Cucsa.143320 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.143320
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	PRELI/MSF1-like protein
Location	scaffold01079 : 1659518 .. 1663541 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTTCAACCGCCCACCGAAATCCGACCTCCGTTGCGCCGCTCGACTCACCGGACGACGATCACCACGCTGCACCGCAACTCTTCAGGCCGATTTTAAGGGTCAACCGGCCTTGATCGGCGTCGCTCTCTCCGACTTCCTCCACGGATTTCGTCGTCAGTCGAGCCGTTCAACACCTAACCATCTTTCGCCGTCATCCCGCTAGCCGAATCGTCAGTAGCCTCGTTCTTTTCCGGTAAAATTTATTTGTTTTAGTTGGATTTCTGGAAGATTTTCGACTACCCATTAAGTTTCGGATTTTATTTTCCAATATCCATTACATTTTGATGTTACATTTGGGTTCTTGGGAGATTTTAGCTGCTGTCCAGCCGTTAGGAAATGCGAAATTGAGTGTTTTGGCACACGTTGGGTAAGATTCTAAGCCGGGTGACGAGCACCCATCTAAGTTTGGTACTAATGTAGAATAATCTATGGTATTGGATGCTAGATTTCGAACTTAGAAGGTTGTTCGAGTGCTGTGCATTGGAATTAAGGCTACTTTGATAAGTGTTTGATAAGATTTTGGGTAAGTTTCGTGAATATCCATTTAGTTTTGACATGACATTACCACAAGATTGGAGACTTGGAGAATTCTAAAGCATTGTTCACCATACTTAAAGATCGATAGCTTGAGTTGTCATAATGAAGTGTTTTGGAGATTGTTGTGTCATCTTGCCATGTAATGTTTACTTAGTAACCCCAATCATTGTTTTCAAGTCAAACTGAAGTTGGAAAAGTTTATTATCCCGGGGATTGCGTTATTGATGGCCAGTAGTTCATTTTCAAGCTTTCTATGTAGAATCTATATATGTGTTATTTTATGATATGGCTTTGAAACTACCTTTGCTTAAACTTCTTTATTCGTGTTTTAATTAATACTTAAATGATGTGTTCACTCTTCATCATTTTAAGAATTTGTATGGCTTGAATTTTATAAAAAATGTGTTTTCAGTTTTTGATTGGTACTTTCATGCCTCAATCTAGGTTAGTGTGGAAAAACCAGAACGAGGTGTGACAGACAATTTTGTCATAAAAACACTAAACCCTTTATTTGAAGTCTCTCCAATTAATATGATTTTCTTCTTGCGCAAACCTTTGATTTACCAAGAAATTTTCTTTCCTTTTTTGTTGATTTTGATTTTGAAGGTTGAGATCTTGACCCATTGGAACTGCCTTCTCCTGCCGCTGACGAACCCCATCATCTTCAATTTCTCAGGTGAACTTTTTTTTTTCTTTCATCTCTTTTGCTCTTTCTGTGACATGGGTTTTGATTCCATTTTGTTAAGCTCATCTTTAGGGCTTTTGTTTTCTTACCTTTATACTGCTTTCTTTGGATTTCTGTGTAATTGCTGTTGAGATTGTGATTCTCATATGCACCCACCCAGCAATGATTTGAATTCTGAACTACCTGCGCTAGCTGCCTGTGAAACTGGAAACTGGACCAGTTTTGTATTTCCTCTCTTCAAATTCAAAGGATGGAATTGTGGTTATTGAGAGTGGGTGAAAAAAACTGAAAAGGATTATATGGATGACTGCCACTTCTTTTGATGGATCACTGTTTGTTGTACAGTTTTACTTGCAAATTTTTGACTTAGTGTATTTGCCAATTGGTTTGAGCTTGATGAATTGTTGAAAACACCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCAGTTTTTTGTTATCACATTTTTTATCACTTGTGATGGCCAGATGCTGTTTCAAAAGTGTCTTTGTGTTAAACTACCCTTAAAAGTCAAAGTTAAGTTGATTTGTTATGGTATATTTGCACAAGTTTTAACAAAGAACTATCCATATTGATTAGCGAGAAATAACATAATGGGAATTTGAACAGTGTGGCATGGTGTTAGATTCTCAAAATCTAGAAGTGATTTCCTCTTTTTCTTTTTCTTTTTTTTCTCTCTTCCTCTTTCGGTTGTTAAATTGGTGAAGATATGTTTCCCTTTTCTCTTTTTCCCCGTTTTCCTACTTCAGTTTTTATTACCAATGTTTTCTCTCTTCTAATGGCTAGATGCAGTTGGAAGACTGTCTTGTGTTAAACTACCCTTAAAAGTCAAAGCCAAGTTGATTTGTTGCGTTATATTTTCACATGTCCCTACAAACAACTGTTGATGTTTATTAGTGAGAAAATAACATGAGTAGTGTGGCACGGTGTTAGATTCACAAAATCTTCAAGTTTGTTAACTATGTTCCTTGCATCTTAGGTTTCAAAACTATTTTCATGTTTTACTGTGGATTTTTTTTTTTGCTGTTCGAAGAATGGATAACATTTTTTGTACCATATCATTATTTGGATTGATCTGAAACAATTGTTCAGTTTGGTACTTTATTTATTCTCTAAAAATGAGAATCACTTGAATGAATGTATTGGACAAATAGTGAAAGAACAGAACTACACGAATGATTATTAGAAGCAACACGCCAACACCTCCCTTCAGAAAATGTGTTGAGTTACAGGGAAAACTACAATTTGACTATAAAATCTGTTTCTGCGAATGAACTATTATGAATTTTAAATAACTTTTGGTGGTTTGATCAAATAAAATTTTACTGTTCCCATTTATTTGACTTATGCACCGGTGATGCCCAAGTTCTTTAGTTTTTCCTTGTTGCTGTCTTAGATGATGTATAGGGTTTATTATTTTTTTATCAATGTTACATTGTATGTGCTCTCTTCTGTCCTGATTTTAACGTCTGGTACATATTCATTATCTTCATTGATGTTTTTATTTTCCCTTTTCCATTCCTTCTCTGCTGAACTAGTAGGTGTACAATTAATTTAGCGGTTTGTTCATATGCAGACTAGTTAACTTTGCTTTTGGCGGTCTGAGAACAGCGTAATGGTTAAAGCATACTCTCAGGAGTACACTTACAAGCACCCGTGGGAACGGGTAACTTGTGCATCTTGGCGTAAATTTGCCGATCCTGAAAACAAGCGTACATTGTCACATATTCTTGAAGTTGATACCTTGAACAGAAAGGTAGATGCTGAATCTGGGAAGCTATATACAACTCGTGCTATCACCATCCATGCCCCTGGACCATGGTTTGTCCGTAAAATTGTTGGTCAGGATATTTGCCATTGTGTTGAATCTACTGTCGTAGATGCTCGGTCACAATCAATGCAACTCACCACTCGGAATATTAGTCTCCAGAAATTCATAGAAGTGGTTGAAAAAATTAGGTACGAACCTCACCCAGAAAATCCGAACGGATGGACTATTTGCAAACAGGAGACTAGTATTCAAATCAAGCCATTGTCAGCACTGGCATCGATGGCTGAAAAAGTGGAGCAACGGTGTGCCGAGAAGTTTGTCCAAAACAGTGCCAAAGGTAGAGAAGTGATGGAGAGGATTTGTAAGTATCTTGAAGCAGAATCAAGTGGATTCGCAATCTAACTTTTACTTCCTCTCCCTGTTATGCACCGGTTCAAAGGGATCGATAAGAATATTTCCAGAGACAAGGTGTTTTATGCCAAAATAATTCTCATGGAGAAGCAGAAAGCATCATATTAGAACTCTTCCCAAGTTTTGTTAAGATGAGATTTAATTATAGAGCATCATGTACTATTGATGTTTCCTGTCATCTTCCAGCTTTTAGTTGATTGCTTGTAAAATGACCTTGATTTTCCTCATAACCTCTAATAAATATGCTTACAGAAT

