Cucsa.136000 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.136000
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionActin-related protein 2/3 complex subunit 5
Locationscaffold01044 : 763626 .. 767976 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGCGAGAAAACTTGCCATCTCTTCTTTTCACAAATCACATTTAGCTCCGATTTCGTTCATACAACTGTTGGGTTATCGATCTGTATTGCTATGATCGGTTTTTAGTTTAGCTCCATCAAATCCTACTGCAAGTAGGGTGATACCGCAAAGGCGAAAATGGCGACTACATGCGATTTTGTCGAAGCAGATAATGCAGAAGCCATAATCACCAGAATTGAGCACAAATCTCGAAAGATTGAGAGCTTACTTAAACAGTAATGACTCCTATACCTTCTCTTTGATTTACATCATTTAATTTATTTAACTCCTCTTATTGAAGACGCCCCAATTTGTCAACTTTTGTTTTCTTCCGTAAAAGGTTAAAACCAGTCGAAGCTCTTAAAACTGCTCTTGAAGGTTCCCCTCCAAATACCCGGGACGAGCGTTGTAAGGTATCCTTTCTTTCTTACTGCCTACTGAGCTGTCGTCTCTTGTTCAGAGCTAATGACGGTGTAGGATCGATATTCATTTTGGTTCCTTGCATTTTTTCTGTGATTATGTGTTTTGTTTTTATTATTTTATCTGTGGGTAATGCTAGAAATGTTAAGGGAAATTATTGGAGAATCCTTGTTTTTTAGTTATCATTAAATCTATTTGTTATGCTTTCTTAATGATGATGCCAATTAGGATCTTTGGATGTTGATTTAATTTTTGGAAAGAGTTTGCTGTGTTTGTTTGCAGCCACTGAAAATGAATAGGCTTGCTGTTTCTTTCATGTTTATGTTTTGTTGGTCTGCTTGACATTGGGAGGATGAGTTAATCTGATGTGATTATTTGGACTTCTTCAGTCAGCAAATTGGATTGTGGTGCATAGGGCTCTCATGGCTATAAAGGATGTAGATGGGATGTTTTCTTCGTTGGATCCAGAGTACTATGATATTCTAATGAAGTGAGTTTATGCGGTATTTAACTGCAAAAATATCAATTCTCATTACTTCTACTTATTTCATTCTCATCAGGAATGTTTAAATAGTTCCAAGTTTACTTTCTGATATTATTCTTTTGCTATGAAATTTATACTTAAGTGATTGGGTTGATCCTACTATGAGCTATGTAAACAAACATTCTGTTTCTTTTtATTTTTTtAATCTCTTCAGATTTCTACTGCTAGCTGTGTTCTTGTCAGTAGGACATATGGTAGTCTTTAGATACTTGGAAGATTGGTTCACTGATATGATTTTTTTtGCTTGTGTAAGGAGTCTTCAATGGTTTATCCTTGGCTAACTTGTATTGCTTCACCCCTTTATGGTTTGGTTTTTGTCCATTGGAATGTAGAGACTTGTTCACGGCATCCTACTTTTTGAAAAGCTAGGTGTTGGCCTTTGAACGCCTTTGGAAATTAGAAATATATCAGGTTTTATGAAATTCTAAAAGTTCCAAGTGATTCAATGTTTTTGAGTGAAGAATGTTCCCCTCCTGTCTTCAAGGTTTCATTTTAATGGTTCAATGAAGTCAAAAGTCTTCCTTCAGAGATTTGGTTTGATTGTAATTAGAGGGCTCCTTCTCTCCTATCAGTTGTCCTCACCACATGGTTACTTGTTCTCAGAGTTTCAATTTCGGTGGTGTTTGTATTTGCTTTTATTTTCTGAGCAAGTTCAGTGTTGGGATATATTCCGATGCATTTGCTTTATCTTGCTTTTATGTCTCTTTGTATTTCAAGCTCTAGCCTCTCTTTGTTCATTCAGTGAAAAGTTTTGTTTCTGTTAAAAaGAAAAaTTATATTTTAGCTAGGAGTCTTTGTGAAAGTGGAAATCTCTCTAACCATCTTGCTTGAAATATCTCATCACATCTTCTGAATCTAGCAAGTCATGTCCAACCCTTCTGCCGATGGGTTTTGTAAAATTTATTATTTTTGTCCTATATTATCATGTGTCTATTTAGCATGCTTAACAAGTGTTCAATACATGTCTAATAATGTGTAATAATGTGAGACATATATTGACTTTGTAGTTTATATAACTAGTTTGTAACACATGCTAACAAACATCTGACACATGTCCAACAAGTGTGGAGTGTCTGAATCATTCCAACACATACACATTAGTCAAATTAAAATGTTTGTATTTCTTTAAGGCCTTGTCTTCCAGCAGTCTCTCAATTTGTTTTCCAACACATTCCCTAATTTTCAAGGATTATGAACACCAACAAGAAATAAGTGAGGATGCTTGACAATACTAATTTGGCCAATGCTAATCCTTCCCTTTGGAACATCAGGACTGTTTCTCGTGGAGCATTTTTTGAGATTAATGACAGGGTTTCAAAAGCCAATTGGCCTCAATTAGTCTCCAAGCATAGGCACCATGTGAATCATTGGTGGGGAAGTAGTGGGGGATCGCTTTTTCTGAGATTAATGACAGTGTTTCAAAAGCCCATGACCTCGATTGTCCTCCAAGCATCAAATGGAAGGTTTTCTCTCCTGAGTATATGTTTGTTCCTCGTGTTTTAAGTACCACCAAGAATATTTGTTCATGCGATCTTATAACACTTAACCTTTTCTTTTCTTTGAAAGGATTCACCAAGAGAGAAATCGACAAACTAAAATAACTAAACAAAAAGCCTGCATTTTAAGCATGGTTGCAATAGAATAAAATATGATCTTTGTTTTCTTCTTACTATATGCATATGGCATCATACCAACTGGACGAAATGGAGAATTAGATTTCTAGCTTGGATTTTTATCTTGGGCACTATACCGATAATATCATGGAGAAGGTCCCATATGAACCAAGAGAGAAGGGAAGCTTCGTGAGAGTCATTGAGGCATTCCATTGTGAAATTTTTGGACTTTACCTTGCACTAAGATCAGAAACCATCTCAATATTCCAAAGAGATAACTATAGAAGATTTAAAAAATTACTCCAAATGGTGTTTTGTTCAGTTAAGTTAACCATTTGGCCATGAACGTGATATTTCTTTTCCTTGAGATTACTAAGACTAAACTTTCCAAGATGAAGAGGAAGCTTACTCTTTTCCAAATGACAATGTATGATAGAC

