Carg11401 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg11401
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Reticulon-like protein
Location	Cucurbita_argyrosperma_scaffold_025 : 767090 .. 771882 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAATCCGGTACTTTTTTACTCTCTCATCGTCTACTGTTTTTATCACTCGTTTTTGTGTAGTGCTTAACGGAGTTTTTTCAGAACCCACTTTCATCTATCTGTTCTTCAGTTTCTTCCTTGAAGACCCATTAATTTCCTGCTCTTGGTTTGTGTTCTTGAGTTCCATTTTAGATTTTGATGAATTTTTGCTTGTTTTGCTTCTTTTTCAGGATGATTCCATCTTTTAATTTGTTTGTTTGATGCTTAAATGGGGTTAAATGCCGCTAGCTCTGTTTTACTTCATAGTTGTTGTAGATTTGATCTTTCTCTTTTTGTTTACTTCTGCTGTAATCTTGGTAGCATCCTGTTAATCTCTTACATATTGTCTCATCCTCCTCTGTCTCTTGAAGGTTCTATTTCGTTTTATCTTGCATTACCACGCTGAATATTTGGATGAATCTGAAGATTTTGATGCTTGAATGAGATTTGGATTGCTTTTGATCTTGACTTGGTATCCTCCTCCTGGGTGGATTAGAATGTTGGATGCTCTGGGCTAGCCGATATTGTCCTCCTCATTAGGCTTTCCCTTGTTTACTTTTCCTAACGGTTTTTAAAACGTGTATGCTAGGGAGAGATTTCCATACCCTTATGAAGAATGTTTCGTTCTCCTCCCCAACCAATGTGGGATCTTACAATCCATCCCCTTCGGGACCCAACGTCCTCACTAACACTCATTTCTTTCTCCAATCGATGTGGAACCCCTCAATCCATCCCTCTTCAGAGTCCAGCGTTCTTGTCAGCATACTGCCTTGTGTCCACCCCTTCTTTGCTGGCACCTTGCCCAGTGTCTAGCTCTGATCCCATTTGATAATAATTCAAGCCCATCGCTAGCAGATATGGCTGTTATAGATCGACTTATGCTTTTCTTTGAGTGGAAAGTTTTGACAAGGAGCTTGGACCTTGATTTGCTCCTTTACTCATATGATTAATCTCATGCATCCTATTGACTATTATTGTTCTTATTTTGTGCTTGTTTATATTTTTATCAATCTGCCTTAACTTTGGCTTCTTTTGCTTGTTATTTCTTCTTTGAAGCACAAGAACGATGTCTGAGAATGTACCTGCTAAGGATCTTCCTCAGAATTTTTCTGAAGCTCCTGCTGAACGTGGTCATAAGGCAGAATCAGTATCGTCACCGTGTTCAGTGGCTGGTCGGAAGAAGCGGATATTTGGACGAAAAAAGTCCGTTCACCATCTTCTCGGGGGCGGAATATGTATATCCTTATTTATACGTTCTTAGTTTTTCTTCATCTTCTATAATCTTTTTCATGTCTTGAATCATATTACTTCATTTTGATTTCTCTGCTGATCAAATATTTGTAGCTGCTGATGTGCTGCTATGGAAGAACAAGAAAATCTCAGCTAGTGTTTTGACTGGTGCAACTATTATTTGGATACTGTTTGAATGGCTTAGTTACCACTTCTTGACTATTGTTTGCTTTGCTCTGGTTCTTGGTATGTTGTTTCAGTTTATATGGACAAATGCCTCGGGATTTCTGGACAGGTGATTGGAAAATAGACGTTTATGCCATTGTTTCCCATTGACTTCAATGCATTTTCTGGTTTAACAAATGCTGATGCATTCTGTAACATGTTTCGTGCACTGCAGAACATCGTCTAATGTTCCTCACTTCGATCTTCCTGAGGAACTATTTGTCGAAATTGCTGTCTCATTTGGTGCCGAGGTTAACCGAGCTCTTCATTTTCTCCAAGATATTGCTTGTAATGGAGATTTGAAACAATTCCTTGGGGTATGCTATCATATTTTATGTACTACTTTTGCAATTCTGTGCATTTCTAAAGATCATTAGTTGTAACAGCCCAAGCTCACCGCTAACAGATATTGTTCTCTTTGAGCTTTTCCTTCCGGGCTTTCCTTCAAGGTTTTAAAACGCATCTGCTAGGGAGAGGTTTCCAGACCCTTGTAAAGAATGTTCTGTTCCCCTTTCCAACCGATGTGGGATCTCACAATCCACCCCCCTTCGAGGCCTAGCGTACTCGCTGGCACTCGTTCTCCTCTCCAATCGACGTGGGATCTCACAATACACCTCCCTTCAGGGCCCAACATCCTCGCTGGAACACCGCTGGGTGTCCACCTCCCCTTCGGGGCTCAGTCTCCTTGTTGGCACCCCTCCCCGTGTCTAGCTCTGATACCATTTGTAACTGTCCAAGCTCACCACTAGCAAATATTGTCCTCTTTGAGTTTTTCCTTCCGAGCTTCTCCTCAAGATTTTAAGACTCGCTTGTTAGAGATAGGTTTTCACGCCCTTATAAAGAATGCTTTGTTCCCCTCTCCAACCGACGTGGGATCTCGCATTAGTATTCACTGGACATTCATATATGAGTATTTCAGTTCAAGACCTTGAAATTGAATAAATACGAGCATCAACTTTCTGTTATTGATCTTAAACTCATAGCTCCCCTCACCTCTCACCTTAGGTGCATGCCTGAGGTTGCCTTGGAAACACTGATGGTAGCATTCTGAAGGGGATCAGCTTAAAACCATGAACTATCTGTATCAATGAATGCCCTTACTCAACAATAGACATGAGTGGTAAAAGAAAAGAAGACAGGCACCCACCGCTAGCAGAAATTGTCCACTTTAGTCCGTTATGTATCGCTGTCAGTCTCACGATTTTAAAACGCGTCTATTAGGGAGATGTTTCCATACCCTTATAAAGAATGCTTCGTTCCACTCTCCAACCAATGTGGGGATCTCACAATCCCTCCTTTTGGGGTCCAGCGTCCTCGCTAGCACATCGCTCGATGTCTAGCTCTAATACCATTTTGTAACAGCCCAAGCCCACCGCTAATAGATATTTTCCGCTTTAGCCCGTTACGTATCACCGTCAGCCTCATGATTTTAAAACGCATCTACTAAGGAGAGGTTTCCACACTCTTATAAGAAATGATTCGTTCCCCTCTCCAACCGATGTGGAATCTCACTCGACATTTGAAAAAGCCTCTCCATCTTTCCTGAACTTGCTGCTGATTCAGGAAGTGATATATGCAACTAATATGTTAGTTGAAAATATGAACACCAAACACATTGGACATACAAGTATGGTGGCTTAGTTTTGCAAGAATCTGCTATAATTGGATGGAGTTTCTTTGATTATAACTCTCTAGGAACTTGCTGTTTTGATCTTCTTGTAGATGCTTCTTTAATGTGAATATGTTTTCAGGCTGTAGTAAGCTTGTGGGCTGGTGCTGTGATTAGTAGCTGGTCCAATTTCATTACTGTCTTGTATGTTGGTAAGTGGCTTCAGATTCAGCATCTCAAAACATTTACATCTTTGATCATATTATTTACTTACAACCAGTAGGATTCATTCTGGGTTGTCAAAATATTAATCTACGGTCCTGGAAGGGATGATCTTATTCACTTACCGAATGTTGTAGGATTATATGGTCGTGTGAAACTAGTTGAGATGAGTGTAACCTGACCCAGACTGTAACGGCCCAAGCCCACCGTTAGTAGATATTGTATTCTTTAGAGTTTTCTTTTGGGGCTTCCCCTCAAGTTTTTTTAAACCGTGTCTGCTAGAGAGAAGTTTCCACACCCTTATAAAGAATGTTTTGTTTTTCTCCCCAACCAATGTGGGATCTCACAATCCACCCCTCTTCAGGGCCTAGTATCCTTGCTAGCACTCGTTCCCTTCTCCAATCAATGTGGGACCCCCCATCCATCCCCCTTTAGGGCCTAGCATTCTTGTTGGCACACCGCCTTGTGTCCACCCCCCTTGGGGCTCAGCTTCCTTGCTGGCACATCGCCCGATATGTAGCTCTGATACCATTTGTAACAGCCCAAGCCCACCGCTAGTAACTATTGTCTTCTTTGGGCTTTCCTTTTCAGGCTTCCCCTCAAGGTTTTTAAAACGCGTCTTCTAGAGAGAGGTTTCCACACGCTTATAAAGAACGTTTCGTTCTCCTCCCAAACCGATGTGAGATCTCACACATACACTTAAGTTATTTCATTTCGTCAGATAAAATATAGGATAGCTACATCGTACATCCCATGGAAAGTCGGATATTCCTTATGCCTAATTGTTTTCAAACACAAAATGTTGTAGGTCGAGACGATCGTCCTATCCTATGAAACCACCAATCTTCACAACTACTAACACATTTCAAATACATCCAGGTTTCGTTGCAGCCCATACGCTTCCAATTCTGTACGAGAAATACGAAGATGAAGTCGACACCTTCGCATTCAACGTCTTTGACCAGCTTTGTGGTCACTTCCAGAAGTTGGATTCCAGTGTCCTTAGCAAGATCCCCAGAGGAGGACCATTACCGGAAAAGAAGCATGAATAGATCATTTTCAACTCAGTAATGCCTAATCCATCTCTAGTTTTTGCAAGTATTTGGCTGTGTATGATAGAAACGAACCTTTTAAGTTTATGTTTGCCTGTCTGCTGCTGAACTAGGAACCATCTTTGACTGATCTTTGCAGCCATTGGCTTCTTTATTACAAGTGCTTGACTCAAGCATATGGACTGTTTTTTTAATAAAGCCTTGGCCCAAGTAATCGTGTTTATCGGCTACTGAATTATTGACCTCTCTCAAACGGTAATTGATACTTTATCCACTAAACTATAGCGGAATGGTTTTCTTCCTATTTTCTTGCCAAACGTACAACCTACAAAAATCTATTTTCTCGTTCATTAGGTTTCTGTTCAAGGGCTTCAACCAACATTTCGCCACATGCATTGTGAATGGGATCAAGACCCCGAGAGATTTTATTGTTTTA

