CmaCh04G006220 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh04G006220
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Reticulon-like protein
Location	Cma_Chr04 : 3178937 .. 3181897 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACAGAAACAAACAAGAAAAAAAAAAAAAGAGAGGGAATTTTGCATCTGGGTTAGGTGGTGGCCCCTTTATAATTTCAGTATGTCAGCTTCGTCACGCCATTTCTCTGTGATATTTTAGAATCCCATGAACTCTTCCCTTCTTTATCCCGTTTTTCTGCAGTTCTGAACGGAAATTTTAAGAACCCATTTTCAGTTGTCTGTTCGGTTTCTTCTTCTCCAATCTATTCCTTGAAGACCCATTAGTCCCCTGCGCCTGGTTTGTTCTCTGGAGTTCTATTTTTGGGTTTGTTTTTTCGATCTTCTGCTTGTTTTGCGTTTCTCTTTCAGCGGATTATGTGTTTTATTATGCTTGTTTGATGCTTGAATGAGGTTGAATGCTGCTAGTTCTGCTTGATTTTCTGGGTTGTTGGAGTTTTGCTCCCTTACTTCTGCTCTAATCTTACTAGACGACCTACTTATCCCTTACATCTGCTTCATTTTTCTCTTTACAAACTCTATCTTGTATAACTGCGGCTGAATTTCTGGTTGAATCTGGAGTTTATAATGCTTTACTGAGGTTTTTCTCTTGTTTTTGCTTGTATCTGGGTTGAAACGTTGGATCACTTTTGCTTTTGAGTTGAAAGTTTTGGTAAAAGTTTGTGTTCCTTCCTATTTTATGACCATTTGGCCTTTTGGTTTCCTTATGCTTCTTGGTCAGTTTTGATCAGCTGTTTTGTATTATAAAAGATTGTTGGTGCTTTTGAATGTCTGTTGTTGAATCATCAGAATTCAAAAACTTTTACTAAGCTTTAGTTTGATGATTAGCTTGGACTAGAGAAATTAACTGTAATAGTTTTCTCCCATTGAGGGCTTTCTTCATCCCCTTGAGTTCGTAACTATAACGGCCCACGCCCACCGCTAGTAGATATTGTCCTCTTTAGACTTTCCCTTTCGAGTTTTCCCTCAAAAATTTTTAAAGTTGTATGATTGTTATCGAAAGATCTCCTATCAAAGTTGCTATTTAGAGATCTTAATTGTAGAAGATGCTCCTAAAATGTGATCCTGGAGCTTATACATAGATTTGCTTCTTTACCCATATGATTACTGTAGTTTTCATGTTATTATATAACTAACCATCTTCTTGGTGAACAACCTAGTCCTGAACTGTGGCTCCCTTTTTTTTGTTATTTCTTTTCTGAAGCACAAGAACTATGTCTGAGAGGATAACTGCTGAGGAGATTCTTAGTAATATCTCTGAAGTTCTTGCTGAACATGGCCAAAAGGCGAAATCAGTATCGTTTTTCGGGGAAGATAGTAAATCGAGTTCAGTGACTGGTCAGATCAAGCGGATATTCGGACGCCAAAAGCCCGTTTACCATATTCTTGGGGGTGGAAAATGTATCTCCTTGTTTAACTATTCTTAGTATTTTACATCCTCTATAATCTTCTTTTTCATGTCATAAATCATATTATTTCATTTTGATTTGTAGCTGCTGATGTGCTGCTATGGAGGAACAAGAAAATCTCAGCTAGTGTTTTGACTGGTGCAACTATTATATGGGTGTTGTTTGAATGGCTTAATTACCACTTCTTGACTCTGCTTTGCTTTGCTTTGGTTCTTGGTATGTTGGCTCAGTTCATATGGACAAGTGCCTCAGGATATATGAGCAGGTGATTGAAAAATAGATATCTATGCCTTTGTTTTACGTTGATTTTGATGGGTTTTCTGGTTTAATGAATGTAGATGCAGTCTTTAACATATATTTGGTGCTTTCGCAGATCATCGTCGTCGTCGAAAGTTCCTCGAATTGTTCTTCCTGATGAACTATTTGTCAATATTGCTGTCTCATTTGGTGCTGAGGTTAACCGAGCTCTGGGTGTTCTCCAAGATATTGCTTGTGAAGGAAATTTCAAACACTTACTTGTGGTATGATAATATATTCTAGTTGTTTCTTTGATATAAGTGCTTAGGAAACCTGTTTAGATTTTGTGGAAGATGGCTTCTTTTATTAATGTGAATATATTTGCAGGCCGTAGTAAGCTTGTGGGCTGGTGCTGTGATCAGTAGCTGGTGCAATTTCATTACTGTCTTGTATATTGGTAAGTTCTTACAGATTCTGCATTTCTAAACATTTACATGTTTGATTTCTTTGATGATCCATGTCTATATTATTTAGATACAAGTGTTTTGAGTTTTCTTGCTTTTTTGTTGGAGGGGCTTGGTTTATAGGATCTATACCGCTAACAAATATTATCTTATTTGGGCTTCCTTCAAGATTTTTAAAATGCGTTTGTTAGGGAGAGGTTTCCACACCACACTCTTATAAATAATGTGTTGTTCCCCTCTCCGAAAAGGAAAGTCCAAAGAGGACAATATCTGTTTGCGGTGGAGTTGGGTTGTTAGAGGATGGAAACTTTTTGATAGACCAACCATAGGAGATCCTATGTTCTTAGGAAAATATAAAATCATCCATTTTCACCATTAGCATGTTTCAAATATGTTCAGGTTTCGTTGCTGCCCATACGCTTCCAATTCTGTACGAGAAATATGAAGATGAAGTTGATACCTTTGCATACAAGGTTATCGACCAACTCCGCGGTCAGTATCAAAAGCTCGATTCCAGTGTGCTTAGCAAGATCCCTAAAGGATCGTTCAAGGGAAAGAAGTATGAATAGATCATTTTGAACTCAGCAAACAAAATACCTAAACCATCTCTAGTTGTTGAAGGAGTTGGTTGTGTATCATAAGAATGGGAAAATATTATCCCTTTCAGCTAAGTAGTTGTAGGCTAAGAAGTTTGTATTTGCCATTCAGCTGAACCAGAAGCCATCTTTGACTGATTTTTGCAGCCATTGGCTTAAATATTAGAACTGCTTCAGATGCATATCCTTTTAACTTCAGCATATGGAATGCTGTTTGAAGCTTCCTTTGCCCAAAAGGAAGATTTATATTTTAACCATTTCCGATGCCTTTTTCC