mRNA sequence

GGCGAGAAAACTTGCCATCTCTTCTTTTCACAAATCACATTTAGCTCCGATTTCGTTCATACAACTGTTGGGTTATCGATCTGTATTGCTATGATCGGTTTTTAGTTTAGCTCCATCAAATCCTACTGCAAGTAGGGTGATACCGCAAAGGCGAAAATGGCGACTACATGCGATTTTGTCGAAGCAGATAATGCAGAAGCCATAATCACCAGAATTGAGCACAAATCTCGAAAGATTGAGAGCTTACTTAAACAGTTAAAACCAGTCGAAGCTCTTAAAACTGCTCTTGAAGGTTCCCCTCCAAATACCCGGGACGAGCGTTGTAAGTCAGCAAATTGGATTGTGGTGCATAGGGCTCTCATGGCTATAAAGGATGTAGATGGGATGTTTTCTTCGTTGGATCCAGAGTACTATGATATTCTAATGAAGACTGTTTCTCGTGGAGCATTTTTTGAGATTAATGACAGGGTTTCAAAAGCCAATTGGCCTCAATTAGTCTCCAAGCATAGGCACCATGTGAATCATTGGTGGGGAAGTAGTGGGGGATCGCTTTTTCTGAGATTAATGACAGTGTTTCAAAAGCCCATGACCTCGATTGTCCTCCAAGCATCAAATGGAAGGTTTTCTCTCCTGAGTATATGTTTGTTCCTCGTGTTTTAAGTACCACCAAGAATATTTGTTCATGCGATCTTATAACACTTAACCTTTTCTTTTCTTTGAAAGGATTCACCAAGAGAGAAATCGACAAACTAAAATAACTAAACAAAAAGCCTGCATTTTAAGCATGGTTGCAATAGAATAAAATATGATCTTTGTTTTCTTCTTACTATATGCATATGGCATCATACCAACTGGACGAAATGGAGAATTAGATTTCTAGCTTGGATTTTTATCTTGGGCACTATACCGATAATATCATGGAGAAGGTCCCATATGAACCAAGAGAGAAGGGAAGCTTCGTGAGAGTCATTGAGGCATTCCATTGTGAAATTTTTGGACTTTACCTTGCACTAAGATCAGAAACCATCTCAATATTCCAAAGAGATAACTATAGAAGATTTAAAAAATTACTCCAAATGGTGTTTTGTTCAGTTAAGTTAACCATTTGGCCATGAACGTGATATTTCTTTTCCTTGAGATTACTAAGACTAAACTTTCCAAGATGAAGAGGAAGCTTACTCTTTTCCAAATGACAATGTATGATAGAC

Coding sequence (CDS)

ATGGCGACTACATGCGATTTTGTCGAAGCAGATAATGCAGAAGCCATAATCACCAGAATTGAGCACAAATCTCGAAAGATTGAGAGCTTACTTAAACAGTTAAAACCAGTCGAAGCTCTTAAAACTGCTCTTGAAGGTTCCCCTCCAAATACCCGGGACGAGCGTTGTAAGTCAGCAAATTGGATTGTGGTGCATAGGGCTCTCATGGCTATAAAGGATGTAGATGGGATGTTTTCTTCGTTGGATCCAGAGTACTATGATATTCTAATGAAGACTGTTTCTCGTGGAGCATTTTTTGAGATTAATGACAGGGTTTCAAAAGCCAATTGGCCTCAATTAGTCTCCAAGCATAGGCACCATGTGAATCATTGGTGGGGAAGTAGTGGGGGATCGCTTTTTCTGAGATTAATGACAGTGTTTCAAAAGCCCATGACCTCGATTGTCCTCCAAGCATCAAATGGAAGGTTTTCTCTCCTGAGTATATGTTTGTTCCTCGTGTTTTAA

Protein sequence

MATTCDFVEADNAEAIITRIEHKSRKIESLLKQLKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKTVSRGAFFEINDRVSKANWPQLVSKHRHHVNHWWGSSGGSLFLRLMTVFQKPMTSIVLQASNGRFSLLSICLFLVF*
Homology
[Close]
BLAST of Cucsa.136000 vs. Swiss-Prot
Match: ARC5A_ARATH (Actin-related protein 2/3 complex subunit 5A OS=Arabidopsis thaliana GN=ARPC5A PE=1 SV=2)

HSP 1 Score: 152.9 bits (385), Expect = 3.1e-36
Identity = 77/91 (84.62%), Postives = 82/91 (90.11%), Query Frame = 1 

Query: 6  DFVEADNAEAIITRIEHKSRKIESLLKQLKPVEALKTALEGSPPNTRDERCKSANWIVVH 65
          +FVEADNAEAII RIE KSRKIESLLKQ K VEALKTALEGSPP TRDERCKSANWIVVH
Sbjct: 3  EFVEADNAEAIIARIETKSRKIESLLKQYKHVEALKTALEGSPPKTRDERCKSANWIVVH 62

Query: 66 RALMAIKDVDGMFSSLDPEYYDILMKTVSRG 97
          RALMAIKD+DGM ++LD EYYDILMK + RG
Sbjct: 63 RALMAIKDIDGMLNALDVEYYDILMKYLYRG 93

[Close]
BLAST of Cucsa.136000 vs. Swiss-Prot
Match: ARC5B_ARATH (Actin-related protein 2/3 complex subunit 5B OS=Arabidopsis thaliana GN=ARPC5B PE=3 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 2.1e-32
Identity = 71/96 (73.96%), Postives = 79/96 (82.29%), Query Frame = 1 

Query: 1  MATTCDFVEADNAEAIITRIEHKSRKIESLLKQLKPVEALKTALEGSPPNTRDERCKSAN 60
          MA    FVEADNAE I+ RIE KS+KIESLLK  K VEALKTAL+GSPP T DERCKSAN
Sbjct: 1  MAGAAAFVEADNAEEIMARIETKSQKIESLLKHYKHVEALKTALDGSPPKTLDERCKSAN 60

