Cucsa.132920.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAATTCGGCCATGACCTAGATCAAACCGTGCAAATTGCAATGTTTTCTTTATAAATTTGTGACGCAGTTAATGAAAGTAGTAGTATCAATAGTGTGAGGAAACCATTCAATTTAGGAAATTCCCAGCATATGTAAACAATTCAGTAATGTTTTGGGCTATGATGAAGCTGAAACTCACCATCATGGCCCAAGGGAATCAATGGCAGCCGCTGTGCGGGTCAAAACTCAGACATATGCAGGCCCCGAAACCAATATTCTTGCGGCAATGGGGACGGATTCCATCAAACAATCATCAAATCGAACCCCcAACCAGCAAGCAACTGTGAAGGAGGAACCCCCATTTCTTCTCAATGGGACACAAAGAGGTCAGATCTATTTTCCCATTTTTGTTCTCAACTTATTCCGAGTTATTCCTCTTTTCGTTTCTTTCTATGGAAATTGACAACCCCATTTGTTGAATCGCTTCATCTTTGTTATAATTCCAACCCCTTTTCTGCGATTTAGGAAAAAGAAGCAAAGAAGGAAGCTTTCAGAAAGTATTTGGAGTCTAATGGCATTGTTGATGCTCTCACCAAAGGTTGTTTATCGCCATTTCTCAGCTTCTTCGCTCTCTGTTTTTCTTTTTCTTGAGAATTCTACCACTTTATCTATGCATTCGAATTTTGATACGTTTTCTATTTTGCATTTCTTTTACTGGGTTGAAGTTCTGGTTGCATTGTATGAGCAAAATGACAAGCCTTCCTCTGCTCTCGAGTAAGTTCTTTCTTTTTGTTTtGGGTTTGATCACGTTCTTATGCTTTGCTTGCTGCAGTGATTGTCGGAGATCAATAGTTGAGGTTAACCGTGGTTGTAGCTATTTAATTTTGCTGCTAGCTGGTTTTTCATTGAGGATAATGTCTTTCCTGAATCCTGTTTGTTTTATTTTCAAGCATATCAAATCTCAGTTACAAGCTGTCAAAACAAAGTTATTTCAACTGCGTTTAAATCTTATTTTGCCCCCTTAACGCTTCTTTTATTTCAATTTCATATCCATTTATCAGTTACTGATAGATAATATCACGATTCCTTATCCGAAATTTGGGTCTGATTGACACGTAATTGGATTAGTTTCGTTTTTCAAATTTCATAGAAAGTCGTGAAGAAAACTACAAAAGCAATTTTTTAAGTATTCCAAAAATGTATGTATTTATAGGTCTAATAAACTACAAGGCGTTGTTATGTTAGAGATAAATATTGTCAACAAGAGGTTTCTTATGAAAGTTATCGTTTACTTTTGCTTGTAATTTGATATGTCAAAAAaTATAGTTTTCTTTTTCTTTCTTTCTTTCTTAAATAAAGAAAATTTGAAACGGATAATTTTATTCAAGATAATAAAATTATACAAAACTTTCCTAGGAGTTCATAATAGCAAATTCCCATTGGAAGTAACCGTTGATAGACTTTCTTTTtCCTTTTtATCTGACAGATTTATTCAACAAAGACTTGGGGGTCCATCTAAAGCTGAATATGAGAAGTTACAATCTGAGATGGCAGATTTGCAAGTCAAGTATGATGAGCTTCTAGCTACACACAAGGAAACCTGTAAAGAGGTAGTGTCGAATTGAAGTTATCTGACTCGATGCTATTCCTTGTTAAGAATACGTGTAATGGGTAAAATATATTCTAAACTATGAGTCTATACTTTTGGGTTAAGTGGTAACTTGATATGATAAGACACACAAAAATGTAGTGGTCTCAGGCTTAAGCATGAAGAGAAAAAaTATAATAAATTAGATCTTTTGTAGGTGACCATTTAATTAGGTTGTTGGAAGATATTTCTTAACTTCTTCCAAAATATTTTTAAAATAATAAACTAAAAAaTGACAAGACACAAGAGTGTACTTTCTTATATATTTATGTATTGTCTACCACATCAACTAGCATGATTAGTTGATCAAGTTGTGCAGTTAAAATGTTGAAGGACAAGCAAAGAAGCTGAAAGTAGGGAAAATGAAAAAGAAAAaGAAAaGAAAAAaCAGAGAGAAGGTAAAAAAAAaGATGGTTGAACCTACCAGCACAGGAAAATGAAAATAAATGGCTTTAATATTGTCTCTTGAGAGTCATCCTGATAGGGTTGACAAAGATAAACCACCAGTTTGTTTTACTTATGCTAGAAGGAGGAGGCAGGAATTAGGAATCTAGATGAAGCTAATTCAATAGGGGTGAGCTTGTACTTGTAGAATTCGGATGGTTCTGTTAGTTTTCTGTACATCGAGAATTATGTAGATCAATGCAGATAGACAGTTCTCGCTTGGGAAGTTCTATCACATTATCAATTCTTTAATTAAGCTATGAAATTAGCTTCGTGCAATTGGAATTTCAATTTCCAACTCTGTACAATATCGTGACCCTACTAGTTGATCTTTCTACTTATTGAAATTGAATGCATATCCTGAAATTAGCTACGTGCTTAAGTACCCAACACTTACCTGATCTGCTTAGTGCAATTTTGAACTGTTATCTTATTTTTCTATTGTGCAGTCTCTTGAAATTCATTGGTCTATATTCTGTTGCAGCTGGAAGAACTTAAATGCTCACATAACATGACTGTAACATCTACTAAGGATACCACTGATGATGAGGAGGAGAATGATAAGCTATGAAGGACGAATGGAACTGCACATAGGAGGTTGATGGATTTTCTGTATAGTAGCCAAGAAAAAAaTGTGATATCTTATTCGTTAAAGGTATGTGAAGACCTTACGCTATGCATGTTTAAAGAGGAAAAAGGAAAATATTTGCTAAATAGTTGGATTGTATGAGGTGTGTATCTATCTTTTTACCTTTTATTTTTTGACTATGTTTGCGTTGAAAACTCTCACTTTAGTATGCGTGGTGATGTTTCAATGTTCATTTGAAAATGTAACTGACGATAATCTTTGTTGCTGAAACTGCCAT