Cucsa.132920 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.132920
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	C-Myc-binding-like protein
Location	scaffold01037 : 750319 .. 753255 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATTCGGCCATGACCTAGATCAAACCGTGCAAATTGCAATGTTTTCTTTATAAATTTGTGACGCAGTTAATGAAAGTAGTAGTATCAATAGTGTGAGGAAACCATTCAATTTAGGAAATTCCCAGCATATGTAAACAATTCAGTAATGTTTTGGGCTATGATGAAGCTGAAACTCACCATCATGGCCCAAGGGAATCAATGGCAGCCGCTGTGCGGGTCAAAACTCAGACATATGCAGGCCCCGAAACCAATATTCTTGCGGCAATGGGGACGGATTCCATCAAACAATCATCAAATCGAACCCCcAACCAGCAAGCAACTGTGAAGGAGGAACCCCCATTTCTTCTCAATGGGACACAAAGAGGTCAGATCTATTTTCCCATTTTTGTTCTCAACTTATTCCGAGTTATTCCTCTTTTCGTTTCTTTCTATGGAAATTGACAACCCCATTTGTTGAATCGCTTCATCTTTGTTATAATTCCAACCCCTTTTCTGCGATTTAGGAAAAAGAAGCAAAGAAGGAAGCTTTCAGAAAGTATTTGGAGTCTAATGGCATTGTTGATGCTCTCACCAAAGGTTGTTTATCGCCATTTCTCAGCTTCTTCGCTCTCTGTTTTTCTTTTTCTTGAGAATTCTACCACTTTATCTATGCATTCGAATTTTGATACGTTTTCTATTTTGCATTTCTTTTACTGGGTTGAAGTTCTGGTTGCATTGTATGAGCAAAATGACAAGCCTTCCTCTGCTCTCGAGTAAGTTCTTTCTTTTTGTTTtGGGTTTGATCACGTTCTTATGCTTTGCTTGCTGCAGTGATTGTCGGAGATCAATAGTTGAGGTTAACCGTGGTTGTAGCTATTTAATTTTGCTGCTAGCTGGTTTTTCATTGAGGATAATGTCTTTCCTGAATCCTGTTTGTTTTATTTTCAAGCATATCAAATCTCAGTTACAAGCTGTCAAAACAAAGTTATTTCAACTGCGTTTAAATCTTATTTTGCCCCCTTAACGCTTCTTTTATTTCAATTTCATATCCATTTATCAGTTACTGATAGATAATATCACGATTCCTTATCCGAAATTTGGGTCTGATTGACACGTAATTGGATTAGTTTCGTTTTTCAAATTTCATAGAAAGTCGTGAAGAAAACTACAAAAGCAATTTTTTAAGTATTCCAAAAATGTATGTATTTATAGGTCTAATAAACTACAAGGCGTTGTTATGTTAGAGATAAATATTGTCAACAAGAGGTTTCTTATGAAAGTTATCGTTTACTTTTGCTTGTAATTTGATATGTCAAAAAaTATAGTTTTCTTTTTCTTTCTTTCTTTCTTAAATAAAGAAAATTTGAAACGGATAATTTTATTCAAGATAATAAAATTATACAAAACTTTCCTAGGAGTTCATAATAGCAAATTCCCATTGGAAGTAACCGTTGATAGACTTTCTTTTtCCTTTTtATCTGACAGATTTATTCAACAAAGACTTGGGGGTCCATCTAAAGCTGAATATGAGAAGTTACAATCTGAGATGGCAGATTTGCAAGTCAAGTATGATGAGCTTCTAGCTACACACAAGGAAACCTGTAAAGAGGTAGTGTCGAATTGAAGTTATCTGACTCGATGCTATTCCTTGTTAAGAATACGTGTAATGGGTAAAATATATTCTAAACTATGAGTCTATACTTTTGGGTTAAGTGGTAACTTGATATGATAAGACACACAAAAATGTAGTGGTCTCAGGCTTAAGCATGAAGAGAAAAAaTATAATAAATTAGATCTTTTGTAGGTGACCATTTAATTAGGTTGTTGGAAGATATTTCTTAACTTCTTCCAAAATATTTTTAAAATAATAAACTAAAAAaTGACAAGACACAAGAGTGTACTTTCTTATATATTTATGTATTGTCTACCACATCAACTAGCATGATTAGTTGATCAAGTTGTGCAGTTAAAATGTTGAAGGACAAGCAAAGAAGCTGAAAGTAGGGAAAATGAAAAAGAAAAaGAAAaGAAAAAaCAGAGAGAAGGTAAAAAAAAaGATGGTTGAACCTACCAGCACAGGAAAATGAAAATAAATGGCTTTAATATTGTCTCTTGAGAGTCATCCTGATAGGGTTGACAAAGATAAACCACCAGTTTGTTTTACTTATGCTAGAAGGAGGAGGCAGGAATTAGGAATCTAGATGAAGCTAATTCAATAGGGGTGAGCTTGTACTTGTAGAATTCGGATGGTTCTGTTAGTTTTCTGTACATCGAGAATTATGTAGATCAATGCAGATAGACAGTTCTCGCTTGGGAAGTTCTATCACATTATCAATTCTTTAATTAAGCTATGAAATTAGCTTCGTGCAATTGGAATTTCAATTTCCAACTCTGTACAATATCGTGACCCTACTAGTTGATCTTTCTACTTATTGAAATTGAATGCATATCCTGAAATTAGCTACGTGCTTAAGTACCCAACACTTACCTGATCTGCTTAGTGCAATTTTGAACTGTTATCTTATTTTTCTATTGTGCAGTCTCTTGAAATTCATTGGTCTATATTCTGTTGCAGCTGGAAGAACTTAAATGCTCACATAACATGACTGTAACATCTACTAAGGATACCACTGATGATGAGGAGGAGAATGATAAGCTATGAAGGACGAATGGAACTGCACATAGGAGGTTGATGGATTTTCTGTATAGTAGCCAAGAAAAAAaTGTGATATCTTATTCGTTAAAGGTATGTGAAGACCTTACGCTATGCATGTTTAAAGAGGAAAAAGGAAAATATTTGCTAAATAGTTGGATTGTATGAGGTGTGTATCTATCTTTTTACCTTTTATTTTTTGACTATGTTTGCGTTGAAAACTCTCACTTTAGTATGCGTGGTGATGTTTCAATGTTCATTTGAAAATGTAACTGACGATAATCTTTGTTGCTGAAACTGCCAT

mRNA sequence

AAATTCGGCCATGACCTAGATCAAACCGTGCAAATTGCAATGTTTTCTTTATAAATTTGTGACGCAGTTAATGAAAGTAGTAGTATCAATAGTGTGAGGAAACCATTCAATTTAGGAAATTCCCAGCATATGTAAACAATTCAGTAATGTTTTGGGCTATGATGAAGCTGAAACTCACCATCATGGCCCAAGGGAATCAATGGCAGCCGCTGTGCGGGTCAAAACTCAGACATATGCAGGCCCCGAAACCAATATTCTTGCGGCAATGGGGACGGATTCCATCAAACAATCATCAAATCGAACCCCCAACCAGCAAGCAACTGTGAAGGAGGAACCCCCATTTCTTCTCAATGGGACACAAAGAGGAAAAAGAAGCAAAGAAGGAAGCTTTCAGAAAGTATTTGGAGTCTAATGGCATTGTTGATGCTCTCACCAAAGTTCTGGTTGCATTGTATGAGCAAAATGACAAGCCTTCCTCTGCTCTCGAATTTATTCAACAAAGACTTGGGGGTCCATCTAAAGCTGAATATGAGAAGTTACAATCTGAGATGGCAGATTTGCAAGTCAAGTATGATGAGCTTCTAGCTACACACAAGGAAACCTGTAAAGAGCTGGAAGAACTTAAATGCTCACATAACATGACTGTAACATCTACTAAGGATACCACTGATGATGAGGAGGAGAATGATAAGCTATGAAGGACGAATGGAACTGCACATAGGAGGTTGATGGATTTTCTGTATAGTAGCCAAGAAAAAAATGTGATATCTTATTCGTTAAAGGTATGTGAAGACCTTACGCTATGCATGTTTAAAGAGGAAAAAGGAAAATATTTGCTAAATAGTTGGATTGTATGAGGTGTGTATCTATCTTTTTACCTTTTATTTTTTGACTATGTTTGCGTTGAAAACTCTCACTTTAGTATGCGTGGTGATGTTTCAATGTTCATTTGAAAATGTAACTGACGATAATCTTTGTTGCTGAAACTGCCAT

