CmoCh12G011680 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh12G011680
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	C-Myc-binding
Location	Cmo_Chr12 : 10570903 .. 10573671 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAAACTCACGATCATGGGCCACGGTAATCGAAGGCTCAAGTCGCTATGCGGGGCAAAGCTCAGACACCTGCAGGCCCCTAAACCAATATTCTTGCGAAAATGGGGACGGATTCCATCAAACAATCGCACACCCAACCAGCAAGCAACTGTGGAGGAGGAACCTCCGTTTCTTCCCCATGGGACACATCCAGGTCAGATCTAGCGAAATCGACACACCCAATTGCTTGAATCGCTCTATCTTGTTCATAATTCGAACCCCTTTTTCTGCGATTTAGGAAAAAGAAGCGAAGAAGGAAGCATTTAGGAAGTATTTGGAGTCTAATGGCGTTGTTGATGCTCTCACCAAAGGTTGATTCTCACCATTTCTCTGCTTCAATCCGTATTGCGTTTGAATTTTGATACATTTTCTTTTCTGCGTTCTTTTGCTGGTTGAAGTTCTGGTTGCGTTGTTTGAGCAACACGATAAGCCTTCCTCTGCTCTCGAGTAAGTTCTTGCTTTGAGCTTTTGATAGGTGAAGTTAACCATTGTTCTAGCTATTAATTTTGCACCTAATATCTCGTTTGGCTGTTAGACGAACACGACTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAACCTCTCGTGGCTTTGCTTTGGGCTTCCCCAAAAAGCCTCGTACCAATGGAGAGAGTATTCGTTGATTATAAACCCATGATCATTCCCTAAATTAGCCTATGTGTGACTTTCATTATCAAATCTCATAATGTTCTACTAATATCGTCCAATCAATAGTTGATCTTAGTTACAAGCTGTCTAAACAATGTTTTTATCTTATTTTGATTCCTAAACTTTAGTTTCGGGCCATTTTCAAATCCTTTAATCACTTTCTTATTGAAAATAATGGCATGATTCATTCGAATTCTGGTCTGTTTGAGCTTGAGGAGGTTGGATTAGTTTCGTTTTTCTGAATTATTTGAAAGTTGTGAGGAGATTTCAAATCTTTCTCCTTCTGAATCCTGTCAAGCATTCAATCAAAGCATGTTTTATGTTTAGAAAGTCAAACAATAAACTACAAGGTGTTTGCCATGTTAGAAATTTTGTGAGATCCCACGTCGGTGGGAGAGGAGAACGAAGCATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGTAGATGCGTTTTAAAAACCTTGAGGGGAGGTCCAAAGAGGACAATATCTGCTAGATGTGGGCTTGGGCTGATATAAATAGTATTGTATCAAAGCCAGGCACCGGGCGATGTGCCAGTGAGGAGGGTGAGCCTTGAAGGGGGGTGGTGGACATGAGGCGGTGTGCCAACAAGGACGCTGGGCACCAAAGGGGGTGGATTGGAGGGGTATTGGAGAAAGAAGCATTCTTTATAAGGGTTCTGAGATCCCACATCTGTTGGGGAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACTTCTTTATAGCAGACGCGTTTTAAAAACCTTGTGGGGAAACTCGAAAGGGAAAGCCCAAAAAGGACAATATCTGCTACGATGGGCTTGAGTCATTACAGAACGAGTGCCAGCGAGGATGCTGGTTCCCGAAGGGGGTGGATTGTGAGATTCCACATCGGTTGGGGAGGAGAATGAAGCCTTCTTTATAAGGGTGTGGAAACTTCTCCATAGTAGACCGTGTTTTCAAAACCTTGAGGGGAAACCCAAAAGGGAAAGCCCAAAGAGGACAATATCTGCTACGGTGGGCTTGGGTCATTACAACACGAGTGCCAGTGAGGACGCTGGTCCTCGAAGGGGGGTGGATTGTGAGATTCCACATCGGTTGGGGAGGAGAATGAAGCCTTCTTTATAAGGGTGTGGAAACTTCTCCATAGCAGACCGTGTTTTCAAAACCTTGAGGGGAAACCTAAAAGGGAAAGGCTAAAGAGGACAATATTTGGTACGGTGGGTTTTGGCCATTACTTATTCTCAACTAGAGTTTTCTTGTGAAAGTTATCATTTACTGTTGCTTGTAATTTGAAATGCTCAAGAAGTGTAGTTTTCTTCTTCTTCCTTTCTAAAAATAAATGAATGATTTTATTGAAGAGAACATTCCGATAGGAAGCACTATTGATAGACTTTTTTTCTTTTACTCTCACAGATTTATTCAACAAAGACTAGGCGGTCCATCTATAGCTGAATACGAGAAGTTACAATCCGAGATGGCGGATTTGCAAGTCAAGTATGACGAGCTTTTAGCTACCCACAAGGAAACCTGTAAAGAGGTAGCGTTGAAATTATCGGACTCGATACTATTACACGTTGTTAAGAATATATGTAATGAATAAGTATATCGTGTTGCAGTTGGAAGGACTTAAAAGTTTGCATAACGTCACGGCAATGTCTACCAAGGATACCACTGATGACGAGGAGGAAAACGATAAGGTATGAAGGGCTAATTGAGTTGCACATAGGAGGTTGATGGATTTTCTATATGACTGCCAAGAAAAAGAAAGTGATATCTATTTCCTTTAAGGTATGTGAAGATCTTACGCTATGAACGTTAAAAAGTTGAATTGTATGAAGACCATTCATCTTTTTACCTTTGATTCTTTGACATTGTTTGCTTTTGATAACTCTCACTTTAGTTCTAGTTTTGGTGTGATGTTTTTAGTGTACATTCGAAAATGAAACGGAAAACGTGCATGTGCCATGGAAAGAACATAACTATAATCTCCTTTGCTGAAACCCTCATGGACCAGCTCAAGCCCACCGCTAGCAAATATTATCCTCGTT

