CmaCh10G009350 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh10G009350
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Protein slowmo like 2
Location	Cma_Chr10 : 4694101 .. 4694658 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTAGAGCATACTCTCAGGAGTACACTTACAAGCACCCGTGGGAACGGGTCACTTGTGCATCTTGGCGTAAATTTACCGACCCCGAAAACAAGCGTACATTATCCCATATTCTTGAAGTTGACACCTTAAACAGAAAGGTTGACCCTGAATCCGGGAAGCTATATACAACCCGTGCTATTACCATCCATGCCCCTGGACCATGGTTTATCCGTAAGATCGTTGGTCAGGATATCTGCCACTGTGTCGAATCCACGGTTGTAGATGCTTGGTCGCAATCGATGCAACTCACCACTCGGAATATCAGTCTCCAGAAATTCATAGAAGTGGTGGAGAAAATCAGGTATGACCCTCACCCAGATAATCCGAACGGATGGACAATTTGCAGACAGGAGACTAGCATTCGAATCAAGCCATTGTCAGCACTCGCATCGATGGCTGAAAAAGTCGAGCAACGGTGCGCAGAGCGGTTTGTGCAGAACAGTGTCAAGGGTAGAGAAGTGATGGAGAGGATTTGTAAGTATCTTGAAGCTGAATCTAGCGGCCTCACAATCTAA

mRNA sequence

ATGGTTAGAGCATACTCTCAGGAGTACACTTACAAGCACCCGTGGGAACGGGTCACTTGTGCATCTTGGCGTAAATTTACCGACCCCGAAAACAAGCGTACATTATCCCATATTCTTGAAGTTGACACCTTAAACAGAAAGGTTGACCCTGAATCCGGGAAGCTATATACAACCCGTGCTATTACCATCCATGCCCCTGGACCATGGTTTATCCGTAAGATCGTTGGTCAGGATATCTGCCACTGTGTCGAATCCACGGTTGTAGATGCTTGGTCGCAATCGATGCAACTCACCACTCGGAATATCAGTCTCCAGAAATTCATAGAAGTGGTGGAGAAAATCAGGTATGACCCTCACCCAGATAATCCGAACGGATGGACAATTTGCAGACAGGAGACTAGCATTCGAATCAAGCCATTGTCAGCACTCGCATCGATGGCTGAAAAAGTCGAGCAACGGTGCGCAGAGCGGTTTGTGCAGAACAGTGTCAAGGGTAGAGAAGTGATGGAGAGGATTTGTAAGTATCTTGAAGCTGAATCTAGCGGCCTCACAATCTAA

Coding sequence (CDS)

ATGGTTAGAGCATACTCTCAGGAGTACACTTACAAGCACCCGTGGGAACGGGTCACTTGTGCATCTTGGCGTAAATTTACCGACCCCGAAAACAAGCGTACATTATCCCATATTCTTGAAGTTGACACCTTAAACAGAAAGGTTGACCCTGAATCCGGGAAGCTATATACAACCCGTGCTATTACCATCCATGCCCCTGGACCATGGTTTATCCGTAAGATCGTTGGTCAGGATATCTGCCACTGTGTCGAATCCACGGTTGTAGATGCTTGGTCGCAATCGATGCAACTCACCACTCGGAATATCAGTCTCCAGAAATTCATAGAAGTGGTGGAGAAAATCAGGTATGACCCTCACCCAGATAATCCGAACGGATGGACAATTTGCAGACAGGAGACTAGCATTCGAATCAAGCCATTGTCAGCACTCGCATCGATGGCTGAAAAAGTCGAGCAACGGTGCGCAGAGCGGTTTGTGCAGAACAGTGTCAAGGGTAGAGAAGTGATGGAGAGGATTTGTAAGTATCTTGAAGCTGAATCTAGCGGCCTCACAATCTAA

Protein sequence

MVRAYSQEYTYKHPWERVTCASWRKFTDPENKRTLSHILEVDTLNRKVDPESGKLYTTRAITIHAPGPWFIRKIVGQDICHCVESTVVDAWSQSMQLTTRNISLQKFIEVVEKIRYDPHPDNPNGWTICRQETSIRIKPLSALASMAEKVEQRCAERFVQNSVKGREVMERICKYLEAESSGLTI

Homology

[Close]

BLAST of CmaCh10G009350 vs. Swiss-Prot
Match: SLMO_DICDI (Protein slowmo homolog OS=Dictyostelium discoideum GN=slmo PE=3 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 5.6e-23
Identity = 58/163 (35.58%), Postives = 92/163 (56.44%), Query Frame = 1


Query: 8   EYTYKHPWERVTCASWRKFTDPENKRTLSHILEVDTLNRKVDPESGKLYTTRAITIHAPG 67
           ++TYKH W   + AS+RK+  PE       IL +D L++++DP +G L  T+ I      
Sbjct: 8   KHTYKHLWSDASTASFRKYPSPERP----DILSIDILSKEIDPTTGVLKCTKLIICKGNT 67