mRNA sequence

ATGAACAGAAACAAACAAGAAAAAAAAAAAAAGAGAGGGAATTTTGCATCTGGGTTAGAACCCATTTTCAGTTGTCTGTTCGGTTTCTTCTTCTCCAATCTATTCCTTGAAGACCCATTAGTCCCCTGCGCCTGCACAAGAACTATGTCTGAGAGGATAACTGCTGAGGAGATTCTTAGTAATATCTCTGAAGTTCTTGCTGAACATGGCCAAAAGGCGAAATCAGTATCGTTTTTCGGGGAAGATAGTAAATCGAGTTCAGTGACTGGTCAGATCAAGCGGATATTCGGACGCCAAAAGCCCGTTTACCATATTCTTGGGGGTGGAAAATCTGCTGATGTGCTGCTATGGAGGAACAAGAAAATCTCAGCTAGTGTTTTGACTGGTGCAACTATTATATGGGTGTTGTTTGAATGGCTTAATTACCACTTCTTGACTCTGCTTTGCTTTGCTTTGGTTCTTGGTATGTTGGCTCAGTTCATATGGACAAGTGCCTCAGGATATATGAGCAGATCATCGTCGTCGTCGAAAGTTCCTCGAATTGTTCTTCCTGATGAACTATTTGTCAATATTGCTGTCTCATTTGGTGCTGAGGTTAACCGAGCTCTGGGTGTTCTCCAAGATATTGCTTGTGAAGGAAATTTCAAACACTTACTTGTGGCCGTAGTAAGCTTGTGGGCTGGTGCTGTGATCAGTAGCTGGTGCAATTTCATTACTGTCTTGTATATTGGTTTCGTTGCTGCCCATACGCTTCCAATTCTGTACGAGAAATATGAAGATGAAGTTGATACCTTTGCATACAAGGTTATCGACCAACTCCGCGGTCAGTATCAAAAGCTCGATTCCAGTGTGCTTAGCAAGATCCCTAAAGGATCGTTCAAGGGAAAGAAGTATGAATAGATCATTTTGAACTCAGCAAACAAAATACCTAAACCATCTCTAGTTGTTGAAGGAGTTGGTTGTGTATCATAAGAATGGGAAAATATTATCCCTTTCAGCTAAGTAGTTGTAGGCTAAGAAGTTTGTATTTGCCATTCAGCTGAACCAGAAGCCATCTTTGACTGATTTTTGCAGCCATTGGCTTAAATATTAGAACTGCTTCAGATGCATATCCTTTTAACTTCAGCATATGGAATGCTGTTTGAAGCTTCCTTTGCCCAAAAGGAAGATTTATATTTTAACCATTTCCGATGCCTTTTTCC

Coding sequence (CDS)

ATGAACAGAAACAAACAAGAAAAAAAAAAAAAGAGAGGGAATTTTGCATCTGGGTTAGAACCCATTTTCAGTTGTCTGTTCGGTTTCTTCTTCTCCAATCTATTCCTTGAAGACCCATTAGTCCCCTGCGCCTGCACAAGAACTATGTCTGAGAGGATAACTGCTGAGGAGATTCTTAGTAATATCTCTGAAGTTCTTGCTGAACATGGCCAAAAGGCGAAATCAGTATCGTTTTTCGGGGAAGATAGTAAATCGAGTTCAGTGACTGGTCAGATCAAGCGGATATTCGGACGCCAAAAGCCCGTTTACCATATTCTTGGGGGTGGAAAATCTGCTGATGTGCTGCTATGGAGGAACAAGAAAATCTCAGCTAGTGTTTTGACTGGTGCAACTATTATATGGGTGTTGTTTGAATGGCTTAATTACCACTTCTTGACTCTGCTTTGCTTTGCTTTGGTTCTTGGTATGTTGGCTCAGTTCATATGGACAAGTGCCTCAGGATATATGAGCAGATCATCGTCGTCGTCGAAAGTTCCTCGAATTGTTCTTCCTGATGAACTATTTGTCAATATTGCTGTCTCATTTGGTGCTGAGGTTAACCGAGCTCTGGGTGTTCTCCAAGATATTGCTTGTGAAGGAAATTTCAAACACTTACTTGTGGCCGTAGTAAGCTTGTGGGCTGGTGCTGTGATCAGTAGCTGGTGCAATTTCATTACTGTCTTGTATATTGGTTTCGTTGCTGCCCATACGCTTCCAATTCTGTACGAGAAATATGAAGATGAAGTTGATACCTTTGCATACAAGGTTATCGACCAACTCCGCGGTCAGTATCAAAAGCTCGATTCCAGTGTGCTTAGCAAGATCCCTAAAGGATCGTTCAAGGGAAAGAAGTATGAATAG

Protein sequence

MNRNKQEKKKKRGNFASGLEPIFSCLFGFFFSNLFLEDPLVPCACTRTMSERITAEEILSNISEVLAEHGQKAKSVSFFGEDSKSSSVTGQIKRIFGRQKPVYHILGGGKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLLCFALVLGMLAQFIWTSASGYMSRSSSSSKVPRIVLPDELFVNIAVSFGAEVNRALGVLQDIACEGNFKHLLVAVVSLWAGAVISSWCNFITVLYIGFVAAHTLPILYEKYEDEVDTFAYKVIDQLRGQYQKLDSSVLSKIPKGSFKGKKYE

Homology

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BLAST of CmaCh04G006220 vs. Swiss-Prot
Match: RTNLH_ARATH (Reticulon-like protein B8 OS=Arabidopsis thaliana GN=RTNLB8 PE=2 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 1.6e-75
Identity = 139/251 (55.38%), Postives = 187/251 (74.50%), Query Frame = 1


Query: 49  MSERITAEEILSNISEVLAEHGQKAKSVSFFGEDSKSSSVTGQIKRIFGRQKPVYHILGG 108
           M ++   E+++ ++ +   E  QK K  S F E  +  SV+ +  R+F RQKP++H+LGG
Sbjct: 1   MPDKNIVEDVIGDLVDNFTETVQKNKHGSSFFE--QEDSVSSRFNRLFDRQKPIHHVLGG 60

Query: 109 GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLLCFALVLGMLAQFIWTSASGY 168
           GKSADVLLWRNKKISASVL GAT IWVLFEW+N+HFL+L+C+AL+LGM+AQF+W++ASG+
Sbjct: 61  GKSADVLLWRNKKISASVLMGATAIWVLFEWINFHFLSLVCYALLLGMIAQFVWSNASGF 120

Query: 169 MSRSSSSSKVPRIVLPDELFVNIAVSFGAEVNRALGVLQDIACEGNFKHLLVAVVSLWAG 228
           ++RS   S+VPR+VLP + F  + V+ G EVNR L  LQD+AC+GN K  L+AV+ LW  
Sbjct: 121 LNRSQ--SRVPRLVLPKDFFAEVGVAVGKEVNRGLLFLQDLACKGNLKQFLMAVIGLWVA 180

Query: 229 AVISSWCNFITVLYIGFVAAHTLPILYEKYEDEVDTFAYKVIDQLRGQYQKLDSSVLSKI 288
           A++ S CNF+TVLYIGFV AHT+P+LYE+YEDEVD F   +I +    Y+KLD+  LS+I
Sbjct: 181 AMVGSCCNFLTVLYIGFVGAHTMPVLYERYEDEVDGFMDSMIMKFHSHYKKLDTGFLSRI 240

Query: 289 PKGSFKGKKYE 300
           P G F  KK E
Sbjct: 241 PSGKFGLKKRE 247

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BLAST of CmaCh04G006220 vs. Swiss-Prot
Match: RTNLE_ARATH (Reticulon-like protein B5 OS=Arabidopsis thaliana GN=RTNLB5 PE=1 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 1.2e-51
Identity = 107/243 (44.03%), Postives = 158/243 (65.02%), Query Frame = 1


Query: 54  TAEEILSNISEVLAEHGQKAKSVSFFGEDSKSSSVTGQIKRIFGRQKPVYHILGGGKSAD 113
           T E ++  ISE +  H   + S S + +    S+V  +I R+FGR+KPV+ +LGGGK AD
Sbjct: 11  TEESLMEKISEKIHHHDSSSSSESEYEKPDSPSAVKAKIYRMFGREKPVHKVLGGGKPAD 70

Query: 114 VLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLLCFALVLGMLAQFIWTSASGYMSRSS 173
           V LWR+KK+S +VL  AT IWVLFE + YH L+LLC   +L +   F+W++A   +++  
Sbjct: 71  VFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFLWSNAHTLINK-- 130

Query: 174 SSSKVPRIVLPDELFVNIAVSFGAEVNRALGVLQDIACEGNFKHLLVAVVSLWAGAVISS 233
           +S ++P I +P+E F+ +A S   E+N+A  +L+ IA   + K  L+ VV LW  +V+ +
Sbjct: 131 TSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVVGLWIISVVGN 190

Query: 234 WCNFITVLYIGFVAAHTLPILYEKYEDEVDTFAYKVIDQLRGQYQKLDSSVLSKIPKGSF 293
           W NF+T++YI FV  HT+P+LYEK+ED+VD  A K + +L+ QY   D  VLSKIP  S 
Sbjct: 191 WFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVVFDEKVLSKIPIASL 250

Query: 294 KGK 297
           K K
Sbjct: 251 KAK 251

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BLAST of CmaCh04G006220 vs. Swiss-Prot
Match: RTNLF_ARATH (Reticulon-like protein B6 OS=Arabidopsis thaliana GN=RTNLB6 PE=1 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 2.2e-48
Identity = 100/241 (41.49%), Postives = 154/241 (63.90%), Query Frame = 1


Query: 56  EEILSNISEVLAEHGQKAKSVSFFGEDSKSSSVTGQIKRIFGRQKPVYHILGGGKSADVL 115
           E ++  I++ + +H   + S S   +    S++  +I R+FGR+KPV+ +LGGG  ADV 
Sbjct: 13  ESLMEKIADKIHDHDSSSSSDSEHEKPESPSALKAKIYRLFGREKPVHKVLGGGLPADVF 72

Query: 116 LWRNKKISASVLTGATIIWVLFEWLNYHFLTLLCFALVLGMLAQFIWTSASGYMSRSSSS 175
           LWR+KK+SASVL  AT IWVLFE + YHFL+L+C  L+  + A F+ ++A  +M++  + 
Sbjct: 73  LWRDKKLSASVLGVATAIWVLFELVEYHFLSLVCHILIFALAALFLLSNAHAFMNK--TP 132

Query: 176 SKVPRIVLPDELFVNIAVSFGAEVNRALGVLQDIACEGNFKHLLVAVVSLWAGAVISSWC 235
            K+P I + +E F+ I  +   E+N+A  +L+ IA   + K  L+ V  LW  +V+ +W 
Sbjct: 133 PKIPEIHIKEEHFLMIVSALRNELNQAFVILRSIALGRDLKKFLMVVFGLWIISVVGNWF 192

Query: 236 NFITVLYIGFVAAHTLPILYEKYEDEVDTFAYKVIDQLRGQYQKLDSSVLSKIPKGSFKG 295
           NF+T++YI FV  HT+P+LYEK+ED+VD  A K + +L+  Y   D  VLSK+P  S K 
Sbjct: 193 NFLTLVYICFVVLHTVPMLYEKHEDKVDPVAEKTLKELKKHYMVFDEKVLSKLPVASLKA 251

Query: 296 K 297
           K
Sbjct: 253 K 251

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BLAST of CmaCh04G006220 vs. Swiss-Prot
Match: RTNLC_ARATH (Reticulon-like protein B3 OS=Arabidopsis thaliana GN=RTNLB3 PE=2 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 3.7e-48
Identity = 98/242 (40.50%), Postives = 151/242 (62.40%), Query Frame = 1


Query: 56  EEILSNISEVLAEHGQKAKSVSFFGEDSKSSSVTGQIKRIFGRQKPVYHILGGGKSADVL 115
           E I+  ISE +  H   + S S   +D  S+S+  +I R+FGR++P++ + GGGK AD+ 
Sbjct: 9   ESIMEKISEKIHGHDDSSSSSSDSDDDKNSASLKTKIYRLFGREQPLHKLFGGGKPADIF 68

Query: 116 LWRNKKISASVLTGATIIWVLFEWLNYHFLTLLCFALVLGMLAQFIWTSASGYMSRSSSS 175
           LWRNKK+S  VL  AT+ W+LFE L Y+ LTL     +L +   F+W+SAS ++ +  S 
Sbjct: 69  LWRNKKVSGGVLGAATVSWILFELLEYNLLTLFGHISILALAVLFLWSSASTFIHK--SP 128

Query: 176 SKVPRIVLPDELFVNIAVSFGAEVNRALGVLQDIACEGNFKHLLVAVVSLWAGAVISSWC 235
             +P + +P+++ + +A     E+NR   VL+DIA   + K  L+ +  LW  + + S C
Sbjct: 129 LHIPEVHIPEDVVLQLASGLRIEINRGFTVLRDIASGRDLKKFLLVIAGLWVLSKVGSSC 188

Query: 236 NFITVLYIGFVAAHTLPILYEKYEDEVDTFAYKVIDQLRGQYQKLD----SSVLSKIPKG 294
           NF+T++YI  V   T+P+LYEKYED+VD F  K + +++ QY + D    S V+SKIPKG
Sbjct: 189 NFLTLIYIATVLLFTIPVLYEKYEDKVDDFGEKAMREIKKQYVEFDVKVLSKVMSKIPKG 248

[Close]

BLAST of CmaCh04G006220 vs. Swiss-Prot
Match: RTNLA_ARATH (Reticulon-like protein B1 OS=Arabidopsis thaliana GN=RTNLB1 PE=1 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 3.1e-47
Identity = 99/258 (38.37%), Postives = 155/258 (60.08%), Query Frame = 1


Query: 51  ERITAEEILSNISEVLAEHGQKAKSVSFFGED-----------SKSSSVTGQIKRIFGRQ 110
           E +  E ++  ISE +  HG  + S S   +D           S SSS+  ++ R+FGR+
Sbjct: 19  EVVERESLMDKISEKI-HHGGDSSSSSSSSDDEDEKKKTKKPSSPSSSMKSKVYRLFGRE 78

Query: 111 KPVYHILGGGKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLLCFALVLGMLAQ 170
           +PV+ +LGGGK AD+ +W+NKK+S  VL GAT  WV+FE + YH LTLLC  +++ +   
Sbjct: 79  QPVHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMIVVLAVL 138

Query: 171 FIWTSASGYMSRSSSSSKVPRIVLPDELFVNIAVSFGAEVNRALGVLQDIACEGNFKHLL 230
           F+W++A+ ++++  S  K+P + +P+E  + +A     E+NR    L++IA   + K  L
Sbjct: 139 FLWSNATMFINK--SPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLKKFL 198

Query: 231 VAVVSLWAGAVISSWCNFITVLYIGFVAAHTLPILYEKYEDEVDTFAYKVIDQLRGQYQK 290
           +A+  LW  +++    NF+T+ YI  V   T+P+ Y+KYED+VD    K + +L+ QY  
Sbjct: 199 IAIAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKKQYAV 258

Query: 291 LDSSVLSKIPKGSFKGKK 298
           LD  VLSKIP G  K KK
Sbjct: 259 LDEKVLSKIPLGPLKNKK 273

[Close]

BLAST of CmaCh04G006220 vs. TrEMBL
Match: A0A0A0KXG6_CUCSA (Reticulon-like protein OS=Cucumis sativus GN=Csa_4G063430 PE=4 SV=1)

HSP 1 Score: 428.3 bits (1100), Expect = 7.5e-117
Identity = 215/251 (85.66%), Postives = 234/251 (93.23%), Query Frame = 1


Query: 49  MSERITAEEILSNISEVLAEHGQKAKSVSFFGEDSKSSSVTGQIKRIFGRQKPVYHILGG 108
           MSE++TAE+ ++NISEVL EHGQK KSVSFFGEDSKSSSV GQI RIFGRQKPVY++LGG
Sbjct: 1   MSEKMTAEDFINNISEVLTEHGQKGKSVSFFGEDSKSSSVAGQINRIFGRQKPVYNLLGG 60

Query: 109 GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLLCFALVLGMLAQFIWTSASGY 168
           GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTL+CFALVLGMLAQF+WT+ASG+
Sbjct: 61  GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQFMWTNASGF 120

Query: 169 MSRSSSSSKVPRIVLPDELFVNIAVSFGAEVNRALGVLQDIACEGNFKHLLVAVVSLWAG 228
           ++RSSS+  VPR+VLP ELFVNIAV+FGAEVNRAL  LQDIACEGN KH LVAVVSLW G
Sbjct: 121 LNRSSSN--VPRLVLPKELFVNIAVTFGAEVNRALCYLQDIACEGNLKHFLVAVVSLWVG 180

Query: 229 AVISSWCNFITVLYIGFVAAHTLPILYEKYEDEVDTFAYKVIDQLRGQYQKLDSSVLSKI 288
           AVISSWCNF+TVLYIGFVAAHTLPILYEKYEDEVDTFAYKV DQL G YQK DSSVLSKI
Sbjct: 181 AVISSWCNFVTVLYIGFVAAHTLPILYEKYEDEVDTFAYKVFDQLCGHYQKFDSSVLSKI 240

Query: 289 PKGSFKGKKYE 300
           P+G+FKGKKYE
Sbjct: 241 PRGAFKGKKYE 249

[Close]

BLAST of CmaCh04G006220 vs. TrEMBL
Match: E0CU01_VITVI (Reticulon-like protein OS=Vitis vinifera GN=VIT_12s0028g01090 PE=4 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 3.3e-96
Identity = 175/251 (69.72%), Postives = 215/251 (85.66%), Query Frame = 1


Query: 49  MSERITAEEILSNISEVLAEHGQKAKSVSFFGEDSKSSSVTGQIKRIFGRQKPVYHILGG 108
           M E ITAE++L+NI E ++++ QK KSVSFF E+ KS+SVT Q KR+FGR+KPVY++LG 
Sbjct: 1   MPEGITAEKLLNNIMETISDNAQKKKSVSFF-EEEKSNSVTSQFKRLFGREKPVYNLLGA 60

Query: 109 GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLLCFALVLGMLAQFIWTSASGY 168
           GKSAD++LWRNKKISAS +TGAT+IWVLFEWLNYHFLTLLCFA+VLGM+AQF+W++ASG 
Sbjct: 61  GKSADLMLWRNKKISASFITGATLIWVLFEWLNYHFLTLLCFAVVLGMIAQFVWSNASGV 120

Query: 169 MSRSSSSSKVPRIVLPDELFVNIAVSFGAEVNRALGVLQDIACEGNFKHLLVAVVSLWAG 228
            SRSS  S+VPRIVLPDELF NI V+ G ++N+ALG LQD+AC GN K  L+ VVSLWA 
Sbjct: 121 FSRSS--SEVPRIVLPDELFQNIGVAVGVQINQALGFLQDVACGGNLKQFLLVVVSLWAA 180

Query: 229 AVISSWCNFITVLYIGFVAAHTLPILYEKYEDEVDTFAYKVIDQLRGQYQKLDSSVLSKI 288
           AVI SWCNF+TVLY+GF+AAHTLP+LYE+YED+VD F Y+V+ QL+  Y+KLDS  LSKI
Sbjct: 181 AVIGSWCNFLTVLYVGFIAAHTLPVLYERYEDQVDGFVYQVLGQLQHNYRKLDSGFLSKI 240

Query: 289 PKGSFKGKKYE 300
           PKGS KGKK+E
Sbjct: 241 PKGSLKGKKHE 248

[Close]

BLAST of CmaCh04G006220 vs. TrEMBL
Match: B9S6H1_RICCO (Reticulon-like protein OS=Ricinus communis GN=RCOM_0536570 PE=4 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 2.0e-93
Identity = 174/251 (69.32%), Postives = 210/251 (83.67%), Query Frame = 1


Query: 49  MSERITAEEILSNISEVLAEHGQKAKSVSFFGEDSKSSSVTGQIKRIFGRQKPVYHILGG 108
           M+E+ TAE+ L+N+ EVLA+   K KSVSFF E++  SSVT +  R+FGRQKPV+H+LGG
Sbjct: 1   MAEKKTAEKFLNNLVEVLADSVPKQKSVSFFEEET--SSVTARFHRLFGRQKPVHHLLGG 60

Query: 109 GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLLCFALVLGMLAQFIWTSASGY 168
           GKSADVLLWRNKKISASVLTGAT IW+LFEWLNYHFLTL+C ALVLGMLAQF+WT+ASG 
Sbjct: 61  GKSADVLLWRNKKISASVLTGATAIWILFEWLNYHFLTLVCLALVLGMLAQFVWTNASGL 120

Query: 169 MSRSSSSSKVPRIVLPDELFVNIAVSFGAEVNRALGVLQDIACEGNFKHLLVAVVSLWAG 228
           ++RS    KVPR+VLPDE+FV+I  S G E+N AL  LQD++C GN K  LV V SLWA 
Sbjct: 121 VNRSPP--KVPRLVLPDEVFVSIGRSVGVEINHALQFLQDVSCGGNLKQFLVVVASLWAS 180

Query: 229 AVISSWCNFITVLYIGFVAAHTLPILYEKYEDEVDTFAYKVIDQLRGQYQKLDSSVLSKI 288
           AVI SWCNF+TVLY GFVAAHTLP+LYE+YED+VD F YKV++QL+G Y+KLD+ +LSKI
Sbjct: 181 AVIGSWCNFLTVLYTGFVAAHTLPVLYERYEDQVDDFVYKVLEQLQGHYRKLDTGLLSKI 240

Query: 289 PKGSFKGKKYE 300
           PKG+ KGKK+E
Sbjct: 241 PKGNLKGKKHE 247

[Close]

BLAST of CmaCh04G006220 vs. TrEMBL
Match: A0A0L9UV16_PHAAN (Reticulon-like protein OS=Phaseolus angularis GN=LR48_Vigan07g029700 PE=4 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 9.9e-93
Identity = 177/251 (70.52%), Postives = 204/251 (81.27%), Query Frame = 1


Query: 49  MSERITAEEILSNISEVLAEHGQKAKSVSFFGEDSKSSSVTGQIKRIFGRQKPVYHILGG 108
           MSE+ITAE +L+ + E +AE   K KS SFF ED KSSSV+ Q  R+FGRQKPV+HILGG
Sbjct: 1   MSEKITAENLLNTLVETIAE---KQKSGSFFEED-KSSSVSSQFNRLFGRQKPVHHILGG 60

Query: 109 GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLLCFALVLGMLAQFIWTSASGY 168
           GKSADVLLWRNKKISASVL+ AT IWVLFEWLNY+FLTLL F L LGML QF+WT+ASG 
Sbjct: 61  GKSADVLLWRNKKISASVLSAATAIWVLFEWLNYNFLTLLFFVLALGMLGQFLWTNASGL 120