mRNA sequence

GGAATCCGGTACTTTTTTACTCTCTCATCGTCTACTGTTTTTATCACTCGTTTTTGTGTAGTGCTTAACGGAGTTTTTTCAGAACCCACTTTCATCTATCTGTTCTTCAGTTTCTTCCTTGAAGACCCATTAATTTCCTGCTCTTGCACAAGAACGATGTCTGAGAATGTACCTGCTAAGGATCTTCCTCAGAATTTTTCTGAAGCTCCTGCTGAACGTGGTCATAAGGCAGAATCAGTATCGTCACCGTGTTCAGTGGCTGGTCGGAAGAAGCGGATATTTGGACGAAAAAAGTCCGTTCACCATCTTCTCGGGGGCGGAATATCTGCTGATGTGCTGCTATGGAAGAACAAGAAAATCTCAGCTAGTGTTTTGACTGGTGCAACTATTATTTGGATACTGTTTGAATGGCTTAGTTACCACTTCTTGACTATTGTTTGCTTTGCTCTGGTTCTTGGTATGTTGTTTCAGTTTATATGGACAAATGCCTCGGGATTTCTGGACAGAACATCGTCTAATGTTCCTCACTTCGATCTTCCTGAGGAACTATTTGTCGAAATTGCTGTCTCATTTGGTGCCGAGGTTAACCGAGCTCTTCATTTTCTCCAAGATATTGCTTGTAATGGAGATTTGAAACAATTCCTTGGGGCTGTAGTAAGCTTGTGGGCTGGTGCTGTGATTAGTAGCTGGTCCAATTTCATTACTGTCTTGTATGTTGGTTTCGTTGCAGCCCATACGCTTCCAATTCTGTACGAGAAATACGAAGATGAAGTCGACACCTTCGCATTCAACGTCTTTGACCAGCTTTGTGGTCACTTCCAGAAGTTGGATTCCAGTGTCCTTAGCAAGATCCCCAGAGGAGGACCATTACCGGAAAAGAAGCATGAATAGATCATTTTCAACTCAGTAATGCCTAATCCATCTCTAGTTTTTGCAAGTATTTGGCTGTGTATGATAGAAACGAACCTTTTAAGTTTATGTTTGCCTGTCTGCTGCTGAACTAGGAACCATCTTTGACTGATCTTTGCAGCCATTGGCTTCTTTATTACAAGTGCTTGACTCAAGCATATGGACTGTTTTTTTAATAAAGCCTTGGCCCAAGTAATCGTGTTTATCGGCTACTGAATTATTGACCTCTCTCAAACGGTAATTGATACTTTATCCACTAAACTATAGCGGAATGGTTTTCTTCCTATTTTCTTGCCAAACGTACAACCTACAAAAATCTATTTTCTCGTTCATTAGGTTTCTGTTCAAGGGCTTCAACCAACATTTCGCCACATGCATTGTGAATGGGATCAAGACCCCGAGAGATTTTATTGTTTTA

Coding sequence (CDS)

ATGTCTGAGAATGTACCTGCTAAGGATCTTCCTCAGAATTTTTCTGAAGCTCCTGCTGAACGTGGTCATAAGGCAGAATCAGTATCGTCACCGTGTTCAGTGGCTGGTCGGAAGAAGCGGATATTTGGACGAAAAAAGTCCGTTCACCATCTTCTCGGGGGCGGAATATCTGCTGATGTGCTGCTATGGAAGAACAAGAAAATCTCAGCTAGTGTTTTGACTGGTGCAACTATTATTTGGATACTGTTTGAATGGCTTAGTTACCACTTCTTGACTATTGTTTGCTTTGCTCTGGTTCTTGGTATGTTGTTTCAGTTTATATGGACAAATGCCTCGGGATTTCTGGACAGAACATCGTCTAATGTTCCTCACTTCGATCTTCCTGAGGAACTATTTGTCGAAATTGCTGTCTCATTTGGTGCCGAGGTTAACCGAGCTCTTCATTTTCTCCAAGATATTGCTTGTAATGGAGATTTGAAACAATTCCTTGGGGCTGTAGTAAGCTTGTGGGCTGGTGCTGTGATTAGTAGCTGGTCCAATTTCATTACTGTCTTGTATGTTGGTTTCGTTGCAGCCCATACGCTTCCAATTCTGTACGAGAAATACGAAGATGAAGTCGACACCTTCGCATTCAACGTCTTTGACCAGCTTTGTGGTCACTTCCAGAAGTTGGATTCCAGTGTCCTTAGCAAGATCCCCAGAGGAGGACCATTACCGGAAAAGAAGCATGAATAG

Protein sequence

MSENVPAKDLPQNFSEAPAERGHKAESVSSPCSVAGRKKRIFGRKKSVHHLLGGGISADVLLWKNKKISASVLTGATIIWILFEWLSYHFLTIVCFALVLGMLFQFIWTNASGFLDRTSSNVPHFDLPEELFVEIAVSFGAEVNRALHFLQDIACNGDLKQFLGAVVSLWAGAVISSWSNFITVLYVGFVAAHTLPILYEKYEDEVDTFAFNVFDQLCGHFQKLDSSVLSKIPRGGPLPEKKHE