Coding sequence (CDS)

ATGGGACACAAAGAGGAAAAAGAAGCAAAGAAGGAAGCTTTCAGAAAGTATTTGGAGTCTAATGGCATTGTTGATGCTCTCACCAAAGTTCTGGTTGCATTGTATGAGCAAAATGACAAGCCTTCCTCTGCTCTCGAATTTATTCAACAAAGACTTGGGGGTCCATCTAAAGCTGAATATGAGAAGTTACAATCTGAGATGGCAGATTTGCAAGTCAAGTATGATGAGCTTCTAGCTACACACAAGGAAACCTGTAAAGAGCTGGAAGAACTTAAATGCTCACATAACATGACTGTAACATCTACTAAGGATACCACTGATGATGAGGAGGAGAATGATAAGCTATGA

Protein sequence

MGHKEEKEAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGGPSKAEYEKLQSEMADLQVKYDELLATHKETCKELEELKCSHNMTVTSTKDTTDDEEENDKL*

Homology

[Close]

BLAST of Cucsa.132920 vs. Swiss-Prot
Match: MYCBP_PONAB (C-Myc-binding protein OS=Pongo abelii GN=MYCBP PE=3 SV=3)

HSP 1 Score: 82.8 bits (203), Expect = 2.7e-15
Identity = 39/92 (42.39%), Postives = 65/92 (70.65%), Query Frame = 1


Query: 1  MGHKEEKEAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGG--PSKA 60
          M H +  ++K+E FR+YLE +G++D LTKVLVALYE+ +KP+SAL+F++  LG   P   
Sbjct: 1  MAHYKAADSKREQFRRYLEKSGVLDTLTKVLVALYEEPEKPNSALDFLKHHLGAATPENP 60

Query: 61 EYEKLQSEMADLQVKYDELLATHKETCKELEE 91
          E E L+ E+A+++ KY+ ++  +K+   +L +
Sbjct: 61 EIELLRLELAEIKEKYEAIVEENKKLKAKLAQ 92

[Close]

BLAST of Cucsa.132920 vs. Swiss-Prot
Match: MYCBP_HUMAN (C-Myc-binding protein OS=Homo sapiens GN=MYCBP PE=1 SV=3)

HSP 1 Score: 82.8 bits (203), Expect = 2.7e-15
Identity = 39/92 (42.39%), Postives = 65/92 (70.65%), Query Frame = 1


Query: 1  MGHKEEKEAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGG--PSKA 60
          M H +  ++K+E FR+YLE +G++D LTKVLVALYE+ +KP+SAL+F++  LG   P   
Sbjct: 1  MAHYKAADSKREQFRRYLEKSGVLDTLTKVLVALYEEPEKPNSALDFLKHHLGAATPENP 60

Query: 61 EYEKLQSEMADLQVKYDELLATHKETCKELEE 91
          E E L+ E+A+++ KY+ ++  +K+   +L +
Sbjct: 61 EIELLRLELAEMKEKYEAIVEENKKLKAKLAQ 92

[Close]