Query: 68  PWFIRKIVGQDICHCVESTVVDAWSQSMQLTTRNISLQKFIEVVEKIRYDPHPDNPNGWT 127
           P +++ I+G   C   E T VD  ++ M L T+N++    + V E   Y+ HPDN   WT
Sbjct: 68  PSWLKSILGSGECLFYEETTVDPKNKIMTLKTKNLNFTNILGVDEVCTYEQHPDNEE-WT 127

Query: 128 ICRQETSIRIKPLSALASMAEKVEQRCAERFVQNSVKGREVME 171
           +  QE ++     S++  +A K+E  C +RFV N+ KGR++ME
Sbjct: 128 LFTQEATVT----SSIFGVARKMEAFCLDRFVANAGKGRKIME 161

[Close]

BLAST of CmaCh10G009350 vs. Swiss-Prot
Match: PLD3B_MACFA (PRELI domain containing protein 3B OS=Macaca fascicularis GN=PRELID3B PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.0e-20
Identity = 61/185 (32.97%), Postives = 102/185 (55.14%), Query Frame = 1


Query: 2   VRAYSQEYTYKHPWERVTCASWRKFTDPENKRTLSHILEVDTLNRKVDPESGKLYTTRAI 61
           ++ ++ E+ + HPWE VT A+ +K+ +P N      ++ VD L+R +DP SGKL++ R +
Sbjct: 1   MKIWTSEHVFDHPWETVTTAAMQKYPNPMNPS----VVGVDVLDRHIDP-SGKLHSHRLL 60

Query: 62  TIHAPGPWFIRKIVG--QDICHCVESTVVDAWSQSMQLTTRNISLQKFIEVVEKIRYDPH 121
           +     P  ++ ++G  +   +  E +VVD   ++M+L + NIS    + V E++ Y PH
Sbjct: 61  STEWGLPSIVKSLIGAARTKTYVQEHSVVDPVEKTMELKSTNISFTNMVSVDERLIYKPH 120

Query: 122 PDNPNGWTICRQETSIRIKPLSALASMAEKVEQRCAERFVQNSVKGREVMERICKYLEAE 181
           P +P+  TI  QE  I +K +    S++  +E   A     N+ KGRE ME +   L AE
Sbjct: 121 PQDPDK-TILTQEAIITVKGV----SLSSYLEGLMASTISSNASKGREAMEWVIHKLNAE 175

Query: 182 SSGLT 185
              LT
Sbjct: 181 IEELT 175

[Close]

BLAST of CmaCh10G009350 vs. Swiss-Prot
Match: PLD3B_BOVIN (PRELI domain containing protein 3B OS=Bos taurus GN=PRELID3B PE=2 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 2.6e-20
Identity = 62/185 (33.51%), Postives = 100/185 (54.05%), Query Frame = 1


Query: 2   VRAYSQEYTYKHPWERVTCASWRKFTDPENKRTLSHILEVDTLNRKVDPESGKLYTTRAI 61
           ++ ++ E+ + HPWE VT A+ +K+ +P N      ++ VD L+R +DP SGKL++ R +
Sbjct: 1   MKIWTSEHVFDHPWETVTTAAMQKYPNPMNPS----VVGVDVLDRHIDP-SGKLHSHRLL 60

Query: 62  TIHAPGPWFIRKIVG--QDICHCVESTVVDAWSQSMQLTTRNISLQKFIEVVEKIRYDPH 121
           +     P  ++ I+G  +   +  E +VVD   ++M+L + NIS    + V E++ Y PH
Sbjct: 61  STEWGLPSIVKSIIGAARTKTYVQEHSVVDPVEKTMELKSTNISFTNMVSVDERLIYKPH 120

Query: 122 PDNPNGWTICRQETSIRIKPLSALASMAEKVEQRCAERFVQNSVKGREVMERICKYLEAE 181
           P +P   TI  QE  I +K +    S+   +E   A     N+ KGRE ME +   L AE
Sbjct: 121 PQDPEK-TILTQEAIITVKGV----SLGSYLEGLMASTISSNANKGREAMEWVIHKLNAE 175

Query: 182 SSGLT 185
              LT
Sbjct: 181 IEELT 175

[Close]

BLAST of CmaCh10G009350 vs. Swiss-Prot
Match: PLD3B_HUMAN (PRELI domain containing protein 3B OS=Homo sapiens GN=PRELID3B PE=2 SV=2)

HSP 1 Score: 99.8 bits (247), Expect = 3.4e-20
Identity = 60/185 (32.43%), Postives = 101/185 (54.59%), Query Frame = 1


