Cucsa.114150 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGATGGTTATTCCAAAATCAAAGCAGCTTCCAAATTCAAATCAAGATCCATCGATTACTCCGATCTCTCCTCTCTTCCTCACTCTCTCACTTTCAGTGCCGCCGTCTCCAATCCCACCCGAACAAATCGGCCGCAGGAGCCACCGCACGGCCGCTTACCGGAGGAAGACGAAGAAGTAAACGACGACGAATGCGAACGGCCCCGTGGAGCCACCACCGCCGCCGCTACACTTTGTCGAAACAGCTCTGTTTCATCATCGGTTTCCGGATTTCAGTCTGCAGTGAAAAGAGCACTATCGATGCGGAGATCTTCATCCGTAGCGGAACGGTACTGTAGGATTCACGATCAGTTCGCGACATTTGCATCGCCGATCGAGGATGATGAAATGGAAGGGGGAGACTGGAAGGAAAGAGGAAAAATAGGAGGATCTGAGATAAGGAAGAAGAAGAAGAAGAAGAACGCGGCAGAGAAGATCGTTAGAGCAT ATGGCGGATGGTTATTCCAAAATCAAAGCAGCTTCCAAATTCAAATCAAGATCCATCGATTACTCCGATCTCTCCTCTCTTCCTCACTCTCTCACTTTCAGTGCCGCCGTCTCCAATCCCACCCGAACAAATCGGCCGCAGGAGCCACCGCACGGCCGCTTACCGGAGGAAGACGAAGAAGTAAACGACGACGAATGCGAACGGCCCCGTGGAGCCACCACCGCCGCCGCTACACTTTGTCGAAACAGCTCTGTTTCATCATCGGTTTCCGGATTTCAGTCTGCAGTGAAAAGAGCACTATCGATGCGGAGATCTTCATCCGTAGCGGAACGGTACTGTAGGATTCACGATCAGTTCGCGACATTTGCATCGCCGATCGAGGATGATGAAATGGAAGGGGGAGACTGGAAGGAAAGAGGAAAAATAGGAGGATCTGAGATAAGgaagaagaagaagaagaagaaCGCGGCAGAGAAGATCGTTAGAGCAT ATGGCGGATGGTTATTCCAAAATCAAAGCAGCTTCCAAATTCAAATCAAGATCCATCGATTACTCCGATCTCTCCTCTCTTCCTCACTCTCTCACTTTCAGTGCCGCCGTCTCCAATCCCACCCGAACAAATCGGCCGCAGGAGCCACCGCACGGCCGCTTACCGGAGGAAGACGAAGAAGTAAACGACGACGAATGCGAACGGCCCCGTGGAGCCACCACCGCCGCCGCTACACTTTGTCGAAACAGCTCTGTTTCATCATCGGTTTCCGGATTTCAGTCTGCAGTGAAAAGAGCACTATCGATGCGGAGATCTTCATCCGTAGCGGAACGGTACTGTAGGATTCACGATCAGTTCGCGACATTTGCATCGCCGATCGAGGATGATGAAATGGAAGGGGGAGACTGGAAGGAAAGAGGAAAAATAGGAGGATCTGAGATAAGGAAGAAGAAGAAGAAGAAGAACGCGGCAGAGAAGATCGTTAGAGCAT MADGYSKIKAASKFKSRSIDYSDLSSLPHSLTFSAAVSNPTRTNRPQEPPHGRLPEEDEEVNDDECERPRGATTAAATLCRNSSVSSSVSGFQSAVKRALSMRRSSSVAERYCRIHDQFATFASPIEDDEMEGGDWKERGKIGGSEIRKKKKKKNAAEKIVRAX
BLAST of Cucsa.114150 vs. TrEMBL
Match: A0A0A0L2N9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G110030 PE=4 SV=1) HSP 1 Score: 324.3 bits (830), Expect = 8.4e-86 Identity = 162/163 (99.39%), Postives = 163/163 (100.00%), Query Frame = 1
BLAST of Cucsa.114150 vs. TrEMBL
Match: A0A061DXA0_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_006157 PE=4 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 6.8e-19 Identity = 71/175 (40.57%), Postives = 97/175 (55.43%), Query Frame = 1
BLAST of Cucsa.114150 vs. TrEMBL
Match: M5XW66_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024829mg PE=4 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 1.2e-15 Identity = 72/174 (41.38%), Postives = 93/174 (53.45%), Query Frame = 1
BLAST of Cucsa.114150 vs. TrEMBL
Match: U7E1G7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0022s00510g PE=4 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 5.9e-15 Identity = 60/136 (44.12%), Postives = 76/136 (55.88%), Query Frame = 1
BLAST of Cucsa.114150 vs. TrEMBL
Match: A0A166GLL0_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_001747 PE=4 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 2.3e-14 Identity = 63/170 (37.06%), Postives = 84/170 (49.41%), Query Frame = 1
BLAST of Cucsa.114150 vs. TAIR10
Match: AT4G24275.1 (AT4G24275.1 Identified as a screen for stress-responsive genes.) HSP 1 Score: 62.0 bits (149), Expect = 3.9e-10 Identity = 44/108 (40.74%), Postives = 57/108 (52.78%), Query Frame = 1
BLAST of Cucsa.114150 vs. NCBI nr
Match: gi|700201122|gb|KGN56255.1| (hypothetical protein Csa_3G110030 [Cucumis sativus]) HSP 1 Score: 324.3 bits (830), Expect = 1.2e-85 Identity = 162/163 (99.39%), Postives = 163/163 (100.00%), Query Frame = 1
BLAST of Cucsa.114150 vs. NCBI nr
Match: gi|590681929|ref|XP_007041211.1| (Uncharacterized protein TCM_006157 [Theobroma cacao]) HSP 1 Score: 102.1 bits (253), Expect = 9.7e-19 Identity = 71/175 (40.57%), Postives = 97/175 (55.43%), Query Frame = 1
BLAST of Cucsa.114150 vs. NCBI nr
Match: gi|731411427|ref|XP_010657977.1| (PREDICTED: uncharacterized protein LOC104881045 [Vitis vinifera]) HSP 1 Score: 92.4 bits (228), Expect = 7.7e-16 Identity = 73/171 (42.69%), Postives = 93/171 (54.39%), Query Frame = 1
BLAST of Cucsa.114150 vs. NCBI nr
Match: gi|596253096|ref|XP_007224729.1| (hypothetical protein PRUPE_ppa024829mg [Prunus persica]) HSP 1 Score: 91.3 bits (225), Expect = 1.7e-15 Identity = 72/174 (41.38%), Postives = 93/174 (53.45%), Query Frame = 1
BLAST of Cucsa.114150 vs. NCBI nr
Match: gi|1021023777|gb|KZM81565.1| (hypothetical protein DCAR_029178 [Daucus carota subsp. sativus]) HSP 1 Score: 90.9 bits (224), Expect = 2.2e-15 Identity = 68/168 (40.48%), Postives = 88/168 (52.38%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |