: B9GSR1_POPTR (Reticulon-like protein OS=Populus trichocarpa GN=POPTR_0002s05650g PE=4 SV=2)

HSP 1 Score: 303.9 bits (777), Expect = 1.8e-79
Identity = 151/248 (60.89%), Postives = 186/248 (75.00%), Query Frame = 1


Query: 1   MSENVTAKDLPQNFSEAPAERGHKAESVS----SSSSVPGRDKRIFGRKKSVHHLLGGGK 60
           M E +TA++L  N  E  A+   K +SVS       SV  R  R+FGR+K VHH+LGGGK
Sbjct: 1   MPEKITAENLFSNLVETIADNVPKQKSVSFFEEGEESVTSRINRLFGRQKPVHHILGGGK 60

Query: 61  SADVLLWKNKKISASVLTSATIIWILFEWLSYHFLTIVCFALVLGMLFQFIWTNTSGFLD 120
           SADVLLW+NKKISA VLT AT IW+LFEWL+YH L++VCFAL LGML QF+W N SG ++
Sbjct: 61  SADVLLWRNKKISAGVLTGATAIWVLFEWLNYHLLSLVCFALALGMLAQFVWINASGLMN 120

Query: 121 RTSSNVPHLDLPEELFVEIAVSFGAEANRALHFLQDIACNGDLKQFLGAVVSLWAGAVIS 180
           R+ S VP L LP+++FV I  S GAE NRAL FLQD++C G+LKQFL A+VSLW  A+I 
Sbjct: 121 RSPSQVPRLVLPDDIFVSIGRSIGAEVNRALLFLQDLSCGGNLKQFLAAIVSLWVAAIIG 180

Query: 181 SWSNFITVLYVGFVAAHTLPILYEKYEDEVDTFAFNVFDQLCGHFQKLDSNVLSKIPRGG 240
           SW NF+TV+Y+GFVAAHTLP+LYE+YED+VD F F  FDQL  ++QKLD+ VL KIP+ G
Sbjct: 181 SWCNFLTVMYIGFVAAHTLPVLYERYEDQVDDFVFKAFDQLRNNYQKLDAGVLGKIPK-G 240

Query: 241 PLPEKKHE 245
               KKHE
Sbjct: 241 KFNGKKHE 247

[Close]

BLAST of Cp4.1LG14g03170 vs. TAIR10
Match: AT3G10260.3 (AT3G10260.3 Reticulon family protein)

HSP 1 Score: 272.7 bits (696), Expect = 2.2e-73
Identity = 127/227 (55.95%), Postives = 169/227 (74.45%), Query Frame = 1


Query: 9   DLPQNFSEAPAERGHKAESVSSSSSVPGRDKRIFGRKKSVHHLLGGGKSADVLLWKNKKI 68
           DL  NF+E   +  H +       SV  R  R+F R+K +HH+LGGGKSADVLLW+NKKI
Sbjct: 33  DLVDNFTETVQKNKHGSSFFEQEDSVSSRFNRLFDRQKPIHHVLGGGKSADVLLWRNKKI 92

Query: 69  SASVLTSATIIWILFEWLSYHFLTIVCFALVLGMLFQFIWTNTSGFLDRTSSNVPHLDLP 128
           SASVL  AT IW+LFEW+++HFL++VC+AL+LGM+ QF+W+N SGFL+R+ S VP L LP
Sbjct: 93  SASVLMGATAIWVLFEWINFHFLSLVCYALLLGMIAQFVWSNASGFLNRSQSRVPRLVLP 152

Query: 129 EELFVEIAVSFGAEANRALHFLQDIACNGDLKQFLGAVVSLWAGAVISSWSNFITVLYVG 188
           ++ F E+ V+ G E NR L FLQD+AC G+LKQFL AV+ LW  A++ S  NF+TVLY+G
Sbjct: 153 KDFFAEVGVAVGKEVNRGLLFLQDLACKGNLKQFLMAVIGLWVAAMVGSCCNFLTVLYIG 212

Query: 189 FVAAHTLPILYEKYEDEVDTFAFNVFDQLCGHFQKLDSNVLSKIPRG 236
           FV AHT+P+LYE+YEDEVD F  ++  +   H++KLD+  LS+IP G
Sbjct: 213 FVGAHTMPVLYERYEDEVDGFMDSMIMKFHSHYKKLDTGFLSRIPSG 259

[Close]

BLAST of Cp4.1LG14g03170 vs. TAIR10
Match: AT2G46170.1 (AT2G46170.1 Reticulon family protein)

HSP 1 Score: 187.6 bits (475), Expect = 9.3e-48
Identity = 102/245 (41.63%), Postives = 152/245 (62.04%), Query Frame = 1


Query: 1   MSENVTAKDLP--QNFSEAPAERGHKAESVSSS----------SSVPGRDKRIFGRKKSV 60
           M+E +  K +P  ++  E  +E+ H  +S SSS          S+V  +  R+FGR+K V
Sbjct: 1   MAEEIE-KSVPTEESLMEKISEKIHHHDSSSSSESEYEKPDSPSAVKAKIYRMFGREKPV 60

Query: 61  HHLLGGGKSADVLLWKNKKISASVLTSATIIWILFEWLSYHFLTIVCFALVLGMLFQFIW 120
           H +LGGGK ADV LW++KK+S +VL  AT IW+LFE + YH L+++C   +L +   F+W
Sbjct: 61  HKVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFLW 120

Query: 121 TNTSGFLDRTSSNVPHLDLPEELFVEIAVSFGAEANRALHFLQDIACNGDLKQFLGAVVS 180
           +N    +++TS  +P + +PEE F+ +A S   E N+A   L+ IA   DLK+FL  VV 
Sbjct: 121 SNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVVG 180

Query: 181 LWAGAVISSWSNFITVLYVGFVAAHTLPILYEKYEDEVDTFAFNVFDQLCGHFQKLDSNV 234
           LW  +V+ +W NF+T++Y+ FV  HT+P+LYEK+ED+VD  A     +L   +   D  V
Sbjct: 181 LWIISVVGNWFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVVFDEKV 240

[Close]

BLAST of Cp4.1LG14g03170 vs. TAIR10
Match: AT4G11220.1 (AT4G11220.1 VIRB2-interacting protein 2)

HSP 1 Score: 183.7 bits (465), Expect = 1.3e-46
Identity = 85/230 (36.96%), Postives = 142/230 (61.74%), Query Frame = 1


Query: 15  SEAPAERGHKAESVSSSSSVPGRDKRIFGRKKSVHHLLGGGKSADVLLWKNKKISASVLT 74
           S +  +   K  S SS  S+  +  R+FGR++ VH +LGGGK AD+ +WK+KK+S  V  
Sbjct: 43  SSSSDDENEKKSSSSSPKSLKSKVYRLFGRERPVHKVLGGGKPADIFMWKDKKMSGGVFG 102

Query: 75  SATIIWILFEWLSYHFLTIVCFALVLGMLFQFIWTNTSGFLDRTSSNVPHLDLPEELFVE 134
            AT+ W+LFE + YH LT++C  +++ +   F+W+N + F+ ++   +P + +PEE  ++
Sbjct: 103 GATVAWVLFELMEYHLLTLLCHVMIVALAVLFLWSNATMFIHKSPPKIPEVHIPEEPLLQ 162

Query: 135 IAVSFGAEANRALHFLQDIACNGDLKQFLGAVVSLWAGAVISSWSNFITVLYVGFVAAHT 194
           +A     E NR +  L++IA   D+K+FL A+  LW  +++    +F+T+ Y+  V   T
Sbjct: 163 LASGLRIEINRGISSLREIASGRDIKKFLSAIAGLWVLSILGGCYSFLTLAYIALVLLFT 222

Query: 195 LPILYEKYEDEVDTFAFNVFDQLCGHFQKLDSNVLSKIPRGGPLPEKKHE 245
           +P+ Y+KYED+VD++      +L   +  LD+ V SKIPR GPL +KK +
Sbjct: 223 VPLFYDKYEDKVDSYGEKAMAELKKQYAVLDAKVFSKIPR-GPLKDKKKD 271

[Close]

BLAST of Cp4.1LG14g03170 vs. TAIR10
Match: AT4G23630.1 (AT4G23630.1 VIRB2-interacting protein 1)