Query: 169 MSRSSSSSKVPRIVLPDELFVNIAVSFGAEVNRALGVLQDIACEGNFKHLLVAVVSLWAG 228
            SR  +  KVPR VLPD+ FVNIA + GAEVNR L  LQD++C GN K  L+AV+SLWAG
Sbjct: 121 FSRKPT--KVPRFVLPDDFFVNIATAVGAEVNRGLRFLQDVSCGGNLKQFLIAVLSLWAG 180

Query: 229 AVISSWCNFITVLYIGFVAAHTLPILYEKYEDEVDTFAYKVIDQLRGQYQKLDSSVLSKI 288
           AVI SWCNF+TV+YIGFVAAHTLP+ YE+YED+VD F YKV DQ++  YQKLDS +LSKI
Sbjct: 181 AVIGSWCNFLTVMYIGFVAAHTLPVFYERYEDQVDNFVYKVFDQMQNHYQKLDSGLLSKI 240

Query: 289 PKGSFKGKKYE 300
           PKG  KGKKYE
Sbjct: 241 PKGKVKGKKYE 245

[Close]

BLAST of CmaCh04G006220 vs. TrEMBL
Match: A0A0S3RJR0_PHAAN (Reticulon-like protein OS=Vigna angularis var. angularis GN=Vigan.03G042600 PE=4 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 9.9e-93
Identity = 177/251 (70.52%), Postives = 204/251 (81.27%), Query Frame = 1


Query: 49  MSERITAEEILSNISEVLAEHGQKAKSVSFFGEDSKSSSVTGQIKRIFGRQKPVYHILGG 108
           MSE+ITAE +L+ + E +AE   K KS SFF ED KSSSV+ Q  R+FGRQKPV+HILGG
Sbjct: 1   MSEKITAENLLNTLVETIAE---KQKSGSFFEED-KSSSVSSQFNRLFGRQKPVHHILGG 60

Query: 109 GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLLCFALVLGMLAQFIWTSASGY 168
           GKSADVLLWRNKKISASVL+ AT IWVLFEWLNY+FLTLL F L LGML QF+WT+ASG 
Sbjct: 61  GKSADVLLWRNKKISASVLSAATAIWVLFEWLNYNFLTLLFFVLALGMLGQFLWTNASGL 120

Query: 169 MSRSSSSSKVPRIVLPDELFVNIAVSFGAEVNRALGVLQDIACEGNFKHLLVAVVSLWAG 228
            SR  +  KVPR VLPD+ FVNIA + GAEVNR L  LQD++C GN K  L+AV+SLWAG
Sbjct: 121 FSRKPT--KVPRFVLPDDFFVNIATAVGAEVNRGLRFLQDVSCGGNLKQFLIAVLSLWAG 180

Query: 229 AVISSWCNFITVLYIGFVAAHTLPILYEKYEDEVDTFAYKVIDQLRGQYQKLDSSVLSKI 288
           AVI SWCNF+TV+YIGFVAAHTLP+ YE+YED+VD F YKV DQ++  YQKLDS +LSKI
Sbjct: 181 AVIGSWCNFLTVMYIGFVAAHTLPVFYERYEDQVDNFVYKVFDQMQNHYQKLDSGLLSKI 240

Query: 289 PKGSFKGKKYE 300
           PKG  KGKKYE
Sbjct: 241 PKGKVKGKKYE 245

[Close]

BLAST of CmaCh04G006220 vs. TAIR10
Match: AT3G10260.3 (AT3G10260.3 Reticulon family protein)

HSP 1 Score: 288.5 bits (737), Expect = 4.7e-78
Identity = 141/255 (55.29%), Postives = 189/255 (74.12%), Query Frame = 1


Query: 45  CTRTMSERITAEEILSNISEVLAEHGQKAKSVSFFGEDSKSSSVTGQIKRIFGRQKPVYH 104
           C R M ++   E+++ ++ +   E  QK K  S F E  +  SV+ +  R+F RQKP++H
Sbjct: 17  CFRIMPDKNIVEDVIGDLVDNFTETVQKNKHGSSFFE--QEDSVSSRFNRLFDRQKPIHH 76

Query: 105 ILGGGKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLLCFALVLGMLAQFIWTS 164
           +LGGGKSADVLLWRNKKISASVL GAT IWVLFEW+N+HFL+L+C+AL+LGM+AQF+W++
Sbjct: 77  VLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWINFHFLSLVCYALLLGMIAQFVWSN 136

Query: 165 ASGYMSRSSSSSKVPRIVLPDELFVNIAVSFGAEVNRALGVLQDIACEGNFKHLLVAVVS 224
           ASG+++RS   S+VPR+VLP + F  + V+ G EVNR L  LQD+AC+GN K  L+AV+ 
Sbjct: 137 ASGFLNRSQ--SRVPRLVLPKDFFAEVGVAVGKEVNRGLLFLQDLACKGNLKQFLMAVIG 196

Query: 225 LWAGAVISSWCNFITVLYIGFVAAHTLPILYEKYEDEVDTFAYKVIDQLRGQYQKLDSSV 284
           LW  A++ S CNF+TVLYIGFV AHT+P+LYE+YEDEVD F   +I +    Y+KLD+  
Sbjct: 197 LWVAAMVGSCCNFLTVLYIGFVGAHTMPVLYERYEDEVDGFMDSMIMKFHSHYKKLDTGF 256

Query: 285 LSKIPKGSFKGKKYE 300
           LS+IP G F  KK E
Sbjct: 257 LSRIPSGKFGLKKRE 267

[Close]

BLAST of CmaCh04G006220 vs. TAIR10
Match: AT2G46170.1 (AT2G46170.1 Reticulon family protein)

HSP 1 Score: 204.9 bits (520), Expect = 6.9e-53
Identity = 107/243 (44.03%), Postives = 158/243 (65.02%), Query Frame = 1


Query: 54  TAEEILSNISEVLAEHGQKAKSVSFFGEDSKSSSVTGQIKRIFGRQKPVYHILGGGKSAD 113
           T E ++  ISE +  H   + S S + +    S+V  +I R+FGR+KPV+ +LGGGK AD
Sbjct: 11  TEESLMEKISEKIHHHDSSSSSESEYEKPDSPSAVKAKIYRMFGREKPVHKVLGGGKPAD 70

Query: 114 VLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLLCFALVLGMLAQFIWTSASGYMSRSS 173
           V LWR+KK+S +VL  AT IWVLFE + YH L+LLC   +L +   F+W++A   +++  
Sbjct: 71  VFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFLWSNAHTLINK-- 130

Query: 174 SSSKVPRIVLPDELFVNIAVSFGAEVNRALGVLQDIACEGNFKHLLVAVVSLWAGAVISS 233
           +S ++P I +P+E F+ +A S   E+N+A  +L+ IA   + K  L+ VV LW  +V+ +
Sbjct: 131 TSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVVGLWIISVVGN 190

Query: 234 WCNFITVLYIGFVAAHTLPILYEKYEDEVDTFAYKVIDQLRGQYQKLDSSVLSKIPKGSF 293
           W NF+T++YI FV  HT+P+LYEK+ED+VD  A K + +L+ QY   D  VLSKIP  S 
Sbjct: 191 WFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVVFDEKVLSKIPIASL 250

Query: 294 KGK 297
           K K
Sbjct: 251 KAK 251

[Close]

BLAST of CmaCh04G006220 vs. TAIR10
Match: AT4G23630.1 (AT4G23630.1 VIRB2-interacting protein 1)

HSP 1 Score: 190.3 bits (482), Expect = 1.7e-48
Identity = 99/258 (38.37%), Postives = 155/258 (60.08%), Query Frame = 1