Query: 61 WIVVHRALMAIKDVDGMFSSLDPEYYDILMKTVSRG 97
          WIVVHRA+MAIKD++GM +SL  EYYDILMK + RG
Sbjct: 61 WIVVHRAIMAIKDIEGMLNSLTAEYYDILMKYLYRG 96

[Close]
BLAST of Cucsa.136000 vs. TrEMBL
Match: A0A0A0KD59_CUCSA (Actin-related protein 2/3 complex subunit 5 OS=Cucumis sativus GN=Csa_6G008040 PE=3 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.6e-44
Identity = 93/96 (96.88%), Postives = 94/96 (97.92%), Query Frame = 1 

Query: 1  MATTCDFVEADNAEAIITRIEHKSRKIESLLKQLKPVEALKTALEGSPPNTRDERCKSAN 60
          MATTCDFVEADNAEAIITRIEHKSRKIESLLKQLKPVEALKTALEGSPPNTRDERCKSAN
Sbjct: 1  MATTCDFVEADNAEAIITRIEHKSRKIESLLKQLKPVEALKTALEGSPPNTRDERCKSAN 60

Query: 61 WIVVHRALMAIKDVDGMFSSLDPEYYDILMKTVSRG 97
          WIVVHRALMAIKDVDGMFSSLDPEYYDILMK + RG
Sbjct: 61 WIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRG 96

[Close]
BLAST of Cucsa.136000 vs. TrEMBL
Match: W9R3V7_9ROSA (Actin-related protein 2/3 complex subunit 5 OS=Morus notabilis GN=L484_021833 PE=3 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.1e-40
Identity = 89/96 (92.71%), Postives = 90/96 (93.75%), Query Frame = 1 

Query: 1  MATTCDFVEADNAEAIITRIEHKSRKIESLLKQLKPVEALKTALEGSPPNTRDERCKSAN 60
          MA T  FVEADNAEAIITRIEHKSRKIESLLKQ KPVEALKTALEGSPPNTRDERCKSAN
Sbjct: 1  MAGTDAFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSAN 60

Query: 61 WIVVHRALMAIKDVDGMFSSLDPEYYDILMKTVSRG 97
          WIVVHRALMAIKDVDGMFSSLDPEYYDILMK + RG
Sbjct: 61 WIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRG 96

[Close]
BLAST of Cucsa.136000 vs. TrEMBL
Match: A5AQ06_VITVI (Actin-related protein 2/3 complex subunit 5 OS=Vitis vinifera GN=VIT_15s0021g01870 PE=3 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 1.2e-39
Identity = 85/96 (88.54%), Postives = 90/96 (93.75%), Query Frame = 1 

Query: 1  MATTCDFVEADNAEAIITRIEHKSRKIESLLKQLKPVEALKTALEGSPPNTRDERCKSAN 60
          MA T +FVEADNAEAIITRIEHKSRKIESLLKQ KP+EALKTALEGSPPNTRDERCKSAN
Sbjct: 1  MAGTKEFVEADNAEAIITRIEHKSRKIESLLKQHKPIEALKTALEGSPPNTRDERCKSAN 60

Query: 61 WIVVHRALMAIKDVDGMFSSLDPEYYDILMKTVSRG 97
          WIVVHRA+MAIKDVD +FSSLDPEYYDILMK + RG
Sbjct: 61 WIVVHRAMMAIKDVDSLFSSLDPEYYDILMKYLYRG 96

[Close]
BLAST of Cucsa.136000 vs. TrEMBL
Match: A0A059C433_EUCGR (Actin-related protein 2/3 complex subunit 5 OS=Eucalyptus grandis GN=EUGRSUZ_E01576 PE=3 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 1.2e-39
Identity = 84/96 (87.50%), Postives = 90/96 (93.75%), Query Frame = 1 

Query: 1  MATTCDFVEADNAEAIITRIEHKSRKIESLLKQLKPVEALKTALEGSPPNTRDERCKSAN 60
          MA T DFVEADNAEAII+RIEHKSRKIESLLKQ +PVEALKTALEGSPPNTRDERCKSAN
Sbjct: 2  MAATVDFVEADNAEAIISRIEHKSRKIESLLKQSRPVEALKTALEGSPPNTRDERCKSAN 61