Homology

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BLAST of Carg11401 vs. NCBI nr
Match: XP_023521769.1 (reticulon-like protein B8 [Cucurbita pepo subsp. pepo] >XP_023521770.1 reticulon-like protein B8 [Cucurbita pepo subsp. pepo] >XP_023521771.1 reticulon-like protein B8 [Cucurbita pepo subsp. pepo] >XP_023522277.1 reticulon-like protein B8 [Cucurbita pepo subsp. pepo] >XP_023522278.1 reticulon-like protein B8 [Cucurbita pepo subsp. pepo] >XP_023522279.1 reticulon-like protein B8 [Cucurbita pepo subsp. pepo] >XP_023553559.1 reticulon-like protein B8 [Cucurbita pepo subsp. pepo] >XP_023553560.1 reticulon-like protein B8 [Cucurbita pepo subsp. pepo] >XP_023553561.1 reticulon-like protein B8 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 429.1 bits (1102), Expect = 1.0e-116
Identity = 233/244 (95.49%), Postives = 234/244 (95.90%), Query Frame = 0


Query: 1   MSENVPAKDLPQNFSEAPAERGHKAESVSSPCSVAGRKKRIFGRKKSVHHLLGGGISADV 60
           MSENV AKDLPQNFSEAPAERGHKAESVSS  SV GR KRIFGRKKSVHHLLGGG SADV
Sbjct: 1   MSENVTAKDLPQNFSEAPAERGHKAESVSSSSSVPGRDKRIFGRKKSVHHLLGGGKSADV 60

Query: 61  LLWKNKKISASVLTGATIIWILFEWLSYHFLTIVCFALVLGMLFQFIWTNASGFLDRTSS 120
           LLWKNKKISASVLT ATIIWILFEWLSYHFLTIVCFALVLGMLFQFIWTN SGFLDRTSS
Sbjct: 61  LLWKNKKISASVLTSATIIWILFEWLSYHFLTIVCFALVLGMLFQFIWTNTSGFLDRTSS 120

Query: 121 NVPHFDLPEELFVEIAVSFGAEVNRALHFLQDIACNGDLKQFLGAVVSLWXXXXXXXXXX 180
           NVPH DLPEELFVEIAVSFGAE NRALHFLQDIACNGDLKQFLGAVVSLWXXXXXXXXXX
Sbjct: 121 NVPHLDLPEELFVEIAVSFGAEANRALHFLQDIACNGDLKQFLGAVVSLWXXXXXXXXXX 180

Query: 181 XXXXXXXGFVAAHTLPILYEKYEDEVDTFAFNVFDQLCGHFQKLDSSVLSKIPRGGPLPE 240
           XXXXXXXGFVAAHTLPILYEKYEDEVDTFAFNVFDQLCGHFQKLDS+VLSKIPRGGPLPE
Sbjct: 181 XXXXXXXGFVAAHTLPILYEKYEDEVDTFAFNVFDQLCGHFQKLDSNVLSKIPRGGPLPE 240

Query: 241 KKHE 245
           KKHE
Sbjct: 241 KKHE 244

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BLAST of Carg11401 vs. NCBI nr
Match: XP_022931540.1 (reticulon-like protein B8 isoform X2 [Cucurbita moschata] >XP_022931541.1 reticulon-like protein B8 isoform X2 [Cucurbita moschata] >XP_022931542.1 reticulon-like protein B8 isoform X2 [Cucurbita moschata] >XP_022931543.1 reticulon-like protein B8 isoform X2 [Cucurbita moschata])

HSP 1 Score: 424.9 bits (1091), Expect = 1.9e-115
Identity = 230/244 (94.26%), Postives = 232/244 (95.08%), Query Frame = 0


Query: 1   MSENVPAKDLPQNFSEAPAERGHKAESVSSPCSVAGRKKRIFGRKKSVHHLLGGGISADV 60
           MSENVPAKDLPQNFSEAPAERGHKAESVSSPCSVAGRKKRIFGRKKS+HHLLGGG  ADV
Sbjct: 1   MSENVPAKDLPQNFSEAPAERGHKAESVSSPCSVAGRKKRIFGRKKSIHHLLGGGKCADV 60

Query: 61  LLWKNKKISASVLTGATIIWILFEWLSYHFLTIVCFALVLGMLFQFIWTNASGFLDRTSS 120
           LLWKNKKISASVLTGATIIWILFEWLSYHFLTIVCFALVLGMLFQFIWTNASGFLDRTSS
Sbjct: 61  LLWKNKKISASVLTGATIIWILFEWLSYHFLTIVCFALVLGMLFQFIWTNASGFLDRTSS 120

Query: 121 NVPHFDLPEELFVEIAVSFGAEVNRALHFLQDIACNGDLKQFLGAVVSLWXXXXXXXXXX 180
           NVPH DLP ELFVEIAVSF  E NRALHFLQDIACNGDLKQFLGAVVSL XXXXXXXXXX
Sbjct: 121 NVPHLDLPVELFVEIAVSFAVEANRALHFLQDIACNGDLKQFLGAVVSLXXXXXXXXXXX 180

Query: 181 XXXXXXXGFVAAHTLPILYEKYEDEVDTFAFNVFDQLCGHFQKLDSSVLSKIPRGGPLPE 240
           XXXXXXX   AAHT+PILYEKYEDEVDTFAFNVFDQLCGHFQKLDSSV SKIPRGGPLPE
Sbjct: 181 XXXXXXXXXXAAHTVPILYEKYEDEVDTFAFNVFDQLCGHFQKLDSSVFSKIPRGGPLPE 240

Query: 241 KKHE 245
           KKHE
Sbjct: 241 KKHE 244

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BLAST of Carg11401 vs. NCBI nr
Match: XP_022931539.1 (reticulon-like protein B8 isoform X1 [Cucurbita moschata])

HSP 1 Score: 424.9 bits (1091), Expect = 1.9e-115
Identity = 230/244 (94.26%), Postives = 232/244 (95.08%), Query Frame = 0


Query: 1   MSENVPAKDLPQNFSEAPAERGHKAESVSSPCSVAGRKKRIFGRKKSVHHLLGGGISADV 60
           MSENVPAKDLPQNFSEAPAERGHKAESVSSPCSVAGRKKRIFGRKKS+HHLLGGG  ADV
Sbjct: 83  MSENVPAKDLPQNFSEAPAERGHKAESVSSPCSVAGRKKRIFGRKKSIHHLLGGGKCADV 142

Query: 61  LLWKNKKISASVLTGATIIWILFEWLSYHFLTIVCFALVLGMLFQFIWTNASGFLDRTSS 120
           LLWKNKKISASVLTGATIIWILFEWLSYHFLTIVCFALVLGMLFQFIWTNASGFLDRTSS
Sbjct: 143 LLWKNKKISASVLTGATIIWILFEWLSYHFLTIVCFALVLGMLFQFIWTNASGFLDRTSS 202

Query: 121 NVPHFDLPEELFVEIAVSFGAEVNRALHFLQDIACNGDLKQFLGAVVSLWXXXXXXXXXX 180
           NVPH DLP ELFVEIAVSF  E NRALHFLQDIACNGDLKQFLGAVVSL XXXXXXXXXX
Sbjct: 203 NVPHLDLPVELFVEIAVSFAVEANRALHFLQDIACNGDLKQFLGAVVSLXXXXXXXXXXX 262

Query: 181 XXXXXXXGFVAAHTLPILYEKYEDEVDTFAFNVFDQLCGHFQKLDSSVLSKIPRGGPLPE 240
           XXXXXXX   AAHT+PILYEKYEDEVDTFAFNVFDQLCGHFQKLDSSV SKIPRGGPLPE
Sbjct: 263 XXXXXXXXXXAAHTVPILYEKYEDEVDTFAFNVFDQLCGHFQKLDSSVFSKIPRGGPLPE 322