mRNA sequence

ATGGCGAAACTCACGATCATGGGCCACGGTAATCGAAGGCTCAAGTCGCTATGCGGGGCAAAGCTCAGACACCTGCAGGCCCCTAAACCAATATTCTTGCGAAAATGGGGACGGATTCCATCAAACAATCGCACACCCAACCAGCAAGCAACTGTGGAGGAGGAACCTCCGTTTCTTCCCCATGGGACACATCCAGGAAAAAGAAGCGAAGAAGGAAGCATTTAGGAAGTATTTGGAGTCTAATGGCGTTGTTGATGCTCTCACCAAAGTTCTGGTTGCGTTGTTTGAGCAACACGATAAGCCTTCCTCTGCTCTCGAATTTATTCAACAAAGACTAGGCGGTCCATCTATAGCTGAATACGAGAAGTTACAATCCGAGATGGCGGATTTGCAAGTCAAGTATGACGAGCTTTTAGCTACCCACAAGGAAACCTGTAAAGAGTTGGAAGGACTTAAAAGTTTGCATAACGTCACGGCAATGTCTACCAAGGATACCACTGATGACGAGGAGGAAAACGATAAGGTATGAAGGGCTAATTGAGTTGCACATAGGAGGTTGATGGATTTTCTATATGACTGCCAAGAAAAAGAAAGTGATATCTATTTCCTTTAAGGTATGTGAAGATCTTACGCTATGAACGTTAAAAAGTTGAATTGTATGAAGACCATTCATCTTTTTACCTTTGATTCTTTGACATTGTTTGCTTTTGATAACTCTCACTTTAGTTCTAGTTTTGGTGTGATGTTTTTAGTGTACATTCGAAAATGAAACGGAAAACGTGCATGTGCCATGGAAAGAACATAACTATAATCTCCTTTGCTGAAACCCTCATGGACCAGCTCAAGCCCACCGCTAGCAAATATTATCCTCGTT

Coding sequence (CDS)

ATGGGACACATCCAGGAAAAAGAAGCGAAGAAGGAAGCATTTAGGAAGTATTTGGAGTCTAATGGCGTTGTTGATGCTCTCACCAAAGTTCTGGTTGCGTTGTTTGAGCAACACGATAAGCCTTCCTCTGCTCTCGAATTTATTCAACAAAGACTAGGCGGTCCATCTATAGCTGAATACGAGAAGTTACAATCCGAGATGGCGGATTTGCAAGTCAAGTATGACGAGCTTTTAGCTACCCACAAGGAAACCTGTAAAGAGTTGGAAGGACTTAAAAGTTTGCATAACGTCACGGCAATGTCTACCAAGGATACCACTGATGACGAGGAGGAAAACGATAAGGTATGA

Homology

[Close]

BLAST of CmoCh12G011680 vs. Swiss-Prot
Match: MYCBP_PONAB (C-Myc-binding protein OS=Pongo abelii GN=MYCBP PE=3 SV=3)

HSP 1 Score: 79.3 bits (194), Expect = 3.0e-14
Identity = 38/85 (44.71%), Postives = 62/85 (72.94%), Query Frame = 1


Query: 1  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGG--PSIA 60
          M H +  ++K+E FR+YLE +GV+D LTKVLVAL+E+ +KP+SAL+F++  LG   P   
Sbjct: 1  MAHYKAADSKREQFRRYLEKSGVLDTLTKVLVALYEEPEKPNSALDFLKHHLGAATPENP 60

Query: 61 EYEKLQSEMADLQVKYDELLATHKE 84
          E E L+ E+A+++ KY+ ++  +K+
Sbjct: 61 EIELLRLELAEIKEKYEAIVEENKK 85

[Close]

BLAST of CmoCh12G011680 vs. Swiss-Prot
Match: MYCBP_HUMAN (C-Myc-binding protein OS=Homo sapiens GN=MYCBP PE=1 SV=3)

HSP 1 Score: 79.3 bits (194), Expect = 3.0e-14
Identity = 38/85 (44.71%), Postives = 62/85 (72.94%), Query Frame = 1


Query: 1  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGG--PSIA 60
          M H +  ++K+E FR+YLE +GV+D LTKVLVAL+E+ +KP+SAL+F++  LG   P   
Sbjct: 1  MAHYKAADSKREQFRRYLEKSGVLDTLTKVLVALYEEPEKPNSALDFLKHHLGAATPENP 60

Query: 61 EYEKLQSEMADLQVKYDELLATHKE 84
          E E L+ E+A+++ KY+ ++  +K+
Sbjct: 61 EIELLRLELAEMKEKYEAIVEENKK 85

[Close]

BLAST of CmoCh12G011680 vs. Swiss-Prot
Match: MYCBP_BOVIN (C-Myc-binding protein OS=Bos taurus GN=MYCBP PE=3 SV=3)

HSP 1 Score: 79.3 bits (194), Expect = 3.0e-14
Identity = 38/85 (44.71%), Postives = 62/85 (72.94%), Query Frame = 1


Query: 1  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGG--PSIA 60
          M H +  ++K+E FR+YLE +GV+D LTKVLVAL+E+ +KP+SAL+F++  LG   P   
Sbjct: 1  MAHYKAADSKREQFRRYLEKSGVLDTLTKVLVALYEEPEKPNSALDFLKHHLGAATPENP 60

Query: 61 EYEKLQSEMADLQVKYDELLATHKE 84
          E E L+ E+A+++ KY+ ++  +K+
Sbjct: 61 EIELLRLELAEMKEKYEAIVEENKK 85

[Close]

BLAST of CmoCh12G011680 vs. Swiss-Prot
Match: MYCBP_MOUSE (C-Myc-binding protein OS=Mus musculus GN=Mycbp PE=1 SV=5)

HSP 1 Score: 78.2 bits (191), Expect = 6.6e-14
Identity = 38/85 (44.71%), Postives = 61/85 (71.76%), Query Frame = 1


Query: 1  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGG--PSIA 60
          M H +  ++K+E FR+YLE +GV+D LTKVLVAL+E+ +KP+SAL+F++  LG   P   
Sbjct: 1  MAHYKAADSKREQFRRYLEKSGVLDTLTKVLVALYEEPEKPTSALDFLKHHLGAATPENP 60

Query: 61 EYEKLQSEMADLQVKYDELLATHKE 84
          E E L+ E+A+++ KY+  +  +K+
Sbjct: 61 EIELLRLELAEMKEKYEATVEENKK 85

[Close]

BLAST of CmoCh12G011680 vs. Swiss-Prot
Match: MYCBP_DICDI (C-Myc-binding protein homolog OS=Dictyostelium discoideum GN=mycbp PE=3 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 7.3e-13
Identity = 39/84 (46.43%), Postives = 55/84 (65.48%), Query Frame = 1


Query: 6  EKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQS 65
          +  A+KE F+ YLE +GV+DALTKVLV L+E+ DKPS ALEFI++ LG     + + L+ 
Sbjct: 2  QNSAEKEEFKGYLEKSGVIDALTKVLVGLYEESDKPSDALEFIKKHLGNSLGIDVDALKQ 61

Query: 66 EMADLQVKYDELLATHKETCKELE 90
          E ADL+ +   L     +  K+LE
Sbjct: 62 ENADLKAEVSALTQRVDDLSKKLE 85

[Close]

BLAST of CmoCh12G011680 vs. TrEMBL
Match: B9S7I6_RICCO (Associate of C-myc, putative OS=Ricinus communis GN=RCOM_0608060 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 7.3e-36
Identity = 80/115 (69.57%), Postives = 102/115 (88.70%), Query Frame = 1


Query: 1   MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEY 60
           M + +EKEAKKEAFRKYLES+GV+DALTKVLV+L+EQ++KPSSALEFIQQ+LGGPS++EY
Sbjct: 2   MRYKEEKEAKKEAFRKYLESSGVLDALTKVLVSLYEQNEKPSSALEFIQQKLGGPSLSEY 61

Query: 61  EKLQSEMADLQVKYDELLATHKETCKELEGLKSLHNVTAMSTKDTTDDEEENDKV 116
           EKLQ+EM+DLQ+KY++L ATH+E CKELE LK LHN+T  ST +TT+ E   D++
Sbjct: 62  EKLQTEMSDLQIKYNDLSATHQEICKELEELKHLHNIT--STTETTNSEATRDEL 114

[Close]

BLAST of CmoCh12G011680 vs. TrEMBL
Match: A0A0S3S511_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.05G133300 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 4.7e-35
Identity = 78/113 (69.03%), Postives = 97/113 (85.84%), Query Frame = 1


Query: 1   MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEY 60
           M + +EKEAKKEAFRKYLE++G VDALTKVLVAL+EQ+DKPSSA+EFIQQ+L  PSI+EY
Sbjct: 3   MRYKEEKEAKKEAFRKYLETSGAVDALTKVLVALYEQNDKPSSAVEFIQQKLSCPSISEY 62

Query: 61  EKLQSEMADLQVKYDELLATHKETCKELEGLKSLHNVTAMSTKDTTDDEEEND 114
           EKLQ+E +DLQ+KY+ELLA H+ TCKELE +KS H +  +STK+TTD+E   D
Sbjct: 63  EKLQAEFSDLQIKYNELLAAHQRTCKELEEIKSSHVLATVSTKETTDNESPKD 115

[Close]

BLAST of CmoCh12G011680 vs. TrEMBL
Match: W9S6T9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_024541 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 8.1e-35
Identity = 77/112 (68.75%), Postives = 98/112 (87.50%), Query Frame = 1


Query: 4   IQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKL 63
           +QEKEAKKEAFRKYLES+GV+DALTKVLVAL+EQ+DKPSSALEFIQQ+LGGPS ++YEKL
Sbjct: 1   MQEKEAKKEAFRKYLESSGVLDALTKVLVALYEQNDKPSSALEFIQQKLGGPSASDYEKL 60

Query: 64  QSEMADLQVKYDELLATHKETCKELEGLKSLHNVTAMSTKDTTDDEEENDKV 116
           Q+EM+DLQ KY++LLA H+E  KELE +KS H++   S K+TTD E + +++
Sbjct: 61  QAEMSDLQTKYNQLLAAHQEISKELEEVKSSHDMAPSSAKETTDGEPQKERL 112

[Close]

BLAST of CmoCh12G011680 vs. TrEMBL
Match: A9PH87_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s02250g PE=2 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 8.1e-35
Identity = 81/114 (71.05%), Postives = 97/114 (85.09%), Query Frame = 1


Query: 1   MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEY 60
           M + +EKEAKKEAFRKYLES+GV+DALTKVLVAL+EQ+DKPSSALEFIQQ+LGGPS++EY
Sbjct: 2   MRYKEEKEAKKEAFRKYLESSGVLDALTKVLVALYEQNDKPSSALEFIQQKLGGPSLSEY 61

Query: 61  EKLQSEMADLQVKYDELLATHKETCKELEGLKSLHNVTAMSTKDTTDDEEENDK 115
           EKLQ+EM++LQ KY +LL  H+ETCKELE LK+ HNV   S  DTTD E   D+
Sbjct: 62  EKLQAEMSELQNKYGDLLGAHQETCKELEELKNSHNVA--SATDTTDGEAPKDE 113