BLAST of Cucsa.132920 vs. Swiss-Prot
Match: MYCBP_BOVIN (C-Myc-binding protein OS=Bos taurus GN=MYCBP PE=3 SV=3)

HSP 1 Score: 82.8 bits (203), Expect = 2.7e-15
Identity = 39/92 (42.39%), Postives = 65/92 (70.65%), Query Frame = 1


Query: 1  MGHKEEKEAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGG--PSKA 60
          M H +  ++K+E FR+YLE +G++D LTKVLVALYE+ +KP+SAL+F++  LG   P   
Sbjct: 1  MAHYKAADSKREQFRRYLEKSGVLDTLTKVLVALYEEPEKPNSALDFLKHHLGAATPENP 60

Query: 61 EYEKLQSEMADLQVKYDELLATHKETCKELEE 91
          E E L+ E+A+++ KY+ ++  +K+   +L +
Sbjct: 61 EIELLRLELAEMKEKYEAIVEENKKLKTKLAQ 92

[Close]

BLAST of Cucsa.132920 vs. Swiss-Prot
Match: MYCBP_MOUSE (C-Myc-binding protein OS=Mus musculus GN=Mycbp PE=1 SV=5)

HSP 1 Score: 81.3 bits (199), Expect = 7.9e-15
Identity = 38/85 (44.71%), Postives = 61/85 (71.76%), Query Frame = 1


Query: 1  MGHKEEKEAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGG--PSKA 60
          M H +  ++K+E FR+YLE +G++D LTKVLVALYE+ +KP+SAL+F++  LG   P   
Sbjct: 1  MAHYKAADSKREQFRRYLEKSGVLDTLTKVLVALYEEPEKPTSALDFLKHHLGAATPENP 60

Query: 61 EYEKLQSEMADLQVKYDELLATHKE 84
          E E L+ E+A+++ KY+  +  +K+
Sbjct: 61 EIELLRLELAEMKEKYEATVEENKK 85

[Close]

BLAST of Cucsa.132920 vs. Swiss-Prot
Match: MYCBP_DICDI (C-Myc-binding protein homolog OS=Dictyostelium discoideum GN=mycbp PE=3 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 3.9e-14
Identity = 39/84 (46.43%), Postives = 56/84 (66.67%), Query Frame = 1


Query: 6  EKEAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGGPSKAEYEKLQS 65
          +  A+KE F+ YLE +G++DALTKVLV LYE++DKPS ALEFI++ LG     + + L+ 
Sbjct: 2  QNSAEKEEFKGYLEKSGVIDALTKVLVGLYEESDKPSDALEFIKKHLGNSLGIDVDALKQ 61

Query: 66 EMADLQVKYDELLATHKETCKELE 90
          E ADL+ +   L     +  K+LE
Sbjct: 62 ENADLKAEVSALTQRVDDLSKKLE 85

[Close]

BLAST of Cucsa.132920 vs. TrEMBL
Match: A0A0A0LL81_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G009580 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 3.4e-41
Identity = 86/93 (92.47%), Postives = 90/93 (96.77%), Query Frame = 1


Query: 23  IVDALTKVLVALYEQNDKPSSALEFIQQRLGGPSKAEYEKLQSEMADLQVKYDELLATHK 82
           +++   +VLVALYEQNDKPSSALEFIQQRLGGPSKAEYEKLQSEMADLQVKYDELLATHK
Sbjct: 49  LLNGTQRVLVALYEQNDKPSSALEFIQQRLGGPSKAEYEKLQSEMADLQVKYDELLATHK 108

Query: 83  ETCKELEELKCSHNMTVTSTKDTTDDEEENDKL 116
           ETCKELEELKCSHNMTVTSTKDTTDDEEENDKL
Sbjct: 109 ETCKELEELKCSHNMTVTSTKDTTDDEEENDKL 141

[Close]