Query: 61 WIVVHRALMAIKDVDGMFSSLDPEYYDILMKTVSRG 97
          WIVVHRA+MAIKD+D +FSSLDPEYYDILMK + RG
Sbjct: 62 WIVVHRAIMAIKDLDALFSSLDPEYYDILMKYLYRG 97

[Close]
BLAST of Cucsa.136000 vs. TrEMBL
Match: M5WAX3_PRUPE (Actin-related protein 2/3 complex subunit 5 OS=Prunus persica GN=PRUPE_ppa013215mg PE=3 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 1.2e-39
Identity = 86/96 (89.58%), Postives = 90/96 (93.75%), Query Frame = 1 

Query: 1  MATTCDFVEADNAEAIITRIEHKSRKIESLLKQLKPVEALKTALEGSPPNTRDERCKSAN 60
          MA T +FVEADNAEAIITRIE KSRKIESLLKQ KPVEALKTALEGSPPNTRDERCKSAN
Sbjct: 1  MAGTEEFVEADNAEAIITRIEQKSRKIESLLKQYKPVEALKTALEGSPPNTRDERCKSAN 60

Query: 61 WIVVHRALMAIKDVDGMFSSLDPEYYDILMKTVSRG 97
          WI+VHRA+MAIKDVDGMFSSLDPEYYDILMK + RG
Sbjct: 61 WIMVHRAIMAIKDVDGMFSSLDPEYYDILMKYLYRG 96

[Close]
BLAST of Cucsa.136000 vs. TAIR10
Match: AT4G01710.1 (AT4G01710.1 ARP2/3 complex 16 kDa subunit (p16-Arc))

HSP 1 Score: 152.9 bits (385), Expect = 1.7e-37
Identity = 77/91 (84.62%), Postives = 82/91 (90.11%), Query Frame = 1 

Query: 6  DFVEADNAEAIITRIEHKSRKIESLLKQLKPVEALKTALEGSPPNTRDERCKSANWIVVH 65
          +FVEADNAEAII RIE KSRKIESLLKQ K VEALKTALEGSPP TRDERCKSANWIVVH
Sbjct: 3  EFVEADNAEAIIARIETKSRKIESLLKQYKHVEALKTALEGSPPKTRDERCKSANWIVVH 62

Query: 66 RALMAIKDVDGMFSSLDPEYYDILMKTVSRG 97
          RALMAIKD+DGM ++LD EYYDILMK + RG
Sbjct: 63 RALMAIKDIDGMLNALDVEYYDILMKYLYRG 93

[Close]
BLAST of Cucsa.136000 vs. TAIR10
Match: AT5G65274.1 (AT5G65274.1 ARP2/3 complex 16 kDa subunit (p16-Arc))

HSP 1 Score: 140.2 bits (352), Expect = 1.2e-33
Identity = 71/96 (73.96%), Postives = 79/96 (82.29%), Query Frame = 1 

Query: 1  MATTCDFVEADNAEAIITRIEHKSRKIESLLKQLKPVEALKTALEGSPPNTRDERCKSAN 60
          MA    FVEADNAE I+ RIE KS+KIESLLK  K VEALKTAL+GSPP T DERCKSAN
Sbjct: 1  MAGAAAFVEADNAEEIMARIETKSQKIESLLKHYKHVEALKTALDGSPPKTLDERCKSAN 60

Query: 61 WIVVHRALMAIKDVDGMFSSLDPEYYDILMKTVSRG 97
          WIVVHRA+MAIKD++GM +SL  EYYDILMK + RG
Sbjct: 61 WIVVHRAIMAIKDIEGMLNSLTAEYYDILMKYLYRG 96

[Close]
BLAST of Cucsa.136000 vs. NCBI nr
Match: gi|449441438|ref|XP_004138489.1| (PREDICTED: actin-related protein 2/3 complex subunit 5A [Cucumis sativus])

HSP 1 Score: 187.2 bits (474), Expect = 2.4e-44
Identity = 93/96 (96.88%), Postives = 94/96 (97.92%), Query Frame = 1 

Query: 1  MATTCDFVEADNAEAIITRIEHKSRKIESLLKQLKPVEALKTALEGSPPNTRDERCKSAN 60
          MATTCDFVEADNAEAIITRIEHKSRKIESLLKQLKPVEALKTALEGSPPNTRDERCKSAN
Sbjct: 1  MATTCDFVEADNAEAIITRIEHKSRKIESLLKQLKPVEALKTALEGSPPNTRDERCKSAN 60

