Cucsa.178480 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.178480
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	RNA-binding family protein
Location	scaffold01227 : 704640 .. 714032 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCTTTTCCGAAAAATGCCCCTTTTTTTTCCTTTGTAAAATAAGAAGTTGGGTAACCTGAATCCAAAAGTTCTCAAACTTGTTTTAATTTGTAAATTTTTTTGTAGTGCGCTACCCGGCAAAGCTCGCGATTCCCAGATTGTGAGAATCGGAGCATTTTCTTAATTGTCGTTGGCCATGGCGGGTCCTTCCTCGGCTCCTTCGTCAGCTTCTTCCTCTTCAGCTTCCCAATTTACGTATTCAAACGGTTCTTACTTTCCTTTACCTTTCCATCTCCAGCAGTCTGCTCCAGCACCTGCACCCCCCCAGTATTCTTCTCCCTATGTCGCTCCTCCAGGCCCTCCCCCAGTTCCCCTCCCCGTCGCACCTGTTTATCCTGCTCCTGCTCCGCCTCCGGCGGTCTATACTCTCCCTCAATACCAGCAGGTACCAAAATATGCTTACGACTTCAATTTTTACTTCGAAGTTCTGCTTTTCATTTATTTTTGATAGGGTTTGTGGGAATTGTTTTGCTCGATAATGGGTTTTTCTTTTTTAAATTTCAATTTATGGGTTTAGCATGGTTGTATTTGTTTTTTCTTTTTCCTATTTTATTTATTTATTTATTATGAACAGGCCCAACAATTGTTTCAAAGGGATGCTCAAACCATAACACCGGAAGCTCTTGAGAGTGTTAAAGCTGCTCTTGCAAGTAGTGAGATTGAGCATAAAGCAGAAACAAAAAAGAAAGCTATTCCTCGCAAAGCTGCCGGGCAATCTTGGGAGGATCCAACTCTTGCTGAGTGGCCTGAAAGTATGCATTTTCTACTTTCTTTTACTTCACTTGTTTGCAATCATTGGACTTATTGAAAAAAAAATGTTTGGCTAGGAATAGTTATATTTGTTCCGGATCTTTAATATCAGCTTGAATCGATAGATGTTGTTTTTAATTACTGCATCTCTCACATCTTTTAACCTCGGATAGTTGGTTTTGGATTTGAGATCCCCATTGAAATTTCTTAGTCAAGTCCTCAATGCATGATTTTATTTTAAAAGGGAAAGGTAAGAACCCTCCATTTGAGTCTTTATGGAAATTGGAAGAGGGATCATCCGAAGAAAACTAAAGCCTTTATTTGGGGCTCAGTTATGGTGGTTTGAATACAGGAAAGATATTGCAAACAAGGCAAACCTTTTCATTGAAATAATGAAATGAGCCTAATACTCAAAGTACAAAAGATGATACAAAATGTAAACTTGCCAGTACAAAAGAAGTAATACGAGACTAGTTCAAGATTTAACTAATTGTAGAAGAGAGGATAGCACATTCCAGTTTAGAAAAAGTCTTGAATTGAGGAAAAAGTCTGCAATTGAGAAAACTGCAATTTTTTTTTGAAAGTGAGCACTGGGAGTTTCCCAAATCATAACCCAAATGAAGACCTTGACTTCTCCTTTGACAGCTTAAGTTCCGTTGAATCCAAATAACCAGCTTCTTGAGGCTCACCTAGCAACCATCCATTGACCCACTAAATATGCAAATAACCACTGGAATTCCCACACTTCATGTTTGGGATTAGAAGCAATTCTGAGTAGACTTGGAAAAAGAGAACTCAAACCAAATGAAATTAGCCGAAATAATGCCGAGAAGAAATCTTGCTGGTATAACCAAGTTAAAACTTAAAAGAAGCAAGATGATCTACATCTACTTGTAACCAATCTCAAGAAAATGAAAAACTGCTAATCTTATCAAGTGAAGGAGGAGATACTATTTTTGACTTGTCTGTTGGACTTCCACAATTTTTTCTTTGCCTGAGAGTGACCGTTGGTTTCCATGTGAACTGAAGCGAAAGGATAAATCTGGTTTCCTTTCCAAAATTGGACTTCCACAATTGGTTTATTGCTTGTCAAGGAGTCTCTAAATCTCAAATTCACTTATTTGTTCAATGCAAACTTGCCCAAAGATCTCGCAATTTAATATTGGAGGCATTTGATTGCCCCTGAGCCATGTCGGACTACATCTAAGTTTTTTTTTTTTGATGAAATCAACCACTTTAATCAAGAAAGAAAATGAAAGAATACACTAGCATACAAAAAACAAACCTAACAAAAAGAACTCGCTTCACAAGAAGGGACTCCAACTATGTGAAATCACATCTGTAGAATAGTTACACAATGTCTTCAAGATTGAAATCCAAAGAGAAACATGAAAATAAACAAGGTACCATAACTCCCAAGGATCCTTCTCCACCCCCTAAAGTCTAAACACCTTACTGTTCTGCTCACCCCACAAGATCCATATAGGTAGGTCACTTTTTAAACCATCTAAGGAACTACAATGGGAGGATATCATCATTTCATCAGAGGATTTCGATAGTGTATCTTTCTCCTTTGGTCGATTTTTGGATTTCTTCTTTTTCAATCCTTTTTACTGATGTAAATGTATTGATCCATTTAAAGATTGTAGCGTTACTTCGTAAGTCACTTCTTGAACATTATTTTTGTAACCCACCATTAGTGGTTGGATTTTACCTCTTTGTAATTTCATTAATTAATGAATTAGTTAACTTTTTTTCTGTCCAAAAAATGTAAAACAATACAAAAAGAAAAACCAAAAGTAAGAGGTCCTTCGCTAAATGACTTTTAATATTTCTTGAGGTGGTAAGGAGCCATGAAGGAATAAGGATGTTGCTAACATTATGGAAAGAAAGGAAATGTATGGTTTTTCAAGGAAACCTAAGAAGTCAATGGAAAGTCTCATTGCTTTCCGAAGGGAGTTATCTTTTTGTTATCTTCTTGGTGTTAAATGGTTTGCCTCTATACTTCTTTCTCTCTCTTCTTGAAGCTTCTAAAGGGGCCATTAATGGTAAGGAGAGGTCGATCGGAGATTTTTTTTGGGATGAGTTGGCTGTAATCTGGGGAAGCATTTGGTGAATTGGAAGACCAACCACCTCTCTCCCCCTTATTCAGGAAGGCCTTGGGATTGATTTAGCTCTCCTTACAAAAGAACAGTGTTGTAGATTCACTTTGGAAAAGGTGCTTTGGTGGAAGGTGTTGGACAACATATCGGGGAAGACCTGGTCTTTGTTTTGATGTCACGAAGACTGTGCCTTTGTTTCAGAAATTTTATCGATATAAGTAGGGTAATGGGCGGCATATTAGATCTCTTTTAGATGTTTGGGTTGACTCAAATGCTCTTCAGGATCATAGATCTGTGGTATTTCTCTGAATAAAAACACTTCTGTGTCTGGTTGTTAGGATGATGAGACAGACATCTGGAACCCTAACTTCAGAAGTGGGATTGGCTAACTGAGAGGTTGCAGGGTTTTAAATTGGGCCTTGATGCTAATAAAGTAAGTTGGTTACTCCTTGGATCCCTCAGGATCTTTCTCCATGAGGTCTCTTTTACTTAATCTGATTGCCTCAAGACACCTATTCTTAAGTGTATTCTTGTAAATCAGATTTATGAGTAAGGTTCCTAAGAACCTGCCATTTTCATTTTCGTTCTTGCTTTCATTTTCAAGCATTCTTTGTAGTTTGAGAATAGTCTCTTTTTATTTCCATCCATGACGAGTGTTGTTTTTGTTAACAAAAGAAAGGAATGTTCCTAAGAAGGTGAAGATCTTCTTATACTCCAGGCCACAGGAGCCTAGCTACCTAAGAGAGGATTCAAAGTGAAGCTCCATTACTCTTAGCCCCGCTACTTGTGTGCTCTGTCTGCACTGTGACGAATTGGATCACATTCTGTTGCTTTGTTCCTTTGCAATAATTTGTTTGGCCAGGTTGATAAGCTTTTTTGAGATGCAACTTTGTCTTCCTAGAAAGGTGGATTTTTGGCTCTGCCGCTCTGGGAGTCTCTTAGAGGATGCAATTTGAAGAACAAAGCTAGAATCTTGTGGTAGTTTGCTTCGAGAGATCCTTGGAACTTGTGGCTGGAACGGTCTAGTTCTTTTGGGATTCCTAAAACTCACTGCATCTTGGTGCTGCCATTGTTTTAGCAAAATCTTTACTTTTCCTATGATTCTATGGAAGACTGTTTGTATGGGTAGTGGGGGCTTTCTTATCTCCGGCTCTTAGGTTGTTGACCTGTTGCTCTTTTATGGTTTGAAGAATTCTCCTCTATGGTAAGGTGATGGGGAGAAACCTCAAATTGCAAAGCTAGCAAATTTTATGTTTATTCCTAGTATAAACACTTCATTTTTTCAAGTCTATGCTCCAACACTCACCCGACATGTGAAGAAAGTCTTACTGCTTTGATAATTTTTAACTTCTAGACACACTTTGAAAAAACAAAGTTAAACATTTGCTAGATTTGAAAGTGCACTACCCAATACCCACTACCCAATACCCACTAGAAAGCAATTGCACTTGTACTCCCCTCAAAGGAGTCCTTTTGGATATTTCGTTCATTGATGAAATTGTTTCTTGACTAAATTGTTTCTATTTTCAACTTTGTTTTGTCAACCTTATTGAAACTCAATTGTTTTTCGCTCCAATAGAGAAGCAAAAGATAGCCTCAATACTTATAAAAGTGAGGGAATCTCCTATGCCCTAAGGGTAGGGGGACTTCCTCTCACAAATGAAGTCATTTCTAGCATCCCATTCGTCATCTCTTTACTTTTTAATGCCTTAGAAAGTGCTAAAGAGCTTGGAAAGATTTATTTGTAATGTCTTTTGGGGAGGAGTATGTTAGGATACTTCCTAAAAAGAATCAAGATCTAAAATATATTGAGAATTAAAGAAGAAACTACAATATAATCCAAGTATAAAGGAACTCAGGACTTCCCTCTTGATAGCCCTCACCCAAGCCCTAGATCGCTCCACAAAATACCTCACTAATCCTCTTTCTATTTATACAACATCCAGTAAGAGTAACTAACTTTCCATCTAATGACCAATAGATTCCTTAATACTAACATACTAATTTTCATATCTCAGTACCTAATACTAAATTGGAAGACATATCCCCCCTCCTCGCCACCACGTAGGTCCTTGGAAATCCATCTCCAAGGCTTGCTCTGTAGCTGAAAAATGGTCTAAAAACTTGGAAAGGACAGTAAAATTTGGTTTTGGGAGGTTATGTGGATTGTTCATTGGCCCTTAGATGTTCCTTACCAAGAATTTACAGTAGTATTTCTTGCATAGACAACTTTATTTATCAATGTTGGTCTGCATCCTCAAATAGTTGGGTTAGCCTTTAGGATTTTGATTGTCGATTAAACTCGAGAGTGGATCGAGCTCTACAGCCTCGTGTAGTCAAAATGTCCTTTGAATATTGAAGATTCTAAGTTTTGGAGCCTCAAAAGATATGGTCGATTTTTTTGTTAGTTCCTTACTTACTCAGTTAGCTCATCACCCATTAGGTCCCCGACGATATTAATACCTCAAAGGAAATTTGGGTGGCCATAGTCCCAAAGAAAGTGGAAGCCTTTCAATAGGTCTTCATTCAAGGCAAGTTAAACACAAAGGATGTTCTACAAAGAAGATAAACAAATTCTCACATGCTCCAAATTGGTGCATTATCTGCAGGATTGAATAAAGAAAGTCAGCACAATTATTCTTCCTTTGCTCTTGGGCAAACTCCTTGGACGAGATTATCGAGTTTTTTGGGGTTTGCTGGTGTTAGCTAAAAGAAATGATGGGGCTCTTTTTCTTCTATTTTTGGAACTTTTGTGAAAATTGTGGTAAGGTTTGGGGACTAGAAGTTCTACAATGAGAAGACAACTAGCCTTGACATGCTTTGGACTCTTATCAAACTCTTTGCATCCATCTGGTGTTGTCTAAGTCTTTTTTGTAATTATGGTTGTTTGTTGGTCTTTTTTTGTGACCCTTTGGCCTGACAAGGATAATTCATCTACACTTTTGTCATCAATATATTCTGTCTCTTATTAGAAAATAGAACAAAGGACGTAAAAAGACACCCTCATTGGACAATGAATATTATTGATTGTTCATCACTGTTTTAATTTATTTAATTTGTTTTGATGTTGAAATTTAGATATTATAGTTACTTTTACATTATTAAGAATTTTGAATGTTTGCGCCCACATGATCGCATGTGCACACAGATAACATTTTTTGAAGGGAAAAAAACCATATCCCCAATGTTTAATACCCAACTGTTTTATTAATTCATATTACTGTGTTAGTGTCGTACTTTATCGATGGCACATTTCACATTTCTTATATTTTTCCACTGATTTTGATGGATTTCCTTTCCCTTTTGGCTTTGTAAAAATCATGACTACTGTAGACTGTAGAGTATGAATTGAATTGAAGCCTTGAATGGTATCATGTTACAGTTTCCTTAACTTTTGAGCTTTGTATCTATTGCTATCATCTTTAGCTGGAAGTATCTCTTAAGAAAAATGTCAATTGTTGTTTGCAGATGATTACCGCCTATTTTGTGGTGATCTTGGCAATGAAGTGAATGATGACGTGCTCTCTAAAGCATTCTCACGATTTCCTTCATTTAACATGGCAAGGGTAAGTTTATTTAGTCTAATATTATTCTACATAGCTCACCTTTTATTTTCAATTTTTGTTTTTGGCACTATGCATGGCGGTTAGTTTTCTTGAAATCTTCTGGACTGTTTAAAAGGTGGTAATGCATCTGGGTACATCTTGTTTGTTCGTTTACATGGGATTATGATTGCATTTGAAGATTCTGATTGGCGGTATCTGTTCCTTGAATCTCAATTTTTTTTTGATATTTTTTCAGGTTTATTTAAGTTCTATTTTGGTCGAAAAAACTTTTATACTATTTTGTTTGGGTTCTAAACTCTTAATTATTCTGCTTTGGTCTTTAAGCTTTTGATTTCATCCCCTGAACTATGCTATTAATCAATTCTTTTTGTTAATCACTTGGAATTTGCTAACCTGATCTGTGCTACTCAAATTACTTATCTACGTCGACACTCAACAGATAAAGGAACAAAAGCTGTGTCATATCATGTTTCTGCTAAATGATCTATAAAAATTAAAGGAAAATTAATGACAGTGACAAAATATTCTTTTATGCAAACCTGAAGGACGAAAATAGAATTATCTGGAAAACTAAAATGAAAAAATTACTATAGCTCCAAAGCAAAATAGGCTTACCTGTTTTTCATGTTTCTTAAATATTATTTGTGAGGTTATTAATTTTATTTAAGAAAGAAGTGATCATCTGCTTGGGACTTGTGCAGCTGGAACCTCTTTATGAAGCTTGAATGTAAACCCTTAGAATTTATTGAGTTCATGGACAGGCTTGAGTTATAACATGGTTGGGTTATTTAAGCTTGTCAGAGAAAGGTTAGCTCTGAAGCTTTTAAAAGTGGGTCTTCTTTTCCTTGGTCATTCTGACTATCTTATTACTTGTGGTGATAAGGGGAAAATCCCTGAAAAGTTTGGGCGTGAAACTATCCATGAAATTTTTAATAGCGACATGAAGACTGAGCTCTCTGCTTTTAGTAATTTTTCTTTTGGTATTCAGTCATGAATCTTGAAGATAGGAGCTATTGTAGTGATTGGTTCTGCGATTTCCCCATGTAGGTGCATATATTCGTGTTTTCTGGTCATTGTGCATTCGTGCGGTTAAATACATTCACTCACATCTCATGTCTGGTATTTGGTCCTATCACAGAAGGTTTATTTGATTTGTATTATTGTATGGATGAACCTAACTTAATTCTCACAAACATTTTTATCTTTTGGACCATGGTCAATTTCAAAGGCACTGCCCAATTATTAAAAAGGACTCCTATATCGGACATTTTGGAAGTGGTTTTGACCATATCTTTTATATATGTGAGTGTCTGGACCAACTGACCCGCATCTCGACTAATCTCACGAAACAATTTGTCTAACTCTACAACATTTAGGTGTCAAAGAAACTTGTAGGAAAGTGGTTTTGACCAATTGATGCGTCTTTTATAAGAAACAATTTGAACCTCGGTATCTTGGCAAATATATACTATTTTATGACTTTGCAGATAAACCTAAATTATTTTGGTATTTTATTAATGGTTTATGTTTATTGATTACATTGTTCTTTGGGGAATATTTTCTATTTACCAATGGATTAACATGCATATAATTTTGTTAAGGTTGTTAGAGATAAGCGAACTGGTAAAACCAAGGGCTATGGATTTGTTAGCTTCTCCAATCCTACTGACCTTGCTGGAGCACTTAAAGAAATGAATGGTAATATGCTGATTTTAGTTCTATATGGATTCATCAGTTATTTCATCTCATCTCTCTGTTGGATTCGTGCTTCTTGTTCAATTCTCATGACATGTACTGTGTAACCCTACTTACCTTGTGCAAGATCTTGTTAGAAGATTTTGCATGGAATAAAACCTTGTTTCTGGAGTTGGTTAAGTAACAAGTGTTTGTTTTTCTTCATTTTGCAGTTTTCTTTCTGTCAGAAAAATTTTAAAGACAAATTTAGATTTTAAATTGTAGATTTGATTTTTTGTTTTTTGTTTTTTGTTTTTGGTTGGAAATCTAAATGTCTTTTTAAAAGGGACAGTATGAATTACTTTCTAAAAGAACTAACAAAATAAAAGACAGTCTTGGAACTCGCATGGATGAATCTCATGGTCAAATCCTCGAGCGTGTGCCATCTAGGCTGTGGTAGCTAGAGTTTAGAAAGATGTGGAGTTTGCCATTTTTCAATGTCTTGTGTTTTCCTACAAATTCTCTGAAACTATTCTTTACATTCATTCCTTTCTTTAATCCTTGAAGCCTTTTCTTATTTCCTTTTACTTATTTTTGTTATAGTTTGTGCTTAGACCCTTTCTTGATCACAGGCAAGTACGTCGGAAATAGGCCGATAAAACTAAGAAAGAGCAATTGGAAGGAGAGGACAGACTACGAAGCACTTGGACGACACAAGGTAAAATAACGTTCTATGGGGGTTCTTTTGCACCCATACTTCTTGCTTTCTTTCAATGCTTGATCTTTTGATTTGGATGCGTTTTCTAATCAACTAATTTAATTACAGAATCACACACAAAAGAAATCAAAGCTTCCAAAGAAGAGTATCTTGCACAAGTAAAGGTCACTCACATCCTTGTATCTCTTTATATGCGTTGAATATAATCATCGATCAAGTGATCGTACAGTATGTCTAACCAGTGATCACAAATTTCATGAAGTTAGTAACTGATGGAGCCTTTCTGTTCTCTGTCCCAACTCTTTCGAAATTGAAGTGATTGTACGTTAGAGAGGAGAATGTTTACTTTGAAGGAATAGATCTTGTAAAGTGTTATGCATTCTTCATTTTCTTCGGGAATTTAACGAAGGAATGGAAGATTAGTTATGTTTGAAAAATCATAGTTAAACACAACTGGTTGGACATTACTCTTGTAATGGGAAGTGGCCGGGTTCAAATCTCAAGTCATGTGAGAGTGAAACAATATATCTATTCTTGACCATT

mRNA sequence

CCCTTTTCCGAAAAATGCCCCTTTTTTTTCCTTTGTAAAATAAGAAGTTGGGTAACCTGAATCCAAAAGTTCTCAAACTTGTTTTAATTTGTAAATTTTTTTGTAGTGCGCTACCCGGCAAAGCTCGCGATTCCCAGATTGTGAGAATCGGAGCATTTTCTTAATTGTCGTTGGCCATGGCGGGTCCTTCCTCGGCTCCTTCGTCAGCTTCTTCCTCTTCAGCTTCCCAATTTACGTATTCAAACGGTTCTTACTTTCCTTTACCTTTCCATCTCCAGCAGTCTGCTCCAGCACCTGCACCCCCCCAGTATTCTTCTCCCTATGTCGCTCCTCCAGGCCCTCCCCCAGTTCCCCTCCCCGTCGCACCTGTTTATCCTGCTCCTGCTCCGCCTCCGGCGGTCTATACTCTCCCTCAATACCAGCAGGCCCAACAATTGTTTCAAAGGGATGCTCAAACCATAACACCGGAAGCTCTTGAGAGTGTTAAAGCTGCTCTTGCAAGTAGTGAGATTGAGCATAAAGCAGAAACAAAAAAGAAAGCTATTCCTCGCAAAGCTGCCGGGCAATCTTGGGAGGATCCAACTCTTGCTGAGTGGCCTGAAAATGATTACCGCCTATTTTGTGGTGATCTTGGCAATGAAGTGAATGATGACGTGCTCTCTAAAGCATTCTCACGATTTCCTTCATTTAACATGGCAAGGGTTGTTAGAGATAAGCGAACTGGTAAAACCAAGGGCTATGGATTTGTTAGCTTCTCCAATCCTACTGACCTTGCTGGAGCACTTAAAGAAATGAATGGCAAGTACGTCGGAAATAGGCCGATAAAACTAAGAAAGAGCAATTGGAAGGAGAGGACAGACTACGAAGCACTTGGACGACACAAGAATCACACACAAAAGAAATCAAAGCTTCCAAAGAAGAGTATCTTGCACAAGTAAAGGTCACTCACATCCTTGTATCTCTTTATATGCGTTGAATATAATCATCGATCAAGTGATCGTACAGTATGTCTAACCAGTGATCACAAATTTCATGAAGTTAGTAACTGATGGAGCCTTTCTGTTCTCTGTCCCAACTCTTTCGAAATTGAAGTGATTGTACGTTAGAGAGGAGAATGTTTACTTTGAAGGAATAGATCTTGTAAAGTGTTATGCATTCTTCATTTTCTTCGGGAATTTAACGAAGGAATGGAAGATTAGTTATGTTTGAAAAATCATAGTTAAACACAACTGGTTGGACATTACTCTTGTAATGGGAAGTGGCCGGGTTCAAATCTCAAGTCATGTGAGAGTGAAACAATATATCTATTCTTGACCATT

Coding sequence (CDS)

ATGGCGGGTCCTTCCTCGGCTCCTTCGTCAGCTTCTTCCTCTTCAGCTTCCCAATTTACGTATTCAAACGGTTCTTACTTTCCTTTACCTTTCCATCTCCAGCAGTCTGCTCCAGCACCTGCACCCCCCCAGTATTCTTCTCCCTATGTCGCTCCTCCAGGCCCTCCCCCAGTTCCCCTCCCCGTCGCACCTGTTTATCCTGCTCCTGCTCCGCCTCCGGCGGTCTATACTCTCCCTCAATACCAGCAGGCCCAACAATTGTTTCAAAGGGATGCTCAAACCATAACACCGGAAGCTCTTGAGAGTGTTAAAGCTGCTCTTGCAAGTAGTGAGATTGAGCATAAAGCAGAAACAAAAAAGAAAGCTATTCCTCGCAAAGCTGCCGGGCAATCTTGGGAGGATCCAACTCTTGCTGAGTGGCCTGAAAATGATTACCGCCTATTTTGTGGTGATCTTGGCAATGAAGTGAATGATGACGTGCTCTCTAAAGCATTCTCACGATTTCCTTCATTTAACATGGCAAGGGTTGTTAGAGATAAGCGAACTGGTAAAACCAAGGGCTATGGATTTGTTAGCTTCTCCAATCCTACTGACCTTGCTGGAGCACTTAAAGAAATGAATGGCAAGTACGTCGGAAATAGGCCGATAAAACTAAGAAAGAGCAATTGGAAGGAGAGGACAGACTACGAAGCACTTGGACGACACAAGAATCACACACAAAAGAAATCAAAGCTTCCAAAGAAGAGTATCTTGCACAAGTAA

Protein sequence

MAGPSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYSSPYVAPPGPPPVPLPVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEALESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLAGALKEMNGKYVGNRPIKLRKSNWKERTDYEALGRHKNHTQKKSKLPKKSILHK*

Homology

[Close]

BLAST of Cucsa.178480 vs. Swiss-Prot
Match: RBM42_XENTR (RNA-binding protein 42 OS=Xenopus tropicalis GN=rbm42 PE=2 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 3.2e-45
Identity = 105/228 (46.05%), Postives = 131/228 (57.46%), Query Frame = 1


Query: 30  PFHLQQSAPAPAPPQYSSPYVAPPGP-PPVPLPVAP----VYPAPAPP-PAVYTLPQYQQ 89
           P  L +  P P     + P  AP GP PP P PV P    + P      P VYT P  ++
Sbjct: 153 PPPLMRHIPPPPLGMRAGPPPAPVGPLPPPPRPVVPSAPKMNPTVIQAAPTVYTAPPVRK 212

Query: 90  AQQLFQRDAQTITPEALESVKAALASSE------------------IEHKAETKKKAIPR 149
            ++      + + P  L   K  L+  E                  +E   E KKK  P 
Sbjct: 213 PEE------EIVEPPILPDEKETLSFEEAVIGPSMPEMEPVQPEVVLEPVQEDKKKTKPE 272

Query: 150 K-------AAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVR 209
           K       AAG SWED +L EW  +D+R+FCGDLGNEVNDD+L++AFSR+PSF  A+V+R
Sbjct: 273 KLKRCIRTAAGTSWEDQSLLEWESDDFRIFCGDLGNEVNDDILARAFSRYPSFLRAKVIR 332

Query: 210 DKRTGKTKGYGFVSFSNPTDLAGALKEMNGKYVGNRPIKLRKSNWKER 227
           DKRTGKTKGYGFVSF +P D   A++EMNGKYVG+RPIKLRKS WK+R
Sbjct: 333 DKRTGKTKGYGFVSFKDPNDYVRAMREMNGKYVGSRPIKLRKSQWKDR 374

[Close]

BLAST of Cucsa.178480 vs. Swiss-Prot
Match: RBM42_BOVIN (RNA-binding protein 42 OS=Bos taurus GN=RBM42 PE=2 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 7.9e-44
Identity = 97/193 (50.26%), Postives = 124/193 (64.25%), Query Frame = 1


Query: 36  SAPAPAPPQYSSPYVAP-PGPPPVPLPVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQT 95
           + PA   P        P P P P+PLP+  V     PP  +  L   +       R  + 
Sbjct: 243 AGPAVIGPSLPLALAMPLPEPEPLPLPLE-VVRGLLPPLRIPELLSLRPRP----RPPRP 302

Query: 96  ITPEALESVKAALASSEIEHKAETKK-KAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLG 155
             P  L +++     SE + K + +K K   R AAG SWEDP+L EW  +D+R+FCGDLG
Sbjct: 303 EPPPGLMALEVPEPLSEDKKKGKPEKLKRCIRTAAGSSWEDPSLLEWDADDFRIFCGDLG 362

Query: 156 NEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLAGALKEMNGKYVGN 215
           NEVNDD+L++AFSRFPSF  A+V+RDKRTGKTKGYGFVSF +P+D   A++EMNGKYVG+
Sbjct: 363 NEVNDDILARAFSRFPSFLKAKVIRDKRTGKTKGYGFVSFKDPSDYVRAMREMNGKYVGS 422

Query: 216 RPIKLRKSNWKER 227
           RPIKLRKS WK+R
Sbjct: 423 RPIKLRKSMWKDR 430

[Close]

BLAST of Cucsa.178480 vs. Swiss-Prot
Match: RBM42_XENLA (RNA-binding protein 42 OS=Xenopus laevis GN=rbm42 PE=2 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.0e-43
Identity = 100/222 (45.05%), Postives = 128/222 (57.66%), Query Frame = 1


Query: 30  PFHLQQSAPAPAPPQYSSPYVAPPGP-PPVPLPV----APVYPAPAPP-PAVYTLPQYQQ 89
           P  L +  P P       P  AP GP PP P P+      + P      P VYT P  ++
Sbjct: 153 PPPLMRHIPPPPLGMRPGPPPAPMGPLPPPPRPMVQSAPKINPTVIQAAPTVYTAPPVRK 212

Query: 90  AQQLFQRDA------------QTITPEALESVKAALASSEIEHKAETKKKAIPRK----- 149
            ++                  +T+   ++  ++       +E   E KKKA P K     
Sbjct: 213 PEEEIVEPPIIPEEKESLSYEETVIGPSMPEIEPVQPEVVLEPVQEDKKKAKPEKLKRCI 272

Query: 150 --AAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGK 209
             AAG SWED +L EW  +D+R+FCGDLGNEVNDD+L++AFSR+PSF  A+V+RDKRTGK
Sbjct: 273 RTAAGTSWEDQSLLEWEPDDFRIFCGDLGNEVNDDILARAFSRYPSFLRAKVIRDKRTGK 332

Query: 210 TKGYGFVSFSNPTDLAGALKEMNGKYVGNRPIKLRKSNWKER 227
           TKGYGFVSF +P D   A +EMNGKYVG+RPIKLRKS WK+R
Sbjct: 333 TKGYGFVSFKDPNDYVRATREMNGKYVGSRPIKLRKSQWKDR 374

[Close]

BLAST of Cucsa.178480 vs. Swiss-Prot
Match: RBM42_MOUSE (RNA-binding protein 42 OS=Mus musculus GN=Rbm42 PE=1 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 2.3e-43
Identity = 96/193 (49.74%), Postives = 123/193 (63.73%), Query Frame = 1


Query: 36  SAPAPAPPQYSSPYVAP-PGPPPVPLPVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQT 95
           + PA   P        P P P P+PLP+  V     PP  +  L   +       R  + 
Sbjct: 269 AGPAVIGPSLPLALAMPLPEPEPLPLPLE-VVRGLLPPLRIPELLSLRPRP----RPPRP 328

Query: 96  ITPEALESVKAALASSEIEHKAETKK-KAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLG 155
             P  L +++      E + K + +K K   R AAG SWEDP+L EW  +D+R+FCGDLG
Sbjct: 329 EPPPGLMALEVPEPLGEDKKKGKPEKLKRCIRTAAGSSWEDPSLLEWDADDFRIFCGDLG 388

Query: 156 NEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLAGALKEMNGKYVGN 215
           NEVNDD+L++AFSRFPSF  A+V+RDKRTGKTKGYGFVSF +P+D   A++EMNGKYVG+
Sbjct: 389 NEVNDDILARAFSRFPSFLKAKVIRDKRTGKTKGYGFVSFKDPSDYVRAMREMNGKYVGS 448

Query: 216 RPIKLRKSNWKER 227
           RPIKLRKS WK+R
Sbjct: 449 RPIKLRKSMWKDR 456

[Close]

BLAST of Cucsa.178480 vs. Swiss-Prot
Match: RBM42_RAT (RNA-binding protein 42 OS=Rattus norvegicus GN=Rbm42 PE=1 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 2.3e-43
Identity = 96/193 (49.74%), Postives = 123/193 (63.73%), Query Frame = 1


Query: 36  SAPAPAPPQYSSPYVAP-PGPPPVPLPVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQT 95
           + PA   P        P P P P+PLP+  V     PP  +  L   +       R  + 
Sbjct: 269 AGPAVIGPSLPLALAMPLPEPEPLPLPLE-VVRGLLPPLRIPELLSLRPRP----RPPRP 328

