Cucsa.140460 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.140460
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionGlutamate--tRNA ligase, chloroplastic/mitochondrial
Locationscaffold01071 : 381158 .. 386074 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTTGAGTTCTCAATCATGGCGGTTTCCCTTTTCACTCCCAGCATTTCTTCCTTCAACAACATTGCTCCACCTCCTCATTTCTCTCCGACGCCCTCCCATAACGCTTCGGATTTCAAATTCCGCCGCCGCAGCTACTGCCGTGTTCATCGAAAGACGGTATCATTTAGTTCTAGCCCTAGGCTACCAGTTTCGCTTCGTTTTCTTGTTTACGGCAGACGGAATTTGGCTAACTTCATTTGCTCGGCTGCTGATAAACCGGAAATCAGGTTCTTCTCTTACAATGGAACAACAATGGCTGATTATTTTAATGCTTTTATAAATTCTACAATAAGCACTTGACATTTGGTTGGATTTTGGTAGTTTCAGTTGATTTTCTTTTGCTCGTGTGATTGTGAGTTTGTGGAAATTAGGAGGGTCATGCCTGGCTTCTTGTCTAAATTTTGTATTTGTGTATTTCAGATTGAGTTTCTATGTTGGTAACTTTTTGTATTCTCATTGTCCTATACGTTATGAATTATGATCACAACTTCATTTGTAGGCACAAATCTGTAGATAGTTAAGCTGTTTGATTTGATCAACGCATAAAGGTTCCAAGTTCAGCCGGAAGGAACTATTTGTGAACTACTTAAACTAAAAATGTAACTACTACATTAAAAAATGCATTGGAAGTTTGAATGTTCAATTAGGAGAATAACTTGTCCTAGTCTTCTTTCTGGTTACCAACAACACTATTTACAACTTACAACCCCAATTGATAATCATTTAATTTTTTCGTTCAAGTTTTTTGGATAAGTTTCTCATTTTTCCTTTACAATTGTCATAGTCTATTAGTTTTCATCTTTTTCAAAGTAACATTTCAAGCGTTAGCCAAATTTAAAAACAAAAATTACATTTTAAAAATTAATTTTTTTTTCAAAACTTGAGGTGCATGATGAAACAAAGAACTCACGAGTGGAAATAGTGTTTATGAACTAAGTTTTCAAAAAATCTAGAACCAAAGACCTACCCCATTTGATAACAATTTCGTTTTTAGTTTTCTATTTTTGAAATTTATGCTTGTTCTCTCCGTTTCTTTATCATGATTTTCACCCTTCTTAAATAACCATTTAAATTCTTAGTCGAGCTTCAAAAACAAAAAATGGGGTTTCAAAAACTACTTTTTCCAATTTCCAAAACTTGACTAGGTTTTCTAATACATCTATAGAAAGCAAAGAGAAAAGAAAAGAAATGTTGGGAATAGTGTTTATAGACTTATTTTAAAAAACCAAATGGTTATCAAACGGAGCTGCCATTTTTTTGTTGTGTTTGTTTTTTTGAGGGAGTTGAGACTTGAGTGAGCCTGGTTGTGTTCTAACTTAGTCTCTTTTTTTCCATTGCGCTTGTTATTCAACCTGAAATATGACGTGTTGTACCTGTATATGCTTCGTTTAGTTCCACAGCCAAGATAAGAAGTGAAGTTCTGTCTCCATTTCGGTCTGTTCGGATGTTCTTTTATCTCACTTTCATTGCTAGTGGTACATTGGGAGGACTGATAGCAACCACTCAATTGCTTGGTGCATTGGCAAACTCATCAAGAGCTGACGAAGTCCCTGATATTCTAGAAGGACTTGGAGTAGATTTCGGAGCCGTAGCTCTTTTTGCTTTTCTTTATTTCAGAGAAAACAATGCAAAAAATGCTCAATTGGCTAGACTGTCAAGAGAAGAAAGCCTTTCCAACTTAAAGCTTCGAGTGGACCAAAACAAAGTTATTCCCATCAGCATTTTGCGTGGGATTGCTCGTCTGGTAATTTGTGCTGGCCCTGAATCCTTTATCATTGAAGCTTTTAAATCAAGTGAGCCTTTCACTGAACGACTTCTAGAACGGGGTGTTTTAGTCGTACCTCTTGCCACAGATGTCACTACACTGAATTTTGAGTTTGATGACCGTGAAGAGGTGAAGGATATAACCACAAAAAGGAAAAGACTGTGGCGCTTGACTCCAGTTTACATGACTGAGTGGTCAGCGTAAGTAATGATAATTAACATCTAAATTCACAATCATTCATTTTCTCCTTCCCTCATGTAATTTGCCTTTTCTTGTGAGCAATAGGTGGTTAGATGAACAAAAGAAGTTGGCTGGAGTCACCTCTGATTCTCCTGTGTAAGTTGTCCTTGTTAAACTTTGAAATATTCAAATTGATGAAGTAAAATGGTTGCCTTTCTAATCCTTGAACTGGCAATAATTTTTTGGTTTCAATACTACTTTGAGCCCAAACATTTGACTTTGGTTCATTTTGGTGGTTGTATTTTTAAAATGTTCATTTGGTTTTAACTAGTGACCATTTTGATCCTTCTATTCAAATGTTATCATAATTTGTATTCATAGTAGAACCATTGGCAAATACATGACTACTGACTAAACCATCATGGGTTGGCCTAGTGGTAAAAAAGAAGACACTAAGTCTCAATAACTAACCAAGAGCTACGTTATGACACCTAATTAAGAGGTCATGGGTTCAATTCATGGTGGTCACCTACCTAGGAATTAATTTCCTACGATGATACCCAAATGTTGTAGGATCAGGTGGATTGTACCGTGAGACTAGTCGAGGTTTGCATAAACTGGCCTTGACACTCACGAATATAGATATATAAATATGTAAAGATGTAAATATATAAATATGTAAATATGTAAATATAAATATATATATATGTAAATATGTAAATATGTAAATATAAATATATATATATGTGCATATATATATATAACTACTGACTACGTGTTAAGAAATTTAGTGAATGAACTGTTAAGAAGTGAAATGAAAATGAAGGGATCAAATAGTTATCCTTGTCTTATATAAGTATAGAGATCAACATGGATATTTTAAAAGTTCATGCACCAAAAGAAAAAAAATGTTGAAAGTACATGAACTGTAAAGAACCAAAATTGGAATTACAGGACCAAAGTAGTATTTAAGCCTAAACTTTTTCTTGTCTAATCTTCTAATGGAATAGATTGTTTCATTTCATTAATCATCTTTCATGAGTTATCTAATTTGGAGTCCCATAGTTGGTAATGTAAGTTGCACAGAAAAAAATGAAAGGGAAGGAAATGAACTTTTTTTGCCGAATCCATGCCAAAACTAGTTCACCGTACAGATATTAACTAATGGTTTTTCTTTCCTTTTTTCTTGCCCTCCGTAGCCTAGTTATGTTCATGTTTGTTCTTGCAGGTATCTATCTCTGCGAATGGATGGCCGTGTTCGTGGTAGTGGTGTTGGCTATCCTCCATGGAATGCTCTTGTAGCACAATTACCACCTGTAAAAGGACTATGGTCAGGTCTTCTAGATGGGATGGATGGGAGAGTTCTTTGAAGAAAAACAGCTCCTCCTCTTCCAAGTGAGTACTCTTCTTGAATCAATGTAGACACTCCGTTAATTATTTAACTCAATTTGCATGGATATGAAAATCTTAATAATTTAGCAAGAAAGATTATAACTTGATTCCTTCTAAAGAAGTACACAAAAATAGAAGAAAACAAGAAATGAAAAACCAATCATATTTTTCTATCCATTTGATTCTACCATTTGTATTTAATATTGTGTTATTCCTTGCAATGAAGGTAGTCTTATACACCTGAAAAATTATGCAGTAATCGAATCGATTCTGCTTAGGAGAGTTTCCAGTTTTAATTGAAGTTTAGAGTTCTAAGTGATACAAATAACATCTCCAAAGTTCAGAGCTTTTATTTCCCTATTTATTTGGAACTATTAGACGTGCTTTCTGTGGTTGGAAATCTTCCATTTTAATGATTGAGATGAACTTAAAATCTCATCTGTGATCTCCTTTTGAGCTGTCATCAAAACTCCCATATCTAATTCAAGTCCTATTTGTTTCAACTTTCAAGGAACTACAGAATCTCTTACCAATATTTTTTATATATGTAGACAGAATCCACTTTTTAAGAAATAAGGTCAATAATGTTGTCACTTCAGTAATTTTTGCTTTTTTTTTTTTTTTATGTATGCAAACTTAATGTCAAACTATACCGCAGAATCATAATTATGTAATTCATCTGTTGCCAAATTTCTTACCAAATACAGGAACATTGCGGCCTGACATAGTATCAATTTTTTTTGTTGTTTCTATTTTTAAAATTTATGCTACATACAATTTTCTTGCCATGGTTTTGACGTTTATTGAAAAAACTTAAGTTTATAGTCAAATTCTAAAATGAAAAACCAGTTTTATTTTTTTTTCTTTTCAAAATTTTCCTTGGTTACTAAGTTTTTTAAATCTTTTTTTTTTATAAAAAATTTACCATGGTTTCTGAAACTATCAGTAGAACAAAGATAACAAAACATATAAATTTTTGGGTGGAACTTAGAAGTAGTGTTTATAAGCTTTATTTGGATTCCCATTTGATAATCATTTAGTTTTTGGTCATTAATACAAAACTTATATTTCTTTCACCCATAAGTTTTGATGTTTTGTTATCCACATATCACTAGTATTCTAAAAGACAAAGTCAAAGTTTTAAAAGCTAAAAAAAAGTAAGTTTTTGTAATTTGATTTAGAATTCAAGTATTTCTTTAACAAAAGTGAAAACTATAATAAAAAAATTGGGAAGAAACAAACATATTTCAAAACAGAAAACTGAAATATAGATTGTTATCAACAGAGACCTAAATTGTTAGTTATCTACGTGATCTATATTAATCTAATCTTTGTTTTCAACCTCATTCTTTAACAGGTACTCTGAAATTAAGTCCTTAACATGGAGTGGACTAAAGTTTGGGTACCATCTTTAAACTATCAAAGAAACTTCCACTTCAAAAGCTCTAACACCATTGTTAAGCTGGACTGCCTGAGAAAAATACAGGTTTTTGTAAAGAGTTAAAAGGAGAGATTTTGCTTATCCATCATAAATCTGATT