mRNA sequence

TCTTCAACCGCCCACCGAAATCCGACCTCCGTTGCGCCGCTCGACTCACCGGACGACGATCACCACGCTGCACCGCAACTCTTCAGGCCGATTTTAAGGGTCAACCGGCCTTGATCGGCGTCGCTCTCTCCGACTTCCTCCACGGATTTCGTCGTCAGTCGAGCCGTTCAACACCTAACCATCTTTCGCCGTCATCCCGCTAGCCGAATCGTCAGTAGCCTCGTTCTTTTCCGCTGCTGTCCAGCCGTTAGGAAATGCGAAATTGAGTGTTTTGGCACACGTTGGGTTGAGATCTTGACCCATTGGAACTGCCTTCTCCTGCCGCTGACGAACCCCATCATCTTCAATTTCTCAGACTAGTTAACTTTGCTTTTGGCGGTCTGAGAACAGCGTAATGGTTAAAGCATACTCTCAGGAGTACACTTACAAGCACCCGTGGGAACGGGTAACTTGTGCATCTTGGCGTAAATTTGCCGATCCTGAAAACAAGCGTACATTGTCACATATTCTTGAAGTTGATACCTTGAACAGAAAGGTAGATGCTGAATCTGGGAAGCTATATACAACTCGTGCTATCACCATCCATGCCCCTGGACCATGGTTTGTCCGTAAAATTGTTGGTCAGGATATTTGCCATTGTGTTGAATCTACTGTCGTAGATGCTCGGTCACAATCAATGCAACTCACCACTCGGAATATTAGTCTCCAGAAATTCATAGAAGTGGTTGAAAAAATTAGGTACGAACCTCACCCAGAAAATCCGAACGGATGGACTATTTGCAAACAGGAGACTAGTATTCAAATCAAGCCATTGTCAGCACTGGCATCGATGGCTGAAAAAGTGGAGCAACGGTGTGCCGAGAAGTTTGTCCAAAACAGTGCCAAAGGTAGAGAAGTGATGGAGAGGATTTGTAAGTATCTTGAAGCAGAATCAAGTGGATTCGCAATCTAACTTTTACTTCCTCTCCCTGTTATGCACCGGTTCAAAGGGATCGATAAGAATATTTCCAGAGACAAGGTGTTTTATGCCAAAATAATTCTCATGGAGAAGCAGAAAGCATCATATTAGAACTCTTCCCAAGTTTTGTTAAGATGAGATTTAATTATAGAGCATCATGTACTATTGATGTTTCCTGTCATCTTCCAGCTTTTAGTTGATTGCTTGTAAAATGACCTTGATTTTCCTCATAACCTCTAATAAATATGCTTACAGAAT

Coding sequence (CDS)