Query: 51  ERITAEEILSNISEVLAEHGQKAKSVSFFGED-----------SKSSSVTGQIKRIFGRQ 110
           E +  E ++  ISE +  HG  + S S   +D           S SSS+  ++ R+FGR+
Sbjct: 19  EVVERESLMDKISEKI-HHGGDSSSSSSSSDDEDEKKKTKKPSSPSSSMKSKVYRLFGRE 78

Query: 111 KPVYHILGGGKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLLCFALVLGMLAQ 170
           +PV+ +LGGGK AD+ +W+NKK+S  VL GAT  WV+FE + YH LTLLC  +++ +   
Sbjct: 79  QPVHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMIVVLAVL 138

Query: 171 FIWTSASGYMSRSSSSSKVPRIVLPDELFVNIAVSFGAEVNRALGVLQDIACEGNFKHLL 230
           F+W++A+ ++++  S  K+P + +P+E  + +A     E+NR    L++IA   + K  L
Sbjct: 139 FLWSNATMFINK--SPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLKKFL 198

Query: 231 VAVVSLWAGAVISSWCNFITVLYIGFVAAHTLPILYEKYEDEVDTFAYKVIDQLRGQYQK 290
           +A+  LW  +++    NF+T+ YI  V   T+P+ Y+KYED+VD    K + +L+ QY  
Sbjct: 199 IAIAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKKQYAV 258

Query: 291 LDSSVLSKIPKGSFKGKK 298
           LD  VLSKIP G  K KK
Sbjct: 259 LDEKVLSKIPLGPLKNKK 273

[Close]

BLAST of CmaCh04G006220 vs. TAIR10
Match: AT4G11220.1 (AT4G11220.1 VIRB2-interacting protein 2)

HSP 1 Score: 190.3 bits (482), Expect = 1.7e-48
Identity = 93/253 (36.76%), Postives = 155/253 (61.26%), Query Frame = 1


Query: 51  ERITAEEILSNISEVLAEHGQKAKSVSFFGEDSKSSS------VTGQIKRIFGRQKPVYH 110
           E +  E ++  +SE +   G  + S S   E+ K SS      +  ++ R+FGR++PV+ 
Sbjct: 19  EVVERESLMEKLSEKIHHKGDSSSSSSSDDENEKKSSSSSPKSLKSKVYRLFGRERPVHK 78

Query: 111 ILGGGKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLLCFALVLGMLAQFIWTS 170
           +LGGGK AD+ +W++KK+S  V  GAT+ WVLFE + YH LTLLC  +++ +   F+W++
Sbjct: 79  VLGGGKPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMIVALAVLFLWSN 138

Query: 171 ASGYMSRSSSSSKVPRIVLPDELFVNIAVSFGAEVNRALGVLQDIACEGNFKHLLVAVVS 230
           A+ ++ +S    K+P + +P+E  + +A     E+NR +  L++IA   + K  L A+  
Sbjct: 139 ATMFIHKSPP--KIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDIKKFLSAIAG 198

Query: 231 LWAGAVISSWCNFITVLYIGFVAAHTLPILYEKYEDEVDTFAYKVIDQLRGQYQKLDSSV 290
           LW  +++    +F+T+ YI  V   T+P+ Y+KYED+VD++  K + +L+ QY  LD+ V
Sbjct: 199 LWVLSILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEKAMAELKKQYAVLDAKV 258

Query: 291 LSKIPKGSFKGKK 298
            SKIP+G  K KK
Sbjct: 259 FSKIPRGPLKDKK 269

[Close]

BLAST of CmaCh04G006220 vs. TAIR10
Match: AT1G64090.2 (AT1G64090.2 Reticulan like protein B3)

HSP 1 Score: 183.7 bits (465), Expect = 1.6e-46
Identity = 98/258 (37.98%), Postives = 152/258 (58.91%), Query Frame = 1


Query: 56  EEILSNISEVLAEHGQKAKSVSFFGEDSKSSSVTGQIKRIFGRQKPVYHILGGGK----- 115
           E I+  ISE +  H   + S S   +D  S+S+  +I R+FGR++P++ + GGGK     
Sbjct: 9   ESIMEKISEKIHGHDDSSSSSSDSDDDKNSASLKTKIYRLFGREQPLHKLFGGGKHSENQ 68

Query: 116 -----------SADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLLCFALVLGMLAQ 175
                      +AD+ LWRNKK+S  VL  AT+ W+LFE L Y+ LTL     +L +   
Sbjct: 69  DINERFGLVFAAADIFLWRNKKVSGGVLGAATVSWILFELLEYNLLTLFGHISILALAVL 128

Query: 176 FIWTSASGYMSRSSSSSKVPRIVLPDELFVNIAVSFGAEVNRALGVLQDIACEGNFKHLL 235
           F+W+SAS ++ +  S   +P + +P+++ + +A     E+NR   VL+DIA   + K  L
Sbjct: 129 FLWSSASTFIHK--SPLHIPEVHIPEDVVLQLASGLRIEINRGFTVLRDIASGRDLKKFL 188

Query: 236 VAVVSLWAGAVISSWCNFITVLYIGFVAAHTLPILYEKYEDEVDTFAYKVIDQLRGQYQK 294
           + +  LW  + + S CNF+T++YI  V   T+P+LYEKYED+VD F  K + +++ QY +
Sbjct: 189 LVIAGLWVLSKVGSSCNFLTLIYIATVLLFTIPVLYEKYEDKVDDFGEKAMREIKKQYVE 248

[Close]

BLAST of CmaCh04G006220 vs. NCBI nr
Match: gi|659101885|ref|XP_008451843.1| (PREDICTED: reticulon-like protein B8 isoform X2 [Cucumis melo])

HSP 1 Score: 428.7 bits (1101), Expect = 8.3e-117
Identity = 215/253 (84.98%), Postives = 236/253 (93.28%), Query Frame = 1


Query: 47  RTMSERITAEEILSNISEVLAEHGQKAKSVSFFGEDSKSSSVTGQIKRIFGRQKPVYHIL 106
           RTMSE++ AE++ +NISEVLAEHGQK KSVSFFGED+K+SSV GQI RIFGRQKPVY++L
Sbjct: 2   RTMSEKMIAEDLFNNISEVLAEHGQKGKSVSFFGEDNKASSVAGQINRIFGRQKPVYNLL 61

Query: 107 GGGKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLLCFALVLGMLAQFIWTSAS 166
           GGGKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTL+CFALVLGMLAQFIWT+AS
Sbjct: 62  GGGKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQFIWTNAS 121

Query: 167 GYMSRSSSSSKVPRIVLPDELFVNIAVSFGAEVNRALGVLQDIACEGNFKHLLVAVVSLW 226
           G+++RSSS+  VPR+VLP ELFVNIAV+FGAEVNRAL  LQDIACEGN KH LVAV+SLW
Sbjct: 122 GFLNRSSSN--VPRLVLPKELFVNIAVTFGAEVNRALCYLQDIACEGNLKHFLVAVLSLW 181

Query: 227 AGAVISSWCNFITVLYIGFVAAHTLPILYEKYEDEVDTFAYKVIDQLRGQYQKLDSSVLS 286
            GAVISSWCNFITVLY+GFVAAHTLPILYEKYEDEVDTFAYKV DQL G Y+K DSSVLS
Sbjct: 182 VGAVISSWCNFITVLYVGFVAAHTLPILYEKYEDEVDTFAYKVFDQLCGHYRKFDSSVLS 241