Query: 241 KKHE 245
           KKHE
Sbjct: 323 KKHE 326

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BLAST of Carg11401 vs. NCBI nr
Match: XP_022984169.1 (reticulon-like protein B8 [Cucurbita maxima] >XP_022984170.1 reticulon-like protein B8 [Cucurbita maxima] >XP_022984171.1 reticulon-like protein B8 [Cucurbita maxima] >XP_022984172.1 reticulon-like protein B8 [Cucurbita maxima])

HSP 1 Score: 424.9 bits (1091), Expect = 1.9e-115
Identity = 231/244 (94.67%), Postives = 234/244 (95.90%), Query Frame = 0


Query: 1   MSENVPAKDLPQNFSEAPAERGHKAESVSSPCSVAGRKKRIFGRKKSVHHLLGGGISADV 60
           MSENV AKD+PQNFSEAPAERGHKAESVS   SV G+ KRIFGRKKSVHHLLGGG SADV
Sbjct: 1   MSENVLAKDVPQNFSEAPAERGHKAESVSLLSSVTGQNKRIFGRKKSVHHLLGGGKSADV 60

Query: 61  LLWKNKKISASVLTGATIIWILFEWLSYHFLTIVCFALVLGMLFQFIWTNASGFLDRTSS 120
           LLWKNKKISASVLTGATIIWILFEWLSYH LTIVCFALVLGMLFQFIWTN SGFLDRTSS
Sbjct: 61  LLWKNKKISASVLTGATIIWILFEWLSYHLLTIVCFALVLGMLFQFIWTNTSGFLDRTSS 120

Query: 121 NVPHFDLPEELFVEIAVSFGAEVNRALHFLQDIACNGDLKQFLGAVVSLWXXXXXXXXXX 180
           NVPH DLPEELFVEIAVSFGAEVNRALHFLQDIACNGDLKQFLGAVVSLWXXXXXXXXXX
Sbjct: 121 NVPHLDLPEELFVEIAVSFGAEVNRALHFLQDIACNGDLKQFLGAVVSLWXXXXXXXXXX 180

Query: 181 XXXXXXXGFVAAHTLPILYEKYEDEVDTFAFNVFDQLCGHFQKLDSSVLSKIPRGGPLPE 240
           XXXXXXXGFVAAHTLPILYEKYEDEVDTF+FNVFDQLCGHFQKLDSSVLSKIPRGGPLPE
Sbjct: 181 XXXXXXXGFVAAHTLPILYEKYEDEVDTFSFNVFDQLCGHFQKLDSSVLSKIPRGGPLPE 240

Query: 241 KKHE 245
           KKHE
Sbjct: 241 KKHE 244

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BLAST of Carg11401 vs. NCBI nr
Match: XP_011653261.1 (PREDICTED: reticulon-like protein B8 [Cucumis sativus] >XP_011653262.1 PREDICTED: reticulon-like protein B8 [Cucumis sativus] >KGN53509.1 hypothetical protein Csa_4G063430 [Cucumis sativus])

HSP 1 Score: 324.3 bits (830), Expect = 3.5e-85
Identity = 171/250 (68.40%), Postives = 192/250 (76.80%), Query Frame = 0


Query: 1   MSENVPAKDLPQNFSEAPAERGHKAESV------SSPCSVAGRKKRIFGRKKSVHHLLGG 60
           MSE + A+D   N SE   E G K +SV      S   SVAG+  RIFGR+K V++LLGG
Sbjct: 1   MSEKMTAEDFINNISEVLTEHGQKGKSVSFFGEDSKSSSVAGQINRIFGRQKPVYNLLGG 60

Query: 61  GISADVLLWKNKKISASVLTGATIIWILFEWLSYHFLTIVCFALVLGMLFQFIWTNASGF 120
           G SADVLLW+NKKISASVLTGATIIW+LFEWL+YHFLT+VCFALVLGML QF+WTNASGF
Sbjct: 61  GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQFMWTNASGF 120

Query: 121 LDRTSSNVPHFDLPEELFVEIAVSFGAEVNRALHFLQDIACNGDLKQFLGAVVSLWXXXX 180
           L+R+SSNVP   LP+ELFV IAV+FGAEVNRAL +LQDIAC G+LK FL AVVSLW    
Sbjct: 121 LNRSSSNVPRLVLPKELFVNIAVTFGAEVNRALCYLQDIACEGNLKHFLVAVVSLWVGAV 180

Query: 181 XXXXXXXXXXXXXGFVAAHTLPILYEKYEDEVDTFAFNVFDQLCGHFQKLDSSVLSKIPR 240
                        GFVAAHTLPILYEKYEDEVDTFA+ VFDQLCGH+QK DSSVLSKIPR
Sbjct: 181 ISSWCNFVTVLYIGFVAAHTLPILYEKYEDEVDTFAYKVFDQLCGHYQKFDSSVLSKIPR 240

Query: 241 GGPLPEKKHE 245
           G     KK+E
Sbjct: 241 GA-FKGKKYE 249

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BLAST of Carg11401 vs. TAIR10
Match: AT3G10260.3 (Reticulon family protein)

HSP 1 Score: 252.7 bits (644), Expect = 2.3e-67
Identity = 120/227 (52.86%), Postives = 159/227 (70.04%), Query Frame = 0


Query: 9   DLPQNFSEAPAERGHKAESVSSPCSVAGRKKRIFGRKKSVHHLLGGGISADVLLWKNKKI 68
           DL  NF+E   +  H +       SV+ R  R+F R+K +HH+LGGG SADVLLW+NKKI
Sbjct: 33  DLVDNFTETVQKNKHGSSFFEQEDSVSSRFNRLFDRQKPIHHVLGGGKSADVLLWRNKKI 92

Query: 69  SASVLTGATIIWILFEWLSYHFLTIVCFALVLGMLFQFIWTNASGFLDRTSSNVPHFDLP 128
           SASVL GAT IW+LFEW+++HFL++VC+AL+LGM+ QF+W+NASGFL+R+ S VP   LP
Sbjct: 93  SASVLMGATAIWVLFEWINFHFLSLVCYALLLGMIAQFVWSNASGFLNRSQSRVPRLVLP 152

Query: 129 EELFVEIAVSFGAEVNRALHFLQDIACNGDLKQFLGAVVSLWXXXXXXXXXXXXXXXXXG 188
           ++ F E+ V+ G EVNR L FLQD+AC G+LKQFL AV+ LW                 G
Sbjct: 153 KDFFAEVGVAVGKEVNRGLLFLQDLACKGNLKQFLMAVIGLWVAAMVGSCCNFLTVLYIG 212

Query: 189 FVAAHTLPILYEKYEDEVDTFAFNVFDQLCGHFQKLDSSVLSKIPRG 236
           FV AHT+P+LYE+YEDEVD F  ++  +   H++KLD+  LS+IP G
Sbjct: 213 FVGAHTMPVLYERYEDEVDGFMDSMIMKFHSHYKKLDTGFLSRIPSG 259

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BLAST of Carg11401 vs. TAIR10
Match: AT4G11220.1 (VIRB2-interacting protein 2)

HSP 1 Score: 169.9 bits (429), Expect = 2.0e-42
Identity = 78/212 (36.79%), Postives = 126/212 (59.43%), Query Frame = 0


Query: 33  SVAGRKKRIFGRKKSVHHLLGGGISADVLLWKNKKISASVLTGATIIWILFEWLSYHFLT 92
           S+  +  R+FGR++ VH +LGGG  AD+ +WK+KK+S  V  GAT+ W+LFE + YH LT
Sbjct: 61  SLKSKVYRLFGRERPVHKVLGGGKPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLT 120

Query: 93  IVCFALVLGMLFQFIWTNASGFLDRTSSNVPHFDLPEELFVEIAVSFGAEVNRALHFLQD 152
           ++C  +++ +   F+W+NA+ F+ ++   +P   +PEE  +++A     E+NR +  L++
Sbjct: 121 LLCHVMIVALAVLFLWSNATMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLRE 180

Query: 153 IACNGDLKQFLGAVVSLWXXXXXXXXXXXXXXXXXGFVAAHTLPILYEKYEDEVDTFAFN 212
           IA   D+K+FL A+  LW                   V   T+P+ Y+KYED+VD++   
Sbjct: 181 IASGRDIKKFLSAIAGLWVLSILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEK 240

Query: 213 VFDQLCGHFQKLDSSVLSKIPRGGPLPEKKHE 245
              +L   +  LD+ V SKIPR GPL +KK +
Sbjct: 241 AMAELKKQYAVLDAKVFSKIPR-GPLKDKKKD 271

[Close]

BLAST of Carg11401 vs. TAIR10
Match: AT2G46170.1 (Reticulon family protein)

HSP 1 Score: 167.9 bits (424), Expect = 7.6e-42
Identity = 87/208 (41.83%), Postives = 122/208 (58.65%), Query Frame = 0


Query: 26  ESVSSPCSVAGRKKRIFGRKKSVHHLLGGGISADVLLWKNKKISASVLTGATIIWILFEW 85
           E   SP +V  +  R+FGR+K VH +LGGG  ADV LW++KK+S +VL  AT IW+LFE 
Sbjct: 37  EKPDSPSAVKAKIYRMFGREKPVHKVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLFEL 96

Query: 86  LSYHFLTIVCFALVLGMLFQFIWTNASGFLDRTSSNVPHFDLPEELFVEIAVSFGAEVNR 145
           + YH L+++C   +L +   F+W+NA   +++TS  +P   +PEE F+ +A S   E+N+
Sbjct: 97  VEYHLLSLLCHISILALGGLFLWSNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQ 156

Query: 146 ALHFLQDIACNGDLKQFLGAVVSLWXXXXXXXXXXXXXXXXXGFVAAHTLPILYEKYEDE 205
           A   L+ IA   DLK+FL  VV LW                  FV  HT+P+LYEK+ED+
Sbjct: 157 AFVILRSIALGRDLKKFLMVVVGLWIISVVGNWFNFLTLVYICFVILHTVPMLYEKHEDK 216

Query: 206 VDTFAFNVFDQLCGHFQKLDSSVLSKIP 234
           VD  A     +L   +   D  VLSKIP
Sbjct: 217 VDPLAEKAMKELQKQYVVFDEKVLSKIP 244

[Close]

BLAST of Carg11401 vs. TAIR10
Match: AT4G23630.1 (VIRB2-interacting protein 1)

HSP 1 Score: 163.3 bits (412), Expect = 1.9e-40
Identity = 79/205 (38.54%), Postives = 119/205 (58.05%), Query Frame = 0


Query: 40  RIFGRKKSVHHLLGGGISADVLLWKNKKISASVLTGATIIWILFEWLSYHFLTIVCFALV 99
           R+FGR++ VH +LGGG  AD+ +WKNKK+S  VL GAT  W++FE + YH LT++C  ++
Sbjct: 72  RLFGREQPVHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMI 131

Query: 100 LGMLFQFIWTNASGFLDRTSSNVPHFDLPEELFVEIAVSFGAEVNRALHFLQDIACNGDL 159
           + +   F+W+NA+ F++++   +P   +PEE  +++A     E+NR    L++IA   DL
Sbjct: 132 VVLAVLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDL 191

Query: 160 KQFLGAVVSLWXXXXXXXXXXXXXXXXXGFVAAHTLPILYEKYEDEVDTFAFNVFDQLCG 219
           K+FL A+  LW                   V   T+P+ Y+KYED+VD        +L  
Sbjct: 192 KKFLIAIAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKK 251

Query: 220 HFQKLDSSVLSKIPRGGPLPEKKHE 245
            +  LD  VLSKIP  GPL  KK +
Sbjct: 252 QYAVLDEKVLSKIPL-GPLKNKKKD 275

[Close]

BLAST of Carg11401 vs. TAIR10
Match: AT5G41600.1 (VIRB2-interacting protein 3)

HSP 1 Score: 150.6 bits (379), Expect = 1.3e-36
Identity = 75/207 (36.23%), Postives = 113/207 (54.59%), Query Frame = 0


Query: 40  RIFGRKKSVHHLLGGGISADVLLWKNKKISASVLTGATIIWILFEWLSYHFLTIVCFALV 99
           R+FGR+K VH +LGGG  AD+ LW+NKK+S  VL   T  W+LFE   YH L  +C   +
Sbjct: 51  RLFGREKPVHKVLGGGKPADIFLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAI 110

Query: 100 LGMLFQFIWTNASGFLDRTSSNVPHFDLPEELFVEIAVSFGAEVNRALHFLQDIACNGDL 159
             +   F+W+NA  F+ +++ ++P   +PE+  +++      E+NR L  L++IA   D+
Sbjct: 111 FALAALFLWSNACTFIHKSTPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDV 170

Query: 160 KQFLGAVVSLWXXXXXXXXXXXXXXXXXGFVAAHTLPILYEKYEDEVDTFAFNVFDQLCG 219
           K+F+  +  LW                   V   T+P+LYEKYED+VD +      ++  
Sbjct: 171 KKFILVIAGLWVLSIIGSCYNFLTLFYTATVLLFTIPVLYEKYEDKVDAYGEKAMREIKK 230

Query: 220 HFQKLDSSVL----SKIPRGGPLPEKK 243
            +  LD  VL    SKIPRG  L +KK
Sbjct: 231 QYAVLDEKVLRKVISKIPRGA-LNKKK 256

[Close]

BLAST of Carg11401 vs. Swiss-Prot
Match: sp|Q9SS37|RTNLH_ARATH (Reticulon-like protein B8 OS=Arabidopsis thaliana OX=3702 GN=RTNLB8 PE=2 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 4.2e-66
Identity = 120/227 (52.86%), Postives = 159/227 (70.04%), Query Frame = 0


Query: 9   DLPQNFSEAPAERGHKAESVSSPCSVAGRKKRIFGRKKSVHHLLGGGISADVLLWKNKKI 68
           DL  NF+E   +  H +       SV+ R  R+F R+K +HH+LGGG SADVLLW+NKKI
Sbjct: 13  DLVDNFTETVQKNKHGSSFFEQEDSVSSRFNRLFDRQKPIHHVLGGGKSADVLLWRNKKI 72

Query: 69  SASVLTGATIIWILFEWLSYHFLTIVCFALVLGMLFQFIWTNASGFLDRTSSNVPHFDLP 128
           SASVL GAT IW+LFEW+++HFL++VC+AL+LGM+ QF+W+NASGFL+R+ S VP   LP
Sbjct: 73  SASVLMGATAIWVLFEWINFHFLSLVCYALLLGMIAQFVWSNASGFLNRSQSRVPRLVLP 132

Query: 129 EELFVEIAVSFGAEVNRALHFLQDIACNGDLKQFLGAVVSLWXXXXXXXXXXXXXXXXXG 188
           ++ F E+ V+ G EVNR L FLQD+AC G+LKQFL AV+ LW                 G
Sbjct: 133 KDFFAEVGVAVGKEVNRGLLFLQDLACKGNLKQFLMAVIGLWVAAMVGSCCNFLTVLYIG 192

Query: 189 FVAAHTLPILYEKYEDEVDTFAFNVFDQLCGHFQKLDSSVLSKIPRG 236
           FV AHT+P+LYE+YEDEVD F  ++  +   H++KLD+  LS+IP G
Sbjct: 193 FVGAHTMPVLYERYEDEVDGFMDSMIMKFHSHYKKLDTGFLSRIPSG 239