ATGGTTAAAGCATACTCTCAGGAGTACACTTACAAGCACCCGTGGGAACGGGTAACTTGTGCATCTTGGCGTAAATTTGCCGATCCTGAAAACAAGCGTACATTGTCACATATTCTTGAAGTTGATACCTTGAACAGAAAGGTAGATGCTGAATCTGGGAAGCTATATACAACTCGTGCTATCACCATCCATGCCCCTGGACCATGGTTTGTCCGTAAAATTGTTGGTCAGGATATTTGCCATTGTGTTGAATCTACTGTCGTAGATGCTCGGTCACAATCAATGCAACTCACCACTCGGAATATTAGTCTCCAGAAATTCATAGAAGTGGTTGAAAAAATTAGGTACGAACCTCACCCAGAAAATCCGAACGGATGGACTATTTGCAAACAGGAGACTAGTATTCAAATCAAGCCATTGTCAGCACTGGCATCGATGGCTGAAAAAGTGGAGCAACGGTGTGCCGAGAAGTTTGTCCAAAACAGTGCCAAAGGTAGAGAAGTGATGGAGAGGATTTGTAAGTATCTTGAAGCAGAATCAAGTGGATTCGCAATCTAA

Protein sequence

MVKAYSQEYTYKHPWERVTCASWRKFADPENKRTLSHILEVDTLNRKVDAESGKLYTTRAITIHAPGPWFVRKIVGQDICHCVESTVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHPENPNGWTICKQETSIQIKPLSALASMAEKVEQRCAEKFVQNSAKGREVMERICKYLEAESSGFAI*

Homology

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BLAST of Cucsa.143320 vs. Swiss-Prot
Match: SLMO_DICDI (Protein slowmo homolog OS=Dictyostelium discoideum GN=slmo PE=3 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 6.3e-22
Identity = 56/163 (34.36%), Postives = 92/163 (56.44%), Query Frame = 1


Query: 8   EYTYKHPWERVTCASWRKFADPENKRTLSHILEVDTLNRKVDAESGKLYTTRAITIHAPG 67
           ++TYKH W   + AS+RK+  PE       IL +D L++++D  +G L  T+ I      
Sbjct: 8   KHTYKHLWSDASTASFRKYPSPERP----DILSIDILSKEIDPTTGVLKCTKLIICKGNT 67

Query: 68  PWFVRKIVGQDICHCVESTVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHPENPNGWT 127
           P +++ I+G   C   E T VD +++ M L T+N++    + V E   YE HP+N   WT
Sbjct: 68  PSWLKSILGSGECLFYEETTVDPKNKIMTLKTKNLNFTNILGVDEVCTYEQHPDNEE-WT 127

Query: 128 ICKQETSIQIKPLSALASMAEKVEQRCAEKFVQNSAKGREVME 171
           +  QE ++     S++  +A K+E  C ++FV N+ KGR++ME
Sbjct: 128 LFTQEATVT----SSIFGVARKMEAFCLDRFVANAGKGRKIME 161

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BLAST of Cucsa.143320 vs. Swiss-Prot
Match: PLD3B_PIG (PRELI domain containing protein 3B OS=Sus scrofa GN=PRELID3B PE=3 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 8.5e-19
Identity = 60/180 (33.33%), Postives = 100/180 (55.56%), Query Frame = 1


Query: 2   VKAYSQEYTYKHPWERVTCASWRKFADPENKRTLSHILEVDTLNRKVDAESGKLYTTRAI 61
           +K ++ E+ + HPWE VT A+ +K+ +P N      ++ VD L+R +DA SGKL++ R +
Sbjct: 1   MKIWTSEHVFDHPWETVTTAAMQKYPNPMNPS----VVGVDVLDRHIDA-SGKLHSHRLL 60

Query: 62  TIHAPGPWFVRKIVG--QDICHCVESTVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPH 121
           +     P  V+ I+G  +   +  E +VVD  +++M+L + NIS    + V E++ Y+PH
Sbjct: 61  STEWGLPSIVKSIIGAARTKTYVQEHSVVDPVAKTMELKSTNISFTNMVSVDERLIYKPH 120

Query: 122 PENPNGWTICKQETSIQIKPLSALASMAEKVEQRCAEKFVQNSAKGREVMERICKYLEAE 180
           P++    T+  QE  I +K +    S+   +E   A     N+ KGRE ME +   L AE
Sbjct: 121 PQDSEK-TVLTQEAIITVKGV----SLGSYLEGLMASTISSNANKGREAMEWVIHKLNAE 170

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BLAST of Cucsa.143320 vs. Swiss-Prot
Match: UPS2_YEAST (Protein UPS2, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UPS2 PE=1 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.1e-18
Identity = 46/166 (27.71%), Postives = 92/166 (55.42%), Query Frame = 1


Query: 2   VKAYSQEYTYKHPWERVTCASWRKFADPENKRTLSHILEVDTLNRKVDAESGKLYTTRAI 61
           +K +   Y + +PW++VT A+W+K+ +  +    +H++ VD L R++  +   L T R I
Sbjct: 1   MKLFQNSYDFNYPWDQVTAANWKKYPNEIS----THVIAVDVLRRELKDQGKVLVTERLI 60

Query: 62  TIHAPGP-WFVRKIVGQDICHCVESTVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP 121
           T+    P W +  + G ++ H  E +VVD   +S+ + + N+++   ++V E + Y PHP
Sbjct: 61  TVKQGVPKWIMMMLGGTNMSHVREVSVVDLNKKSLTMRSCNLTMCNLLKVYETVTYSPHP 120

Query: 122 ENPNGWTICKQETSIQIKPLSALASMAEKVEQRCAEKFVQNSAKGR 167
           ++    T+ +QE   QI    ++  +  K+E    ++F +N+ KG+
Sbjct: 121 DDSANKTLFQQEA--QITAYGSIRKLCNKMEDWSVQRFCENAKKGK 160

[Close]