Query: 287 KIPKGSFKGKKYE 300
           KIPKG+FKGKKYE
Sbjct: 242 KIPKGAFKGKKYE 252

[Close]

BLAST of CmaCh04G006220 vs. NCBI nr
Match: gi|778691333|ref|XP_011653261.1| (PREDICTED: reticulon-like protein B8 [Cucumis sativus])

HSP 1 Score: 428.3 bits (1100), Expect = 1.1e-116
Identity = 215/251 (85.66%), Postives = 234/251 (93.23%), Query Frame = 1


Query: 49  MSERITAEEILSNISEVLAEHGQKAKSVSFFGEDSKSSSVTGQIKRIFGRQKPVYHILGG 108
           MSE++TAE+ ++NISEVL EHGQK KSVSFFGEDSKSSSV GQI RIFGRQKPVY++LGG
Sbjct: 1   MSEKMTAEDFINNISEVLTEHGQKGKSVSFFGEDSKSSSVAGQINRIFGRQKPVYNLLGG 60

Query: 109 GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLLCFALVLGMLAQFIWTSASGY 168
           GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTL+CFALVLGMLAQF+WT+ASG+
Sbjct: 61  GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQFMWTNASGF 120

Query: 169 MSRSSSSSKVPRIVLPDELFVNIAVSFGAEVNRALGVLQDIACEGNFKHLLVAVVSLWAG 228
           ++RSSS+  VPR+VLP ELFVNIAV+FGAEVNRAL  LQDIACEGN KH LVAVVSLW G
Sbjct: 121 LNRSSSN--VPRLVLPKELFVNIAVTFGAEVNRALCYLQDIACEGNLKHFLVAVVSLWVG 180

Query: 229 AVISSWCNFITVLYIGFVAAHTLPILYEKYEDEVDTFAYKVIDQLRGQYQKLDSSVLSKI 288
           AVISSWCNF+TVLYIGFVAAHTLPILYEKYEDEVDTFAYKV DQL G YQK DSSVLSKI
Sbjct: 181 AVISSWCNFVTVLYIGFVAAHTLPILYEKYEDEVDTFAYKVFDQLCGHYQKFDSSVLSKI 240

Query: 289 PKGSFKGKKYE 300
           P+G+FKGKKYE
Sbjct: 241 PRGAFKGKKYE 249

[Close]

BLAST of CmaCh04G006220 vs. NCBI nr
Match: gi|659101883|ref|XP_008451841.1| (PREDICTED: reticulon-like protein B8 isoform X1 [Cucumis melo])

HSP 1 Score: 391.0 bits (1003), Expect = 1.9e-105
Identity = 196/226 (86.73%), Postives = 212/226 (93.81%), Query Frame = 1


Query: 74  KSVSFFGEDSKSSSVTGQIKRIFGRQKPVYHILGGGKSADVLLWRNKKISASVLTGATII 133
           KSVSFFGED+K+SSV GQI RIFGRQKPVY++LGGGKSADVLLWRNKKISASVLTGATII
Sbjct: 44  KSVSFFGEDNKASSVAGQINRIFGRQKPVYNLLGGGKSADVLLWRNKKISASVLTGATII 103

Query: 134 WVLFEWLNYHFLTLLCFALVLGMLAQFIWTSASGYMSRSSSSSKVPRIVLPDELFVNIAV 193
           WVLFEWLNYHFLTL+CFALVLGMLAQFIWT+ASG+++RSSS+  VPR+VLP ELFVNIAV
Sbjct: 104 WVLFEWLNYHFLTLVCFALVLGMLAQFIWTNASGFLNRSSSN--VPRLVLPKELFVNIAV 163

Query: 194 SFGAEVNRALGVLQDIACEGNFKHLLVAVVSLWAGAVISSWCNFITVLYIGFVAAHTLPI 253
           +FGAEVNRAL  LQDIACEGN KH LVAV+SLW GAVISSWCNFITVLY+GFVAAHTLPI
Sbjct: 164 TFGAEVNRALCYLQDIACEGNLKHFLVAVLSLWVGAVISSWCNFITVLYVGFVAAHTLPI 223

Query: 254 LYEKYEDEVDTFAYKVIDQLRGQYQKLDSSVLSKIPKGSFKGKKYE 300
           LYEKYEDEVDTFAYKV DQL G Y+K DSSVLSKIPKG+FKGKKYE
Sbjct: 224 LYEKYEDEVDTFAYKVFDQLCGHYRKFDSSVLSKIPKGAFKGKKYE 267

[Close]

BLAST of CmaCh04G006220 vs. NCBI nr
Match: gi|225446769|ref|XP_002283026.1| (PREDICTED: reticulon-like protein B8 [Vitis vinifera])

HSP 1 Score: 359.8 bits (922), Expect = 4.7e-96
Identity = 175/251 (69.72%), Postives = 215/251 (85.66%), Query Frame = 1


Query: 49  MSERITAEEILSNISEVLAEHGQKAKSVSFFGEDSKSSSVTGQIKRIFGRQKPVYHILGG 108
           M E ITAE++L+NI E ++++ QK KSVSFF E+ KS+SVT Q KR+FGR+KPVY++LG 
Sbjct: 1   MPEGITAEKLLNNIMETISDNAQKKKSVSFF-EEEKSNSVTSQFKRLFGREKPVYNLLGA 60

Query: 109 GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLLCFALVLGMLAQFIWTSASGY 168
           GKSAD++LWRNKKISAS +TGAT+IWVLFEWLNYHFLTLLCFA+VLGM+AQF+W++ASG 
Sbjct: 61  GKSADLMLWRNKKISASFITGATLIWVLFEWLNYHFLTLLCFAVVLGMIAQFVWSNASGV 120

Query: 169 MSRSSSSSKVPRIVLPDELFVNIAVSFGAEVNRALGVLQDIACEGNFKHLLVAVVSLWAG 228
            SRSS  S+VPRIVLPDELF NI V+ G ++N+ALG LQD+AC GN K  L+ VVSLWA 
Sbjct: 121 FSRSS--SEVPRIVLPDELFQNIGVAVGVQINQALGFLQDVACGGNLKQFLLVVVSLWAA 180

Query: 229 AVISSWCNFITVLYIGFVAAHTLPILYEKYEDEVDTFAYKVIDQLRGQYQKLDSSVLSKI 288
           AVI SWCNF+TVLY+GF+AAHTLP+LYE+YED+VD F Y+V+ QL+  Y+KLDS  LSKI
Sbjct: 181 AVIGSWCNFLTVLYVGFIAAHTLPVLYERYEDQVDGFVYQVLGQLQHNYRKLDSGFLSKI 240

Query: 289 PKGSFKGKKYE 300
           PKGS KGKK+E
Sbjct: 241 PKGSLKGKKHE 248

[Close]

BLAST of CmaCh04G006220 vs. NCBI nr
Match: gi|1009127311|ref|XP_015880630.1| (PREDICTED: reticulon-like protein B8 [Ziziphus jujuba])

HSP 1 Score: 358.6 bits (919), Expect = 1.1e-95
Identity = 183/251 (72.91%), Postives = 211/251 (84.06%), Query Frame = 1


Query: 49  MSERITAEEILSNISEVLAEHGQKAKSVSFFGEDSKSSSVTGQIKRIFGRQKPVYHILGG 108
           M+E+ TA  IL+N+ E LAE   K KSVSFF E++KS SVT QI R+FGRQKPV+ ILGG
Sbjct: 1   MTEKTTAANILNNLVETLAESSGKQKSVSFF-EENKSDSVTSQINRLFGRQKPVHRILGG 60