BLAST of Cucsa.132920 vs. TrEMBL
Match: B9S7I6_RICCO (Associate of C-myc, putative OS=Ricinus communis GN=RCOM_0608060 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 2.4e-39
Identity = 84/115 (73.04%), Postives = 102/115 (88.70%), Query Frame = 1


Query: 1   MGHKEEKEAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGGPSKAEY 60
           M +KEEKEAKKEAFRKYLES+G++DALTKVLV+LYEQN+KPSSALEFIQQ+LGGPS +EY
Sbjct: 2   MRYKEEKEAKKEAFRKYLESSGVLDALTKVLVSLYEQNEKPSSALEFIQQKLGGPSLSEY 61

Query: 61  EKLQSEMADLQVKYDELLATHKETCKELEELKCSHNMTVTSTKDTTDDEEENDKL 116
           EKLQ+EM+DLQ+KY++L ATH+E CKELEELK  HN  +TST +TT+ E   D+L
Sbjct: 62  EKLQTEMSDLQIKYNDLSATHQEICKELEELKHLHN--ITSTTETTNSEATRDEL 114

[Close]

BLAST of Cucsa.132920 vs. TrEMBL
Match: A9PH87_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s02250g PE=2 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 3.2e-39
Identity = 86/114 (75.44%), Postives = 98/114 (85.96%), Query Frame = 1


Query: 1   MGHKEEKEAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGGPSKAEY 60
           M +KEEKEAKKEAFRKYLES+G++DALTKVLVALYEQNDKPSSALEFIQQ+LGGPS +EY
Sbjct: 2   MRYKEEKEAKKEAFRKYLESSGVLDALTKVLVALYEQNDKPSSALEFIQQKLGGPSLSEY 61

Query: 61  EKLQSEMADLQVKYDELLATHKETCKELEELKCSHNMTVTSTKDTTDDEEENDK 115
           EKLQ+EM++LQ KY +LL  H+ETCKELEELK SHN  V S  DTTD E   D+
Sbjct: 62  EKLQAEMSELQNKYGDLLGAHQETCKELEELKNSHN--VASATDTTDGEAPKDE 113

[Close]

BLAST of Cucsa.132920 vs. TrEMBL
Match: A0A0S3S511_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.05G133300 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 4.2e-39
Identity = 83/115 (72.17%), Postives = 98/115 (85.22%), Query Frame = 1


Query: 1   MGHKEEKEAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGGPSKAEY 60
           M +KEEKEAKKEAFRKYLE++G VDALTKVLVALYEQNDKPSSA+EFIQQ+L  PS +EY
Sbjct: 3   MRYKEEKEAKKEAFRKYLETSGAVDALTKVLVALYEQNDKPSSAVEFIQQKLSCPSISEY 62

Query: 61  EKLQSEMADLQVKYDELLATHKETCKELEELKCSHNMTVTSTKDTTDDEEENDKL 116
           EKLQ+E +DLQ+KY+ELLA H+ TCKELEE+K SH +   STK+TTD+E   D L
Sbjct: 63  EKLQAEFSDLQIKYNELLAAHQRTCKELEEIKSSHVLATVSTKETTDNESPKDGL 117

[Close]

BLAST of Cucsa.132920 vs. TrEMBL
Match: W9S6T9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_024541 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.2e-38
Identity = 80/111 (72.07%), Postives = 99/111 (89.19%), Query Frame = 1


Query: 5   EEKEAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGGPSKAEYEKLQ 64
           +EKEAKKEAFRKYLES+G++DALTKVLVALYEQNDKPSSALEFIQQ+LGGPS ++YEKLQ
Sbjct: 2   QEKEAKKEAFRKYLESSGVLDALTKVLVALYEQNDKPSSALEFIQQKLGGPSASDYEKLQ 61

Query: 65  SEMADLQVKYDELLATHKETCKELEELKCSHNMTVTSTKDTTDDEEENDKL 116
           +EM+DLQ KY++LLA H+E  KELEE+K SH+M  +S K+TTD E + ++L
Sbjct: 62  AEMSDLQTKYNQLLAAHQEISKELEEVKSSHDMAPSSAKETTDGEPQKERL 112