Query: 61 WIVVHRALMAIKDVDGMFSSLDPEYYDILMKTVSRG 97
          WIVVHRALMAIKDVDGMFSSLDPEYYDILMK + RG
Sbjct: 61 WIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRG 96

[Close]
BLAST of Cucsa.136000 vs. NCBI nr
Match: gi|659081508|ref|XP_008441367.1| (PREDICTED: actin-related protein 2/3 complex subunit 5A [Cucumis melo])

HSP 1 Score: 183.3 bits (464), Expect = 3.4e-43
Identity = 91/96 (94.79%), Postives = 93/96 (96.88%), Query Frame = 1 

Query: 1  MATTCDFVEADNAEAIITRIEHKSRKIESLLKQLKPVEALKTALEGSPPNTRDERCKSAN 60
          MATTC+FVEADNAEAIITRIEHKSRKIESLLKQ KPVEALKTALEGSPPNTRDERCKSAN
Sbjct: 1  MATTCEFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSAN 60

Query: 61 WIVVHRALMAIKDVDGMFSSLDPEYYDILMKTVSRG 97
          WIVVHRALMAIKDVDGMFSSLDPEYYDILMK + RG
Sbjct: 61 WIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRG 96

[Close]
BLAST of Cucsa.136000 vs. NCBI nr
Match: gi|1009143859|ref|XP_015889484.1| (PREDICTED: actin-related protein 2/3 complex subunit 5A [Ziziphus jujuba])

HSP 1 Score: 175.6 bits (444), Expect = 7.1e-41
Identity = 88/96 (91.67%), Postives = 91/96 (94.79%), Query Frame = 1 

Query: 1  MATTCDFVEADNAEAIITRIEHKSRKIESLLKQLKPVEALKTALEGSPPNTRDERCKSAN 60
          MA T +FVEADNAEAIITRIEHKSRKIESLLKQ KPVEALKTALEGSPPNTRDERCKSAN
Sbjct: 1  MAGTGEFVEADNAEAIITRIEHKSRKIESLLKQYKPVEALKTALEGSPPNTRDERCKSAN 60

Query: 61 WIVVHRALMAIKDVDGMFSSLDPEYYDILMKTVSRG 97
          WIVVHRA+MAIKDVDGMFSSLDPEYYDILMK + RG
Sbjct: 61 WIVVHRAIMAIKDVDGMFSSLDPEYYDILMKYLYRG 96

[Close]
BLAST of Cucsa.136000 vs. NCBI nr
Match: gi|703072505|ref|XP_010089302.1| (Actin-related protein 2/3 complex subunit 5 [Morus notabilis])

HSP 1 Score: 174.5 bits (441), Expect = 1.6e-40
Identity = 89/96 (92.71%), Postives = 90/96 (93.75%), Query Frame = 1 

Query: 1  MATTCDFVEADNAEAIITRIEHKSRKIESLLKQLKPVEALKTALEGSPPNTRDERCKSAN 60
          MA T  FVEADNAEAIITRIEHKSRKIESLLKQ KPVEALKTALEGSPPNTRDERCKSAN
Sbjct: 1  MAGTDAFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSAN 60

Query: 61 WIVVHRALMAIKDVDGMFSSLDPEYYDILMKTVSRG 97
          WIVVHRALMAIKDVDGMFSSLDPEYYDILMK + RG
Sbjct: 61 WIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRG 96

[Close]
BLAST of Cucsa.136000 vs. NCBI nr
Match: gi|1000981787|ref|XP_002511607.2| (PREDICTED: actin-related protein 2/3 complex subunit 5A [Ricinus communis])

HSP 1 Score: 171.4 bits (433), Expect = 1.3e-39
Identity = 86/96 (89.58%), Postives = 90/96 (93.75%), Query Frame = 1 

Query: 1  MATTCDFVEADNAEAIITRIEHKSRKIESLLKQLKPVEALKTALEGSPPNTRDERCKSAN 60
          MA   +FVEA+NAEAIITRIEHKSRKIESLLKQ KPVEALKTALEGSPPNTRDERCKSAN
Sbjct: 1  MAGREEFVEAENAEAIITRIEHKSRKIESLLKQYKPVEALKTALEGSPPNTRDERCKSAN 60