[Close]

BLAST of Carg11401 vs. Swiss-Prot
Match: sp|Q9SUT9|RTNLB_ARATH (Reticulon-like protein B2 OS=Arabidopsis thaliana OX=3702 GN=RTNLB2 PE=1 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 3.6e-41
Identity = 78/212 (36.79%), Postives = 126/212 (59.43%), Query Frame = 0


Query: 33  SVAGRKKRIFGRKKSVHHLLGGGISADVLLWKNKKISASVLTGATIIWILFEWLSYHFLT 92
           S+  +  R+FGR++ VH +LGGG  AD+ +WK+KK+S  V  GAT+ W+LFE + YH LT
Sbjct: 61  SLKSKVYRLFGRERPVHKVLGGGKPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLT 120

Query: 93  IVCFALVLGMLFQFIWTNASGFLDRTSSNVPHFDLPEELFVEIAVSFGAEVNRALHFLQD 152
           ++C  +++ +   F+W+NA+ F+ ++   +P   +PEE  +++A     E+NR +  L++
Sbjct: 121 LLCHVMIVALAVLFLWSNATMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLRE 180

Query: 153 IACNGDLKQFLGAVVSLWXXXXXXXXXXXXXXXXXGFVAAHTLPILYEKYEDEVDTFAFN 212
           IA   D+K+FL A+  LW                   V   T+P+ Y+KYED+VD++   
Sbjct: 181 IASGRDIKKFLSAIAGLWVLSILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEK 240

Query: 213 VFDQLCGHFQKLDSSVLSKIPRGGPLPEKKHE 245
              +L   +  LD+ V SKIPR GPL +KK +
Sbjct: 241 AMAELKKQYAVLDAKVFSKIPR-GPLKDKKKD 271

[Close]

BLAST of Carg11401 vs. Swiss-Prot
Match: sp|Q6DBN4|RTNLF_ARATH (Reticulon-like protein B6 OS=Arabidopsis thaliana OX=3702 GN=RTNLB6 PE=1 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 1.0e-40
Identity = 85/204 (41.67%), Postives = 121/204 (59.31%), Query Frame = 0


Query: 30  SPCSVAGRKKRIFGRKKSVHHLLGGGISADVLLWKNKKISASVLTGATIIWILFEWLSYH 89
           SP ++  +  R+FGR+K VH +LGGG+ ADV LW++KK+SASVL  AT IW+LFE + YH
Sbjct: 41  SPSALKAKIYRLFGREKPVHKVLGGGLPADVFLWRDKKLSASVLGVATAIWVLFELVEYH 100

Query: 90  FLTIVCFALVLGMLFQFIWTNASGFLDRTSSNVPHFDLPEELFVEIAVSFGAEVNRALHF 149
           FL++VC  L+  +   F+ +NA  F+++T   +P   + EE F+ I  +   E+N+A   
Sbjct: 101 FLSLVCHILIFALAALFLLSNAHAFMNKTPPKIPEIHIKEEHFLMIVSALRNELNQAFVI 160

Query: 150 LQDIACNGDLKQFLGAVVSLWXXXXXXXXXXXXXXXXXGFVAAHTLPILYEKYEDEVDTF 209
           L+ IA   DLK+FL  V  LW                  FV  HT+P+LYEK+ED+VD  
Sbjct: 161 LRSIALGRDLKKFLMVVFGLWIISVVGNWFNFLTLVYICFVVLHTVPMLYEKHEDKVDPV 220

Query: 210 AFNVFDQLCGHFQKLDSSVLSKIP 234
           A     +L  H+   D  VLSK+P
Sbjct: 221 AEKTLKELKKHYMVFDEKVLSKLP 244

[Close]

BLAST of Carg11401 vs. Swiss-Prot
Match: sp|O82352|RTNLE_ARATH (Reticulon-like protein B5 OS=Arabidopsis thaliana OX=3702 GN=RTNLB5 PE=1 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.4e-40
Identity = 87/208 (41.83%), Postives = 122/208 (58.65%), Query Frame = 0


Query: 26  ESVSSPCSVAGRKKRIFGRKKSVHHLLGGGISADVLLWKNKKISASVLTGATIIWILFEW 85
           E   SP +V  +  R+FGR+K VH +LGGG  ADV LW++KK+S +VL  AT IW+LFE 
Sbjct: 37  EKPDSPSAVKAKIYRMFGREKPVHKVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLFEL 96

Query: 86  LSYHFLTIVCFALVLGMLFQFIWTNASGFLDRTSSNVPHFDLPEELFVEIAVSFGAEVNR 145
           + YH L+++C   +L +   F+W+NA   +++TS  +P   +PEE F+ +A S   E+N+
Sbjct: 97  VEYHLLSLLCHISILALGGLFLWSNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQ 156

Query: 146 ALHFLQDIACNGDLKQFLGAVVSLWXXXXXXXXXXXXXXXXXGFVAAHTLPILYEKYEDE 205
           A   L+ IA   DLK+FL  VV LW                  FV  HT+P+LYEK+ED+
Sbjct: 157 AFVILRSIALGRDLKKFLMVVVGLWIISVVGNWFNFLTLVYICFVILHTVPMLYEKHEDK 216

Query: 206 VDTFAFNVFDQLCGHFQKLDSSVLSKIP 234
           VD  A     +L   +   D  VLSKIP
Sbjct: 217 VDPLAEKAMKELQKQYVVFDEKVLSKIP 244

[Close]

BLAST of Carg11401 vs. Swiss-Prot
Match: sp|Q9SUR3|RTNLA_ARATH (Reticulon-like protein B1 OS=Arabidopsis thaliana OX=3702 GN=RTNLB1 PE=1 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 3.4e-39
Identity = 79/205 (38.54%), Postives = 119/205 (58.05%), Query Frame = 0


Query: 40  RIFGRKKSVHHLLGGGISADVLLWKNKKISASVLTGATIIWILFEWLSYHFLTIVCFALV 99
           R+FGR++ VH +LGGG  AD+ +WKNKK+S  VL GAT  W++FE + YH LT++C  ++
Sbjct: 72  RLFGREQPVHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMI 131

Query: 100 LGMLFQFIWTNASGFLDRTSSNVPHFDLPEELFVEIAVSFGAEVNRALHFLQDIACNGDL 159
           + +   F+W+NA+ F++++   +P   +PEE  +++A     E+NR    L++IA   DL
Sbjct: 132 VVLAVLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDL 191

Query: 160 KQFLGAVVSLWXXXXXXXXXXXXXXXXXGFVAAHTLPILYEKYEDEVDTFAFNVFDQLCG 219
           K+FL A+  LW                   V   T+P+ Y+KYED+VD        +L  
Sbjct: 192 KKFLIAIAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKK 251

Query: 220 HFQKLDSSVLSKIPRGGPLPEKKHE 245
            +  LD  VLSKIP  GPL  KK +
Sbjct: 252 QYAVLDEKVLSKIPL-GPLKNKKKD 275

[Close]

BLAST of Carg11401 vs. TrEMBL
Match: tr|A0A0A0KXG6|A0A0A0KXG6_CUCSA (Reticulon-like protein OS=Cucumis sativus OX=3659 GN=Csa_4G063430 PE=4 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 2.3e-85
Identity = 171/250 (68.40%), Postives = 192/250 (76.80%), Query Frame = 0


Query: 1   MSENVPAKDLPQNFSEAPAERGHKAESV------SSPCSVAGRKKRIFGRKKSVHHLLGG 60
           MSE + A+D   N SE   E G K +SV      S   SVAG+  RIFGR+K V++LLGG
Sbjct: 1   MSEKMTAEDFINNISEVLTEHGQKGKSVSFFGEDSKSSSVAGQINRIFGRQKPVYNLLGG 60