Query: 2   VRAYSQEYTYKHPWERVTCASWRKFTDPENKRTLSHILEVDTLNRKVDPESGKLYTTRAI 61
           ++ ++ E+ + HPWE VT A+ +K+ +P N      ++ VD L+R +DP SGKL++ R +
Sbjct: 1   MKIWTSEHVFDHPWETVTTAAMQKYPNPMNPS----VVGVDVLDRHIDP-SGKLHSHRLL 60

Query: 62  TIHAPGPWFIRKIVG--QDICHCVESTVVDAWSQSMQLTTRNISLQKFIEVVEKIRYDPH 121
           +     P  ++ ++G  +   +  E +VVD   ++M+L + NIS    + V E++ Y PH
Sbjct: 61  STEWGLPSIVKSLIGAARTKTYVQEHSVVDPVEKTMELKSTNISFTNMVSVDERLIYKPH 120

Query: 122 PDNPNGWTICRQETSIRIKPLSALASMAEKVEQRCAERFVQNSVKGREVMERICKYLEAE 181
           P +P   T+  QE  I +K +    S++  +E   A     N+ KGRE ME +   L AE
Sbjct: 121 PQDPEK-TVLTQEAIITVKGV----SLSSYLEGLMASTISSNASKGREAMEWVIHKLNAE 175

Query: 182 SSGLT 185
              LT
Sbjct: 181 IEELT 175

[Close]

BLAST of CmaCh10G009350 vs. Swiss-Prot
Match: PLD3B_CRIGR (PRELI domain containing protein 3B OS=Cricetulus griseus GN=PRELID3B PE=2 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 7.6e-20
Identity = 60/184 (32.61%), Postives = 100/184 (54.35%), Query Frame = 1


Query: 2   VRAYSQEYTYKHPWERVTCASWRKFTDPENKRTLSHILEVDTLNRKVDPESGKLYTTRAI 61
           ++ ++ E+ + HPWE VT A+ +K+ +P N      ++ VD L+R VDP SGKL++ R +
Sbjct: 1   MKIWTSEHVFDHPWEMVTTAAMQKYPNPMNPS----VVGVDVLDRHVDP-SGKLHSHRLL 60

Query: 62  TIHAPGPWFIRKIVG--QDICHCVESTVVDAWSQSMQLTTRNISLQKFIEVVEKIRYDPH 121
           +     P  ++ ++G  +   +  E +VVD   ++M+L + NIS    + V E++ Y PH
Sbjct: 61  STEWGLPSIVKSLIGAARTKTYVQEHSVVDPVKKTMELKSTNISFTNMVSVDERLTYKPH 120

Query: 122 PDNPNGWTICRQETSIRIKPLSALASMAEKVEQRCAERFVQNSVKGREVMERICKYLEAE 181
           P +P   T+  QE  I +K +    S++  +E   A     N+ KGRE ME +   L AE
Sbjct: 121 PQDPEK-TVLTQEAIITVKGV----SLSSYLEGLMASTISSNANKGREAMEWVIHKLNAE 174

Query: 182 SSGL 184
              L
Sbjct: 181 IEDL 174

[Close]

BLAST of CmaCh10G009350 vs. TrEMBL
Match: A0A0A0LXA5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G613520 PE=4 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 2.4e-97
Identity = 172/185 (92.97%), Postives = 179/185 (96.76%), Query Frame = 1


Query: 1   MVRAYSQEYTYKHPWERVTCASWRKFTDPENKRTLSHILEVDTLNRKVDPESGKLYTTRA 60
           MV+AYSQEYTYKHPWERVTCASWRKF DPENKRTLSHILEVDTLNRKVD ESGKLYTTRA
Sbjct: 1   MVKAYSQEYTYKHPWERVTCASWRKFADPENKRTLSHILEVDTLNRKVDAESGKLYTTRA 60

Query: 61  ITIHAPGPWFIRKIVGQDICHCVESTVVDAWSQSMQLTTRNISLQKFIEVVEKIRYDPHP 120
           ITIHAPGPWF+RKIVGQDICHCVESTVVDA SQSMQLTTRNISLQKFIEVVEKIRY+PHP
Sbjct: 61  ITIHAPGPWFVRKIVGQDICHCVESTVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP 120

Query: 121 DNPNGWTICRQETSIRIKPLSALASMAEKVEQRCAERFVQNSVKGREVMERICKYLEAES 180
           +NPNGWTIC+QETSI+IKPLSALASMAEKVEQRCAE+FVQNS KGREVMERICKYLEAES
Sbjct: 121 ENPNGWTICKQETSIQIKPLSALASMAEKVEQRCAEKFVQNSAKGREVMERICKYLEAES 180

Query: 181 SGLTI 186
           SG  I
Sbjct: 181 SGFAI 185

[Close]

BLAST of CmaCh10G009350 vs. TrEMBL
Match: A0A0D2TL46_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G072300 PE=4 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 9.5e-94
Identity = 165/185 (89.19%), Postives = 176/185 (95.14%), Query Frame = 1