mRNA sequence

TCTTGAGTTCTCAATCATGGCGGTTTCCCTTTTCACTCCCAGCATTTCTTCCTTCAACAACATTGCTCCACCTCCTCATTTCTCTCCGACGCCCTCCCATAACGCTTCGGATTTCAAATTCCGCCGCCGCAGCTACTGCCGTGTTCATCGAAAGACGGTATCATTTAGTTCTAGCCCTAGGCTACCAGTTTCGCTTCGTTTTCTTGTTTACGGCAGACGGAATTTGGCTAACTTCATTTGCTCGGCTGCTGATAAACCGGAAATCAGTTCCACAGCCAAGATAAGAAGTGAAGTTCTGTCTCCATTTCGGTCTGTTCGGATGTTCTTTTATCTCACTTTCATTGCTAGTGGTACATTGGGAGGACTGATAGCAACCACTCAATTGCTTGGTGCATTGGCAAACTCATCAAGAGCTGACGAAGTCCCTGATATTCTAGAAGGACTTGGAGTAGATTTCGGAGCCGTAGCTCTTTTTGCTTTTCTTTATTTCAGAGAAAACAATGCAAAAAATGCTCAATTGGCTAGACTGTCAAGAGAAGAAAGCCTTTCCAACTTAAAGCTTCGAGTGGACCAAAACAAAGTTATTCCCATCAGCATTTTGCGTGGGATTGCTCGTCTGGTAATTTGTGCTGGCCCTGAATCCTTTATCATTGAAGCTTTTAAATCAAGTGAGCCTTTCACTGAACGACTTCTAGAACGGGGTGTTTTAGTCGTACCTCTTGCCACAGATGTCACTACACTGAATTTTGAGTTTGATGACCGTGAAGAGGTGAAGGATATAACCACAAAAAGGAAAAGACTGTGGCGCTTGACTCCAGTTTACATGACTGAGTGGTCAGCGTGGTTAGATGAACAAAAGAAGTTGGCTGGAGTCACCTCTGATTCTCCTGTGTATCTATCTCTGCGAATGGATGGCCGTGTTCGTGGTAGTGGTGTTGGCTATCCTCCATGGAATGCTCTTGTAGCACAATTACCACCTGTAAAAGGACTATGGTCAGGTCTTCTAGATGGGATGGATGGGAGAGTTCTTTGAAGAAAAACAGCTCCTCCTCTTCCAAGTACTCTGAAATTAAGTCCTTAACATGGAGTGGACTAAAGTTTGGGTACCATCTTTAAACTATCAAAGAAACTTCCACTTCAAAAGCTCTAACACCATTGTTAAGCTGGACTGCCTGAGAAAAATACAGGTTTTTGTAAAGAGTTAAAAGGAGAGATTTTGCTTATCCATCATAAATCTGATT

Coding sequence (CDS)

ATGGCGGTTTCCCTTTTCACTCCCAGCATTTCTTCCTTCAACAACATTGCTCCACCTCCTCATTTCTCTCCGACGCCCTCCCATAACGCTTCGGATTTCAAATTCCGCCGCCGCAGCTACTGCCGTGTTCATCGAAAGACGGTATCATTTAGTTCTAGCCCTAGGCTACCAGTTTCGCTTCGTTTTCTTGTTTACGGCAGACGGAATTTGGCTAACTTCATTTGCTCGGCTGCTGATAAACCGGAAATCAGTTCCACAGCCAAGATAAGAAGTGAAGTTCTGTCTCCATTTCGGTCTGTTCGGATGTTCTTTTATCTCACTTTCATTGCTAGTGGTACATTGGGAGGACTGATAGCAACCACTCAATTGCTTGGTGCATTGGCAAACTCATCAAGAGCTGACGAAGTCCCTGATATTCTAGAAGGACTTGGAGTAGATTTCGGAGCCGTAGCTCTTTTTGCTTTTCTTTATTTCAGAGAAAACAATGCAAAAAATGCTCAATTGGCTAGACTGTCAAGAGAAGAAAGCCTTTCCAACTTAAAGCTTCGAGTGGACCAAAACAAAGTTATTCCCATCAGCATTTTGCGTGGGATTGCTCGTCTGGTAATTTGTGCTGGCCCTGAATCCTTTATCATTGAAGCTTTTAAATCAAGTGAGCCTTTCACTGAACGACTTCTAGAACGGGGTGTTTTAGTCGTACCTCTTGCCACAGATGTCACTACACTGAATTTTGAGTTTGATGACCGTGAAGAGGTGAAGGATATAACCACAAAAAGGAAAAGACTGTGGCGCTTGACTCCAGTTTACATGACTGAGTGGTCAGCGTGGTTAGATGAACAAAAGAAGTTGGCTGGAGTCACCTCTGATTCTCCTGTGTATCTATCTCTGCGAATGGATGGCCGTGTTCGTGGTAGTGGTGTTGGCTATCCTCCATGGAATGCTCTTGTAGCACAATTACCACCTGTAAAAGGACTATGGTCAGGTCTTCTAGATGGGATGGATGGGAGAGTTCTTTGA

Protein sequence

MAVSLFTPSISSFNNIAPPPHFSPTPSHNASDFKFRRRSYCRVHRKTVSFSSSPRLPVSLRFLVYGRRNLANFICSAADKPEISSTAKIRSEVLSPFRSVRMFFYLTFIASGTLGGLIATTQLLGALANSSRADEVPDILEGLGVDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISILRGIARLVICAGPESFIIEAFKSSEPFTERLLERGVLVVPLATDVTTLNFEFDDREEVKDITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSPVYLSLRMDGRVRGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL*
Homology
[Close]
BLAST of Cucsa.140460 vs. Swiss-Prot
Match: LPA1_ARATH (Protein LOW PSII ACCUMULATION 1, chloroplastic OS=Arabidopsis thaliana GN=LPA1 PE=1 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 2.3e-30
Identity = 85/268 (31.72%), Postives = 134/268 (50.00%), Query Frame = 1 

Query: 88  KIRSEVLSPFRSVRMFFYLTFIASGTLGGLIATTQLLGALANSSRADEVPDILEGLG--- 147
           K+ SEV +PFR VR FFY  F A+  +       +L+ A+      D  P++LE  G   
Sbjct: 187 KLISEVRAPFRGVRKFFYFAFAAAAGISMFFTVPRLVQAIRG---GDGAPNLLETTGNAA 246

Query: 148 VDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISILRGIARLVIC 207
           ++ G + +   L+  EN  +  Q+ +++R+E+LS L LR+  N+V+ +  LR   R VI 
Sbjct: 247 INIGGIVVMVSLFLWENKKEEEQMVQITRDETLSRLPLRLSTNRVVELVQLRDTVRPVIL 306

Query: 208 AGPESFIIEAFKSSEPFTERLLERGVLVVPL---------------------ATDVTTLN 267
           AG +  +  A + ++ F   LL RGVL+VP+                     AT + ++ 
Sbjct: 307 AGKKETVTLAMQKADRFRTELLRRGVLLVPVVWGERKTPEIEKKGFGASSKAATSLPSIG 366

Query: 268 FEFDDREE--VKDITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSPVYLSLRMDGR 327
            +FD R +  V     K +  ++   V   EW  W+ +Q+   GV     VY+ LR+DGR
Sbjct: 367 EDFDTRAQSVVAQSKLKGEIRFKAETVSPGEWERWIRDQQISEGVNPGDDVYIILRLDGR 426

Query: 328 VRGSGVGYPPWNALVAQLPPVKGLWSGL 330
           VR SG G P W  +  +LPP+  + S L
Sbjct: 427 VRRSGRGMPDWAEISKELPPMDDVLSKL 451

[Close]
BLAST of Cucsa.140460 vs. TrEMBL
Match: A0A0A0L902_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G621430 PE=4 SV=1)

HSP 1 Score: 668.3 bits (1723), Expect = 4.9e-189
Identity = 338/338 (100.00%), Postives = 338/338 (100.00%), Query Frame = 1 

Query: 1   MAVSLFTPSISSFNNIAPPPHFSPTPSHNASDFKFRRRSYCRVHRKTVSFSSSPRLPVSL 60
           MAVSLFTPSISSFNNIAPPPHFSPTPSHNASDFKFRRRSYCRVHRKTVSFSSSPRLPVSL
Sbjct: 1   MAVSLFTPSISSFNNIAPPPHFSPTPSHNASDFKFRRRSYCRVHRKTVSFSSSPRLPVSL 60

Query: 61  RFLVYGRRNLANFICSAADKPEISSTAKIRSEVLSPFRSVRMFFYLTFIASGTLGGLIAT 120
           RFLVYGRRNLANFICSAADKPEISSTAKIRSEVLSPFRSVRMFFYLTFIASGTLGGLIAT
Sbjct: 61  RFLVYGRRNLANFICSAADKPEISSTAKIRSEVLSPFRSVRMFFYLTFIASGTLGGLIAT 120