[Close]

BLAST of CmoCh12G011680 vs. TrEMBL
Match: V7BMQ1_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_006G106600g PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 3.1e-34
Identity = 77/113 (68.14%), Postives = 94/113 (83.19%), Query Frame = 1


Query: 1   MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEY 60
           M + +EKEAKKE FRKYLE++G VDALTKVLVAL+EQ+DKPSSA+EFIQQ+L  PSI EY
Sbjct: 3   MRYKEEKEAKKEGFRKYLETSGAVDALTKVLVALYEQNDKPSSAVEFIQQKLSCPSIPEY 62

Query: 61  EKLQSEMADLQVKYDELLATHKETCKELEGLKSLHNVTAMSTKDTTDDEEEND 114
           EKLQ+E +DLQ+KY+ELLA H+ TCKELE +KS H +  +STK+TTD E   D
Sbjct: 63  EKLQAEFSDLQIKYNELLAAHQRTCKELEEIKSSHVLATVSTKETTDSESPKD 115

[Close]

BLAST of CmoCh12G011680 vs. TAIR10
Match: AT2G14045.1 (AT2G14045.1 unknown protein)

HSP 1 Score: 146.4 bits (368), Expect = 1.1e-35
Identity = 74/109 (67.89%), Postives = 95/109 (87.16%), Query Frame = 1


Query: 1   MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEY 60
           M + +EKE KKEAFRKYLES+GV+D+LTKVLV+L+EQ+DKPSSALEFIQQ+LGGPS+++Y
Sbjct: 2   MRYKEEKEVKKEAFRKYLESSGVLDSLTKVLVSLYEQNDKPSSALEFIQQKLGGPSVSDY 61

Query: 61  EKLQSEMADLQVKYDELLATHKETCKELEGLKSLHNVTAMSTKDTTDDE 110
           EKLQ+E +DLQ+KY+ELLA H+ET +EL G+KSLH  +  S+KD  D E
Sbjct: 62  EKLQAEKSDLQIKYNELLAKHQETLRELNGVKSLH--SRNSSKDDADRE 108

[Close]

BLAST of CmoCh12G011680 vs. NCBI nr
Match: gi|659070739|ref|XP_008456430.1| (PREDICTED: C-Myc-binding protein homolog [Cucumis melo])

HSP 1 Score: 201.1 bits (510), Expect = 1.1e-48
Identity = 102/115 (88.70%), Postives = 109/115 (94.78%), Query Frame = 1


Query: 1   MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEY 60
           MGH +EKEAKKEAFRKYLESNG+VDALTKVLVAL+EQ+DKPSSALEFIQQRLGGPS AEY
Sbjct: 1   MGHKEEKEAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGGPSKAEY 60

Query: 61  EKLQSEMADLQVKYDELLATHKETCKELEGLKSLHNVTAMSTKDTTDDEEENDKV 116
           EKLQSEMADLQVKYDELLATHKETCKELE LKS HN+T  STKDTTDDE+ENDK+
Sbjct: 61  EKLQSEMADLQVKYDELLATHKETCKELEELKSSHNITVTSTKDTTDDEDENDKL 115

[Close]

BLAST of CmoCh12G011680 vs. NCBI nr
Match: gi|449442969|ref|XP_004139253.1| (PREDICTED: C-Myc-binding protein homolog [Cucumis sativus])

HSP 1 Score: 199.5 bits (506), Expect = 3.1e-48
Identity = 102/115 (88.70%), Postives = 108/115 (93.91%), Query Frame = 1


Query: 1   MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEY 60
           MGH +EKEAKKEAFRKYLESNG+VDALTKVLVAL+EQ+DKPSSALEFIQQRLGGPS AEY
Sbjct: 1   MGHKEEKEAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGGPSKAEY 60

Query: 61  EKLQSEMADLQVKYDELLATHKETCKELEGLKSLHNVTAMSTKDTTDDEEENDKV 116
           EKLQSEMADLQVKYDELLATHKETCKELE LK  HN+T  STKDTTDDEEENDK+
Sbjct: 61  EKLQSEMADLQVKYDELLATHKETCKELEELKCSHNMTVTSTKDTTDDEEENDKL 115

[Close]

