Cp4.1LG01g08460 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCGATACCTACTCCAAGATCGAAGCCGCCTGCAAATTGAAATCAAGATCTGTAGATTACTCCGATCTTTCATCGCTCCCTCACTCTCTTAGATTCACCGCTGCCGTCTCCAATCCGAACTCTCGCGATTCCGATCAAAACAGGACGAATCGGTCGCGGGAGCCGCCGCATGGTTGCTTGCCAGAGGAGGAAGAAGACGAATACCGCAGCGCTGCAACCGCTACTGCCTCTACGCTGAGACGGAACTGCTCTGTTTCTGCATCGGCCTCCGGATTCCACTCGGCAGTGAAGAGAGCTCTGTCGATGCGACGATCTTCGTCTGTGGCGGAGCGGTACAGTAGGATTCACGATCAGTTCGGGACGCTTGCATCGCCGATCGACGACGATGAAATCGAAGGCGAAGAATCGAAGGAAGGCCGAAATGCGGGAGGATCTGTAAGGAAGAAGAAGACGAACGCGGCTGGGAAGATCGTTAGAGCTTGTAAGCGACTTTTTGGACTGTAG ATGGCCGATACCTACTCCAAGATCGAAGCCGCCTGCAAATTGAAATCAAGATCTGTAGATTACTCCGATCTTTCATCGCTCCCTCACTCTCTTAGATTCACCGCTGCCGTCTCCAATCCGAACTCTCGCGATTCCGATCAAAACAGGACGAATCGGTCGCGGGAGCCGCCGCATGGTTGCTTGCCAGAGGAGGAAGAAGACGAATACCGCAGCGCTGCAACCGCTACTGCCTCTACGCTGAGACGGAACTGCTCTGTTTCTGCATCGGCCTCCGGATTCCACTCGGCAGTGAAGAGAGCTCTGTCGATGCGACGATCTTCGTCTGTGGCGGAGCGGTACAGTAGGATTCACGATCAGTTCGGGACGCTTGCATCGCCGATCGACGACGATGAAATCGAAGGCGAAGAATCGAAGGAAGGCCGAAATGCGGGAGGATCTGTAAGGAAGAAGAAGACGAACGCGGCTGGGAAGATCGTTAGAGCTTGTAAGCGACTTTTTGGACTGTAG ATGGCCGATACCTACTCCAAGATCGAAGCCGCCTGCAAATTGAAATCAAGATCTGTAGATTACTCCGATCTTTCATCGCTCCCTCACTCTCTTAGATTCACCGCTGCCGTCTCCAATCCGAACTCTCGCGATTCCGATCAAAACAGGACGAATCGGTCGCGGGAGCCGCCGCATGGTTGCTTGCCAGAGGAGGAAGAAGACGAATACCGCAGCGCTGCAACCGCTACTGCCTCTACGCTGAGACGGAACTGCTCTGTTTCTGCATCGGCCTCCGGATTCCACTCGGCAGTGAAGAGAGCTCTGTCGATGCGACGATCTTCGTCTGTGGCGGAGCGGTACAGTAGGATTCACGATCAGTTCGGGACGCTTGCATCGCCGATCGACGACGATGAAATCGAAGGCGAAGAATCGAAGGAAGGCCGAAATGCGGGAGGATCTGTAAGGAAGAAGAAGACGAACGCGGCTGGGAAGATCGTTAGAGCTTGTAAGCGACTTTTTGGACTGTAG MADTYSKIEAACKLKSRSVDYSDLSSLPHSLRFTAAVSNPNSRDSDQNRTNRSREPPHGCLPEEEEDEYRSAATATASTLRRNCSVSASASGFHSAVKRALSMRRSSSVAERYSRIHDQFGTLASPIDDDEIEGEESKEGRNAGGSVRKKKTNAAGKIVRACKRLFGL
BLAST of Cp4.1LG01g08460 vs. TrEMBL
Match: A0A0A0L2N9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G110030 PE=4 SV=1) HSP 1 Score: 195.3 bits (495), Expect = 6.0e-47 Identity = 118/177 (66.67%), Postives = 132/177 (74.58%), Query Frame = 1
BLAST of Cp4.1LG01g08460 vs. TrEMBL
Match: A0A061DXA0_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_006157 PE=4 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 1.0e-14 Identity = 69/169 (40.83%), Postives = 99/169 (58.58%), Query Frame = 1
BLAST of Cp4.1LG01g08460 vs. TrEMBL
Match: M5XW66_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024829mg PE=4 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 3.0e-14 Identity = 72/176 (40.91%), Postives = 99/176 (56.25%), Query Frame = 1
BLAST of Cp4.1LG01g08460 vs. TrEMBL
Match: U7E1G7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0022s00510g PE=4 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 3.9e-14 Identity = 65/169 (38.46%), Postives = 93/169 (55.03%), Query Frame = 1
BLAST of Cp4.1LG01g08460 vs. TrEMBL
Match: W9QEB7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_001375 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 1.7e-12 Identity = 67/147 (45.58%), Postives = 88/147 (59.86%), Query Frame = 1
BLAST of Cp4.1LG01g08460 vs. TAIR10
Match: AT4G24275.1 (AT4G24275.1 Identified as a screen for stress-responsive genes.) HSP 1 Score: 54.7 bits (130), Expect = 6.4e-08 Identity = 51/130 (39.23%), Postives = 72/130 (55.38%), Query Frame = 1
BLAST of Cp4.1LG01g08460 vs. NCBI nr
Match: gi|700201122|gb|KGN56255.1| (hypothetical protein Csa_3G110030 [Cucumis sativus]) HSP 1 Score: 195.3 bits (495), Expect = 8.7e-47 Identity = 118/177 (66.67%), Postives = 132/177 (74.58%), Query Frame = 1
BLAST of Cp4.1LG01g08460 vs. NCBI nr
Match: gi|590681929|ref|XP_007041211.1| (Uncharacterized protein TCM_006157 [Theobroma cacao]) HSP 1 Score: 88.2 bits (217), Expect = 1.5e-14 Identity = 69/169 (40.83%), Postives = 99/169 (58.58%), Query Frame = 1
BLAST of Cp4.1LG01g08460 vs. NCBI nr
Match: gi|596253096|ref|XP_007224729.1| (hypothetical protein PRUPE_ppa024829mg [Prunus persica]) HSP 1 Score: 86.7 bits (213), Expect = 4.3e-14 Identity = 72/176 (40.91%), Postives = 99/176 (56.25%), Query Frame = 1
BLAST of Cp4.1LG01g08460 vs. NCBI nr
Match: gi|566259922|ref|XP_006389515.1| (hypothetical protein POPTR_0022s00510g [Populus trichocarpa]) HSP 1 Score: 86.3 bits (212), Expect = 5.7e-14 Identity = 65/169 (38.46%), Postives = 93/169 (55.03%), Query Frame = 1
BLAST of Cp4.1LG01g08460 vs. NCBI nr
Match: gi|731411427|ref|XP_010657977.1| (PREDICTED: uncharacterized protein LOC104881045 [Vitis vinifera]) HSP 1 Score: 82.8 bits (203), Expect = 6.3e-13 Identity = 67/159 (42.14%), Postives = 91/159 (57.23%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|