[Close]

BLAST of Cucsa.132920 vs. TAIR10
Match: AT2G14045.1 (AT2G14045.1 unknown protein)

HSP 1 Score: 148.7 bits (374), Expect = 2.3e-36
Identity = 74/109 (67.89%), Postives = 92/109 (84.40%), Query Frame = 1


Query: 1   MGHKEEKEAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGGPSKAEY 60
           M +KEEKE KKEAFRKYLES+G++D+LTKVLV+LYEQNDKPSSALEFIQQ+LGGPS ++Y
Sbjct: 2   MRYKEEKEVKKEAFRKYLESSGVLDSLTKVLVSLYEQNDKPSSALEFIQQKLGGPSVSDY 61

Query: 61  EKLQSEMADLQVKYDELLATHKETCKELEELKCSHNMTVTSTKDTTDDE 110
           EKLQ+E +DLQ+KY+ELLA H+ET +EL  +K  H+    S+KD  D E
Sbjct: 62  EKLQAEKSDLQIKYNELLAKHQETLRELNGVKSLHSR--NSSKDDADRE 108

[Close]

BLAST of Cucsa.132920 vs. NCBI nr
Match: gi|449442969|ref|XP_004139253.1| (PREDICTED: C-Myc-binding protein homolog [Cucumis sativus])

HSP 1 Score: 230.7 bits (587), Expect = 1.3e-57
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 1


Query: 1   MGHKEEKEAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGGPSKAEY 60
           MGHKEEKEAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGGPSKAEY
Sbjct: 1   MGHKEEKEAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGGPSKAEY 60

Query: 61  EKLQSEMADLQVKYDELLATHKETCKELEELKCSHNMTVTSTKDTTDDEEENDKL 116
           EKLQSEMADLQVKYDELLATHKETCKELEELKCSHNMTVTSTKDTTDDEEENDKL
Sbjct: 61  EKLQSEMADLQVKYDELLATHKETCKELEELKCSHNMTVTSTKDTTDDEEENDKL 115

[Close]

BLAST of Cucsa.132920 vs. NCBI nr
Match: gi|659070739|ref|XP_008456430.1| (PREDICTED: C-Myc-binding protein homolog [Cucumis melo])

HSP 1 Score: 224.2 bits (570), Expect = 1.2e-55
Identity = 112/115 (97.39%), Postives = 114/115 (99.13%), Query Frame = 1


Query: 1   MGHKEEKEAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGGPSKAEY 60
           MGHKEEKEAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGGPSKAEY
Sbjct: 1   MGHKEEKEAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGGPSKAEY 60

Query: 61  EKLQSEMADLQVKYDELLATHKETCKELEELKCSHNMTVTSTKDTTDDEEENDKL 116
           EKLQSEMADLQVKYDELLATHKETCKELEELK SHN+TVTSTKDTTDDE+ENDKL
Sbjct: 61  EKLQSEMADLQVKYDELLATHKETCKELEELKSSHNITVTSTKDTTDDEDENDKL 115

[Close]

BLAST of Cucsa.132920 vs. NCBI nr
Match: gi|700205652|gb|KGN60771.1| (hypothetical protein Csa_2G009580 [Cucumis sativus])

HSP 1 Score: 175.6 bits (444), Expect = 4.9e-41
Identity = 86/93 (92.47%), Postives = 90/93 (96.77%), Query Frame = 1


Query: 23  IVDALTKVLVALYEQNDKPSSALEFIQQRLGGPSKAEYEKLQSEMADLQVKYDELLATHK 82
           +++   +VLVALYEQNDKPSSALEFIQQRLGGPSKAEYEKLQSEMADLQVKYDELLATHK
Sbjct: 49  LLNGTQRVLVALYEQNDKPSSALEFIQQRLGGPSKAEYEKLQSEMADLQVKYDELLATHK 108