BLAST of CmoCh12G011680 vs. NCBI nr
Match: gi|255561893|ref|XP_002521955.1| (PREDICTED: C-Myc-binding protein homolog isoform X1 [Ricinus communis])

HSP 1 Score: 157.9 bits (398), Expect = 1.0e-35
Identity = 80/115 (69.57%), Postives = 102/115 (88.70%), Query Frame = 1


Query: 1   MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEY 60
           M + +EKEAKKEAFRKYLES+GV+DALTKVLV+L+EQ++KPSSALEFIQQ+LGGPS++EY
Sbjct: 2   MRYKEEKEAKKEAFRKYLESSGVLDALTKVLVSLYEQNEKPSSALEFIQQKLGGPSLSEY 61

Query: 61  EKLQSEMADLQVKYDELLATHKETCKELEGLKSLHNVTAMSTKDTTDDEEENDKV 116
           EKLQ+EM+DLQ+KY++L ATH+E CKELE LK LHN+T  ST +TT+ E   D++
Sbjct: 62  EKLQTEMSDLQIKYNDLSATHQEICKELEELKHLHNIT--STTETTNSEATRDEL 114

[Close]

BLAST of CmoCh12G011680 vs. NCBI nr
Match: gi|743917862|ref|XP_011002925.1| (PREDICTED: C-Myc-binding protein homolog [Populus euphratica])

HSP 1 Score: 156.0 bits (393), Expect = 4.0e-35
Identity = 82/113 (72.57%), Postives = 96/113 (84.96%), Query Frame = 1


Query: 1   MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEY 60
           M + +EKEAKKEAFRKYLES+GVVDALTKVLVAL+EQ+DKPSSALEFIQQ+LGGPS++EY
Sbjct: 2   MRYKEEKEAKKEAFRKYLESSGVVDALTKVLVALYEQNDKPSSALEFIQQKLGGPSLSEY 61

Query: 61  EKLQSEMADLQVKYDELLATHKETCKELEGLKSLHNVTAMSTKDTTDDEEEND 114
           EKLQ+EM++LQ KY +LL  H+ETCKELE LK+ HNV   S  DTTD E   D
Sbjct: 62  EKLQAEMSELQNKYSDLLGAHQETCKELEELKNSHNVA--SATDTTDGEAPKD 112

[Close]

BLAST of CmoCh12G011680 vs. NCBI nr
Match: gi|951071912|ref|XP_014491431.1| (PREDICTED: C-Myc-binding protein homolog [Vigna radiata var. radiata])

HSP 1 Score: 155.2 bits (391), Expect = 6.8e-35
Identity = 78/113 (69.03%), Postives = 97/113 (85.84%), Query Frame = 1


Query: 1   MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEY 60
           M + +EKEAKKEAFRKYLE++G VDALTKVLVAL+EQ+DKPSSA+EFIQQ+L  PSI+EY
Sbjct: 3   MRYKEEKEAKKEAFRKYLETSGAVDALTKVLVALYEQNDKPSSAVEFIQQKLSCPSISEY 62

Query: 61  EKLQSEMADLQVKYDELLATHKETCKELEGLKSLHNVTAMSTKDTTDDEEEND 114
           EKLQ+E +DLQ+KY+ELLA H+ TCKELE +KS H +  +STK+TTD+E   D
Sbjct: 63  EKLQAEFSDLQIKYNELLAAHQRTCKELEEIKSSHVLATVSTKETTDNESPKD 115

The following BLAST results are available for this feature:

BLAST of CmoCh12G011680 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MYCBP_PONAB	3.0e-14	44.71	C-Myc-binding protein OS=Pongo abelii GN=MYCBP PE=3 SV=3	[more]
MYCBP_HUMAN	3.0e-14	44.71	C-Myc-binding protein OS=Homo sapiens GN=MYCBP PE=1 SV=3	[more]
MYCBP_BOVIN	3.0e-14	44.71	C-Myc-binding protein OS=Bos taurus GN=MYCBP PE=3 SV=3	[more]
MYCBP_MOUSE	6.6e-14	44.71	C-Myc-binding protein OS=Mus musculus GN=Mycbp PE=1 SV=5	[more]
MYCBP_DICDI	7.3e-13	46.43	C-Myc-binding protein homolog OS=Dictyostelium discoideum GN=mycbp PE=3 SV=1	[more]