BLAST of Cucsa.143320 vs. Swiss-Prot
Match: PLD3B_MOUSE (PRELI domain containing protein 3B OS=Mus musculus GN=Prelid3b PE=1 SV=2)

HSP 1 Score: 94.4 bits (233), Expect = 1.4e-18
Identity = 59/180 (32.78%), Postives = 101/180 (56.11%), Query Frame = 1


Query: 2   VKAYSQEYTYKHPWERVTCASWRKFADPENKRTLSHILEVDTLNRKVDAESGKLYTTRAI 61
           +K ++ E+ + HPWE VT A+ +K+ +P N      ++ VD L+R VD  SGKL++ R +
Sbjct: 1   MKIWTSEHVFDHPWETVTTAAMQKYPNPMNPS----VVGVDVLDRHVDP-SGKLHSHRLL 60

Query: 62  TIHAPGPWFVRKIVG--QDICHCVESTVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPH 121
           +     P  V+ ++G  +   +  E +VVD  +++M+L + NIS    + V E++ Y+PH
Sbjct: 61  STEWGLPSIVKSLIGAARTKTYVQEHSVVDPVTRTMELKSTNISFTNMVSVDERLTYKPH 120

Query: 122 PENPNGWTICKQETSIQIKPLSALASMAEKVEQRCAEKFVQNSAKGREVMERICKYLEAE 180
            ++P   T+  QE  I +K +    S++  +E   A     N++KGRE ME +   L AE
Sbjct: 121 LQDPEK-TVLTQEALITVKGV----SLSSYLEGLMASTISSNASKGREAMEWVIHKLNAE 170

[Close]

BLAST of Cucsa.143320 vs. Swiss-Prot
Match: PLD3A_HUMAN (PRELI domain containing protein 3A OS=Homo sapiens GN=PRELID3A PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 4.2e-18
Identity = 60/182 (32.97%), Postives = 97/182 (53.30%), Query Frame = 1


Query: 2   VKAYSQEYTYKHPWERVTCASWRKFADPENKRTLSHILEVDTLNRKVDAESGKLYTTRAI 61
           +K +S E+ + HPW+ V  A+ RK+ +P N      +L VD L R+VD   G+L++ R +
Sbjct: 1   MKIWSSEHVFGHPWDTVIQAAMRKYPNPMNPS----VLGVDVLQRRVDGR-GRLHSLRLL 60

Query: 62  TIHAPGPWFVRKIVG--QDICHCVESTVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPH 121
           +     P  VR I+G  + + +  E +VVD   + M+L + NI+L   + V E++ Y PH
Sbjct: 61  STEWGLPSLVRAILGTSRTLTYIREHSVVDPVEKKMELCSTNITLTNLVSVNERLVYTPH 120

Query: 122 PENPNGWTICKQETSIQIKPLSALASMAEKVEQRCAEKFVQNSAKGREVMERICKYLEAE 181
           PENP   T+  QE  I +K +    S+   +E   A     N+ KG   +E I ++ E+ 
Sbjct: 121 PENPE-MTVLTQEAIITVKGI----SLGSYLESLMANTISSNAKKGWAAIEWIIEHSESA 172

[Close]

BLAST of Cucsa.143320 vs. TrEMBL
Match: A0A0A0LXA5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G613520 PE=4 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 1.9e-102
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 1


Query: 1   MVKAYSQEYTYKHPWERVTCASWRKFADPENKRTLSHILEVDTLNRKVDAESGKLYTTRA 60
           MVKAYSQEYTYKHPWERVTCASWRKFADPENKRTLSHILEVDTLNRKVDAESGKLYTTRA
Sbjct: 1   MVKAYSQEYTYKHPWERVTCASWRKFADPENKRTLSHILEVDTLNRKVDAESGKLYTTRA 60

Query: 61  ITIHAPGPWFVRKIVGQDICHCVESTVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP 120
           ITIHAPGPWFVRKIVGQDICHCVESTVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP
Sbjct: 61  ITIHAPGPWFVRKIVGQDICHCVESTVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP 120

Query: 121 ENPNGWTICKQETSIQIKPLSALASMAEKVEQRCAEKFVQNSAKGREVMERICKYLEAES 180
           ENPNGWTICKQETSIQIKPLSALASMAEKVEQRCAEKFVQNSAKGREVMERICKYLEAES
Sbjct: 121 ENPNGWTICKQETSIQIKPLSALASMAEKVEQRCAEKFVQNSAKGREVMERICKYLEAES 180

Query: 181 SGFAI 186
           SGFAI
Sbjct: 181 SGFAI 185

[Close]

BLAST of Cucsa.143320 vs. TrEMBL
Match: A0A0D2TL46_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G072300 PE=4 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 5.8e-91
Identity = 162/185 (87.57%), Postives = 176/185 (95.14%), Query Frame = 1


Query: 1   MVKAYSQEYTYKHPWERVTCASWRKFADPENKRTLSHILEVDTLNRKVDAESGKLYTTRA 60
           MVKAY+QE+ YKHPWERVT ASWRKFADPENKRTLSHILEVDTLNRK+D  SGKLYTTRA
Sbjct: 1   MVKAYAQEHIYKHPWERVTSASWRKFADPENKRTLSHILEVDTLNRKLDPLSGKLYTTRA 60

Query: 61  ITIHAPGPWFVRKIVGQDICHCVESTVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP 120
           +TIHAPGPWFVRKIVGQDICHCVESTVVDA+S+SMQL TRN+SLQKFIEV EKIRY+PHP
Sbjct: 61  LTIHAPGPWFVRKIVGQDICHCVESTVVDAQSKSMQLATRNVSLQKFIEVEEKIRYDPHP 120