Query: 83  ETCKELEELKCSHNMTVTSTKDTTDDEEENDKL 116
           ETCKELEELKCSHNMTVTSTKDTTDDEEENDKL
Sbjct: 109 ETCKELEELKCSHNMTVTSTKDTTDDEEENDKL 141

[Close]

BLAST of Cucsa.132920 vs. NCBI nr
Match: gi|743917862|ref|XP_011002925.1| (PREDICTED: C-Myc-binding protein homolog [Populus euphratica])

HSP 1 Score: 170.2 bits (430), Expect = 2.1e-39
Identity = 87/113 (76.99%), Postives = 97/113 (85.84%), Query Frame = 1


Query: 1   MGHKEEKEAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGGPSKAEY 60
           M +KEEKEAKKEAFRKYLES+G+VDALTKVLVALYEQNDKPSSALEFIQQ+LGGPS +EY
Sbjct: 2   MRYKEEKEAKKEAFRKYLESSGVVDALTKVLVALYEQNDKPSSALEFIQQKLGGPSLSEY 61

Query: 61  EKLQSEMADLQVKYDELLATHKETCKELEELKCSHNMTVTSTKDTTDDEEEND 114
           EKLQ+EM++LQ KY +LL  H+ETCKELEELK SHN  V S  DTTD E   D
Sbjct: 62  EKLQAEMSELQNKYSDLLGAHQETCKELEELKNSHN--VASATDTTDGEAPKD 112

[Close]

BLAST of Cucsa.132920 vs. NCBI nr
Match: gi|255561893|ref|XP_002521955.1| (PREDICTED: C-Myc-binding protein homolog isoform X1 [Ricinus communis])

HSP 1 Score: 169.5 bits (428), Expect = 3.5e-39
Identity = 84/115 (73.04%), Postives = 102/115 (88.70%), Query Frame = 1


Query: 1   MGHKEEKEAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGGPSKAEY 60
           M +KEEKEAKKEAFRKYLES+G++DALTKVLV+LYEQN+KPSSALEFIQQ+LGGPS +EY
Sbjct: 2   MRYKEEKEAKKEAFRKYLESSGVLDALTKVLVSLYEQNEKPSSALEFIQQKLGGPSLSEY 61

Query: 61  EKLQSEMADLQVKYDELLATHKETCKELEELKCSHNMTVTSTKDTTDDEEENDKL 116
           EKLQ+EM+DLQ+KY++L ATH+E CKELEELK  HN  +TST +TT+ E   D+L
Sbjct: 62  EKLQTEMSDLQIKYNDLSATHQEICKELEELKHLHN--ITSTTETTNSEATRDEL 114

The following BLAST results are available for this feature:

BLAST of Cucsa.132920 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MYCBP_PONAB	2.7e-15	42.39	C-Myc-binding protein OS=Pongo abelii GN=MYCBP PE=3 SV=3	[more]
MYCBP_HUMAN	2.7e-15	42.39	C-Myc-binding protein OS=Homo sapiens GN=MYCBP PE=1 SV=3	[more]
MYCBP_BOVIN	2.7e-15	42.39	C-Myc-binding protein OS=Bos taurus GN=MYCBP PE=3 SV=3	[more]
MYCBP_MOUSE	7.9e-15	44.71	C-Myc-binding protein OS=Mus musculus GN=Mycbp PE=1 SV=5	[more]
MYCBP_DICDI	3.9e-14	46.43	C-Myc-binding protein homolog OS=Dictyostelium discoideum GN=mycbp PE=3 SV=1	[more]