Query: 121 TQLLGALANSSRADEVPDILEGLGVDFGAVALFAFLYFRENNAKNAQLARLSREESLSNL 180
           TQLLGALANSSRADEVPDILEGLGVDFGAVALFAFLYFRENNAKNAQLARLSREESLSNL
Sbjct: 121 TQLLGALANSSRADEVPDILEGLGVDFGAVALFAFLYFRENNAKNAQLARLSREESLSNL 180

Query: 181 KLRVDQNKVIPISILRGIARLVICAGPESFIIEAFKSSEPFTERLLERGVLVVPLATDVT 240
           KLRVDQNKVIPISILRGIARLVICAGPESFIIEAFKSSEPFTERLLERGVLVVPLATDVT
Sbjct: 181 KLRVDQNKVIPISILRGIARLVICAGPESFIIEAFKSSEPFTERLLERGVLVVPLATDVT 240

Query: 241 TLNFEFDDREEVKDITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSPVYLSLRMDG 300
           TLNFEFDDREEVKDITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSPVYLSLRMDG
Sbjct: 241 TLNFEFDDREEVKDITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSPVYLSLRMDG 300

Query: 301 RVRGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL 339
           RVRGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
Sbjct: 301 RVRGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL 338

[Close]
BLAST of Cucsa.140460 vs. TrEMBL
Match: A0A061DQ88_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_003773 PE=4 SV=1)

HSP 1 Score: 429.5 bits (1103), Expect = 3.8e-117
Identity = 214/285 (75.09%), Postives = 246/285 (86.32%), Query Frame = 1 

Query: 58  VSLRFLVYGRRNLANFICSAADKP----EISSTAKIRSEVLSPFRSVRMFFYLTFIASGT 117
           + L+F        ++ +CSAA+KP    EISS AKIRSEVLSPFRSVRMFFYL FIASG 
Sbjct: 60  IDLKFHAKPSSVSSSVVCSAANKPSSSSEISSAAKIRSEVLSPFRSVRMFFYLAFIASGA 119

Query: 118 LGGLIATTQLLGALANSSRADEVPDILEGLGVDFGAVALFAFLYFRENNAKNAQLARLSR 177
           LGGLIA TQL+ AL N +R+ EVPD+L  LG+D  AV++FAFLYFREN AKNAQ+ARLSR
Sbjct: 120 LGGLIAFTQLIAALTNPARSSEVPDLLTSLGIDVAAVSIFAFLYFRENTAKNAQIARLSR 179

Query: 178 EESLSNLKLRVDQNKVIPISILRGIARLVICAGPESFIIEAFKSSEPFTERLLERGVLVV 237
           EESLSNLKLRVDQNK+I +S LRGIARLVICAGP SFI+E+FKSSEPFTE LL+RGVLV+
Sbjct: 180 EESLSNLKLRVDQNKIISVSSLRGIARLVICAGPASFILESFKSSEPFTEGLLQRGVLVI 239

Query: 238 PLATDVTTLNFEFDDREEVKDITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSPVY 297
           P ATD  +L+ +FDD E++K+ITTKRKRLW+LTPVY++EWS WLDEQKKLAGV+ +SPVY
Sbjct: 240 PFATDGNSLSLDFDDSEDMKEITTKRKRLWQLTPVYVSEWSEWLDEQKKLAGVSPESPVY 299

Query: 298 LSLRMDGRVRGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL 339
           LSLR+DGRVRGSGVGYPPWNA VAQLPPVKGLWSGLLDGMDGRVL
Sbjct: 300 LSLRLDGRVRGSGVGYPPWNAFVAQLPPVKGLWSGLLDGMDGRVL 344

[Close]
BLAST of Cucsa.140460 vs. TrEMBL
Match: A0A0D2Q2X4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G235900 PE=4 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 9.5e-116
Identity = 208/272 (76.47%), Postives = 244/272 (89.71%), Query Frame = 1 

Query: 71  ANFICSAADKP----EISSTAKIRSEVLSPFRSVRMFFYLTFIASGTLGGLIATTQLLGA 130
           ++ +CSAA+KP    ++SS AKIRSEVLSPFRSVRMFFYLTFIASG+LGGLIATTQL+ +
Sbjct: 55  SSIVCSAANKPSSSSQVSSAAKIRSEVLSPFRSVRMFFYLTFIASGSLGGLIATTQLISS 114

Query: 131 LANSSRADEVPDILEGLGVDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQ 190
           L N +R+ EVPDIL GLG+D GAV++FAFLYFREN AKNAQLARLSREESLSNLKLRV+Q
Sbjct: 115 LTNPARSSEVPDILTGLGIDIGAVSIFAFLYFRENTAKNAQLARLSREESLSNLKLRVNQ 174

Query: 191 NKVIPISILRGIARLVICAGPESFIIEAFKSSEPFTERLLERGVLVVPLATDVTTLNFEF 250
           NK+I +S LRGIARLVIC+GP SFI+E+FK SEPFTE LLERGVLVVP ATD  + + +F
Sbjct: 175 NKIISVSSLRGIARLVICSGPASFILESFKLSEPFTESLLERGVLVVPFATDGNSPSLDF 234

Query: 251 DDREEVKDITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSPVYLSLRMDGRVRGSG 310
           D+ E++K+IT KRKRLW+L PVY++EW+ WLDEQKKLAG++ +SPVYLSLR+DGRVRGSG
Sbjct: 235 DESEDMKEITEKRKRLWQLAPVYVSEWTEWLDEQKKLAGISPESPVYLSLRLDGRVRGSG 294

Query: 311 VGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL 339
           VG+PPWNALVAQLPPVKGLWSGLLDGMDGRVL
Sbjct: 295 VGFPPWNALVAQLPPVKGLWSGLLDGMDGRVL 326

[Close]
BLAST of Cucsa.140460 vs. TrEMBL
Match: A0A068U5J6_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00016315001 PE=4 SV=1)

HSP 1 Score: 421.4 bits (1082), Expect = 1.0e-114
Identity = 205/264 (77.65%), Postives = 236/264 (89.39%), Query Frame = 1 

Query: 75  CSAADKPEISSTAKIRSEVLSPFRSVRMFFYLTFIASGTLGGLIATTQLLGALANSSRAD 134
           C A++KPEISSTAKIRSEVLSPFRSVRMFFYL F+ASG LGGLIATTQL+ AL+N SRA 
Sbjct: 63  CFASNKPEISSTAKIRSEVLSPFRSVRMFFYLAFVASGALGGLIATTQLIAALSNPSRAT 122