Query: 121 ENPNGWTICKQETSIQIKPLSALASMAEKVEQRCAEKFVQNSAKGREVMERICKYLEAES 180
           +NP GWTIC+QETSI+IKPLSALASMAEKVEQRCAE+F+QNS KGREVMERICKYLEAES
Sbjct: 121 DNPTGWTICRQETSIRIKPLSALASMAEKVEQRCAERFMQNSVKGREVMERICKYLEAES 180

Query: 181 SGFAI 186
           SG A+
Sbjct: 181 SGMAL 185

[Close]

BLAST of Cucsa.143320 vs. TrEMBL
Match: A0A061GTV2_THECC (MSF1-like family protein isoform 1 OS=Theobroma cacao GN=TCM_040594 PE=4 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 7.5e-91
Identity = 158/185 (85.41%), Postives = 178/185 (96.22%), Query Frame = 1


Query: 1   MVKAYSQEYTYKHPWERVTCASWRKFADPENKRTLSHILEVDTLNRKVDAESGKLYTTRA 60
           MVK Y+Q++ YKHPWERVT ASWRKFADPENKRTLSHILEVDTLNR++D +SG+LYTTRA
Sbjct: 1   MVKGYTQDHIYKHPWERVTSASWRKFADPENKRTLSHILEVDTLNRRLDPDSGRLYTTRA 60

Query: 61  ITIHAPGPWFVRKIVGQDICHCVESTVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP 120
           +TIHAPGPWF+RKI+GQDICHCVESTVVDA+S+SMQLTTRN+SLQKFIEV EKIRY+PHP
Sbjct: 61  LTIHAPGPWFIRKIIGQDICHCVESTVVDAQSKSMQLTTRNVSLQKFIEVEEKIRYDPHP 120

Query: 121 ENPNGWTICKQETSIQIKPLSALASMAEKVEQRCAEKFVQNSAKGREVMERICKYLEAES 180
           +NP GWTIC+QETSI+IKPLSALASMAEKVEQRCAE+F+QNSAKGREVMERICKYLEAES
Sbjct: 121 DNPTGWTICRQETSIRIKPLSALASMAEKVEQRCAERFMQNSAKGREVMERICKYLEAES 180

Query: 181 SGFAI 186
           SG A+
Sbjct: 181 SGMAL 185

[Close]

BLAST of Cucsa.143320 vs. TrEMBL
Match: M5W0C5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012045mg PE=4 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 3.7e-90
Identity = 159/184 (86.41%), Postives = 175/184 (95.11%), Query Frame = 1


Query: 1   MVKAYSQEYTYKHPWERVTCASWRKFADPENKRTLSHILEVDTLNRKVDAESGKLYTTRA 60
           MVKAY+QEYTYKHPWERVT ASW+KFADPENKRTLSHILEVDTLN K+D  +GKLYTTRA
Sbjct: 1   MVKAYTQEYTYKHPWERVTSASWKKFADPENKRTLSHILEVDTLNHKLDPSTGKLYTTRA 60

Query: 61  ITIHAPGPWFVRKIVGQDICHCVESTVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP 120
           IT+H+PGPWFVRKIV QD+CHCVESTVVDA+++SMQLTT NISL+KFIEV EKIRY+PHP
Sbjct: 61  ITVHSPGPWFVRKIVRQDVCHCVESTVVDAKTRSMQLTTNNISLEKFIEVEEKIRYDPHP 120

Query: 121 ENPNGWTICKQETSIQIKPLSALASMAEKVEQRCAEKFVQNSAKGREVMERICKYLEAES 180
           ENP+GWTIC+QETSI+IKPLSALASMAEKVEQRCAE+FVQNSAKGREVMERICKYLEAES
Sbjct: 121 ENPDGWTICRQETSIRIKPLSALASMAEKVEQRCAERFVQNSAKGREVMERICKYLEAES 180

Query: 181 SGFA 185
            G A
Sbjct: 181 KGLA 184

[Close]

BLAST of Cucsa.143320 vs. TrEMBL
Match: W9RTE2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_015260 PE=4 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 3.7e-90
Identity = 160/185 (86.49%), Postives = 175/185 (94.59%), Query Frame = 1


Query: 1   MVKAYSQEYTYKHPWERVTCASWRKFADPENKRTLSHILEVDTLNRKVDAESGKLYTTRA 60
           MV+AY QEYTY+HPWERVT ASWRKFADPENKRTLSHILEVDTLN K+D +SGKLYTTRA
Sbjct: 1   MVRAYRQEYTYRHPWERVTSASWRKFADPENKRTLSHILEVDTLNHKLDPDSGKLYTTRA 60

Query: 61  ITIHAPGPWFVRKIVGQDICHCVESTVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP 120
           ITIHAPGPWF+ KIVGQDICHCVESTVVD +S+SMQLTTRNISLQKFIEV EKIRY+PHP
Sbjct: 61  ITIHAPGPWFIHKIVGQDICHCVESTVVDGQSRSMQLTTRNISLQKFIEVEEKIRYDPHP 120

Query: 121 ENPNGWTICKQETSIQIKPLSALASMAEKVEQRCAEKFVQNSAKGREVMERICKYLEAES 180
           +NP+ W IC+Q+TSI+IKPLSALASMAEKVEQRCAEKFVQNSAKGREVMERICKYLEAES
Sbjct: 121 DNPDKWAICRQQTSIRIKPLSALASMAEKVEQRCAEKFVQNSAKGREVMERICKYLEAES 180

Query: 181 SGFAI 186
           SG ++
Sbjct: 181 SGISL 185

[Close]