Query: 96  ITPEALESVKAALASSEIEHKAETKK-KAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLG 155
             P  L +++      E + K + +K K   R AAG SWEDP+L EW  +D+R+FCGDLG
Sbjct: 329 EPPPGLMALEVPEPLGEDKKKGKPEKLKRCIRTAAGSSWEDPSLLEWDADDFRIFCGDLG 388

Query: 156 NEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLAGALKEMNGKYVGN 215
           NEVNDD+L++AFSRFPSF  A+V+RDKRTGKTKGYGFVSF +P+D   A++EMNGKYVG+
Sbjct: 389 NEVNDDILARAFSRFPSFLKAKVIRDKRTGKTKGYGFVSFKDPSDYVRAMREMNGKYVGS 448

Query: 216 RPIKLRKSNWKER 227
           RPIKLRKS WK+R
Sbjct: 449 RPIKLRKSMWKDR 456

[Close]

BLAST of Cucsa.178480 vs. TrEMBL
Match: A0A0A0LH39_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G075290 PE=4 SV=1)

HSP 1 Score: 520.8 bits (1340), Expect = 9.5e-145
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 1


Query: 1   MAGPSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYSSPYVAPPGPPPVPL 60
           MAGPSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYSSPYVAPPGPPPVPL
Sbjct: 1   MAGPSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYSSPYVAPPGPPPVPL 60

Query: 61  PVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEALESVKAALASSEIEHKAETKK 120
           PVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEALESVKAALASSEIEHKAETKK
Sbjct: 61  PVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEALESVKAALASSEIEHKAETKK 120

Query: 121 KAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDK 180
           KAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDK
Sbjct: 121 KAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDK 180

Query: 181 RTGKTKGYGFVSFSNPTDLAGALKEMNGKYVGNRPIKLRKSNWKERTDYEALGRHKNHTQ 240
           RTGKTKGYGFVSFSNPTDLAGALKEMNGKYVGNRPIKLRKSNWKERTDYEALGRHKNHTQ
Sbjct: 181 RTGKTKGYGFVSFSNPTDLAGALKEMNGKYVGNRPIKLRKSNWKERTDYEALGRHKNHTQ 240

Query: 241 KKSKLPKKSILHK 254
           KKSKLPKKSILHK
Sbjct: 241 KKSKLPKKSILHK 253

[Close]

BLAST of Cucsa.178480 vs. TrEMBL
Match: F6H614_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0036g00630 PE=4 SV=1)

HSP 1 Score: 429.9 bits (1104), Expect = 2.2e-117
Identity = 214/256 (83.59%), Postives = 227/256 (88.67%), Query Frame = 1


Query: 5   SSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYSSPYVAPPGPP------PV 64
           +S  +S+S+SS+SQFTYSN SYFPLPFHLQQS P  A  QY  PYVAPP PP      PV
Sbjct: 2   ASTSASSSTSSSSQFTYSNASYFPLPFHLQQSDPMAAVSQYPKPYVAPPPPPVQVPVPPV 61

Query: 65  PLP-VAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEALESVKAALASSEIEHKAE 124
            +P VAPVYPAPAP   VY+LPQYQQAQQLFQRDAQTITPEALESVKAALASSEIEHKAE
Sbjct: 62  KIPAVAPVYPAPAPVAGVYSLPQYQQAQQLFQRDAQTITPEALESVKAALASSEIEHKAE 121

Query: 125 TKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVV 184
           TKKKAIPRKAAGQ+WEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMA+VV
Sbjct: 122 TKKKAIPRKAAGQTWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVV 181

Query: 185 RDKRTGKTKGYGFVSFSNPTDLAGALKEMNGKYVGNRPIKLRKSNWKERTDYEALGRHKN 244
           RDKRTGKT+GYGFVSFSNP DLA ALKEMNGKYVGNRPIKLRKSNW+ERTD+EAL R KN
Sbjct: 182 RDKRTGKTRGYGFVSFSNPLDLAAALKEMNGKYVGNRPIKLRKSNWRERTDFEALERQKN 241

Query: 245 HTQKKSKLPKKSILHK 254
           H QKK KL KKS+LHK
Sbjct: 242 HIQKKPKLSKKSVLHK 257

[Close]

BLAST of Cucsa.178480 vs. TrEMBL
Match: F6HBY9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0018g01710 PE=4 SV=1)

HSP 1 Score: 416.8 bits (1070), Expect = 1.9e-113
Identity = 212/257 (82.49%), Postives = 224/257 (87.16%), Query Frame = 1


Query: 5   SSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYSSPYVAPPGPPPVPLPV-- 64
           S++ SS+SSSS+SQFTYSN SYFPLPFHLQQS P  A  QY  PYVAP  PPPV +PV  
Sbjct: 3   STSASSSSSSSSSQFTYSNASYFPLPFHLQQSGPM-AVSQYPQPYVAP-SPPPVHVPVPP 62

Query: 65  ------APVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEALESVKAALASSEIEHKA 124
                 APVYPA AP   VY+LPQYQQA QLFQRDAQTITPEALESVKAALASSEIEHKA
Sbjct: 63  VKISTIAPVYPASAPGAGVYSLPQYQQAHQLFQRDAQTITPEALESVKAALASSEIEHKA 122

Query: 125 ETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARV 184
           ETKK+AIPRK AGQ+WEDPTLA+WPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARV
Sbjct: 123 ETKKRAIPRKVAGQTWEDPTLADWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARV 182

Query: 185 VRDKRTGKTKGYGFVSFSNPTDLAGALKEMNGKYVGNRPIKLRKSNWKERTDYEALGRHK 244
           VRDKRTGKT+G+GFVSFSNP+DLA ALKEMNGKYVGNRPIKLRKSNWKERTD EAL R K
Sbjct: 183 VRDKRTGKTRGFGFVSFSNPSDLAAALKEMNGKYVGNRPIKLRKSNWKERTDSEALERQK 242

Query: 245 NHTQKKSKLPKKSILHK 254
           NH QKK KL KKSILHK
Sbjct: 243 NHIQKKPKLSKKSILHK 257

[Close]

BLAST of Cucsa.178480 vs. TrEMBL
Match: A5B7R7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_033169 PE=4 SV=1)

HSP 1 Score: 415.6 bits (1067), Expect = 4.3e-113
Identity = 211/257 (82.10%), Postives = 224/257 (87.16%), Query Frame = 1


Query: 5   SSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYSSPYVAPPGPPPVPLPV-- 64
           S++ SS+SSSS+SQFTYSN SYFPLPFHLQQS P  A  QY  PYVAP  PPPV +PV  
Sbjct: 3   STSASSSSSSSSSQFTYSNASYFPLPFHLQQSGPM-AVSQYPQPYVAP-SPPPVHVPVPP 62

Query: 65  ------APVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEALESVKAALASSEIEHKA 124
                 APVYPA AP   VY+LPQYQQA QLFQRDAQTITPEALESVKAALASSEIEHKA
Sbjct: 63  VKISTIAPVYPASAPGAGVYSLPQYQQAHQLFQRDAQTITPEALESVKAALASSEIEHKA 122

Query: 125 ETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARV 184
           ETKK+AIPRK AGQ+WEDPTLA+WPENDYRLFCGDLGNEVNDDVLSK+FSRFPSFNMARV
Sbjct: 123 ETKKRAIPRKVAGQTWEDPTLADWPENDYRLFCGDLGNEVNDDVLSKSFSRFPSFNMARV 182

Query: 185 VRDKRTGKTKGYGFVSFSNPTDLAGALKEMNGKYVGNRPIKLRKSNWKERTDYEALGRHK 244
           VRDKRTGKT+G+GFVSFSNP+DLA ALKEMNGKYVGNRPIKLRKSNWKERTD EAL R K
Sbjct: 183 VRDKRTGKTRGFGFVSFSNPSDLAAALKEMNGKYVGNRPIKLRKSNWKERTDSEALERQK 242