Query: 135 EVPDILEGLGVDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISI 194
           EVPDIL+GLG+D GAV++FA LY+REN AKNAQLA+LSREESLSNL++RVD+ +++P+S 
Sbjct: 123 EVPDILKGLGIDIGAVSVFALLYYRENTAKNAQLAKLSREESLSNLRIRVDEKRILPVSA 182

Query: 195 LRGIARLVICAGPESFIIEAFKSSEPFTERLLERGVLVVPLATDVTTLNFEFDDREEVKD 254
            RGIARLVI AGP SFI ++FKSSEPFT+RL+ERGVLVVP ATD  + +FEF+D EE+K+
Sbjct: 183 FRGIARLVILAGPASFIADSFKSSEPFTDRLVERGVLVVPFATDGNSPSFEFEDSEELKE 242

Query: 255 ITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSPVYLSLRMDGRVRGSGVGYPPWNA 314
           I  KRKRLW+L PVY TEWS WL EQKKLAGV+ +SPVYLSLRMDGRVRGSGVGYPPWNA
Sbjct: 243 IIAKRKRLWQLAPVYATEWSEWLAEQKKLAGVSPESPVYLSLRMDGRVRGSGVGYPPWNA 302

Query: 315 LVAQLPPVKGLWSGLLDGMDGRVL 339
            VAQLPPVKG+WSGLLDGMDGRVL
Sbjct: 303 FVAQLPPVKGMWSGLLDGMDGRVL 326

[Close]
BLAST of Cucsa.140460 vs. TrEMBL
Match: A0A0S3SRM6_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G222800 PE=4 SV=1)

HSP 1 Score: 420.2 bits (1079), Expect = 2.3e-114
Identity = 209/270 (77.41%), Postives = 236/270 (87.41%), Query Frame = 1 

Query: 69  NLANFICSAADKPEISSTAKIRSEVLSPFRSVRMFFYLTFIASGTLGGLIATTQLLGALA 128
           + A  +CSAA+KP+ISSTAKIRSEVLSPFRSVRMFFY+ F+ASG+LG  IA TQL+GALA
Sbjct: 58  SFATLVCSAANKPDISSTAKIRSEVLSPFRSVRMFFYIAFVASGSLGAFIAITQLIGALA 117

Query: 129 NSSRADEVPDILEGLGVDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNK 188
           NSSRA EVP+IL+GL +D  AV+LFAFLYFREN AKNAQ+ARLSREESLSNLKLRVD+ K
Sbjct: 118 NSSRATEVPEILKGLAIDIAAVSLFAFLYFRENKAKNAQVARLSREESLSNLKLRVDEKK 177

Query: 189 VIPISILRGIARLVICAGPESFIIEAFKSSEPFTERLLERGVLVVPLATDVTTLNFEFDD 248
           +IP++ LRGIARLVICAGP SF+ E+FK SEPFTE LL+RGVLVVPL TD  +  FEF  
Sbjct: 178 IIPMNSLRGIARLVICAGPASFVTESFKRSEPFTESLLDRGVLVVPLVTDGNSPAFEF-- 237

Query: 249 REEVKDITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSPVYLSLRMDGRVRGSGVG 308
            EE  D+ T+RKRLW+L PVY+ EWS WLDEQKKLAGV SDSPVYLSLRMDGRVRGSGVG
Sbjct: 238 -EETGDLATRRKRLWQLAPVYINEWSEWLDEQKKLAGVPSDSPVYLSLRMDGRVRGSGVG 297

Query: 309 YPPWNALVAQLPPVKGLWSGLLDGMDGRVL 339
           YPPWNALVAQLP VKG+W+GLLDGMDGRVL
Sbjct: 298 YPPWNALVAQLPSVKGMWTGLLDGMDGRVL 324

[Close]
BLAST of Cucsa.140460 vs. TAIR10
Match: AT4G28740.1 (AT4G28740.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 365.2 bits (936), Expect = 4.5e-101
Identity = 194/322 (60.25%), Postives = 248/322 (77.02%), Query Frame = 1 

Query: 21  HFSPTPSHNASDFKFRRRSYCRVHRKTVSFSS-SPRLPVSLRFLVYGRRNLA-NFICSAA 80
           H S    + A +    RR     HR+ + FS  + RL ++ +     ++ L+ N +C AA
Sbjct: 31  HISKQALYQAKESYSHRRISRHNHRERLDFSHRNHRLTITRK-----QQPLSFNTVCFAA 90

Query: 81  DKP-EISSTAKIRSEVLSPFRSVRMFFYLTFIASGTLGGLIATTQLLGALANSSRADEVP 140
           D+P EIS+ A+IRSEVLSPFRSVRMFFYL FIASG+LGGLIAT++L+GALAN +R+ EV 
Sbjct: 91  DEPSEISADARIRSEVLSPFRSVRMFFYLAFIASGSLGGLIATSRLIGALANPARSGEVL 150

Query: 141 DILEGLGVDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQ-NKVIPISILR 200
           +I++GLGVD GA +LFAFLYF EN  KNAQ+ARLSREE+L  LK+RV++ NKVI +  LR
Sbjct: 151 EIVKGLGVDIGAASLFAFLYFNENKTKNAQMARLSREENLGKLKMRVEENNKVISVGDLR 210

Query: 201 GIARLVICAGPESFIIEAFKSSEPFTERLLERGVLVVPLATDVTTLNFEFDDREEV-KDI 260
           G+ARLVICAGP  FI EAFK S+ +T+ L+ERGV+VV  ATD  +   EFD+ +   +++
Sbjct: 211 GVARLVICAGPAEFIEEAFKRSKEYTQGLVERGVVVVAYATDGNSPVLEFDETDIADEEM 270

Query: 261 TTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSPVYLSLRMDGRVRGSGVGYPPWNAL 320
           + +RK+LWR+TPV++ EW  WL+EQKKLA V+SDSPVYLSLR+DGRVR SGVGYPPW A 
Sbjct: 271 SQRRKKLWRVTPVFVPEWEKWLNEQKKLANVSSDSPVYLSLRLDGRVRASGVGYPPWQAF 330

Query: 321 VAQLPPVKGLWSGLLDGMDGRV 338
           VAQLPPVKG+W+GLLDGMDGRV
Sbjct: 331 VAQLPPVKGMWTGLLDGMDGRV 347

[Close]
BLAST of Cucsa.140460 vs. TAIR10
Match: AT1G02910.1 (AT1G02910.1 tetratricopeptide repeat (TPR)-containing protein)

HSP 1 Score: 134.4 bits (337), Expect = 1.3e-31
Identity = 85/268 (31.72%), Postives = 134/268 (50.00%), Query Frame = 1 