BLAST of Cucsa.143320 vs. TAIR10
Match: AT5G13070.1 (AT5G13070.1 MSF1-like family protein)

HSP 1 Score: 322.8 bits (826), Expect = 1.4e-88
Identity = 148/181 (81.77%), Postives = 171/181 (94.48%), Query Frame = 1


Query: 1   MVKAYSQEYTYKHPWERVTCASWRKFADPENKRTLSHILEVDTLNRKVDAESGKLYTTRA 60
           MVKAY QE+ YKHPWERV+ ASWRKFADPENKR LSHILEVDTLNRK+D E+GKL+TTRA
Sbjct: 1   MVKAYRQEHVYKHPWERVSAASWRKFADPENKRILSHILEVDTLNRKLDTETGKLHTTRA 60

Query: 61  ITIHAPGPWFVRKIVGQDICHCVESTVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP 120
           +TIHAPGPWF+ +I+GQDICHCVESTVVD +S+SMQLTT+NISL+KFIEV E+IRY+PHP
Sbjct: 61  LTIHAPGPWFLHRIIGQDICHCVESTVVDGKSRSMQLTTKNISLKKFIEVEERIRYDPHP 120

Query: 121 ENPNGWTICKQETSIQIKPLSALASMAEKVEQRCAEKFVQNSAKGREVMERICKYLEAES 180
           +NP+ WT+C QETSI+IKPLSALASMAEKVEQ+CAEKF+QNSAKGREVMERICKY+EAES
Sbjct: 121 DNPSAWTVCSQETSIRIKPLSALASMAEKVEQKCAEKFMQNSAKGREVMERICKYMEAES 180

Query: 181 S 182
           +
Sbjct: 181 A 181

[Close]

BLAST of Cucsa.143320 vs. NCBI nr
Match: gi|778663639|ref|XP_011660128.1| (PREDICTED: protein slowmo homolog [Cucumis sativus])

HSP 1 Score: 379.8 bits (974), Expect = 2.7e-102
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 1


Query: 1   MVKAYSQEYTYKHPWERVTCASWRKFADPENKRTLSHILEVDTLNRKVDAESGKLYTTRA 60
           MVKAYSQEYTYKHPWERVTCASWRKFADPENKRTLSHILEVDTLNRKVDAESGKLYTTRA
Sbjct: 1   MVKAYSQEYTYKHPWERVTCASWRKFADPENKRTLSHILEVDTLNRKVDAESGKLYTTRA 60

Query: 61  ITIHAPGPWFVRKIVGQDICHCVESTVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP 120
           ITIHAPGPWFVRKIVGQDICHCVESTVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP
Sbjct: 61  ITIHAPGPWFVRKIVGQDICHCVESTVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP 120

Query: 121 ENPNGWTICKQETSIQIKPLSALASMAEKVEQRCAEKFVQNSAKGREVMERICKYLEAES 180
           ENPNGWTICKQETSIQIKPLSALASMAEKVEQRCAEKFVQNSAKGREVMERICKYLEAES
Sbjct: 121 ENPNGWTICKQETSIQIKPLSALASMAEKVEQRCAEKFVQNSAKGREVMERICKYLEAES 180

Query: 181 SGFAI 186
           SGFAI
Sbjct: 181 SGFAI 185

[Close]

BLAST of Cucsa.143320 vs. NCBI nr
Match: gi|659099113|ref|XP_008450435.1| (PREDICTED: protein slowmo homolog [Cucumis melo])

HSP 1 Score: 377.1 bits (967), Expect = 1.8e-101
Identity = 183/185 (98.92%), Postives = 185/185 (100.00%), Query Frame = 1


Query: 1   MVKAYSQEYTYKHPWERVTCASWRKFADPENKRTLSHILEVDTLNRKVDAESGKLYTTRA 60
           MVKAYSQEYTYKHPWERVTCASWRKFADPENKRTLSHILEVDTLNRKVDAESGKLYTTRA
Sbjct: 1   MVKAYSQEYTYKHPWERVTCASWRKFADPENKRTLSHILEVDTLNRKVDAESGKLYTTRA 60

Query: 61  ITIHAPGPWFVRKIVGQDICHCVESTVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP 120
           ITIHAPGPWFVRKIVGQDICHCVESTVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP
Sbjct: 61  ITIHAPGPWFVRKIVGQDICHCVESTVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP 120

Query: 121 ENPNGWTICKQETSIQIKPLSALASMAEKVEQRCAEKFVQNSAKGREVMERICKYLEAES 180
           ENPNGWTICKQETSI+IKPLSALASMAEKVEQRCAE+FVQNSAKGREVMERICKYLEAES
Sbjct: 121 ENPNGWTICKQETSIRIKPLSALASMAEKVEQRCAERFVQNSAKGREVMERICKYLEAES 180

Query: 181 SGFAI 186
           SGFAI
Sbjct: 181 SGFAI 185

[Close]

BLAST of Cucsa.143320 vs. NCBI nr
Match: gi|823223791|ref|XP_012444646.1| (PREDICTED: protein slowmo homolog [Gossypium raimondii])

HSP 1 Score: 341.7 bits (875), Expect = 8.3e-91
Identity = 162/185 (87.57%), Postives = 176/185 (95.14%), Query Frame = 1


Query: 1   MVKAYSQEYTYKHPWERVTCASWRKFADPENKRTLSHILEVDTLNRKVDAESGKLYTTRA 60
           MVKAY+QE+ YKHPWERVT ASWRKFADPENKRTLSHILEVDTLNRK+D  SGKLYTTRA
Sbjct: 1   MVKAYAQEHIYKHPWERVTSASWRKFADPENKRTLSHILEVDTLNRKLDPLSGKLYTTRA 60