Query: 1   MVRAYSQEYTYKHPWERVTCASWRKFTDPENKRTLSHILEVDTLNRKVDPESGKLYTTRA 60
           MV+AY+QE+ YKHPWERVT ASWRKF DPENKRTLSHILEVDTLNRK+DP SGKLYTTRA
Sbjct: 1   MVKAYAQEHIYKHPWERVTSASWRKFADPENKRTLSHILEVDTLNRKLDPLSGKLYTTRA 60

Query: 61  ITIHAPGPWFIRKIVGQDICHCVESTVVDAWSQSMQLTTRNISLQKFIEVVEKIRYDPHP 120
           +TIHAPGPWF+RKIVGQDICHCVESTVVDA S+SMQL TRN+SLQKFIEV EKIRYDPHP
Sbjct: 61  LTIHAPGPWFVRKIVGQDICHCVESTVVDAQSKSMQLATRNVSLQKFIEVEEKIRYDPHP 120

Query: 121 DNPNGWTICRQETSIRIKPLSALASMAEKVEQRCAERFVQNSVKGREVMERICKYLEAES 180
           DNP GWTICRQETSIRIKPLSALASMAEKVEQRCAERF+QNSVKGREVMERICKYLEAES
Sbjct: 121 DNPTGWTICRQETSIRIKPLSALASMAEKVEQRCAERFMQNSVKGREVMERICKYLEAES 180

Query: 181 SGLTI 186
           SG+ +
Sbjct: 181 SGMAL 185

[Close]

BLAST of CmaCh10G009350 vs. TrEMBL
Match: A0A061GTV2_THECC (MSF1-like family protein isoform 1 OS=Theobroma cacao GN=TCM_040594 PE=4 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 6.1e-93
Identity = 161/185 (87.03%), Postives = 176/185 (95.14%), Query Frame = 1


Query: 1   MVRAYSQEYTYKHPWERVTCASWRKFTDPENKRTLSHILEVDTLNRKVDPESGKLYTTRA 60
           MV+ Y+Q++ YKHPWERVT ASWRKF DPENKRTLSHILEVDTLNR++DP+SG+LYTTRA
Sbjct: 1   MVKGYTQDHIYKHPWERVTSASWRKFADPENKRTLSHILEVDTLNRRLDPDSGRLYTTRA 60

Query: 61  ITIHAPGPWFIRKIVGQDICHCVESTVVDAWSQSMQLTTRNISLQKFIEVVEKIRYDPHP 120
           +TIHAPGPWFIRKI+GQDICHCVESTVVDA S+SMQLTTRN+SLQKFIEV EKIRYDPHP
Sbjct: 61  LTIHAPGPWFIRKIIGQDICHCVESTVVDAQSKSMQLTTRNVSLQKFIEVEEKIRYDPHP 120

Query: 121 DNPNGWTICRQETSIRIKPLSALASMAEKVEQRCAERFVQNSVKGREVMERICKYLEAES 180
           DNP GWTICRQETSIRIKPLSALASMAEKVEQRCAERF+QNS KGREVMERICKYLEAES
Sbjct: 121 DNPTGWTICRQETSIRIKPLSALASMAEKVEQRCAERFMQNSAKGREVMERICKYLEAES 180

Query: 181 SGLTI 186
           SG+ +
Sbjct: 181 SGMAL 185

[Close]

BLAST of CmaCh10G009350 vs. TrEMBL
Match: W9RTE2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_015260 PE=4 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 1.0e-92
Identity = 164/185 (88.65%), Postives = 174/185 (94.05%), Query Frame = 1


Query: 1   MVRAYSQEYTYKHPWERVTCASWRKFTDPENKRTLSHILEVDTLNRKVDPESGKLYTTRA 60
           MVRAY QEYTY+HPWERVT ASWRKF DPENKRTLSHILEVDTLN K+DP+SGKLYTTRA
Sbjct: 1   MVRAYRQEYTYRHPWERVTSASWRKFADPENKRTLSHILEVDTLNHKLDPDSGKLYTTRA 60

Query: 61  ITIHAPGPWFIRKIVGQDICHCVESTVVDAWSQSMQLTTRNISLQKFIEVVEKIRYDPHP 120
           ITIHAPGPWFI KIVGQDICHCVESTVVD  S+SMQLTTRNISLQKFIEV EKIRYDPHP
Sbjct: 61  ITIHAPGPWFIHKIVGQDICHCVESTVVDGQSRSMQLTTRNISLQKFIEVEEKIRYDPHP 120

Query: 121 DNPNGWTICRQETSIRIKPLSALASMAEKVEQRCAERFVQNSVKGREVMERICKYLEAES 180
           DNP+ W ICRQ+TSIRIKPLSALASMAEKVEQRCAE+FVQNS KGREVMERICKYLEAES
Sbjct: 121 DNPDKWAICRQQTSIRIKPLSALASMAEKVEQRCAEKFVQNSAKGREVMERICKYLEAES 180