Query: 245 NHTQKKSKLPKKSILHK 254
           NH QKK KL KKSILHK
Sbjct: 243 NHIQKKPKLSKKSILHK 257

[Close]

BLAST of Cucsa.178480 vs. TrEMBL
Match: A0A067JW37_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23547 PE=4 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 1.1e-108
Identity = 207/255 (81.18%), Postives = 215/255 (84.31%), Query Frame = 1


Query: 5   SSAPSSASSSSASQFTYS------NGSYFPLPFHLQQSAPAPAPPQYSSPYVAPPGPPPV 64
           S  PSS S+SSASQFTY+      NGSYFP+PFHLQQS            Y APP   P 
Sbjct: 2   SIPPSSTSASSASQFTYTTTTPTANGSYFPMPFHLQQSVQT---------YAAPPAVLPA 61

Query: 65  PLPVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEALESVKAALASSEIEHKAET 124
              VAPVYPAP  P  VY+LPQYQQAQQLFQRDAQTITPEALESVKAALASSEIEHK ET
Sbjct: 62  ---VAPVYPAPVGP--VYSLPQYQQAQQLFQRDAQTITPEALESVKAALASSEIEHKQET 121

Query: 125 KKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVR 184
           KKKA+PRKAAGQ+WEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVR
Sbjct: 122 KKKAVPRKAAGQTWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVR 181

Query: 185 DKRTGKTKGYGFVSFSNPTDLAGALKEMNGKYVGNRPIKLRKSNWKERTDYEALGRHKNH 244
           DKRTGKTKGYGFVSFSNPTDLA ALKEMNGKYVGNRPIKLRKSNW+ERTD+EAL R KNH
Sbjct: 182 DKRTGKTKGYGFVSFSNPTDLAAALKEMNGKYVGNRPIKLRKSNWRERTDFEALERQKNH 241

Query: 245 TQKKSKLPKKSILHK 254
             KK KLPKKSILHK
Sbjct: 242 NLKKPKLPKKSILHK 242

[Close]

BLAST of Cucsa.178480 vs. TAIR10
Match: AT3G04500.1 (AT3G04500.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 362.1 bits (928), Expect = 2.9e-100
Identity = 187/255 (73.33%), Postives = 204/255 (80.00%), Query Frame = 1


Query: 4   PSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYSSPYVAPPGP----PPVP 63
           PSS   S+SSSS+SQ+TY+  SY+  P+          PPQ   PY A P P    P   
Sbjct: 5   PSSG--SSSSSSSSQYTYAANSYYSAPYQ---------PPQ---PYAAAPSPAVPAPVAS 64

Query: 64  LPVAPVYPAPAPP-PAVYTLPQYQQAQQLFQRDAQTITPEALESVKAALASSEIEHKAET 123
           +P A VYP P  P PAVY  PQYQQA QLFQRDAQTITPEALE+VKAALASSE EHKAET
Sbjct: 65  IPGATVYPQPVGPVPAVYAYPQYQQAHQLFQRDAQTITPEALENVKAALASSETEHKAET 124

Query: 124 KKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVR 183
           KK+AIPRKAAGQSWEDPTL+EWPENDYRLFCGDLGNEVNDDVLSKAF+RFP+FNMA+V+R
Sbjct: 125 KKRAIPRKAAGQSWEDPTLSEWPENDYRLFCGDLGNEVNDDVLSKAFARFPTFNMAKVIR 184

Query: 184 DKRTGKTKGYGFVSFSNPTDLAGALKEMNGKYVGNRPIKLRKSNWKERTDYEALGRHKNH 243
           DKRTGKTKGYGFVSF NP DLA ALKEMNGKYVGNRPIKLRKS+WKERTD EA  R K+H
Sbjct: 185 DKRTGKTKGYGFVSFLNPADLAAALKEMNGKYVGNRPIKLRKSSWKERTDQEAAERQKHH 244

Query: 244 TQKKSKLPKKSILHK 254
           + KK K  KKSILHK
Sbjct: 245 SNKKQKTVKKSILHK 245

[Close]

BLAST of Cucsa.178480 vs. TAIR10
Match: AT3G14100.1 (AT3G14100.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 79.0 bits (193), Expect = 4.8e-15
Identity = 63/204 (30.88%), Postives = 98/204 (48.04%), Query Frame = 1


Query: 33  LQQSAPAPAPPQYSSPYVAPPGPPPVPLPVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDA 92
           +QQ A       Y    +APP   PVP    P    P+   +VY    + Q  +   ++ 
Sbjct: 19  MQQQALMQQHSLYHPGVLAPPQLEPVPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEI 78

Query: 93  QTITP--EALESVKAALASSEIEHKAETKKKAIP------RKAAGQ----SWEDPT-LAE 152
            T T   E+ + ++   +S    H  + +  A+       R   GQ    +W   T   E
Sbjct: 79  FTSTGPVESSKLIRKDKSSYGFVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYATGQRE 138

Query: 153 WPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDL 212
              + + +F GDL  EV D  L ++FS F S + ARV+ D++TG+++G+GFVSF N  D 
Sbjct: 139 DTSSHFNIFVGDLSPEVTDATLYQSFSVFSSCSDARVMWDQKTGRSRGFGFVSFRNQQDA 198

Query: 213 AGALKEMNGKYVGNRPIKLRKSNW 224
             A+ EMNGK++ +R I   + NW
Sbjct: 199 QTAINEMNGKWLSSRQI---RCNW 219

[Close]

BLAST of Cucsa.178480 vs. TAIR10
Match: AT1G54080.2 (AT1G54080.2 oligouridylate-binding protein 1A)

HSP 1 Score: 77.8 bits (190), Expect = 1.1e-14
Identity = 65/228 (28.51%), Postives = 101/228 (44.30%), Query Frame = 1


Query: 33  LQQSAPAPAPPQYSSPYVAPPGPPPVPLPVAPVYPAPAPPPAVYTLPQYQQAQQLFQRD- 92
           +QQ+     P  Y    +APP   P+P    P    P    +VY    + Q  ++  ++ 
Sbjct: 23  IQQAMMQQHPSLYHPGVMAPPQMEPLPSGNLPPGFDPTTCRSVYAGNIHTQVTEILLQEI 82

Query: 93  -AQTITPEALESVKAALASSEIEHKAETK--KKAIPRKAAGQSWEDPTLAEWP------- 152
            A T   E+ + ++   +S    H  + +    AI        +  P    W        
Sbjct: 83  FASTGPIESCKLIRKDKSSYGFVHYFDRRCASMAIMTLNGRHIFGQPMKVNWAYATGQRE 142

Query: 153 --ENDYRLFCGDLGNEVNDDVLSKAFSRFPS----FNMARVVRDKRTGKTKGYGFVSFSN 212
              + + +F GDL  EV D  L  +FS F S    +  ARV+ D++TG+++G+GFVSF N
Sbjct: 143 DTSSHFNIFVGDLSPEVTDAALFDSFSAFNSCSSYYRDARVMWDQKTGRSRGFGFVSFRN 202

Query: 213 PTDLAGALKEMNGKYVGNRPIKLRKSNWKERTDYEALGRHKNHTQKKS 244
             D   A+ EMNGK+V +R I   + NW   T     G  K+ +  KS
Sbjct: 203 QQDAQTAINEMNGKWVSSRQI---RCNW--ATKGATFGEDKHSSDGKS 245

[Close]

BLAST of Cucsa.178480 vs. TAIR10
Match: AT1G17370.1 (AT1G17370.1 oligouridylate binding protein 1B)

HSP 1 Score: 73.2 bits (178), Expect = 2.6e-13
Identity = 61/224 (27.23%), Postives = 99/224 (44.20%), Query Frame = 1


Query: 33  LQQSAPAPAPPQYSSPYVAPPGPPPVPLPVAPVYPAPAPPPAVYTLPQYQQAQQLFQRD- 92
           + Q A       Y    +APP   P+P    P    P+   +VY    + Q  +   ++ 
Sbjct: 14  MMQQALMQQQSLYHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNIHIQVTEPLLQEV 73

Query: 93  -AQTITPEALESVKAALASSEIEHKAETKKK--AIPRKAAGQSWEDPTLAEWP------- 152
            A T   E+ + ++   +S    H  + +    AI        +  P    W        
Sbjct: 74  FAGTGPVESCKLIRKEKSSYGFVHYFDRRSAGLAILSLNGRHLFGQPIKVNWAYASGQRE 133

Query: 153 --ENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDL 212
              + + +F GDL  EV D +L   FS +P+ + ARV+ D++TG+++G+GFVSF N  D 
Sbjct: 134 DTSSHFNIFVGDLSPEVTDAMLFTCFSVYPTCSDARVMWDQKTGRSRGFGFVSFRNQQDA 193

Query: 213 AGALKEMNGKYVGNRPIKLRKSNWKERTDYEALGRHKNHTQKKS 244
             A+ E+ GK++G+R I   + NW   T     G  K  +  KS
Sbjct: 194 QTAIDEITGKWLGSRQI---RCNW--ATKGATSGEDKQSSDSKS 232

[Close]

BLAST of Cucsa.178480 vs. TAIR10
Match: AT3G19130.1 (AT3G19130.1 RNA-binding protein 47B)

HSP 1 Score: 70.1 bits (170), Expect = 2.2e-12
Identity = 35/76 (46.05%), Postives = 49/76 (64.47%), Query Frame = 1


Query: 144 DYRLFCGDLGNEVNDDVLSKAFS-RFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLAGA 203
           D  +F GDL  +V D +L + FS R+PS   A+VV D  TG++KGYGFV F +  + + A
Sbjct: 201 DLSVFVGDLSPDVTDVLLHETFSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRA 260

Query: 204 LKEMNGKYVGNRPIKL 219
           L EMNG Y  NR +++
Sbjct: 261 LTEMNGAYCSNRQMRV 276

HSP 2 Score: 40.4 bits (93), Expect = 1.9e-03
Identity = 23/77 (29.87%), Postives = 39/77 (50.65%), Query Frame = 1


Query: 147 LFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLAGALKEM 206
           L+ GDL + +++  L   FS     +  +V+R+K T +++GYGFV F +       L+  
Sbjct: 110 LWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRAAAEEVLQNY 169

Query: 207 NGKYVGNRPIKLRKSNW 224
           +G  + N     R  NW
Sbjct: 170 SGSVMPNSDQPFR-INW 185

[Close]

BLAST of Cucsa.178480 vs. NCBI nr
Match: gi|449470234|ref|XP_004152823.1| (PREDICTED: RNA-binding protein 42 [Cucumis sativus])

HSP 1 Score: 520.8 bits (1340), Expect = 1.4e-144
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 1


Query: 1   MAGPSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYSSPYVAPPGPPPVPL 60
           MAGPSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYSSPYVAPPGPPPVPL
Sbjct: 1   MAGPSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYSSPYVAPPGPPPVPL 60

Query: 61  PVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEALESVKAALASSEIEHKAETKK 120
           PVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEALESVKAALASSEIEHKAETKK
Sbjct: 61  PVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEALESVKAALASSEIEHKAETKK 120

Query: 121 KAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDK 180
           KAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDK
Sbjct: 121 KAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDK 180

Query: 181 RTGKTKGYGFVSFSNPTDLAGALKEMNGKYVGNRPIKLRKSNWKERTDYEALGRHKNHTQ 240
           RTGKTKGYGFVSFSNPTDLAGALKEMNGKYVGNRPIKLRKSNWKERTDYEALGRHKNHTQ
Sbjct: 181 RTGKTKGYGFVSFSNPTDLAGALKEMNGKYVGNRPIKLRKSNWKERTDYEALGRHKNHTQ 240

Query: 241 KKSKLPKKSILHK 254
           KKSKLPKKSILHK
Sbjct: 241 KKSKLPKKSILHK 253

[Close]

BLAST of Cucsa.178480 vs. NCBI nr
Match: gi|659082432|ref|XP_008441837.1| (PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 42 [Cucumis melo])

HSP 1 Score: 516.5 bits (1329), Expect = 2.6e-143
Identity = 251/253 (99.21%), Postives = 251/253 (99.21%), Query Frame = 1


Query: 1   MAGPSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYSSPYVAPPGPPPVPL 60
           MAGPSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPP Y SPYVAPPGPPPVPL
Sbjct: 1   MAGPSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPPYPSPYVAPPGPPPVPL 60

Query: 61  PVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEALESVKAALASSEIEHKAETKK 120
           PVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEALESVKAALASSEIEHKAETKK
Sbjct: 61  PVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEALESVKAALASSEIEHKAETKK 120

Query: 121 KAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDK 180
           KAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDK
Sbjct: 121 KAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDK 180

Query: 181 RTGKTKGYGFVSFSNPTDLAGALKEMNGKYVGNRPIKLRKSNWKERTDYEALGRHKNHTQ 240
           RTGKTKGYGFVSFSNPTDLAGALKEMNGKYVGNRPIKLRKSNWKERTDYEALGRHKNHTQ
Sbjct: 181 RTGKTKGYGFVSFSNPTDLAGALKEMNGKYVGNRPIKLRKSNWKERTDYEALGRHKNHTQ 240

Query: 241 KKSKLPKKSILHK 254
           KKSKLPKKSILHK
Sbjct: 241 KKSKLPKKSILHK 253

[Close]

BLAST of Cucsa.178480 vs. NCBI nr
Match: gi|359488053|ref|XP_002266454.2| (PREDICTED: RNA-binding protein 42-like isoform X1 [Vitis vinifera])

HSP 1 Score: 429.9 bits (1104), Expect = 3.2e-117
Identity = 214/256 (83.59%), Postives = 227/256 (88.67%), Query Frame = 1


Query: 5   SSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYSSPYVAPPGPP------PV 64
           +S  +S+S+SS+SQFTYSN SYFPLPFHLQQS P  A  QY  PYVAPP PP      PV
Sbjct: 2   ASTSASSSTSSSSQFTYSNASYFPLPFHLQQSDPMAAVSQYPKPYVAPPPPPVQVPVPPV 61

Query: 65  PLP-VAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEALESVKAALASSEIEHKAE 124
            +P VAPVYPAPAP   VY+LPQYQQAQQLFQRDAQTITPEALESVKAALASSEIEHKAE
Sbjct: 62  KIPAVAPVYPAPAPVAGVYSLPQYQQAQQLFQRDAQTITPEALESVKAALASSEIEHKAE 121

Query: 125 TKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVV 184
           TKKKAIPRKAAGQ+WEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMA+VV
Sbjct: 122 TKKKAIPRKAAGQTWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMAKVV 181

Query: 185 RDKRTGKTKGYGFVSFSNPTDLAGALKEMNGKYVGNRPIKLRKSNWKERTDYEALGRHKN 244
           RDKRTGKT+GYGFVSFSNP DLA ALKEMNGKYVGNRPIKLRKSNW+ERTD+EAL R KN
Sbjct: 182 RDKRTGKTRGYGFVSFSNPLDLAAALKEMNGKYVGNRPIKLRKSNWRERTDFEALERQKN 241

Query: 245 HTQKKSKLPKKSILHK 254
           H QKK KL KKS+LHK
Sbjct: 242 HIQKKPKLSKKSVLHK 257

[Close]

BLAST of Cucsa.178480 vs. NCBI nr
Match: gi|1009117912|ref|XP_015875574.1| (PREDICTED: RNA-binding protein 42 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 418.3 bits (1074), Expect = 9.5e-114
Identity = 212/259 (81.85%), Postives = 227/259 (87.64%), Query Frame = 1


Query: 1   MAGPSSAPSSASSSSASQFTYSNGS-YFPLPFHLQQSAPAPAPPQYSSPYVA-PPGPPPV 60
           MA P S+   +SS+S+SQFTYSNGS YFPLPFHLQQS   PA  QY +PY A PP   PV
Sbjct: 1   MATPPSSGPPSSSASSSQFTYSNGSSYFPLPFHLQQS---PAVSQYPAPYAAAPPSVQPV 60

Query: 61  PLP----VAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEALESVKAALASSEIEH 120
           P+P    VAP+YPA AP   VY+LPQYQQAQQLFQRDAQTITPEALESVKAALA+SEIEH
Sbjct: 61  PIPAPPVVAPIYPASAPVAGVYSLPQYQQAQQLFQRDAQTITPEALESVKAALANSEIEH 120