Query: 61  ITIHAPGPWFVRKIVGQDICHCVESTVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP 120
           +TIHAPGPWFVRKIVGQDICHCVESTVVDA+S+SMQL TRN+SLQKFIEV EKIRY+PHP
Sbjct: 61  LTIHAPGPWFVRKIVGQDICHCVESTVVDAQSKSMQLATRNVSLQKFIEVEEKIRYDPHP 120

Query: 121 ENPNGWTICKQETSIQIKPLSALASMAEKVEQRCAEKFVQNSAKGREVMERICKYLEAES 180
           +NP GWTIC+QETSI+IKPLSALASMAEKVEQRCAE+F+QNS KGREVMERICKYLEAES
Sbjct: 121 DNPTGWTICRQETSIRIKPLSALASMAEKVEQRCAERFMQNSVKGREVMERICKYLEAES 180

Query: 181 SGFAI 186
           SG A+
Sbjct: 181 SGMAL 185

[Close]

BLAST of Cucsa.143320 vs. NCBI nr
Match: gi|590583697|ref|XP_007014971.1| (MSF1-like family protein isoform 1 [Theobroma cacao])

HSP 1 Score: 341.3 bits (874), Expect = 1.1e-90
Identity = 158/185 (85.41%), Postives = 178/185 (96.22%), Query Frame = 1


Query: 1   MVKAYSQEYTYKHPWERVTCASWRKFADPENKRTLSHILEVDTLNRKVDAESGKLYTTRA 60
           MVK Y+Q++ YKHPWERVT ASWRKFADPENKRTLSHILEVDTLNR++D +SG+LYTTRA
Sbjct: 1   MVKGYTQDHIYKHPWERVTSASWRKFADPENKRTLSHILEVDTLNRRLDPDSGRLYTTRA 60

Query: 61  ITIHAPGPWFVRKIVGQDICHCVESTVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP 120
           +TIHAPGPWF+RKI+GQDICHCVESTVVDA+S+SMQLTTRN+SLQKFIEV EKIRY+PHP
Sbjct: 61  LTIHAPGPWFIRKIIGQDICHCVESTVVDAQSKSMQLTTRNVSLQKFIEVEEKIRYDPHP 120

Query: 121 ENPNGWTICKQETSIQIKPLSALASMAEKVEQRCAEKFVQNSAKGREVMERICKYLEAES 180
           +NP GWTIC+QETSI+IKPLSALASMAEKVEQRCAE+F+QNSAKGREVMERICKYLEAES
Sbjct: 121 DNPTGWTICRQETSIRIKPLSALASMAEKVEQRCAERFMQNSAKGREVMERICKYLEAES 180

Query: 181 SGFAI 186
           SG A+
Sbjct: 181 SGMAL 185

[Close]

BLAST of Cucsa.143320 vs. NCBI nr
Match: gi|747085808|ref|XP_011090380.1| (PREDICTED: protein slowmo homolog 1-like [Sesamum indicum])

HSP 1 Score: 340.1 bits (871), Expect = 2.4e-90
Identity = 159/185 (85.95%), Postives = 175/185 (94.59%), Query Frame = 1


Query: 1   MVKAYSQEYTYKHPWERVTCASWRKFADPENKRTLSHILEVDTLNRKVDAESGKLYTTRA 60
           MV+AYSQE+TYKHPWERVT ASWRKFADPENKRTLSHILEVDTL+ +++  SGKLYTTRA
Sbjct: 1   MVRAYSQEHTYKHPWERVTSASWRKFADPENKRTLSHILEVDTLSHRLEPSSGKLYTTRA 60

Query: 61  ITIHAPGPWFVRKIVGQDICHCVESTVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP 120
           ITIHAPGPWF+RKI+GQDICHCVESTVVDA+S+SMQL TRNISLQKF+EV EKIRYEPHP
Sbjct: 61  ITIHAPGPWFLRKIIGQDICHCVESTVVDAKSRSMQLATRNISLQKFVEVEEKIRYEPHP 120

Query: 121 ENPNGWTICKQETSIQIKPLSALASMAEKVEQRCAEKFVQNSAKGREVMERICKYLEAES 180
           ENPNGWTIC+QETSI+IKPLSALASMAEK+EQRC EKF  NSAKGREVMERICKYLEAES
Sbjct: 121 ENPNGWTICRQETSIRIKPLSALASMAEKIEQRCVEKFQHNSAKGREVMERICKYLEAES 180

Query: 181 SGFAI 186
            GF++
Sbjct: 181 RGFSV 185

The following BLAST results are available for this feature:

BLAST of Cucsa.143320 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SLMO_DICDI	6.3e-22	34.36	Protein slowmo homolog OS=Dictyostelium discoideum GN=slmo PE=3 SV=1	[more]
PLD3B_PIG	8.5e-19	33.33	PRELI domain containing protein 3B OS=Sus scrofa GN=PRELID3B PE=3 SV=1	[more]
UPS2_YEAST	1.1e-18	27.71	Protein UPS2, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S2...	[more]
PLD3B_MOUSE	1.4e-18	32.78	PRELI domain containing protein 3B OS=Mus musculus GN=Prelid3b PE=1 SV=2	[more]
PLD3A_HUMAN	4.2e-18	32.97	PRELI domain containing protein 3A OS=Homo sapiens GN=PRELID3A PE=1 SV=1	[more]