Query: 181 SGLTI 186
           SG+++
Sbjct: 181 SGISL 185

[Close]

BLAST of CmaCh10G009350 vs. TrEMBL
Match: D7SL81_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g01810 PE=4 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 2.6e-91
Identity = 159/185 (85.95%), Postives = 175/185 (94.59%), Query Frame = 1


Query: 1   MVRAYSQEYTYKHPWERVTCASWRKFTDPENKRTLSHILEVDTLNRKVDPESGKLYTTRA 60
           MV+AY+QE+ YKHPWERVT ASWRKFTDPENKR LSHI+EVDTLNRK+D  SGKLYTTR 
Sbjct: 1   MVKAYTQEHVYKHPWERVTSASWRKFTDPENKRILSHIVEVDTLNRKLDSASGKLYTTRV 60

Query: 61  ITIHAPGPWFIRKIVGQDICHCVESTVVDAWSQSMQLTTRNISLQKFIEVVEKIRYDPHP 120
           IT+HAPGPWFIRKI+GQDICHCVEST+VDA S+SMQLTTRN SLQKF+EV EKIRY+PHP
Sbjct: 61  ITVHAPGPWFIRKIIGQDICHCVESTIVDAQSRSMQLTTRNSSLQKFVEVEEKIRYEPHP 120

Query: 121 DNPNGWTICRQETSIRIKPLSALASMAEKVEQRCAERFVQNSVKGREVMERICKYLEAES 180
           DNPNGWTIC+QETSIRIKPLSALASMAEKVEQRCAE+F+QNSVKGREVMERICKYLEAES
Sbjct: 121 DNPNGWTICQQETSIRIKPLSALASMAEKVEQRCAEKFLQNSVKGREVMERICKYLEAES 180

Query: 181 SGLTI 186
            G++I
Sbjct: 181 RGISI 185

[Close]

BLAST of CmaCh10G009350 vs. TAIR10
Match: AT5G13070.1 (AT5G13070.1 MSF1-like family protein)

HSP 1 Score: 322.0 bits (824), Expect = 2.4e-88
Identity = 147/181 (81.22%), Postives = 168/181 (92.82%), Query Frame = 1


Query: 1   MVRAYSQEYTYKHPWERVTCASWRKFTDPENKRTLSHILEVDTLNRKVDPESGKLYTTRA 60
           MV+AY QE+ YKHPWERV+ ASWRKF DPENKR LSHILEVDTLNRK+D E+GKL+TTRA
Sbjct: 1   MVKAYRQEHVYKHPWERVSAASWRKFADPENKRILSHILEVDTLNRKLDTETGKLHTTRA 60

Query: 61  ITIHAPGPWFIRKIVGQDICHCVESTVVDAWSQSMQLTTRNISLQKFIEVVEKIRYDPHP 120
           +TIHAPGPWF+ +I+GQDICHCVESTVVD  S+SMQLTT+NISL+KFIEV E+IRYDPHP
Sbjct: 61  LTIHAPGPWFLHRIIGQDICHCVESTVVDGKSRSMQLTTKNISLKKFIEVEERIRYDPHP 120

Query: 121 DNPNGWTICRQETSIRIKPLSALASMAEKVEQRCAERFVQNSVKGREVMERICKYLEAES 180
           DNP+ WT+C QETSIRIKPLSALASMAEKVEQ+CAE+F+QNS KGREVMERICKY+EAES
Sbjct: 121 DNPSAWTVCSQETSIRIKPLSALASMAEKVEQKCAEKFMQNSAKGREVMERICKYMEAES 180

Query: 181 S 182
           +
Sbjct: 181 A 181

[Close]

BLAST of CmaCh10G009350 vs. NCBI nr
Match: gi|659099113|ref|XP_008450435.1| (PREDICTED: protein slowmo homolog [Cucumis melo])

HSP 1 Score: 365.5 bits (937), Expect = 5.3e-98
Identity = 174/185 (94.05%), Postives = 179/185 (96.76%), Query Frame = 1


Query: 1   MVRAYSQEYTYKHPWERVTCASWRKFTDPENKRTLSHILEVDTLNRKVDPESGKLYTTRA 60
           MV+AYSQEYTYKHPWERVTCASWRKF DPENKRTLSHILEVDTLNRKVD ESGKLYTTRA
Sbjct: 1   MVKAYSQEYTYKHPWERVTCASWRKFADPENKRTLSHILEVDTLNRKVDAESGKLYTTRA 60

Query: 61  ITIHAPGPWFIRKIVGQDICHCVESTVVDAWSQSMQLTTRNISLQKFIEVVEKIRYDPHP 120
           ITIHAPGPWF+RKIVGQDICHCVESTVVDA SQSMQLTTRNISLQKFIEVVEKIRY+PHP
Sbjct: 61  ITIHAPGPWFVRKIVGQDICHCVESTVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP 120