Query: 61 WIVVHRALMAIKDVDGMFSSLDPEYYDILMKTVSRG 97
          WIVVHRA+MAIKDVDGMFSSLDPEYYDILMK + RG
Sbjct: 61 WIVVHRAIMAIKDVDGMFSSLDPEYYDILMKYLYRG 96

The following BLAST results are available for this feature:
BLAST of Cucsa.136000 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ARC5A_ARATH3.1e-3684.62Actin-related protein 2/3 complex subunit 5A OS=Arabidopsis thaliana GN=ARPC5A P... [more]
ARC5B_ARATH2.1e-3273.96Actin-related protein 2/3 complex subunit 5B OS=Arabidopsis thaliana GN=ARPC5B P... [more]
BLAST of Cucsa.136000 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KD59_CUCSA1.6e-4496.88Actin-related protein 2/3 complex subunit 5 OS=Cucumis sativus GN=Csa_6G008040 P... [more]
W9R3V7_9ROSA1.1e-4092.71Actin-related protein 2/3 complex subunit 5 OS=Morus notabilis GN=L484_021833 PE... [more]
A5AQ06_VITVI1.2e-3988.54Actin-related protein 2/3 complex subunit 5 OS=Vitis vinifera GN=VIT_15s0021g018... [more]
A0A059C433_EUCGR1.2e-3987.50Actin-related protein 2/3 complex subunit 5 OS=Eucalyptus grandis GN=EUGRSUZ_E01... [more]
M5WAX3_PRUPE1.2e-3989.58Actin-related protein 2/3 complex subunit 5 OS=Prunus persica GN=PRUPE_ppa013215... [more]
BLAST of Cucsa.136000 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G01710.11.7e-3784.62 ARP2/3 complex 16 kDa subunit (p16-Arc)[more]
AT5G65274.11.2e-3373.96 ARP2/3 complex 16 kDa subunit (p16-Arc)[more]
BLAST of Cucsa.136000 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449441438|ref|XP_004138489.1|2.4e-4496.88PREDICTED: actin-related protein 2/3 complex subunit 5A [Cucumis sativus][more]
gi|659081508|ref|XP_008441367.1|3.4e-4394.79PREDICTED: actin-related protein 2/3 complex subunit 5A [Cucumis melo][more]
gi|1009143859|ref|XP_015889484.1|7.1e-4191.67PREDICTED: actin-related protein 2/3 complex subunit 5A [Ziziphus jujuba][more]
gi|703072505|ref|XP_010089302.1|1.6e-4092.71Actin-related protein 2/3 complex subunit 5 [Morus notabilis][more]
gi|1000981787|ref|XP_002511607.2|1.3e-3989.58PREDICTED: actin-related protein 2/3 complex subunit 5A [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006789ARPC5
IPR006789ARPC5
Vocabulary: Cellular Component
TermDefinition
GO:0005885Arp2/3 protein complex
GO:0015629actin cytoskeleton
GO:0005885Arp2/3 protein complex
GO:0015629actin cytoskeleton
Vocabulary: Biological Process
TermDefinition
GO:0030833regulation of actin filament polymerization
GO:0034314Arp2/3 complex-mediated actin nucleation
GO:0030833regulation of actin filament polymerization
GO:0034314Arp2/3 complex-mediated actin nucleation
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0034314 Arp2/3 complex-mediated actin nucleation
biological_process GO:0030833 regulation of actin filament polymerization
cellular_component GO:0005885 Arp2/3 protein complex
cellular_component GO:0015629 actin cytoskeleton
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.136000.1Cucsa.136000.1mRNA
Cucsa.136000.2Cucsa.136000.2mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006789Actin-related protein 2/3 complex subunit 5GENE3DG3DSA:1.25.40.190coord: 11..131
score: 3.3
IPR006789Actin-related protein 2/3 complex subunit 5PANTHERPTHR12644ARP2/3 COMPLEX 16 KD SUBUNIT P16-ARCcoord: 6..135
score: 9.4
IPR006789Actin-related protein 2/3 complex subunit 5PFAMPF04699P16-Arccoord: 14..131
score: 3.8
IPR006789Actin-related protein 2/3 complex subunit 5unknownSSF69103Arp2/3 complex 16 kDa subunit ARPC5coord: 7..131
score: 5.75