HSP 1 Score: 177.2 bits (448), Expect = 1.3e-44
Identity = 88/230 (38.26%), Postives = 139/230 (60.43%), Query Frame = 1


Query: 15  SEAPAERGHKAESVSSSSSVPGRDKRIFGRKKSVHHLLGGGKSADVLLWKNKKISASVLT 74
           S+   E+    +  S SSS+  +  R+FGR++ VH +LGGGK AD+ +WKNKK+S  VL 
Sbjct: 47  SDDEDEKKKTKKPSSPSSSMKSKVYRLFGREQPVHKVLGGGKPADIFMWKNKKMSGGVLG 106

Query: 75  SATIIWILFEWLSYHFLTIVCFALVLGMLFQFIWTNTSGFLDRTSSNVPHLDLPEELFVE 134
            AT  W++FE + YH LT++C  +++ +   F+W+N + F++++   +P + +PEE  ++
Sbjct: 107 GATAAWVVFELMEYHLLTLLCHVMIVVLAVLFLWSNATMFINKSPPKIPEVHIPEEPILQ 166

Query: 135 IAVSFGAEANRALHFLQDIACNGDLKQFLGAVVSLWAGAVISSWSNFITVLYVGFVAAHT 194
           +A     E NR    L++IA   DLK+FL A+  LW  +++    NF+T+ Y+  V   T
Sbjct: 167 LASGLRIEINRGFSSLREIASGRDLKKFLIAIAGLWVLSILGGCFNFLTLAYIALVLLFT 226

Query: 195 LPILYEKYEDEVDTFAFNVFDQLCGHFQKLDSNVLSKIPRGGPLPEKKHE 245
           +P+ Y+KYED+VD        +L   +  LD  VLSKIP  GPL  KK +
Sbjct: 227 VPLAYDKYEDKVDPLGEKAMIELKKQYAVLDEKVLSKIPL-GPLKNKKKD 275

[Close]

BLAST of Cp4.1LG14g03170 vs. TAIR10
Match: AT5G41600.1 (AT5G41600.1 VIRB2-interacting protein 3)

HSP 1 Score: 172.2 bits (435), Expect = 4.0e-43
Identity = 87/223 (39.01%), Postives = 132/223 (59.19%), Query Frame = 1


Query: 24  KAESVSSSSSVPGRDKRIFGRKKSVHHLLGGGKSADVLLWKNKKISASVLTSATIIWILF 83
           K  + SSSSS   +  R+FGR+K VH +LGGGK AD+ LW+NKK+S  VL + T  W+LF
Sbjct: 35  KKSTSSSSSSFKSKIYRLFGREKPVHKVLGGGKPADIFLWRNKKVSGGVLGAVTASWVLF 94

Query: 84  EWLSYHFLTIVCFALVLGMLFQFIWTNTSGFLDRTSSNVPHLDLPEELFVEIAVSFGAEA 143
           E   YH L  +C   +  +   F+W+N   F+ +++ ++P + +PE+  +++      E 
Sbjct: 95  ELFEYHLLAFLCHFAIFALAALFLWSNACTFIHKSTPHIPEVHIPEDPILQLVSGLRIEI 154

Query: 144 NRALHFLQDIACNGDLKQFLGAVVSLWAGAVISSWSNFITVLYVGFVAAHTLPILYEKYE 203
           NR L  L++IA   D+K+F+  +  LW  ++I S  NF+T+ Y   V   T+P+LYEKYE
Sbjct: 155 NRGLTLLRNIASGKDVKKFILVIAGLWVLSIIGSCYNFLTLFYTATVLLFTIPVLYEKYE 214

Query: 204 DEVDTFAFNVFDQLCGHFQKLDSNVL----SKIPRGGPLPEKK 243
           D+VD +      ++   +  LD  VL    SKIPRG  L +KK
Sbjct: 215 DKVDAYGEKAMREIKKQYAVLDEKVLRKVISKIPRGA-LNKKK 256

[Close]

BLAST of Cp4.1LG14g03170 vs. NCBI nr
Match: gi|778691333|ref|XP_011653261.1| (PREDICTED: reticulon-like protein B8 [Cucumis sativus])