Query: 121 DNPNGWTICRQETSIRIKPLSALASMAEKVEQRCAERFVQNSVKGREVMERICKYLEAES 180
           +NPNGWTIC+QETSIRIKPLSALASMAEKVEQRCAERFVQNS KGREVMERICKYLEAES
Sbjct: 121 ENPNGWTICKQETSIRIKPLSALASMAEKVEQRCAERFVQNSAKGREVMERICKYLEAES 180

Query: 181 SGLTI 186
           SG  I
Sbjct: 181 SGFAI 185

[Close]

BLAST of CmaCh10G009350 vs. NCBI nr
Match: gi|778663639|ref|XP_011660128.1| (PREDICTED: protein slowmo homolog [Cucumis sativus])

HSP 1 Score: 362.8 bits (930), Expect = 3.5e-97
Identity = 172/185 (92.97%), Postives = 179/185 (96.76%), Query Frame = 1


Query: 1   MVRAYSQEYTYKHPWERVTCASWRKFTDPENKRTLSHILEVDTLNRKVDPESGKLYTTRA 60
           MV+AYSQEYTYKHPWERVTCASWRKF DPENKRTLSHILEVDTLNRKVD ESGKLYTTRA
Sbjct: 1   MVKAYSQEYTYKHPWERVTCASWRKFADPENKRTLSHILEVDTLNRKVDAESGKLYTTRA 60

Query: 61  ITIHAPGPWFIRKIVGQDICHCVESTVVDAWSQSMQLTTRNISLQKFIEVVEKIRYDPHP 120
           ITIHAPGPWF+RKIVGQDICHCVESTVVDA SQSMQLTTRNISLQKFIEVVEKIRY+PHP
Sbjct: 61  ITIHAPGPWFVRKIVGQDICHCVESTVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP 120

Query: 121 DNPNGWTICRQETSIRIKPLSALASMAEKVEQRCAERFVQNSVKGREVMERICKYLEAES 180
           +NPNGWTIC+QETSI+IKPLSALASMAEKVEQRCAE+FVQNS KGREVMERICKYLEAES
Sbjct: 121 ENPNGWTICKQETSIQIKPLSALASMAEKVEQRCAEKFVQNSAKGREVMERICKYLEAES 180

Query: 181 SGLTI 186
           SG  I
Sbjct: 181 SGFAI 185

[Close]

BLAST of CmaCh10G009350 vs. NCBI nr
Match: gi|823223791|ref|XP_012444646.1| (PREDICTED: protein slowmo homolog [Gossypium raimondii])

HSP 1 Score: 350.9 bits (899), Expect = 1.4e-93
Identity = 165/185 (89.19%), Postives = 176/185 (95.14%), Query Frame = 1


Query: 1   MVRAYSQEYTYKHPWERVTCASWRKFTDPENKRTLSHILEVDTLNRKVDPESGKLYTTRA 60
           MV+AY+QE+ YKHPWERVT ASWRKF DPENKRTLSHILEVDTLNRK+DP SGKLYTTRA
Sbjct: 1   MVKAYAQEHIYKHPWERVTSASWRKFADPENKRTLSHILEVDTLNRKLDPLSGKLYTTRA 60

Query: 61  ITIHAPGPWFIRKIVGQDICHCVESTVVDAWSQSMQLTTRNISLQKFIEVVEKIRYDPHP 120
           +TIHAPGPWF+RKIVGQDICHCVESTVVDA S+SMQL TRN+SLQKFIEV EKIRYDPHP
Sbjct: 61  LTIHAPGPWFVRKIVGQDICHCVESTVVDAQSKSMQLATRNVSLQKFIEVEEKIRYDPHP 120

Query: 121 DNPNGWTICRQETSIRIKPLSALASMAEKVEQRCAERFVQNSVKGREVMERICKYLEAES 180
           DNP GWTICRQETSIRIKPLSALASMAEKVEQRCAERF+QNSVKGREVMERICKYLEAES
Sbjct: 121 DNPTGWTICRQETSIRIKPLSALASMAEKVEQRCAERFMQNSVKGREVMERICKYLEAES 180

Query: 181 SGLTI 186
           SG+ +
Sbjct: 181 SGMAL 185

[Close]

BLAST of CmaCh10G009350 vs. NCBI nr
Match: gi|590583697|ref|XP_007014971.1| (MSF1-like family protein isoform 1 [Theobroma cacao])

HSP 1 Score: 348.2 bits (892), Expect = 8.8e-93
Identity = 161/185 (87.03%), Postives = 176/185 (95.14%), Query Frame = 1