Query: 109 GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLLCFALVLGMLAQFIWTSASGY 168
           GKSADVLLWRNKKISASVLTGAT +WVLFEWLNYH LTL+ FALVLGMLAQF+ T+ASG 
Sbjct: 61  GKSADVLLWRNKKISASVLTGATAVWVLFEWLNYHLLTLISFALVLGMLAQFVLTNASGL 120

Query: 169 MSRSSSSSKVPRIVLPDELFVNIAVSFGAEVNRALGVLQDIACEGNFKHLLVAVVSLWAG 228
           ++RS S+  VPR+VLPD+LFVNIAVS G E+NRALG LQD+AC GN K LLV + SLWA 
Sbjct: 121 LNRSPST--VPRLVLPDDLFVNIAVSVGYELNRALGFLQDVACGGNLKQLLVVIASLWAA 180

Query: 229 AVISSWCNFITVLYIGFVAAHTLPILYEKYEDEVDTFAYKVIDQLRGQYQKLDSSVLSKI 288
           AVI  WCNF+TVLYIGFVAAHTLP+LYEKYEDEVD+F YKV +QL+  Y+KLD+ VLS+I
Sbjct: 181 AVIGGWCNFLTVLYIGFVAAHTLPVLYEKYEDEVDSFVYKVFEQLQHNYKKLDAGVLSRI 240

Query: 289 PKGSFKGKKYE 300
           PKG FKGKK E
Sbjct: 241 PKGKFKGKKAE 248

The following BLAST results are available for this feature:

BLAST of CmaCh04G006220 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RTNLH_ARATH	1.6e-75	55.38	Reticulon-like protein B8 OS=Arabidopsis thaliana GN=RTNLB8 PE=2 SV=1	[more]
RTNLE_ARATH	1.2e-51	44.03	Reticulon-like protein B5 OS=Arabidopsis thaliana GN=RTNLB5 PE=1 SV=1	[more]
RTNLF_ARATH	2.2e-48	41.49	Reticulon-like protein B6 OS=Arabidopsis thaliana GN=RTNLB6 PE=1 SV=1	[more]
RTNLC_ARATH	3.7e-48	40.50	Reticulon-like protein B3 OS=Arabidopsis thaliana GN=RTNLB3 PE=2 SV=1	[more]
RTNLA_ARATH	3.1e-47	38.37	Reticulon-like protein B1 OS=Arabidopsis thaliana GN=RTNLB1 PE=1 SV=1	[more]

BLAST of CmaCh04G006220 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXG6_CUCSA	7.5e-117	85.66	Reticulon-like protein OS=Cucumis sativus GN=Csa_4G063430 PE=4 SV=1	[more]
E0CU01_VITVI	3.3e-96	69.72	Reticulon-like protein OS=Vitis vinifera GN=VIT_12s0028g01090 PE=4 SV=1	[more]
B9S6H1_RICCO	2.0e-93	69.32	Reticulon-like protein OS=Ricinus communis GN=RCOM_0536570 PE=4 SV=1	[more]
A0A0L9UV16_PHAAN	9.9e-93	70.52	Reticulon-like protein OS=Phaseolus angularis GN=LR48_Vigan07g029700 PE=4 SV=1	[more]
A0A0S3RJR0_PHAAN	9.9e-93	70.52	Reticulon-like protein OS=Vigna angularis var. angularis GN=Vigan.03G042600 PE=4...	[more]

BLAST of CmaCh04G006220 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G10260.3	4.7e-78	55.29	Reticulon family protein	[more]
AT2G46170.1	6.9e-53	44.03	Reticulon family protein	[more]
AT4G23630.1	1.7e-48	38.37	VIRB2-interacting protein 1	[more]
AT4G11220.1	1.7e-48	36.76	VIRB2-interacting protein 2	[more]
AT1G64090.2	1.6e-46	37.98	Reticulan like protein B3	[more]

BLAST of CmaCh04G006220 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659101885\|ref\|XP_008451843.1\|	8.3e-117	84.98	PREDICTED: reticulon-like protein B8 isoform X2 [Cucumis melo]	[more]
gi\|778691333\|ref\|XP_011653261.1\|	1.1e-116	85.66	PREDICTED: reticulon-like protein B8 [Cucumis sativus]	[more]
gi\|659101883\|ref\|XP_008451841.1\|	1.9e-105	86.73	PREDICTED: reticulon-like protein B8 isoform X1 [Cucumis melo]	[more]
gi\|225446769\|ref\|XP_002283026.1\|	4.7e-96	69.72	PREDICTED: reticulon-like protein B8 [Vitis vinifera]	[more]
gi\|1009127311\|ref\|XP_015880630.1\|	1.1e-95	72.91	PREDICTED: reticulon-like protein B8 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003388	Reticulon

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009963	positive regulation of flavonoid biosynthetic process
biological_process	GO:0006612	protein targeting to membrane
biological_process	GO:0010363	regulation of plant-type hypersensitive response
biological_process	GO:0050789	regulation of biological process
biological_process	GO:0044763	single-organism cellular process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G006220.1	CmaCh04G006220.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003388	Reticulon	PFAM	PF02453	Reticulon	coord: 112..268 score: 1.6
IPR003388	Reticulon	PROFILE	PS50845	RETICULON	coord: 111..299 score: 42
None	No IPR available	PANTHER	PTHR10994	RETICULON	coord: 51..299 score: 1.1E
None	No IPR available	PANTHER	PTHR10994:SF62	RETICULON-LIKE PROTEIN B8	coord: 51..299 score: 1.1E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh04G006220	Cucsa.179920	Cucumber (Gy14) v1	cgycmaB0512
CmaCh04G006220	Cla005430	Watermelon (97103) v1	cmawmB692
CmaCh04G006220	Csa4G063430	Cucumber (Chinese Long) v2	cmacuB708
CmaCh04G006220	MELO3C016191	Melon (DHL92) v3.5.1	cmameB701
CmaCh04G006220	ClCG07G010810	Watermelon (Charleston Gray)	cmawcgB675
CmaCh04G006220	CSPI04G07270	Wild cucumber (PI 183967)	cmacpiB714
CmaCh04G006220	CmoCh04G006690	Cucurbita moschata (Rifu)	cmacmoB728
CmaCh04G006220	CmoCh16G005170	Cucurbita moschata (Rifu)	cmacmoB703
CmaCh04G006220	Lsi07G008100	Bottle gourd (USVL1VR-Ls)	cmalsiB695
CmaCh04G006220	Cp4.1LG14g03170	Cucurbita pepo (Zucchini)	cmacpeB717
CmaCh04G006220	Cp4.1LG01g01010	Cucurbita pepo (Zucchini)	cmacpeB720
CmaCh04G006220	MELO3C016191.2	Melon (DHL92) v3.6.1	cmamedB790
CmaCh04G006220	CsaV3_4G007510	Cucumber (Chinese Long) v3	cmacucB0841
CmaCh04G006220	Cla97C07G137550	Watermelon (97103) v2	cmawmbB782
CmaCh04G006220	Bhi01G002394	Wax gourd	cmawgoB0847
CmaCh04G006220	CsGy4G007160	Cucumber (Gy14) v2	cgybcmaB541
CmaCh04G006220	Carg11401	Silver-seed gourd	carcmaB0927
CmaCh04G006220	Carg13123	Silver-seed gourd	carcmaB0055

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh04G006220	CmaCh16G004780	Cucurbita maxima (Rimu)	cmacmaB353

The following block(s) are covering this gene:

None