HSP 1 Score: 357.8 bits (917), Expect = 1.5e-95
Identity = 184/250 (73.60%), Postives = 208/250 (83.20%), Query Frame = 1


Query: 1   MSENVTAKDLPQNFSEAPAERGHKAESVS------SSSSVPGRDKRIFGRKKSVHHLLGG 60
           MSE +TA+D   N SE   E G K +SVS       SSSV G+  RIFGR+K V++LLGG
Sbjct: 1   MSEKMTAEDFINNISEVLTEHGQKGKSVSFFGEDSKSSSVAGQINRIFGRQKPVYNLLGG 60

Query: 61  GKSADVLLWKNKKISASVLTSATIIWILFEWLSYHFLTIVCFALVLGMLFQFIWTNTSGF 120
           GKSADVLLW+NKKISASVLT ATIIW+LFEWL+YHFLT+VCFALVLGML QF+WTN SGF
Sbjct: 61  GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQFMWTNASGF 120

Query: 121 LDRTSSNVPHLDLPEELFVEIAVSFGAEANRALHFLQDIACNGDLKQFLGAVVSLWAGAV 180
           L+R+SSNVP L LP+ELFV IAV+FGAE NRAL +LQDIAC G+LK FL AVVSLW GAV
Sbjct: 121 LNRSSSNVPRLVLPKELFVNIAVTFGAEVNRALCYLQDIACEGNLKHFLVAVVSLWVGAV 180

Query: 181 ISSWSNFITVLYVGFVAAHTLPILYEKYEDEVDTFAFNVFDQLCGHFQKLDSNVLSKIPR 240
           ISSW NF+TVLY+GFVAAHTLPILYEKYEDEVDTFA+ VFDQLCGH+QK DS+VLSKIPR
Sbjct: 181 ISSWCNFVTVLYIGFVAAHTLPILYEKYEDEVDTFAYKVFDQLCGHYQKFDSSVLSKIPR 240

Query: 241 GGPLPEKKHE 245
           G     KK+E
Sbjct: 241 GA-FKGKKYE 249

[Close]

BLAST of Cp4.1LG14g03170 vs. NCBI nr
Match: gi|659101885|ref|XP_008451843.1| (PREDICTED: reticulon-like protein B8 isoform X2 [Cucumis melo])

HSP 1 Score: 355.1 bits (910), Expect = 9.5e-95
Identity = 184/250 (73.60%), Postives = 209/250 (83.60%), Query Frame = 1


Query: 1   MSENVTAKDLPQNFSEAPAERGHKAESVS------SSSSVPGRDKRIFGRKKSVHHLLGG 60
           MSE + A+DL  N SE  AE G K +SVS       +SSV G+  RIFGR+K V++LLGG
Sbjct: 4   MSEKMIAEDLFNNISEVLAEHGQKGKSVSFFGEDNKASSVAGQINRIFGRQKPVYNLLGG 63

Query: 61  GKSADVLLWKNKKISASVLTSATIIWILFEWLSYHFLTIVCFALVLGMLFQFIWTNTSGF 120
           GKSADVLLW+NKKISASVLT ATIIW+LFEWL+YHFLT+VCFALVLGML QFIWTN SGF
Sbjct: 64  GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQFIWTNASGF 123

Query: 121 LDRTSSNVPHLDLPEELFVEIAVSFGAEANRALHFLQDIACNGDLKQFLGAVVSLWAGAV 180
           L+R+SSNVP L LP+ELFV IAV+FGAE NRAL +LQDIAC G+LK FL AV+SLW GAV
Sbjct: 124 LNRSSSNVPRLVLPKELFVNIAVTFGAEVNRALCYLQDIACEGNLKHFLVAVLSLWVGAV 183

Query: 181 ISSWSNFITVLYVGFVAAHTLPILYEKYEDEVDTFAFNVFDQLCGHFQKLDSNVLSKIPR 240
           ISSW NFITVLYVGFVAAHTLPILYEKYEDEVDTFA+ VFDQLCGH++K DS+VLSKIP+
Sbjct: 184 ISSWCNFITVLYVGFVAAHTLPILYEKYEDEVDTFAYKVFDQLCGHYRKFDSSVLSKIPK 243

Query: 241 GGPLPEKKHE 245
           G     KK+E
Sbjct: 244 GA-FKGKKYE 252

[Close]