Query: 88  KIRSEVLSPFRSVRMFFYLTFIASGTLGGLIATTQLLGALANSSRADEVPDILEGLG--- 147
           K+ SEV +PFR VR FFY  F A+  +       +L+ A+      D  P++LE  G   
Sbjct: 187 KLISEVRAPFRGVRKFFYFAFAAAAGISMFFTVPRLVQAIRG---GDGAPNLLETTGNAA 246

Query: 148 VDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISILRGIARLVIC 207
           ++ G + +   L+  EN  +  Q+ +++R+E+LS L LR+  N+V+ +  LR   R VI 
Sbjct: 247 INIGGIVVMVSLFLWENKKEEEQMVQITRDETLSRLPLRLSTNRVVELVQLRDTVRPVIL 306

Query: 208 AGPESFIIEAFKSSEPFTERLLERGVLVVPL---------------------ATDVTTLN 267
           AG +  +  A + ++ F   LL RGVL+VP+                     AT + ++ 
Sbjct: 307 AGKKETVTLAMQKADRFRTELLRRGVLLVPVVWGERKTPEIEKKGFGASSKAATSLPSIG 366

Query: 268 FEFDDREE--VKDITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSPVYLSLRMDGR 327
            +FD R +  V     K +  ++   V   EW  W+ +Q+   GV     VY+ LR+DGR
Sbjct: 367 EDFDTRAQSVVAQSKLKGEIRFKAETVSPGEWERWIRDQQISEGVNPGDDVYIILRLDGR 426

Query: 328 VRGSGVGYPPWNALVAQLPPVKGLWSGL 330
           VR SG G P W  +  +LPP+  + S L
Sbjct: 427 VRRSGRGMPDWAEISKELPPMDDVLSKL 451

[Close]
BLAST of Cucsa.140460 vs. NCBI nr
Match: gi|449468602|ref|XP_004152010.1| (PREDICTED: protein LOW PSII ACCUMULATION 1, chloroplastic [Cucumis sativus])

HSP 1 Score: 668.3 bits (1723), Expect = 7.0e-189
Identity = 338/338 (100.00%), Postives = 338/338 (100.00%), Query Frame = 1 

Query: 1   MAVSLFTPSISSFNNIAPPPHFSPTPSHNASDFKFRRRSYCRVHRKTVSFSSSPRLPVSL 60
           MAVSLFTPSISSFNNIAPPPHFSPTPSHNASDFKFRRRSYCRVHRKTVSFSSSPRLPVSL
Sbjct: 1   MAVSLFTPSISSFNNIAPPPHFSPTPSHNASDFKFRRRSYCRVHRKTVSFSSSPRLPVSL 60

Query: 61  RFLVYGRRNLANFICSAADKPEISSTAKIRSEVLSPFRSVRMFFYLTFIASGTLGGLIAT 120
           RFLVYGRRNLANFICSAADKPEISSTAKIRSEVLSPFRSVRMFFYLTFIASGTLGGLIAT
Sbjct: 61  RFLVYGRRNLANFICSAADKPEISSTAKIRSEVLSPFRSVRMFFYLTFIASGTLGGLIAT 120

Query: 121 TQLLGALANSSRADEVPDILEGLGVDFGAVALFAFLYFRENNAKNAQLARLSREESLSNL 180
           TQLLGALANSSRADEVPDILEGLGVDFGAVALFAFLYFRENNAKNAQLARLSREESLSNL
Sbjct: 121 TQLLGALANSSRADEVPDILEGLGVDFGAVALFAFLYFRENNAKNAQLARLSREESLSNL 180

Query: 181 KLRVDQNKVIPISILRGIARLVICAGPESFIIEAFKSSEPFTERLLERGVLVVPLATDVT 240
           KLRVDQNKVIPISILRGIARLVICAGPESFIIEAFKSSEPFTERLLERGVLVVPLATDVT
Sbjct: 181 KLRVDQNKVIPISILRGIARLVICAGPESFIIEAFKSSEPFTERLLERGVLVVPLATDVT 240

Query: 241 TLNFEFDDREEVKDITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSPVYLSLRMDG 300
           TLNFEFDDREEVKDITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSPVYLSLRMDG
Sbjct: 241 TLNFEFDDREEVKDITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSPVYLSLRMDG 300

Query: 301 RVRGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL 339
           RVRGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
Sbjct: 301 RVRGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL 338

[Close]
BLAST of Cucsa.140460 vs. NCBI nr
Match: gi|659093061|ref|XP_008447350.1| (PREDICTED: protein LOW PSII ACCUMULATION 1, chloroplastic [Cucumis melo])

HSP 1 Score: 624.4 bits (1609), Expect = 1.2e-175
Identity = 317/338 (93.79%), Postives = 327/338 (96.75%), Query Frame = 1 

Query: 1   MAVSLFTPSISSFNNIAPPPHFSPTPSHNASDFKFRRRSYCRVHRKTVSFSSSPRLPVSL 60
           MAVSL T  +SSFNNIAPPPHFSPTPSHNA DFKF RRS   VHRKTVSFSSSPRLPVSL
Sbjct: 1   MAVSLSTLIVSSFNNIAPPPHFSPTPSHNAPDFKFCRRSCFHVHRKTVSFSSSPRLPVSL 60

Query: 61  RFLVYGRRNLANFICSAADKPEISSTAKIRSEVLSPFRSVRMFFYLTFIASGTLGGLIAT 120
           RF VYGRRNLAN+I SAADKPEISSTAKIRSEVLSPFRSVRMFFYLTFIASGTLGGLIAT
Sbjct: 61  RFHVYGRRNLANYIYSAADKPEISSTAKIRSEVLSPFRSVRMFFYLTFIASGTLGGLIAT 120

Query: 121 TQLLGALANSSRADEVPDILEGLGVDFGAVALFAFLYFRENNAKNAQLARLSREESLSNL 180
           TQLLGALANSSRADEVPDIL+GLG+DFGAVALFAFLYFRENNAKNAQLARLSREESLSNL
Sbjct: 121 TQLLGALANSSRADEVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNL 180

Query: 181 KLRVDQNKVIPISILRGIARLVICAGPESFIIEAFKSSEPFTERLLERGVLVVPLATDVT 240
           KLRVDQNKVIPIS LRGIARLVICAGPESF+IEAFKSSEPFTE+LLERGVLVVPLATDVT
Sbjct: 181 KLRVDQNKVIPISTLRGIARLVICAGPESFVIEAFKSSEPFTEQLLERGVLVVPLATDVT 240

Query: 241 TLNFEFDDREEVKDITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSPVYLSLRMDG 300
           TLNFEFD+REEVKDIT+KRK+LWRLTPVYMTEWSAWLDEQKKLAGV+SDSPVYLSLRMDG
Sbjct: 241 TLNFEFDEREEVKDITSKRKKLWRLTPVYMTEWSAWLDEQKKLAGVSSDSPVYLSLRMDG 300

Query: 301 RVRGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL 339
           RVRGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
Sbjct: 301 RVRGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL 338

[Close]
BLAST of Cucsa.140460 vs. NCBI nr
Match: gi|590715027|ref|XP_007050079.1| (Uncharacterized protein isoform 1 [Theobroma cacao])

HSP 1 Score: 429.5 bits (1103), Expect = 5.5e-117
Identity = 214/285 (75.09%), Postives = 246/285 (86.32%), Query Frame = 1 

Query: 58  VSLRFLVYGRRNLANFICSAADKP----EISSTAKIRSEVLSPFRSVRMFFYLTFIASGT 117
           + L+F        ++ +CSAA+KP    EISS AKIRSEVLSPFRSVRMFFYL FIASG 
Sbjct: 60  IDLKFHAKPSSVSSSVVCSAANKPSSSSEISSAAKIRSEVLSPFRSVRMFFYLAFIASGA 119

Query: 118 LGGLIATTQLLGALANSSRADEVPDILEGLGVDFGAVALFAFLYFRENNAKNAQLARLSR 177
           LGGLIA TQL+ AL N +R+ EVPD+L  LG+D  AV++FAFLYFREN AKNAQ+ARLSR
Sbjct: 120 LGGLIAFTQLIAALTNPARSSEVPDLLTSLGIDVAAVSIFAFLYFRENTAKNAQIARLSR 179

Query: 178 EESLSNLKLRVDQNKVIPISILRGIARLVICAGPESFIIEAFKSSEPFTERLLERGVLVV 237
           EESLSNLKLRVDQNK+I +S LRGIARLVICAGP SFI+E+FKSSEPFTE LL+RGVLV+
Sbjct: 180 EESLSNLKLRVDQNKIISVSSLRGIARLVICAGPASFILESFKSSEPFTEGLLQRGVLVI 239

Query: 238 PLATDVTTLNFEFDDREEVKDITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSPVY 297
           P ATD  +L+ +FDD E++K+ITTKRKRLW+LTPVY++EWS WLDEQKKLAGV+ +SPVY
Sbjct: 240 PFATDGNSLSLDFDDSEDMKEITTKRKRLWQLTPVYVSEWSEWLDEQKKLAGVSPESPVY 299

Query: 298 LSLRMDGRVRGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL 339
           LSLR+DGRVRGSGVGYPPWNA VAQLPPVKGLWSGLLDGMDGRVL
Sbjct: 300 LSLRLDGRVRGSGVGYPPWNAFVAQLPPVKGLWSGLLDGMDGRVL 344

[Close]
BLAST of Cucsa.140460 vs. NCBI nr
Match: gi|1009148806|ref|XP_015892134.1| (PREDICTED: protein LOW PSII ACCUMULATION 1, chloroplastic [Ziziphus jujuba])

HSP 1 Score: 427.9 bits (1099), Expect = 1.6e-116
Identity = 227/334 (67.96%), Postives = 267/334 (79.94%), Query Frame = 1 

Query: 9   SISSFNNIAPPPHFSPTPSHNASDFKFRRRSYCRVHRKTVSFSSSPRLPVSLRFLVYGRR 68
           S SS   + PP     T   N +DF+   + +  + RK  +F   P   V+ +      +
Sbjct: 7   SNSSLYILGPPS----THYRNKNDFRIYGQ-FLSLKRKPWTF---PSTSVTYQPFPTPNQ 66

Query: 69  NLANFICSAADKP----EISSTAKIRSEVLSPFRSVRMFFYLTFIASGTLGGLIATTQLL 128
           + ++  C A DKP    EISSTAKIRSEVLSPFRSVRMFFY+ FIASG+LGGLIATT+L+
Sbjct: 67  SSSSITCFATDKPSSSSEISSTAKIRSEVLSPFRSVRMFFYIAFIASGSLGGLIATTRLI 126

Query: 129 GALANSSRADEVPDILEGLGVDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRV 188
           GAL+N SRA EVP+IL+GLG+D GAV+LFAFLY+RENNAKNAQLARLSREESLSNLKLRV
Sbjct: 127 GALSNPSRAAEVPEILKGLGIDVGAVSLFAFLYYRENNAKNAQLARLSREESLSNLKLRV 186

Query: 189 DQNKVIPISILRGIARLVICAGPESFIIEAFKSSEPFTERLLERGVLVVPLATD-VTTLN 248
           D+ ++IP+S LRG ARLVICAGPESF+ EAF+ SEPFTERLLERGVLVVP ATD     +
Sbjct: 187 DEKRIIPVSSLRGNARLVICAGPESFVKEAFRLSEPFTERLLERGVLVVPFATDGYLPPS 246

Query: 249 FEFDDREEVKDITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSPVYLSLRMDGRVR 308
           FEFD+ EE KDIT KRKRLW+L PVY++EW+ WLDEQKKLAGV+++SPVYLSLR+DGRVR
Sbjct: 247 FEFDESEESKDITAKRKRLWQLGPVYVSEWTKWLDEQKKLAGVSTESPVYLSLRLDGRVR 306

Query: 309 GSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRV 338
           GSGVGYPPWNA VAQLPPVKG+WSGLLDG DGRV
Sbjct: 307 GSGVGYPPWNAFVAQLPPVKGMWSGLLDGFDGRV 332

[Close]
BLAST of Cucsa.140460 vs. NCBI nr
Match: gi|823127258|ref|XP_012434346.1| (PREDICTED: protein LOW PSII ACCUMULATION 1, chloroplastic [Gossypium raimondii])

HSP 1 Score: 424.9 bits (1091), Expect = 1.4e-115
Identity = 208/272 (76.47%), Postives = 244/272 (89.71%), Query Frame = 1 

Query: 71  ANFICSAADKP----EISSTAKIRSEVLSPFRSVRMFFYLTFIASGTLGGLIATTQLLGA 130
           ++ +CSAA+KP    ++SS AKIRSEVLSPFRSVRMFFYLTFIASG+LGGLIATTQL+ +
Sbjct: 55  SSIVCSAANKPSSSSQVSSAAKIRSEVLSPFRSVRMFFYLTFIASGSLGGLIATTQLISS 114