AAATTCGGCCATGACCTAGATCAAACCGTGCAAATTGCAATGTTTTCTTTATAAATTTGTGACGCAGTTAATGAAAGTAGTAGTATCAATAGTGTGAGGAAACCATTCAATTTAGGAAATTCCCAGCATATGTAAACAATTCAGTAATGTTTTGGGCTATGATGAAGCTGAAACTCACCATCATGGCCCAAGGGAATCAATGGCAGCCGCTGTGCGGGTCAAAACTCAGACATATGCAGGCCCCGAAACCAATATTCTTGCGGCAATGGGGACGGATTCCATCAAACAATCATCAAATCGAACCCCCAACCAGCAAGCAACTGTGAAGGAGGAACCCCCATTTCTTCTCAATGGGACACAAAGAGGAAAAAGAAGCAAAGAAGGAAGCTTTCAGAAAGTATTTGGAGTCTAATGGCATTGTTGATGCTCTCACCAAAGTTCTGGTTGCATTGTATGAGCAAAATGACAAGCCTTCCTCTGCTCTCGAATTTATTCAACAAAGACTTGGGGGTCCATCTAAAGCTGAATATGAGAAGTTACAATCTGAGATGGCAGATTTGCAAGTCAAGTATGATGAGCTTCTAGCTACACACAAGGAAACCTGTAAAGAGCTGGAAGAACTTAAATGCTCACATAACATGACTGTAACATCTACTAAGGATACCACTGATGATGAGGAGGAGAATGATAAGCTATGAAGGACGAATGGAACTGCACATAGGAGGTTGATGGATTTTCTGTATAGTAGCCAAGAAAAAAATGTGATATCTTATTCGTTAAAGGTATGTGAAGACCTTACGCTATGCATGTTTAAAGAGGAAAAAGGAAAATATTTGCTAAATAGTTGGATTGTATGAGGTGTGTATCTATCTTTTTACCTTTTATTTTTTGACTATGTTTGCGTTGAAAACTCTCACTTTAGTATGCGTGGTGATGTTTCAATGTTCATTTGAAAATGTAACTGACGATAATCTTTGTTGCTGAAACTGCCAT ATGGGACACAAAGAGGAAAAAGAAGCAAAGAAGGAAGCTTTCAGAAAGTATTTGGAGTCTAATGGCATTGTTGATGCTCTCACCAAAGTTCTGGTTGCATTGTATGAGCAAAATGACAAGCCTTCCTCTGCTCTCGAATTTATTCAACAAAGACTTGGGGGTCCATCTAAAGCTGAATATGAGAAGTTACAATCTGAGATGGCAGATTTGCAAGTCAAGTATGATGAGCTTCTAGCTACACACAAGGAAACCTGTAAAGAGCTGGAAGAACTTAAATGCTCACATAACATGACTGTAACATCTACTAAGGATACCACTGATGATGAGGAGGAGAATGATAAGCTATGA MGHKEEKEAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGGPSKAEYEKLQSEMADLQVKYDELLATHKETCKELEELKCSHNMTVTSTKDTTDDEEENDKL*
BLAST of Cucsa.132920.1 vs. Swiss-Prot
Match: MYCBP_PONAB (C-Myc-binding protein OS=Pongo abelii GN=MYCBP PE=3 SV=3) HSP 1 Score: 82.8 bits (203), Expect = 2.7e-15 Identity = 39/92 (42.39%), Postives = 65/92 (70.65%), Query Frame = 1
BLAST of Cucsa.132920.1 vs. Swiss-Prot
Match: MYCBP_HUMAN (C-Myc-binding protein OS=Homo sapiens GN=MYCBP PE=1 SV=3) HSP 1 Score: 82.8 bits (203), Expect = 2.7e-15 Identity = 39/92 (42.39%), Postives = 65/92 (70.65%), Query Frame = 1
BLAST of Cucsa.132920.1 vs. Swiss-Prot
Match: MYCBP_BOVIN (C-Myc-binding protein OS=Bos taurus GN=MYCBP PE=3 SV=3) HSP 1 Score: 82.8 bits (203), Expect = 2.7e-15 Identity = 39/92 (42.39%), Postives = 65/92 (70.65%), Query Frame = 1
BLAST of Cucsa.132920.1 vs. Swiss-Prot
Match: MYCBP_MOUSE (C-Myc-binding protein OS=Mus musculus GN=Mycbp PE=1 SV=5) HSP 1 Score: 81.3 bits (199), Expect = 7.9e-15 Identity = 38/85 (44.71%), Postives = 61/85 (71.76%), Query Frame = 1
BLAST of Cucsa.132920.1 vs. Swiss-Prot
Match: MYCBP_DICDI (C-Myc-binding protein homolog OS=Dictyostelium discoideum GN=mycbp PE=3 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 3.9e-14 Identity = 39/84 (46.43%), Postives = 56/84 (66.67%), Query Frame = 1