BLAST of Cp4.1LG14g03170 vs. NCBI nr
Match: gi|659101883|ref|XP_008451841.1| (PREDICTED: reticulon-like protein B8 isoform X1 [Cucumis melo])

HSP 1 Score: 337.0 bits (863), Expect = 2.7e-89
Identity = 168/216 (77.78%), Postives = 191/216 (88.43%), Query Frame = 1


Query: 29  SSSSSVPGRDKRIFGRKKSVHHLLGGGKSADVLLWKNKKISASVLTSATIIWILFEWLSY 88
           + +SSV G+  RIFGR+K V++LLGGGKSADVLLW+NKKISASVLT ATIIW+LFEWL+Y
Sbjct: 53  NKASSVAGQINRIFGRQKPVYNLLGGGKSADVLLWRNKKISASVLTGATIIWVLFEWLNY 112

Query: 89  HFLTIVCFALVLGMLFQFIWTNTSGFLDRTSSNVPHLDLPEELFVEIAVSFGAEANRALH 148
           HFLT+VCFALVLGML QFIWTN SGFL+R+SSNVP L LP+ELFV IAV+FGAE NRAL 
Sbjct: 113 HFLTLVCFALVLGMLAQFIWTNASGFLNRSSSNVPRLVLPKELFVNIAVTFGAEVNRALC 172

Query: 149 FLQDIACNGDLKQFLGAVVSLWAGAVISSWSNFITVLYVGFVAAHTLPILYEKYEDEVDT 208
           +LQDIAC G+LK FL AV+SLW GAVISSW NFITVLYVGFVAAHTLPILYEKYEDEVDT
Sbjct: 173 YLQDIACEGNLKHFLVAVLSLWVGAVISSWCNFITVLYVGFVAAHTLPILYEKYEDEVDT 232

Query: 209 FAFNVFDQLCGHFQKLDSNVLSKIPRGGPLPEKKHE 245
           FA+ VFDQLCGH++K DS+VLSKIP+G     KK+E
Sbjct: 233 FAYKVFDQLCGHYRKFDSSVLSKIPKGA-FKGKKYE 267

[Close]

BLAST of Cp4.1LG14g03170 vs. NCBI nr
Match: gi|764611730|ref|XP_011467620.1| (PREDICTED: reticulon-like protein B8 isoform X2 [Fragaria vesca subsp. vesca])

HSP 1 Score: 310.1 bits (793), Expect = 3.5e-81
Identity = 159/249 (63.86%), Postives = 192/249 (77.11%), Query Frame = 1


Query: 1   MSENVTAKDLPQNFSEAPAERGHKAESV-----SSSSSVPGRDKRIFGRKKSVHHLLGGG 60
           M E +T +DL  N     AE   K +SV       S SV  +  R+FGR+K VHHLLGGG
Sbjct: 1   MPEKITPEDLLNNIVGL-AENSSKQKSVPFFGDDKSDSVSSQLNRLFGRQKPVHHLLGGG 60

Query: 61  KSADVLLWKNKKISASVLTSATIIWILFEWLSYHFLTIVCFALVLGMLFQFIWTNTSGFL 120
           KSADVLLW+NKKISASVLT AT IW+LFEWL+YHFLT+V FALVLGML QFIW+N SGF+
Sbjct: 61  KSADVLLWRNKKISASVLTGATFIWVLFEWLNYHFLTLVGFALVLGMLAQFIWSNFSGFV 120

Query: 121 DRTSSNVPHLDLPEELFVEIAVSFGAEANRALHFLQDIACNGDLKQFLGAVVSLWAGAVI 180
           +R+SS VP L LPEELFV IA+S GAE NR L F+QD+AC G+LKQFL  V SLWA +VI
Sbjct: 121 NRSSSKVPRLVLPEELFVNIAISIGAEINRGLEFIQDVACGGNLKQFLVVVASLWAASVI 180

Query: 181 SSWSNFITVLYVGFVAAHTLPILYEKYEDEVDTFAFNVFDQLCGHFQKLDSNVLSKIPRG 240
            SW NF+TVLY+GFVAAHTLP+LYE+Y D++D F ++VF QL  H++KLDS+VLS+IP+G
Sbjct: 181 GSWCNFLTVLYIGFVAAHTLPVLYERYGDQIDDFVYSVFGQLQNHYRKLDSSVLSRIPKG 240