Query: 131 LANSSRADEVPDILEGLGVDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQ 190
           L N +R+ EVPDIL GLG+D GAV++FAFLYFREN AKNAQLARLSREESLSNLKLRV+Q
Sbjct: 115 LTNPARSSEVPDILTGLGIDIGAVSIFAFLYFRENTAKNAQLARLSREESLSNLKLRVNQ 174

Query: 191 NKVIPISILRGIARLVICAGPESFIIEAFKSSEPFTERLLERGVLVVPLATDVTTLNFEF 250
           NK+I +S LRGIARLVIC+GP SFI+E+FK SEPFTE LLERGVLVVP ATD  + + +F
Sbjct: 175 NKIISVSSLRGIARLVICSGPASFILESFKLSEPFTESLLERGVLVVPFATDGNSPSLDF 234

Query: 251 DDREEVKDITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSPVYLSLRMDGRVRGSG 310
           D+ E++K+IT KRKRLW+L PVY++EW+ WLDEQKKLAG++ +SPVYLSLR+DGRVRGSG
Sbjct: 235 DESEDMKEITEKRKRLWQLAPVYVSEWTEWLDEQKKLAGISPESPVYLSLRLDGRVRGSG 294

Query: 311 VGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL 339
           VG+PPWNALVAQLPPVKGLWSGLLDGMDGRVL
Sbjct: 295 VGFPPWNALVAQLPPVKGLWSGLLDGMDGRVL 326

The following BLAST results are available for this feature:
BLAST of Cucsa.140460 vs. Swiss-Prot
Match NameE-valueIdentityDescription
LPA1_ARATH2.3e-3031.72Protein LOW PSII ACCUMULATION 1, chloroplastic OS=Arabidopsis thaliana GN=LPA1 P... [more]
BLAST of Cucsa.140460 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L902_CUCSA4.9e-189100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G621430 PE=4 SV=1[more]
A0A061DQ88_THECC3.8e-11775.09Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_003773 PE=4 SV=1[more]
A0A0D2Q2X4_GOSRA9.5e-11676.47Uncharacterized protein OS=Gossypium raimondii GN=B456_001G235900 PE=4 SV=1[more]
A0A068U5J6_COFCA1.0e-11477.65Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00016315001 PE=4 SV=1[more]
A0A0S3SRM6_PHAAN2.3e-11477.41Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G222800 PE=... [more]
BLAST of Cucsa.140460 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G28740.14.5e-10160.25 FUNCTIONS IN: molecular_function unknown[more]
AT1G02910.11.3e-3131.72 tetratricopeptide repeat (TPR)-containing protein[more]
BLAST of Cucsa.140460 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449468602|ref|XP_004152010.1|7.0e-189100.00PREDICTED: protein LOW PSII ACCUMULATION 1, chloroplastic [Cucumis sativus][more]
gi|659093061|ref|XP_008447350.1|1.2e-17593.79PREDICTED: protein LOW PSII ACCUMULATION 1, chloroplastic [Cucumis melo][more]
gi|590715027|ref|XP_007050079.1|5.5e-11775.09Uncharacterized protein isoform 1 [Theobroma cacao][more]
gi|1009148806|ref|XP_015892134.1|1.6e-11667.96PREDICTED: protein LOW PSII ACCUMULATION 1, chloroplastic [Ziziphus jujuba][more]
gi|823127258|ref|XP_012434346.1|1.4e-11576.47PREDICTED: protein LOW PSII ACCUMULATION 1, chloroplastic [Gossypium raimondii][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR021883LPA1-like
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009658 chloroplast organization
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0008150 biological_process
cellular_component GO:0009507 chloroplast
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.140460.1Cucsa.140460.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021883Protein of unknown function DUF3493PFAMPF11998DUF3493coord: 84..161
score: 1.7
NoneNo IPR availablePANTHERPTHR35498FAMILY NOT NAMEDcoord: 82..338
score: 1.4E
NoneNo IPR availablePANTHERPTHR35498:SF1SUBFAMILY NOT NAMEDcoord: 82..338
score: 1.4E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.140460Cla002752Watermelon (97103) v1cgywmB246
Cucsa.140460Csa3G621430Cucumber (Chinese Long) v2cgycuB204
Cucsa.140460MELO3C012814Melon (DHL92) v3.5.1cgymeB234
Cucsa.140460ClCG07G001580Watermelon (Charleston Gray)cgywcgB239
Cucsa.140460CSPI03G27090Wild cucumber (PI 183967)cgycpiB207
Cucsa.140460Lsi05G010710Bottle gourd (USVL1VR-Ls)cgylsiB225
Cucsa.140460Cp4.1LG15g01170Cucurbita pepo (Zucchini)cgycpeB0379
Cucsa.140460MELO3C012814.2Melon (DHL92) v3.6.1cgymedB231
Cucsa.140460CsaV3_3G028580Cucumber (Chinese Long) v3cgycucB212
Cucsa.140460Cla97C07G129840Watermelon (97103) v2cgywmbB238
Cucsa.140460Bhi05G000097Wax gourdcgywgoB276
Cucsa.140460Carg16916Silver-seed gourdcarcgyB0843
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.140460Cucumber (Chinese Long) v3cgycucB211
Cucsa.140460Watermelon (97103) v2cgywmbB237
Cucsa.140460Cucumber (Gy14) v1cgycgyB090
Cucsa.140460Cucurbita maxima (Rimu)cgycmaB0392
Cucsa.140460Cucurbita maxima (Rimu)cgycmaB0393
Cucsa.140460Cucurbita moschata (Rifu)cgycmoB0390
Cucsa.140460Cucurbita moschata (Rifu)cgycmoB0391
Cucsa.140460Cucurbita moschata (Rifu)cgycmoB0392
Cucsa.140460Wild cucumber (PI 183967)cgycpiB206
Cucsa.140460Cucumber (Chinese Long) v2cgycuB203
Cucsa.140460Melon (DHL92) v3.5.1cgymeB235
Cucsa.140460Watermelon (Charleston Gray)cgywcgB238
Cucsa.140460Watermelon (97103) v1cgywmB248
Cucsa.140460Watermelon (97103) v1cgywmB249
Cucsa.140460Cucurbita pepo (Zucchini)cgycpeB0380
Cucsa.140460Cucurbita pepo (Zucchini)cgycpeB0381
Cucsa.140460Bottle gourd (USVL1VR-Ls)cgylsiB226
Cucsa.140460Melon (DHL92) v3.6.1cgymedB232
Cucsa.140460Silver-seed gourdcarcgyB0275
Cucsa.140460Silver-seed gourdcarcgyB0884