Query: 61  GISADVLLWKNKKISASVLTGATIIWILFEWLSYHFLTIVCFALVLGMLFQFIWTNASGF 120
           G SADVLLW+NKKISASVLTGATIIW+LFEWL+YHFLT+VCFALVLGML QF+WTNASGF
Sbjct: 61  GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQFMWTNASGF 120

Query: 121 LDRTSSNVPHFDLPEELFVEIAVSFGAEVNRALHFLQDIACNGDLKQFLGAVVSLWXXXX 180
           L+R+SSNVP   LP+ELFV IAV+FGAEVNRAL +LQDIAC G+LK FL AVVSLW    
Sbjct: 121 LNRSSSNVPRLVLPKELFVNIAVTFGAEVNRALCYLQDIACEGNLKHFLVAVVSLWVGAV 180

Query: 181 XXXXXXXXXXXXXGFVAAHTLPILYEKYEDEVDTFAFNVFDQLCGHFQKLDSSVLSKIPR 240
                        GFVAAHTLPILYEKYEDEVDTFA+ VFDQLCGH+QK DSSVLSKIPR
Sbjct: 181 ISSWCNFVTVLYIGFVAAHTLPILYEKYEDEVDTFAYKVFDQLCGHYQKFDSSVLSKIPR 240

Query: 241 GGPLPEKKHE 245
           G     KK+E
Sbjct: 241 GA-FKGKKYE 249

[Close]

BLAST of Carg11401 vs. TrEMBL
Match: tr|A0A1S3BT84|A0A1S3BT84_CUCME (Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103493007 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 3.9e-85
Identity = 171/250 (68.40%), Postives = 194/250 (77.60%), Query Frame = 0


Query: 1   MSENVPAKDLPQNFSEAPAERGHKAESVS------SPCSVAGRKKRIFGRKKSVHHLLGG 60
           MSE + A+DL  N SE  AE G K +SVS         SVAG+  RIFGR+K V++LLGG
Sbjct: 4   MSEKMIAEDLFNNISEVLAEHGQKGKSVSFFGEDNKASSVAGQINRIFGRQKPVYNLLGG 63

Query: 61  GISADVLLWKNKKISASVLTGATIIWILFEWLSYHFLTIVCFALVLGMLFQFIWTNASGF 120
           G SADVLLW+NKKISASVLTGATIIW+LFEWL+YHFLT+VCFALVLGML QFIWTNASGF
Sbjct: 64  GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQFIWTNASGF 123

Query: 121 LDRTSSNVPHFDLPEELFVEIAVSFGAEVNRALHFLQDIACNGDLKQFLGAVVSLWXXXX 180
           L+R+SSNVP   LP+ELFV IAV+FGAEVNRAL +LQDIAC G+LK FL AV+SLW    
Sbjct: 124 LNRSSSNVPRLVLPKELFVNIAVTFGAEVNRALCYLQDIACEGNLKHFLVAVLSLWVGAV 183

Query: 181 XXXXXXXXXXXXXGFVAAHTLPILYEKYEDEVDTFAFNVFDQLCGHFQKLDSSVLSKIPR 240
                        GFVAAHTLPILYEKYEDEVDTFA+ VFDQLCGH++K DSSVLSKIP+
Sbjct: 184 ISSWCNFITVLYVGFVAAHTLPILYEKYEDEVDTFAYKVFDQLCGHYRKFDSSVLSKIPK 243

Query: 241 GGPLPEKKHE 245
           G     KK+E
Sbjct: 244 GA-FKGKKYE 252

[Close]

BLAST of Carg11401 vs. TrEMBL
Match: tr|A0A1S4DYY0|A0A1S4DYY0_CUCME (Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103493007 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 3.9e-85
Identity = 171/250 (68.40%), Postives = 194/250 (77.60%), Query Frame = 0


Query: 1   MSENVPAKDLPQNFSEAPAERGHKAESVS------SPCSVAGRKKRIFGRKKSVHHLLGG 60
           MSE + A+DL  N SE  AE G K +SVS         SVAG+  RIFGR+K V++LLGG
Sbjct: 8   MSEKMIAEDLFNNISEVLAEHGQKGKSVSFFGEDNKASSVAGQINRIFGRQKPVYNLLGG 67

Query: 61  GISADVLLWKNKKISASVLTGATIIWILFEWLSYHFLTIVCFALVLGMLFQFIWTNASGF 120
           G SADVLLW+NKKISASVLTGATIIW+LFEWL+YHFLT+VCFALVLGML QFIWTNASGF
Sbjct: 68  GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQFIWTNASGF 127

Query: 121 LDRTSSNVPHFDLPEELFVEIAVSFGAEVNRALHFLQDIACNGDLKQFLGAVVSLWXXXX 180
           L+R+SSNVP   LP+ELFV IAV+FGAEVNRAL +LQDIAC G+LK FL AV+SLW    
Sbjct: 128 LNRSSSNVPRLVLPKELFVNIAVTFGAEVNRALCYLQDIACEGNLKHFLVAVLSLWVGAV 187

Query: 181 XXXXXXXXXXXXXGFVAAHTLPILYEKYEDEVDTFAFNVFDQLCGHFQKLDSSVLSKIPR 240
                        GFVAAHTLPILYEKYEDEVDTFA+ VFDQLCGH++K DSSVLSKIP+
Sbjct: 188 ISSWCNFITVLYVGFVAAHTLPILYEKYEDEVDTFAYKVFDQLCGHYRKFDSSVLSKIPK 247

Query: 241 GGPLPEKKHE 245
           G     KK+E
Sbjct: 248 GA-FKGKKYE 256

[Close]

BLAST of Carg11401 vs. TrEMBL
Match: tr|A0A1S4DYY9|A0A1S4DYY9_CUCME (Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103493007 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 3.9e-85
Identity = 171/250 (68.40%), Postives = 194/250 (77.60%), Query Frame = 0


Query: 1   MSENVPAKDLPQNFSEAPAERGHKAESVS------SPCSVAGRKKRIFGRKKSVHHLLGG 60
           MSE + A+DL  N SE  AE G K +SVS         SVAG+  RIFGR+K V++LLGG
Sbjct: 20  MSEKMIAEDLFNNISEVLAEHGQKGKSVSFFGEDNKASSVAGQINRIFGRQKPVYNLLGG 79

Query: 61  GISADVLLWKNKKISASVLTGATIIWILFEWLSYHFLTIVCFALVLGMLFQFIWTNASGF 120
           G SADVLLW+NKKISASVLTGATIIW+LFEWL+YHFLT+VCFALVLGML QFIWTNASGF
Sbjct: 80  GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQFIWTNASGF 139

Query: 121 LDRTSSNVPHFDLPEELFVEIAVSFGAEVNRALHFLQDIACNGDLKQFLGAVVSLWXXXX 180
           L+R+SSNVP   LP+ELFV IAV+FGAEVNRAL +LQDIAC G+LK FL AV+SLW    
Sbjct: 140 LNRSSSNVPRLVLPKELFVNIAVTFGAEVNRALCYLQDIACEGNLKHFLVAVLSLWVGAV 199

Query: 181 XXXXXXXXXXXXXGFVAAHTLPILYEKYEDEVDTFAFNVFDQLCGHFQKLDSSVLSKIPR 240
                        GFVAAHTLPILYEKYEDEVDTFA+ VFDQLCGH++K DSSVLSKIP+
Sbjct: 200 ISSWCNFITVLYVGFVAAHTLPILYEKYEDEVDTFAYKVFDQLCGHYRKFDSSVLSKIPK 259

Query: 241 GGPLPEKKHE 245
           G     KK+E
Sbjct: 260 GA-FKGKKYE 268

[Close]