Query: 241 GPLPEKKHE 245
             L  KKH+
Sbjct: 241 N-LKAKKHD 247

[Close]

BLAST of Cp4.1LG14g03170 vs. NCBI nr
Match: gi|255561156|ref|XP_002521590.1| (PREDICTED: reticulon-like protein B8 [Ricinus communis])

HSP 1 Score: 306.2 bits (783), Expect = 5.1e-80
Identity = 157/248 (63.31%), Postives = 187/248 (75.40%), Query Frame = 1


Query: 1   MSENVTAKDLPQNFSEAPAERGHKAESVS----SSSSVPGRDKRIFGRKKSVHHLLGGGK 60
           M+E  TA+    N  E  A+   K +SVS     +SSV  R  R+FGR+K VHHLLGGGK
Sbjct: 1   MAEKKTAEKFLNNLVEVLADSVPKQKSVSFFEEETSSVTARFHRLFGRQKPVHHLLGGGK 60

Query: 61  SADVLLWKNKKISASVLTSATIIWILFEWLSYHFLTIVCFALVLGMLFQFIWTNTSGFLD 120
           SADVLLW+NKKISASVLT AT IWILFEWL+YHFLT+VC ALVLGML QF+WTN SG ++
Sbjct: 61  SADVLLWRNKKISASVLTGATAIWILFEWLNYHFLTLVCLALVLGMLAQFVWTNASGLVN 120

Query: 121 RTSSNVPHLDLPEELFVEIAVSFGAEANRALHFLQDIACNGDLKQFLGAVVSLWAGAVIS 180
           R+   VP L LP+E+FV I  S G E N AL FLQD++C G+LKQFL  V SLWA AVI 
Sbjct: 121 RSPPKVPRLVLPDEVFVSIGRSVGVEINHALQFLQDVSCGGNLKQFLVVVASLWASAVIG 180

Query: 181 SWSNFITVLYVGFVAAHTLPILYEKYEDEVDTFAFNVFDQLCGHFQKLDSNVLSKIPRGG 240
           SW NF+TVLY GFVAAHTLP+LYE+YED+VD F + V +QL GH++KLD+ +LSKIP+G 
Sbjct: 181 SWCNFLTVLYTGFVAAHTLPVLYERYEDQVDDFVYKVLEQLQGHYRKLDTGLLSKIPKGN 240

Query: 241 PLPEKKHE 245
            L  KKHE
Sbjct: 241 -LKGKKHE 247

The following BLAST results are available for this feature:

BLAST of Cp4.1LG14g03170 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RTNLH_ARATH	3.9e-72	55.95	Reticulon-like protein B8 OS=Arabidopsis thaliana GN=RTNLB8 PE=2 SV=1	[more]
RTNLE_ARATH	1.6e-46	41.63	Reticulon-like protein B5 OS=Arabidopsis thaliana GN=RTNLB5 PE=1 SV=1	[more]
RTNLF_ARATH	2.4e-45	41.38	Reticulon-like protein B6 OS=Arabidopsis thaliana GN=RTNLB6 PE=1 SV=1	[more]
RTNLB_ARATH	2.4e-45	36.96	Reticulon-like protein B2 OS=Arabidopsis thaliana GN=RTNLB2 PE=1 SV=1	[more]
RTNLA_ARATH	2.2e-43	38.26	Reticulon-like protein B1 OS=Arabidopsis thaliana GN=RTNLB1 PE=1 SV=1	[more]

BLAST of Cp4.1LG14g03170 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXG6_CUCSA	1.0e-95	73.60	Reticulon-like protein OS=Cucumis sativus GN=Csa_4G063430 PE=4 SV=1	[more]
B9S6H1_RICCO	3.5e-80	63.31	Reticulon-like protein OS=Ricinus communis GN=RCOM_0536570 PE=4 SV=1	[more]
A0A0B0PZ43_GOSAR	1.0e-79	60.64	Reticulon-like protein OS=Gossypium arboreum GN=F383_14573 PE=4 SV=1	[more]
A0A067KVK1_JATCU	1.3e-79	62.90	Reticulon-like protein OS=Jatropha curcas GN=JCGZ_10290 PE=4 SV=1	[more]
B9GSR1_POPTR	1.8e-79	60.89	Reticulon-like protein OS=Populus trichocarpa GN=POPTR_0002s05650g PE=4 SV=2	[more]