Query: 121 KAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMA 180
           KAE KKKA+PRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMA
Sbjct: 121 KAEAKKKAVPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMA 180

Query: 181 RVVRDKRTGKTKGYGFVSFSNPTDLAGALKEMNGKYVGNRPIKLRKSNWKERTDYEALGR 240
           RVVRDKRTGKTKGYGFVSF+NP+DLA ALKEMNGKYVGNRPIKLRKSNW+ERTD+EAL R
Sbjct: 181 RVVRDKRTGKTKGYGFVSFANPSDLAAALKEMNGKYVGNRPIKLRKSNWRERTDFEALER 240

Query: 241 HKNHTQKKSKLPKKSILHK 254
           HKN+T KK KL KKSI HK
Sbjct: 241 HKNNTHKKPKLSKKSIFHK 256

[Close]

BLAST of Cucsa.178480 vs. NCBI nr
Match: gi|225443254|ref|XP_002272469.1| (PREDICTED: RNA-binding protein 42 [Vitis vinifera])

HSP 1 Score: 416.8 bits (1070), Expect = 2.8e-113
Identity = 212/257 (82.49%), Postives = 224/257 (87.16%), Query Frame = 1


Query: 5   SSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYSSPYVAPPGPPPVPLPV-- 64
           S++ SS+SSSS+SQFTYSN SYFPLPFHLQQS P  A  QY  PYVAP  PPPV +PV  
Sbjct: 3   STSASSSSSSSSSQFTYSNASYFPLPFHLQQSGPM-AVSQYPQPYVAP-SPPPVHVPVPP 62

Query: 65  ------APVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEALESVKAALASSEIEHKA 124
                 APVYPA AP   VY+LPQYQQA QLFQRDAQTITPEALESVKAALASSEIEHKA
Sbjct: 63  VKISTIAPVYPASAPGAGVYSLPQYQQAHQLFQRDAQTITPEALESVKAALASSEIEHKA 122

Query: 125 ETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARV 184
           ETKK+AIPRK AGQ+WEDPTLA+WPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARV
Sbjct: 123 ETKKRAIPRKVAGQTWEDPTLADWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARV 182

Query: 185 VRDKRTGKTKGYGFVSFSNPTDLAGALKEMNGKYVGNRPIKLRKSNWKERTDYEALGRHK 244
           VRDKRTGKT+G+GFVSFSNP+DLA ALKEMNGKYVGNRPIKLRKSNWKERTD EAL R K
Sbjct: 183 VRDKRTGKTRGFGFVSFSNPSDLAAALKEMNGKYVGNRPIKLRKSNWKERTDSEALERQK 242

Query: 245 NHTQKKSKLPKKSILHK 254
           NH QKK KL KKSILHK
Sbjct: 243 NHIQKKPKLSKKSILHK 257

The following BLAST results are available for this feature:

BLAST of Cucsa.178480 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RBM42_XENTR	3.2e-45	46.05	RNA-binding protein 42 OS=Xenopus tropicalis GN=rbm42 PE=2 SV=1	[more]
RBM42_BOVIN	7.9e-44	50.26	RNA-binding protein 42 OS=Bos taurus GN=RBM42 PE=2 SV=1	[more]
RBM42_XENLA	1.0e-43	45.05	RNA-binding protein 42 OS=Xenopus laevis GN=rbm42 PE=2 SV=1	[more]
RBM42_MOUSE	2.3e-43	49.74	RNA-binding protein 42 OS=Mus musculus GN=Rbm42 PE=1 SV=1	[more]
RBM42_RAT	2.3e-43	49.74	RNA-binding protein 42 OS=Rattus norvegicus GN=Rbm42 PE=1 SV=1	[more]

BLAST of Cucsa.178480 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LH39_CUCSA	9.5e-145	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G075290 PE=4 SV=1	[more]
F6H614_VITVI	2.2e-117	83.59	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0036g00630 PE=4 SV=...	[more]
F6HBY9_VITVI	1.9e-113	82.49	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0018g01710 PE=4 SV=...	[more]
A5B7R7_VITVI	4.3e-113	82.10	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_033169 PE=4 SV=1	[more]
A0A067JW37_JATCU	1.1e-108	81.18	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23547 PE=4 SV=1	[more]

BLAST of Cucsa.178480 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G04500.1	2.9e-100	73.33	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G14100.1	4.8e-15	30.88	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G54080.2	1.1e-14	28.51	oligouridylate-binding protein 1A	[more]
AT1G17370.1	2.6e-13	27.23	oligouridylate binding protein 1B	[more]
AT3G19130.1	2.2e-12	46.05	RNA-binding protein 47B	[more]

BLAST of Cucsa.178480 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449470234\|ref\|XP_004152823.1\|	1.4e-144	100.00	PREDICTED: RNA-binding protein 42 [Cucumis sativus]	[more]
gi\|659082432\|ref\|XP_008441837.1\|	2.6e-143	99.21	PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 42 [Cucumis melo]	[more]
gi\|359488053\|ref\|XP_002266454.2\|	3.2e-117	83.59	PREDICTED: RNA-binding protein 42-like isoform X1 [Vitis vinifera]	[more]
gi\|1009117912\|ref\|XP_015875574.1\|	9.5e-114	81.85	PREDICTED: RNA-binding protein 42 isoform X1 [Ziziphus jujuba]	[more]
gi\|225443254\|ref\|XP_002272469.1\|	2.8e-113	82.49	PREDICTED: RNA-binding protein 42 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000504	RRM_dom
IPR012677	Nucleotide-bd_a/b_plait_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0000166	nucleotide binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0000166	nucleotide binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.178480.1	Cucsa.178480.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 147..217 score: 5.5
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 146..219 score: 2.6
IPR000504	RNA recognition motif domain	PROFILE	PS50102	RRM	coord: 145..223 score: 16
IPR012677	Nucleotide-binding alpha-beta plait domain	GENE3D	G3DSA:3.30.70.330		coord: 141..228 score: 4.6
IPR012677	Nucleotide-binding alpha-beta plait domain	unknown	SSF54928	RNA-binding domain, RBD	coord: 128..225 score: 9.27
None	No IPR available	PANTHER	PTHR24012	FAMILY NOT NAMED	coord: 132..226 score: 2.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.178480	Csa2G075290	Cucumber (Chinese Long) v2	cgycuB274
Cucsa.178480	MELO3C008710	Melon (DHL92) v3.5.1	cgymeB320
Cucsa.178480	CSPI02G07290	Wild cucumber (PI 183967)	cgycpiB284
Cucsa.178480	CmaCh12G009600	Cucurbita maxima (Rimu)	cgycmaB0509
Cucsa.178480	CmaCh05G007620	Cucurbita maxima (Rimu)	cgycmaB0510
Cucsa.178480	CmoCh12G009630	Cucurbita moschata (Rifu)	cgycmoB0509
Cucsa.178480	CmoCh05G008030	Cucurbita moschata (Rifu)	cgycmoB0510
Cucsa.178480	Cp4.1LG11g06850	Cucurbita pepo (Zucchini)	cgycpeB0491
Cucsa.178480	Cp4.1LG07g07960	Cucurbita pepo (Zucchini)	cgycpeB0492
Cucsa.178480	CsaV3_2G009740	Cucumber (Chinese Long) v3	cgycucB287
Cucsa.178480	Bhi06G000975	Wax gourd	cgywgoB368
Cucsa.178480	Carg26545	Silver-seed gourd	carcgyB0805
Cucsa.178480	Carg19845	Silver-seed gourd	carcgyB0204

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.178480	Watermelon (Charleston Gray)	cgywcgB319
Cucsa.178480	Watermelon (97103) v1	cgywmB342
Cucsa.178480	Bottle gourd (USVL1VR-Ls)	cgylsiB300
Cucsa.178480	Melon (DHL92) v3.6.1	cgymedB315
Cucsa.178480	Watermelon (97103) v2	cgywmbB323
Cucsa.178480	Wax gourd	cgywgoB366