BLAST of CmoCh12G011680 vs. TrEMBL


Match Name	E-value	Identity	Description
B9S7I6_RICCO	7.3e-36	69.57	Associate of C-myc, putative OS=Ricinus communis GN=RCOM_0608060 PE=4 SV=1	[more]
A0A0S3S511_PHAAN	4.7e-35	69.03	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.05G133300 PE=...	[more]
W9S6T9_9ROSA	8.1e-35	68.75	Uncharacterized protein OS=Morus notabilis GN=L484_024541 PE=4 SV=1	[more]
A9PH87_POPTR	8.1e-35	71.05	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s02250g PE=2 SV=1	[more]
V7BMQ1_PHAVU	3.1e-34	68.14	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_006G106600g PE=4 SV=1	[more]

BLAST of CmoCh12G011680 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G14045.1	1.1e-35	67.89	unknown protein	[more]

BLAST of CmoCh12G011680 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659070739\|ref\|XP_008456430.1\|	1.1e-48	88.70	PREDICTED: C-Myc-binding protein homolog [Cucumis melo]	[more]
gi\|449442969\|ref\|XP_004139253.1\|	3.1e-48	88.70	PREDICTED: C-Myc-binding protein homolog [Cucumis sativus]	[more]
gi\|255561893\|ref\|XP_002521955.1\|	1.0e-35	69.57	PREDICTED: C-Myc-binding protein homolog isoform X1 [Ricinus communis]	[more]
gi\|743917862\|ref\|XP_011002925.1\|	4.0e-35	72.57	PREDICTED: C-Myc-binding protein homolog [Populus euphratica]	[more]
gi\|951071912\|ref\|XP_014491431.1\|	6.8e-35	69.03	PREDICTED: C-Myc-binding protein homolog [Vigna radiata var. radiata]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR026060	AMY1

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0003713	transcription coactivator activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0008150	biological_process
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003713	transcription coactivator activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh12G011680.1	CmoCh12G011680.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026060	Associate of Myc 1	PANTHER	PTHR13168	ASSOCIATE OF C-MYC AMY-1	coord: 1..92 score: 1.7
None	No IPR available	unknown	Coil	Coil	coord: 60..80 scor
None	No IPR available	PRINTS	PR02028	CMYCBINDINGP	coord: 18..32 score: 3.7E-15coord: 32..46 score: 3.7E-15coord: 8..18 score: 3.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh12G011680	Cucsa.132920	Cucumber (Gy14) v1	cgycmoB0359
CmoCh12G011680	CmaCh12G011470	Cucurbita maxima (Rimu)	cmacmoB177
CmoCh12G011680	CmaCh05G012300	Cucurbita maxima (Rimu)	cmacmoB763
CmoCh12G011680	Cla013623	Watermelon (97103) v1	cmowmB156
CmoCh12G011680	Csa2G009580	Cucumber (Chinese Long) v2	cmocuB157
CmoCh12G011680	MELO3C004419	Melon (DHL92) v3.5.1	cmomeB161
CmoCh12G011680	ClCG02G016980	Watermelon (Charleston Gray)	cmowcgB144
CmoCh12G011680	CSPI02G02600	Wild cucumber (PI 183967)	cmocpiB159
CmoCh12G011680	Lsi11G004110	Bottle gourd (USVL1VR-Ls)	cmolsiB148
CmoCh12G011680	Cp4.1LG07g09700	Cucurbita pepo (Zucchini)	cmocpeB175
CmoCh12G011680	MELO3C004419.2	Melon (DHL92) v3.6.1	cmomedB177
CmoCh12G011680	CsaV3_2G003760	Cucumber (Chinese Long) v3	cmocucB0185
CmoCh12G011680	Cla97C02G042720	Watermelon (97103) v2	cmowmbB161
CmoCh12G011680	Bhi06G001555	Wax gourd	cmowgoB0171
CmoCh12G011680	CsGy2G002700	Cucumber (Gy14) v2	cgybcmoB170
CmoCh12G011680	Carg17438	Silver-seed gourd	carcmoB0356

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh12G011680	Cucurbita pepo (Zucchini)	cmocpeB147
CmoCh12G011680	Silver-seed gourd	carcmoB1441
CmoCh12G011680	Wax gourd	cmowgoB0187
CmoCh12G011680	Cucurbita moschata (Rifu)	cmocmoB086
CmoCh12G011680	Cucurbita moschata (Rifu)	cmocmoB148