BLAST of Cp4.1LG14g03170 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G10260.3	2.2e-73	55.95	Reticulon family protein	[more]
AT2G46170.1	9.3e-48	41.63	Reticulon family protein	[more]
AT4G11220.1	1.3e-46	36.96	VIRB2-interacting protein 2	[more]
AT4G23630.1	1.3e-44	38.26	VIRB2-interacting protein 1	[more]
AT5G41600.1	4.0e-43	39.01	VIRB2-interacting protein 3	[more]

BLAST of Cp4.1LG14g03170 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778691333\|ref\|XP_011653261.1\|	1.5e-95	73.60	PREDICTED: reticulon-like protein B8 [Cucumis sativus]	[more]
gi\|659101885\|ref\|XP_008451843.1\|	9.5e-95	73.60	PREDICTED: reticulon-like protein B8 isoform X2 [Cucumis melo]	[more]
gi\|659101883\|ref\|XP_008451841.1\|	2.7e-89	77.78	PREDICTED: reticulon-like protein B8 isoform X1 [Cucumis melo]	[more]
gi\|764611730\|ref\|XP_011467620.1\|	3.5e-81	63.86	PREDICTED: reticulon-like protein B8 isoform X2 [Fragaria vesca subsp. vesca]	[more]
gi\|255561156\|ref\|XP_002521590.1\|	5.1e-80	63.31	PREDICTED: reticulon-like protein B8 [Ricinus communis]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0009963	positive regulation of flavonoid biosynthetic process
biological_process	GO:0006612	protein targeting to membrane
biological_process	GO:0010363	regulation of plant-type hypersensitive response
biological_process	GO:0050789	regulation of biological process
biological_process	GO:0044763	single-organism cellular process
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0044425	membrane part
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016740	transferase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG14g03170.1	Cp4.1LG14g03170.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG14g03170	Cucsa.179920	Cucumber (Gy14) v1	cgycpeB0493
Cp4.1LG14g03170	CmaCh16G004780	Cucurbita maxima (Rimu)	cmacpeB344
Cp4.1LG14g03170	CmaCh04G006220	Cucurbita maxima (Rimu)	cmacpeB717
Cp4.1LG14g03170	CmoCh04G006690	Cucurbita moschata (Rifu)	cmocpeB670
Cp4.1LG14g03170	CmoCh16G005170	Cucurbita moschata (Rifu)	cmocpeB307
Cp4.1LG14g03170	Cla005430	Watermelon (97103) v1	cpewmB219
Cp4.1LG14g03170	Csa4G063430	Cucumber (Chinese Long) v2	cpecuB221
Cp4.1LG14g03170	MELO3C016191	Melon (DHL92) v3.5.1	cpemeB196
Cp4.1LG14g03170	ClCG07G010810	Watermelon (Charleston Gray)	cpewcgB209
Cp4.1LG14g03170	CSPI04G07270	Wild cucumber (PI 183967)	cpecpiB223
Cp4.1LG14g03170	Lsi07G008100	Bottle gourd (USVL1VR-Ls)	cpelsiB184
Cp4.1LG14g03170	MELO3C016191.2	Melon (DHL92) v3.6.1	cpemedB239
Cp4.1LG14g03170	CsaV3_4G007510	Cucumber (Chinese Long) v3	cpecucB0266
Cp4.1LG14g03170	Bhi01G002394	Wax gourd	cpewgoB0294
Cp4.1LG14g03170	CsGy4G007160	Cucumber (Gy14) v2	cgybcpeB487
Cp4.1LG14g03170	Carg11401	Silver-seed gourd	carcpeB0926
Cp4.1LG14g03170	Carg13123	Silver-seed gourd	carcpeB0058

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG14g03170	Cp4.1LG01g01010	Cucurbita pepo (Zucchini)	cpecpeB236

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG14g03170	Silver-seed gourd	carcpeB0057