BLAST of Cucsa.132920 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LL81_CUCSA	3.4e-41	92.47	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G009580 PE=4 SV=1	[more]
B9S7I6_RICCO	2.4e-39	73.04	Associate of C-myc, putative OS=Ricinus communis GN=RCOM_0608060 PE=4 SV=1	[more]
A9PH87_POPTR	3.2e-39	75.44	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s02250g PE=2 SV=1	[more]
A0A0S3S511_PHAAN	4.2e-39	72.17	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.05G133300 PE=...	[more]
W9S6T9_9ROSA	1.2e-38	72.07	Uncharacterized protein OS=Morus notabilis GN=L484_024541 PE=4 SV=1	[more]

BLAST of Cucsa.132920 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G14045.1	2.3e-36	67.89	unknown protein	[more]

BLAST of Cucsa.132920 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449442969\|ref\|XP_004139253.1\|	1.3e-57	100.00	PREDICTED: C-Myc-binding protein homolog [Cucumis sativus]	[more]
gi\|659070739\|ref\|XP_008456430.1\|	1.2e-55	97.39	PREDICTED: C-Myc-binding protein homolog [Cucumis melo]	[more]
gi\|700205652\|gb\|KGN60771.1\|	4.9e-41	92.47	hypothetical protein Csa_2G009580 [Cucumis sativus]	[more]
gi\|743917862\|ref\|XP_011002925.1\|	2.1e-39	76.99	PREDICTED: C-Myc-binding protein homolog [Populus euphratica]	[more]
gi\|255561893\|ref\|XP_002521955.1\|	3.5e-39	73.04	PREDICTED: C-Myc-binding protein homolog isoform X1 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR026060	AMY1

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0003713	transcription coactivator activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003713	transcription coactivator activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.132920.1	Cucsa.132920.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026060	Associate of Myc 1	PANTHER	PTHR13168	ASSOCIATE OF C-MYC AMY-1	coord: 1..92 score: 2.5
None	No IPR available	unknown	Coil	Coil	coord: 60..80 scor
None	No IPR available	PRINTS	PR02028	CMYCBINDINGP	coord: 32..46 score: 8.4E-16coord: 18..32 score: 8.4E-16coord: 8..18 score: 8.4
None	No IPR available	PANTHER	PTHR13168:SF0	C-MYC-BINDING PROTEIN	coord: 1..92 score: 2.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.132920	Cla013623	Watermelon (97103) v1	cgywmB223
Cucsa.132920	Csa2G009580	Cucumber (Chinese Long) v2	cgycuB184
Cucsa.132920	MELO3C004419	Melon (DHL92) v3.5.1	cgymeB216
Cucsa.132920	ClCG02G016980	Watermelon (Charleston Gray)	cgywcgB218
Cucsa.132920	CSPI02G02600	Wild cucumber (PI 183967)	cgycpiB187
Cucsa.132920	CmaCh12G011470	Cucurbita maxima (Rimu)	cgycmaB0364
Cucsa.132920	CmoCh12G011680	Cucurbita moschata (Rifu)	cgycmoB0359
Cucsa.132920	Lsi11G004110	Bottle gourd (USVL1VR-Ls)	cgylsiB205
Cucsa.132920	Cp4.1LG07g09700	Cucurbita pepo (Zucchini)	cgycpeB0356
Cucsa.132920	MELO3C004419.2	Melon (DHL92) v3.6.1	cgymedB213
Cucsa.132920	CsaV3_2G003760	Cucumber (Chinese Long) v3	cgycucB190
Cucsa.132920	Cla97C02G042720	Watermelon (97103) v2	cgywmbB213
Cucsa.132920	Bhi06G001555	Wax gourd	cgywgoB251
Cucsa.132920	Carg17438	Silver-seed gourd	carcgyB0300

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.132920	Cucurbita pepo (Zucchini)	cgycpeB0351
Cucsa.132920	Silver-seed gourd	carcgyB0883
Cucsa.132920	Silver-seed gourd	carcgyB1188
Cucsa.132920	Wax gourd	cgywgoB250
Cucsa.132920	Cucurbita maxima (Rimu)	cgycmaB0365
Cucsa.132920	Cucurbita moschata (Rifu)	cgycmoB0362