BLAST of Carg11401 vs. TrEMBL
Match: tr|A0A1S4DYZ3|A0A1S4DYZ3_CUCME (Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103493007 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 3.9e-85
Identity = 171/250 (68.40%), Postives = 194/250 (77.60%), Query Frame = 0


Query: 1   MSENVPAKDLPQNFSEAPAERGHKAESVS------SPCSVAGRKKRIFGRKKSVHHLLGG 60
           MSE + A+DL  N SE  AE G K +SVS         SVAG+  RIFGR+K V++LLGG
Sbjct: 49  MSEKMIAEDLFNNISEVLAEHGQKGKSVSFFGEDNKASSVAGQINRIFGRQKPVYNLLGG 108

Query: 61  GISADVLLWKNKKISASVLTGATIIWILFEWLSYHFLTIVCFALVLGMLFQFIWTNASGF 120
           G SADVLLW+NKKISASVLTGATIIW+LFEWL+YHFLT+VCFALVLGML QFIWTNASGF
Sbjct: 109 GKSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQFIWTNASGF 168

Query: 121 LDRTSSNVPHFDLPEELFVEIAVSFGAEVNRALHFLQDIACNGDLKQFLGAVVSLWXXXX 180
           L+R+SSNVP   LP+ELFV IAV+FGAEVNRAL +LQDIAC G+LK FL AV+SLW    
Sbjct: 169 LNRSSSNVPRLVLPKELFVNIAVTFGAEVNRALCYLQDIACEGNLKHFLVAVLSLWVGAV 228

Query: 181 XXXXXXXXXXXXXGFVAAHTLPILYEKYEDEVDTFAFNVFDQLCGHFQKLDSSVLSKIPR 240
                        GFVAAHTLPILYEKYEDEVDTFA+ VFDQLCGH++K DSSVLSKIP+
Sbjct: 229 ISSWCNFITVLYVGFVAAHTLPILYEKYEDEVDTFAYKVFDQLCGHYRKFDSSVLSKIPK 288

Query: 241 GGPLPEKKHE 245
           G     KK+E
Sbjct: 289 GA-FKGKKYE 297

The following BLAST results are available for this feature:

BLAST of Carg11401 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023521769.1	1.0e-116	95.49	reticulon-like protein B8 [Cucurbita pepo subsp. pepo] >XP_023521770.1 reticulon...	[more]
XP_022931540.1	1.9e-115	94.26	reticulon-like protein B8 isoform X2 [Cucurbita moschata] >XP_022931541.1 reticu...	[more]
XP_022931539.1	1.9e-115	94.26	reticulon-like protein B8 isoform X1 [Cucurbita moschata]	[more]
XP_022984169.1	1.9e-115	94.67	reticulon-like protein B8 [Cucurbita maxima] >XP_022984170.1 reticulon-like prot...	[more]
XP_011653261.1	3.5e-85	68.40	PREDICTED: reticulon-like protein B8 [Cucumis sativus] >XP_011653262.1 PREDICTED...	[more]

BLAST of Carg11401 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G10260.3	2.3e-67	52.86	Reticulon family protein	[more]
AT4G11220.1	2.0e-42	36.79	VIRB2-interacting protein 2	[more]
AT2G46170.1	7.6e-42	41.83	Reticulon family protein	[more]
AT4G23630.1	1.9e-40	38.54	VIRB2-interacting protein 1	[more]
AT5G41600.1	1.3e-36	36.23	VIRB2-interacting protein 3	[more]

BLAST of Carg11401 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SS37\|RTNLH_ARATH	4.2e-66	52.86	Reticulon-like protein B8 OS=Arabidopsis thaliana OX=3702 GN=RTNLB8 PE=2 SV=1	[more]
sp\|Q9SUT9\|RTNLB_ARATH	3.6e-41	36.79	Reticulon-like protein B2 OS=Arabidopsis thaliana OX=3702 GN=RTNLB2 PE=1 SV=1	[more]
sp\|Q6DBN4\|RTNLF_ARATH	1.0e-40	41.67	Reticulon-like protein B6 OS=Arabidopsis thaliana OX=3702 GN=RTNLB6 PE=1 SV=1	[more]
sp\|O82352\|RTNLE_ARATH	1.4e-40	41.83	Reticulon-like protein B5 OS=Arabidopsis thaliana OX=3702 GN=RTNLB5 PE=1 SV=1	[more]
sp\|Q9SUR3\|RTNLA_ARATH	3.4e-39	38.54	Reticulon-like protein B1 OS=Arabidopsis thaliana OX=3702 GN=RTNLB1 PE=1 SV=1	[more]

BLAST of Carg11401 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KXG6\|A0A0A0KXG6_CUCSA	2.3e-85	68.40	Reticulon-like protein OS=Cucumis sativus OX=3659 GN=Csa_4G063430 PE=4 SV=1	[more]
tr\|A0A1S3BT84\|A0A1S3BT84_CUCME	3.9e-85	68.40	Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103493007 PE=4 SV=1	[more]
tr\|A0A1S4DYY0\|A0A1S4DYY0_CUCME	3.9e-85	68.40	Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103493007 PE=4 SV=1	[more]
tr\|A0A1S4DYY9\|A0A1S4DYY9_CUCME	3.9e-85	68.40	Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103493007 PE=4 SV=1	[more]
tr\|A0A1S4DYZ3\|A0A1S4DYZ3_CUCME	3.9e-85	68.40	Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103493007 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003388	Reticulon

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg11401-RA	Carg11401-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003388	Reticulon	PFAM	PF02453	Reticulon	coord: 58..210 e-value: 6.0E-50 score: 169.2
IPR003388	Reticulon	PROSITE	PS50845	RETICULON	coord: 57..244 score: 42.756
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	PANTHER	PTHR10994:SF62	RETICULON-LIKE PROTEIN B8	coord: 1..244
None	No IPR available	PANTHER	PTHR10994	RETICULON	coord: 1..244

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg11401	Cla005430	Watermelon (97103) v1	carwmB0652
Carg11401	Csa4G063430	Cucumber (Chinese Long) v2	carcuB0677
Carg11401	MELO3C016191	Melon (DHL92) v3.5.1	carmeB0652
Carg11401	ClCG07G010810	Watermelon (Charleston Gray)	carwcgB0637
Carg11401	CSPI04G07270	Wild cucumber (PI 183967)	carcpiB0687
Carg11401	Cucsa.179920	Cucumber (Gy14) v1	carcgyB0732
Carg11401	CmaCh04G006220	Cucurbita maxima (Rimu)	carcmaB0927
Carg11401	CmaCh16G004780	Cucurbita maxima (Rimu)	carcmaB0924
Carg11401	CmoCh04G006690	Cucurbita moschata (Rifu)	carcmoB0902
Carg11401	CmoCh16G005170	Cucurbita moschata (Rifu)	carcmoB0898
Carg11401	Lsi07G008100	Bottle gourd (USVL1VR-Ls)	carlsiB596
Carg11401	Cp4.1LG14g03170	Cucurbita pepo (Zucchini)	carcpeB0926
Carg11401	Cp4.1LG01g01010	Cucurbita pepo (Zucchini)	carcpeB0929
Carg11401	CsGy4G007160	Cucumber (Gy14) v2	carcgybB0652
Carg11401	MELO3C016191.2	Melon (DHL92) v3.6.1	carmedB0662
Carg11401	CsaV3_4G007510	Cucumber (Chinese Long) v3	carcucB0689
Carg11401	Cla97C07G137550	Watermelon (97103) v2	carwmbB0682
Carg11401	Bhi01G002394	Wax gourd	carwgoB0770

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg11401	Carg13123	Silver-seed gourd	carcarB050

The following block(s) are covering this gene:


Gene	Organism	Block
Carg11401	Silver-seed gourd	carcarB052