Query: 1   MVRAYSQEYTYKHPWERVTCASWRKFTDPENKRTLSHILEVDTLNRKVDPESGKLYTTRA 60
           MV+ Y+Q++ YKHPWERVT ASWRKF DPENKRTLSHILEVDTLNR++DP+SG+LYTTRA
Sbjct: 1   MVKGYTQDHIYKHPWERVTSASWRKFADPENKRTLSHILEVDTLNRRLDPDSGRLYTTRA 60

Query: 61  ITIHAPGPWFIRKIVGQDICHCVESTVVDAWSQSMQLTTRNISLQKFIEVVEKIRYDPHP 120
           +TIHAPGPWFIRKI+GQDICHCVESTVVDA S+SMQLTTRN+SLQKFIEV EKIRYDPHP
Sbjct: 61  LTIHAPGPWFIRKIIGQDICHCVESTVVDAQSKSMQLTTRNVSLQKFIEVEEKIRYDPHP 120

Query: 121 DNPNGWTICRQETSIRIKPLSALASMAEKVEQRCAERFVQNSVKGREVMERICKYLEAES 180
           DNP GWTICRQETSIRIKPLSALASMAEKVEQRCAERF+QNS KGREVMERICKYLEAES
Sbjct: 121 DNPTGWTICRQETSIRIKPLSALASMAEKVEQRCAERFMQNSAKGREVMERICKYLEAES 180

Query: 181 SGLTI 186
           SG+ +
Sbjct: 181 SGMAL 185

[Close]

BLAST of CmaCh10G009350 vs. NCBI nr
Match: gi|703121380|ref|XP_010102313.1| (hypothetical protein L484_015260 [Morus notabilis])

HSP 1 Score: 347.4 bits (890), Expect = 1.5e-92
Identity = 164/185 (88.65%), Postives = 174/185 (94.05%), Query Frame = 1


Query: 1   MVRAYSQEYTYKHPWERVTCASWRKFTDPENKRTLSHILEVDTLNRKVDPESGKLYTTRA 60
           MVRAY QEYTY+HPWERVT ASWRKF DPENKRTLSHILEVDTLN K+DP+SGKLYTTRA
Sbjct: 1   MVRAYRQEYTYRHPWERVTSASWRKFADPENKRTLSHILEVDTLNHKLDPDSGKLYTTRA 60

Query: 61  ITIHAPGPWFIRKIVGQDICHCVESTVVDAWSQSMQLTTRNISLQKFIEVVEKIRYDPHP 120
           ITIHAPGPWFI KIVGQDICHCVESTVVD  S+SMQLTTRNISLQKFIEV EKIRYDPHP
Sbjct: 61  ITIHAPGPWFIHKIVGQDICHCVESTVVDGQSRSMQLTTRNISLQKFIEVEEKIRYDPHP 120

Query: 121 DNPNGWTICRQETSIRIKPLSALASMAEKVEQRCAERFVQNSVKGREVMERICKYLEAES 180
           DNP+ W ICRQ+TSIRIKPLSALASMAEKVEQRCAE+FVQNS KGREVMERICKYLEAES
Sbjct: 121 DNPDKWAICRQQTSIRIKPLSALASMAEKVEQRCAEKFVQNSAKGREVMERICKYLEAES 180

Query: 181 SGLTI 186
           SG+++
Sbjct: 181 SGISL 185

The following BLAST results are available for this feature:

BLAST of CmaCh10G009350 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SLMO_DICDI	5.6e-23	35.58	Protein slowmo homolog OS=Dictyostelium discoideum GN=slmo PE=3 SV=1	[more]
PLD3B_MACFA	2.0e-20	32.97	PRELI domain containing protein 3B OS=Macaca fascicularis GN=PRELID3B PE=2 SV=1	[more]
PLD3B_BOVIN	2.6e-20	33.51	PRELI domain containing protein 3B OS=Bos taurus GN=PRELID3B PE=2 SV=1	[more]
PLD3B_HUMAN	3.4e-20	32.43	PRELI domain containing protein 3B OS=Homo sapiens GN=PRELID3B PE=2 SV=2	[more]
PLD3B_CRIGR	7.6e-20	32.61	PRELI domain containing protein 3B OS=Cricetulus griseus GN=PRELID3B PE=2 SV=1	[more]

BLAST of CmaCh10G009350 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LXA5_CUCSA	2.4e-97	92.97	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G613520 PE=4 SV=1	[more]
A0A0D2TL46_GOSRA	9.5e-94	89.19	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G072300 PE=4 SV=1	[more]
A0A061GTV2_THECC	6.1e-93	87.03	MSF1-like family protein isoform 1 OS=Theobroma cacao GN=TCM_040594 PE=4 SV=1	[more]
W9RTE2_9ROSA	1.0e-92	88.65	Uncharacterized protein OS=Morus notabilis GN=L484_015260 PE=4 SV=1	[more]
D7SL81_VITVI	2.6e-91	85.95	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g01810 PE=4 SV=...	[more]