BLAST of Cucsa.143320 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LXA5_CUCSA	1.9e-102	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G613520 PE=4 SV=1	[more]
A0A0D2TL46_GOSRA	5.8e-91	87.57	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G072300 PE=4 SV=1	[more]
A0A061GTV2_THECC	7.5e-91	85.41	MSF1-like family protein isoform 1 OS=Theobroma cacao GN=TCM_040594 PE=4 SV=1	[more]
M5W0C5_PRUPE	3.7e-90	86.41	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012045mg PE=4 SV=1	[more]
W9RTE2_9ROSA	3.7e-90	86.49	Uncharacterized protein OS=Morus notabilis GN=L484_015260 PE=4 SV=1	[more]

BLAST of Cucsa.143320 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G13070.1	1.4e-88	81.77	MSF1-like family protein	[more]

BLAST of Cucsa.143320 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778663639\|ref\|XP_011660128.1\|	2.7e-102	100.00	PREDICTED: protein slowmo homolog [Cucumis sativus]	[more]
gi\|659099113\|ref\|XP_008450435.1\|	1.8e-101	98.92	PREDICTED: protein slowmo homolog [Cucumis melo]	[more]
gi\|823223791\|ref\|XP_012444646.1\|	8.3e-91	87.57	PREDICTED: protein slowmo homolog [Gossypium raimondii]	[more]
gi\|590583697\|ref\|XP_007014971.1\|	1.1e-90	85.41	MSF1-like family protein isoform 1 [Theobroma cacao]	[more]
gi\|747085808\|ref\|XP_011090380.1\|	2.4e-90	85.95	PREDICTED: protein slowmo homolog 1-like [Sesamum indicum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006797	PRELI/MSF1_dom
IPR006797	PRELI/MSF1_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005758	mitochondrial intermembrane space
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.143320.2	Cucsa.143320.2	mRNA
Cucsa.143320.1	Cucsa.143320.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006797	PRELI/MSF1 domain	PFAM	PF04707	PRELI	coord: 22..178 score: 2.4
IPR006797	PRELI/MSF1 domain	PROFILE	PS50904	PRELI_MSF1	coord: 2..181 score: 42
None	No IPR available	PANTHER	PTHR11158	MSF1/PX19 RELATED	coord: 2..185 score: 3.1
None	No IPR available	PANTHER	PTHR11158:SF17	PROTEIN SLOWMO HOMOLOG	coord: 2..185 score: 3.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.143320	Cla006296	Watermelon (97103) v1	cgywmB251
Cucsa.143320	Csa1G613520	Cucumber (Chinese Long) v2	cgycuB205
Cucsa.143320	MELO3C015200	Melon (DHL92) v3.5.1	cgymeB238
Cucsa.143320	ClCG03G013300	Watermelon (Charleston Gray)	cgywcgB242
Cucsa.143320	CSPI01G30300	Wild cucumber (PI 183967)	cgycpiB208
Cucsa.143320	CmaCh10G009350	Cucurbita maxima (Rimu)	cgycmaB0395
Cucsa.143320	CmaCh11G008410	Cucurbita maxima (Rimu)	cgycmaB0396
Cucsa.143320	CmoCh11G008520	Cucurbita moschata (Rifu)	cgycmoB0396
Cucsa.143320	CmoCh10G009800	Cucurbita moschata (Rifu)	cgycmoB0395
Cucsa.143320	Lsi06G005200	Bottle gourd (USVL1VR-Ls)	cgylsiB230
Cucsa.143320	Cp4.1LG18g01630	Cucurbita pepo (Zucchini)	cgycpeB0382
Cucsa.143320	Cp4.1LG04g12110	Cucurbita pepo (Zucchini)	cgycpeB0385
Cucsa.143320	MELO3C015200.2	Melon (DHL92) v3.6.1	cgymedB235
Cucsa.143320	CsaV3_1G042730	Cucumber (Chinese Long) v3	cgycucB213
Cucsa.143320	Cla97C03G063510	Watermelon (97103) v2	cgywmbB241
Cucsa.143320	Bhi02G001348	Wax gourd	cgywgoB281
Cucsa.143320	Carg17975	Silver-seed gourd	carcgyB0212
Cucsa.143320	Carg16947	Silver-seed gourd	carcgyB0539

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.143320	Melon (DHL92) v3.6.1	cgymedB234
Cucsa.143320	Silver-seed gourd	carcgyB0599
Cucsa.143320	Silver-seed gourd	carcgyB1039
Cucsa.143320	Cucumber (Chinese Long) v3	cgycucB216
Cucsa.143320	Wax gourd	cgywgoB277
Cucsa.143320	Wax gourd	cgywgoB278
Cucsa.143320	Wax gourd	cgywgoB282
Cucsa.143320	Cucurbita maxima (Rimu)	cgycmaB0397
Cucsa.143320	Cucurbita maxima (Rimu)	cgycmaB0398
Cucsa.143320	Cucurbita maxima (Rimu)	cgycmaB0399
Cucsa.143320	Cucurbita moschata (Rifu)	cgycmoB0397
Cucsa.143320	Cucurbita moschata (Rifu)	cgycmoB0398
Cucsa.143320	Cucurbita moschata (Rifu)	cgycmoB0399
Cucsa.143320	Wild cucumber (PI 183967)	cgycpiB211
Cucsa.143320	Cucumber (Chinese Long) v2	cgycuB208
Cucsa.143320	Melon (DHL92) v3.5.1	cgymeB237
Cucsa.143320	Melon (DHL92) v3.5.1	cgymeB239
Cucsa.143320	Cucurbita pepo (Zucchini)	cgycpeB0386
Cucsa.143320	Bottle gourd (USVL1VR-Ls)	cgylsiB228