BLAST of Cucsa.132920.1 vs. TrEMBL
Match: A0A0A0LL81_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G009580 PE=4 SV=1) HSP 1 Score: 175.6 bits (444), Expect = 3.4e-41 Identity = 86/93 (92.47%), Postives = 90/93 (96.77%), Query Frame = 1
BLAST of Cucsa.132920.1 vs. TrEMBL
Match: B9S7I6_RICCO (Associate of C-myc, putative OS=Ricinus communis GN=RCOM_0608060 PE=4 SV=1) HSP 1 Score: 169.5 bits (428), Expect = 2.4e-39 Identity = 84/115 (73.04%), Postives = 102/115 (88.70%), Query Frame = 1
BLAST of Cucsa.132920.1 vs. TrEMBL
Match: A9PH87_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s02250g PE=2 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 3.2e-39 Identity = 86/114 (75.44%), Postives = 98/114 (85.96%), Query Frame = 1
BLAST of Cucsa.132920.1 vs. TrEMBL
Match: A0A0S3S511_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.05G133300 PE=4 SV=1) HSP 1 Score: 168.7 bits (426), Expect = 4.2e-39 Identity = 83/115 (72.17%), Postives = 98/115 (85.22%), Query Frame = 1
BLAST of Cucsa.132920.1 vs. TrEMBL
Match: W9S6T9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_024541 PE=4 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 1.2e-38 Identity = 80/111 (72.07%), Postives = 99/111 (89.19%), Query Frame = 1
BLAST of Cucsa.132920.1 vs. TAIR10
Match: AT2G14045.1 (AT2G14045.1 unknown protein) HSP 1 Score: 148.7 bits (374), Expect = 2.3e-36 Identity = 74/109 (67.89%), Postives = 92/109 (84.40%), Query Frame = 1
BLAST of Cucsa.132920.1 vs. NCBI nr
Match: gi|449442969|ref|XP_004139253.1| (PREDICTED: C-Myc-binding protein homolog [Cucumis sativus]) HSP 1 Score: 230.7 bits (587), Expect = 1.3e-57 Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 1
BLAST of Cucsa.132920.1 vs. NCBI nr
Match: gi|659070739|ref|XP_008456430.1| (PREDICTED: C-Myc-binding protein homolog [Cucumis melo]) HSP 1 Score: 224.2 bits (570), Expect = 1.2e-55 Identity = 112/115 (97.39%), Postives = 114/115 (99.13%), Query Frame = 1
BLAST of Cucsa.132920.1 vs. NCBI nr
Match: gi|700205652|gb|KGN60771.1| (hypothetical protein Csa_2G009580 [Cucumis sativus]) HSP 1 Score: 175.6 bits (444), Expect = 4.9e-41 Identity = 86/93 (92.47%), Postives = 90/93 (96.77%), Query Frame = 1
BLAST of Cucsa.132920.1 vs. NCBI nr
Match: gi|743917862|ref|XP_011002925.1| (PREDICTED: C-Myc-binding protein homolog [Populus euphratica]) HSP 1 Score: 170.2 bits (430), Expect = 2.1e-39 Identity = 87/113 (76.99%), Postives = 97/113 (85.84%), Query Frame = 1
BLAST of Cucsa.132920.1 vs. NCBI nr
Match: gi|255561893|ref|XP_002521955.1| (PREDICTED: C-Myc-binding protein homolog isoform X1 [Ricinus communis]) HSP 1 Score: 169.5 bits (428), Expect = 3.5e-39 Identity = 84/115 (73.04%), Postives = 102/115 (88.70%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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