BLAST of CmaCh10G009350 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G13070.1	2.4e-88	81.22	MSF1-like family protein	[more]

BLAST of CmaCh10G009350 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659099113\|ref\|XP_008450435.1\|	5.3e-98	94.05	PREDICTED: protein slowmo homolog [Cucumis melo]	[more]
gi\|778663639\|ref\|XP_011660128.1\|	3.5e-97	92.97	PREDICTED: protein slowmo homolog [Cucumis sativus]	[more]
gi\|823223791\|ref\|XP_012444646.1\|	1.4e-93	89.19	PREDICTED: protein slowmo homolog [Gossypium raimondii]	[more]
gi\|590583697\|ref\|XP_007014971.1\|	8.8e-93	87.03	MSF1-like family protein isoform 1 [Theobroma cacao]	[more]
gi\|703121380\|ref\|XP_010102313.1\|	1.5e-92	88.65	hypothetical protein L484_015260 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006797	PRELI/MSF1_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005758	mitochondrial intermembrane space
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh10G009350.1	CmaCh10G009350.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006797	PRELI/MSF1 domain	PFAM	PF04707	PRELI	coord: 18..178 score: 1.7
IPR006797	PRELI/MSF1 domain	PROFILE	PS50904	PRELI_MSF1	coord: 2..181 score: 42
None	No IPR available	PANTHER	PTHR11158	MSF1/PX19 RELATED	coord: 2..185 score: 4.7
None	No IPR available	PANTHER	PTHR11158:SF17	PROTEIN SLOWMO HOMOLOG	coord: 2..185 score: 4.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh10G009350	Cucsa.143320	Cucumber (Gy14) v1	cgycmaB0395
CmaCh10G009350	Cla006296	Watermelon (97103) v1	cmawmB046
CmaCh10G009350	Csa1G613520	Cucumber (Chinese Long) v2	cmacuB057
CmaCh10G009350	MELO3C015200	Melon (DHL92) v3.5.1	cmameB066
CmaCh10G009350	ClCG03G013300	Watermelon (Charleston Gray)	cmawcgB054
CmaCh10G009350	CSPI01G30300	Wild cucumber (PI 183967)	cmacpiB058
CmaCh10G009350	CmoCh11G008520	Cucurbita moschata (Rifu)	cmacmoB074
CmaCh10G009350	CmoCh10G009800	Cucurbita moschata (Rifu)	cmacmoB067
CmaCh10G009350	Lsi06G005200	Bottle gourd (USVL1VR-Ls)	cmalsiB073
CmaCh10G009350	Cp4.1LG18g01630	Cucurbita pepo (Zucchini)	cmacpeB080
CmaCh10G009350	Cp4.1LG04g12110	Cucurbita pepo (Zucchini)	cmacpeB086
CmaCh10G009350	MELO3C015200.2	Melon (DHL92) v3.6.1	cmamedB069
CmaCh10G009350	CsaV3_1G042730	Cucumber (Chinese Long) v3	cmacucB0066
CmaCh10G009350	Cla97C03G063510	Watermelon (97103) v2	cmawmbB060
CmaCh10G009350	Bhi02G001348	Wax gourd	cmawgoB0091
CmaCh10G009350	CsGy1G029660	Cucumber (Gy14) v2	cgybcmaB013
CmaCh10G009350	Carg16947	Silver-seed gourd	carcmaB0649
CmaCh10G009350	Carg17975	Silver-seed gourd	carcmaB0230

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh10G009350	CmaCh11G008410	Cucurbita maxima (Rimu)	cmacmaB078

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh10G009350	Wax gourd	cmawgoB0061
CmaCh10G009350	Wax gourd	cmawgoB0075
CmaCh10G009350	Wax gourd	cmawgoB0078
CmaCh10G009350	Cucurbita maxima (Rimu)	cmacmaB111
CmaCh10G009350	Cucurbita maxima (Rimu)	cmacmaB112
CmaCh10G009350	Cucurbita moschata (Rifu)	cmacmoB094
CmaCh10G009350	Melon (DHL92) v3.5.1	cmameB077
CmaCh10G009350	Watermelon (Charleston Gray)	cmawcgB052
CmaCh10G009350	Watermelon (97103) v1	cmawmB065
CmaCh10G009350	Cucurbita pepo (Zucchini)	cmacpeB098
CmaCh10G009350	Bottle gourd (USVL1VR-Ls)	cmalsiB046
CmaCh10G009350	Cucumber (Gy14) v2	cgybcmaB893
CmaCh10G009350	Melon (DHL92) v3.6.1	cmamedB082
CmaCh10G009350	Silver-seed gourd	carcmaB0726
CmaCh10G009350	Silver-seed gourd	carcmaB1258
CmaCh10G009350	Watermelon (97103) v2	cmawmbB059