CsaV3_3G006440 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_3G006440
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Phospho-N-acetylmuramoyl-pentapeptide-transferase
Location	chr3 : 5602359 .. 5603485 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTAATTGTTTATTTGTTTATTTGTTTGTCGCCTACTTTGATTTTTTGTTTTTTAATTATTATAATTTTGTTTATTTTTTATTTTCATTATCAATCTTGATAAATCGCTACGCATTTCTCTATCATTTTCCGCCATAATTTCTCCACAATCCCCAAACTCAAGAAAAAAGAAAATGGCGGATGGTTATTCCAAAATCAAAGCAGCTTCCAAATTCAAATCAAGATCCATCGATTACTCCGATCTCTCCTCTCTTCCTCACTCTCTCACTTTCAGTGCCGCCGTCTCCAATCCCACCCGGACAAATCGGCCGCAGGAGCCACCGCACGGCCGCTTACCGGAGGAAGACGAAGAAGTAAACGACGACGAATGCGATCGGCCCCGTGGAGCCACCACCGCCGCCGCTACACTTTGTCGAAACAGCTCTGTTTCATCATCGGTTTCCGGATTTCAGTCTGCAGTGAAAAGAGCACTATCGATGCGGAGATCTTCATCCGTAGCGGAACGGTACTGTAGGATTCACGATCAGTTCGCGACATTTGCATCGCCGATCGAGGATGATGAAATGGAAGGGGGAGACTGGAAGGAAAGAGGAAAAATAGGAGGATCTGAGATAAGGAAGAAGAAGAAGAAGAAGAACGCGGCAGAGAAGATCGTTAGAGCATGTAAGCGAATTTTTGGACTGTAGTTTTTTTTTTTTTTTTGAATTTGTTTGTGTTAATTAATTAATCAAATTCTCTTCTCTGTGCTTTTGTGGTTGAATATTGTGTTTTTTGAAGTGAGAAATGAGAAAGAATATGCTGTTTGATTGATTTTTGGGAATTGCGTTATAGAAAGAAATGAAATCTGAGTTTGATTTTATAAATCAATAATTACACATTCGTGTTCGTGTTCGTGTTCGTGTTCTTCCGAATGCAAAGTGATAGCGTAGTCAGTCTGCCCAAACACCGTCAATACCAACTTTTTTACCTTCTCTCTCTCTCTCTCTCTCTCTAAAAATCCAATTTGTCAACTTCTCTCGAGGATTTAATTCTGATGAGGTGTAAGAATGGAATCTAGAAAGCAACTATTTGCAATCAATTATCGTCCATTTTGGATCACATCTATTTTTCTTCATCTTCTTTGATT

mRNA sequence

ATGGCGGATGGTTATTCCAAAATCAAAGCAGCTTCCAAATTCAAATCAAGATCCATCGATTACTCCGATCTCTCCTCTCTTCCTCACTCTCTCACTTTCAGTGCCGCCGTCTCCAATCCCACCCGGACAAATCGGCCGCAGGAGCCACCGCACGGCCGCTTACCGGAGGAAGACGAAGAAGTAAACGACGACGAATGCGATCGGCCCCGTGGAGCCACCACCGCCGCCGCTACACTTTGTCGAAACAGCTCTGTTTCATCATCGGTTTCCGGATTTCAGTCTGCAGTGAAAAGAGCACTATCGATGCGGAGATCTTCATCCGTAGCGGAACGGTACTGTAGGATTCACGATCAGTTCGCGACATTTGCATCGCCGATCGAGGATGATGAAATGGAAGGGGGAGACTGGAAGGAAAGAGGAAAAATAGGAGGATCTGAGATAAGGAAGAAGAAGAAGAAGAAGAACGCGGCAGAGAAGATCGTTAGAGCATGTAAGCGAATTTTTGGACTGTAG

Coding sequence (CDS)

ATGGCGGATGGTTATTCCAAAATCAAAGCAGCTTCCAAATTCAAATCAAGATCCATCGATTACTCCGATCTCTCCTCTCTTCCTCACTCTCTCACTTTCAGTGCCGCCGTCTCCAATCCCACCCGGACAAATCGGCCGCAGGAGCCACCGCACGGCCGCTTACCGGAGGAAGACGAAGAAGTAAACGACGACGAATGCGATCGGCCCCGTGGAGCCACCACCGCCGCCGCTACACTTTGTCGAAACAGCTCTGTTTCATCATCGGTTTCCGGATTTCAGTCTGCAGTGAAAAGAGCACTATCGATGCGGAGATCTTCATCCGTAGCGGAACGGTACTGTAGGATTCACGATCAGTTCGCGACATTTGCATCGCCGATCGAGGATGATGAAATGGAAGGGGGAGACTGGAAGGAAAGAGGAAAAATAGGAGGATCTGAGATAAGGAAGAAGAAGAAGAAGAAGAACGCGGCAGAGAAGATCGTTAGAGCATGTAAGCGAATTTTTGGACTGTAG

Protein sequence

MADGYSKIKAASKFKSRSIDYSDLSSLPHSLTFSAAVSNPTRTNRPQEPPHGRLPEEDEEVNDDECDRPRGATTAAATLCRNSSVSSSVSGFQSAVKRALSMRRSSSVAERYCRIHDQFATFASPIEDDEMEGGDWKERGKIGGSEIRKKKKKKNAAEKIVRACKRIFGL

Homology

[Close]

BLAST of CsaV3_3G006440 vs. NCBI nr
Match: KGN56255.1 (hypothetical protein Csa_3G110030 [Cucumis sativus])

HSP 1 Score: 317.4 bits (812), Expect = 3.0e-83
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0


Query: 1   MADGYSKIKAASKFKSRSIDYSDLSSLPHSLTFSAAVSNPTRTNRPQEPPHGRLPEEDEE 60
           MADGYSKIKAASKFKSRSIDYSDLSSLPHSLTFSAAVSNPTRTNRPQEPPHGRLPEEDEE
Sbjct: 1   MADGYSKIKAASKFKSRSIDYSDLSSLPHSLTFSAAVSNPTRTNRPQEPPHGRLPEEDEE 60

Query: 61  VNDDECDRPRGATTAAATLCRNSSVSSSVSGFQSAVKRALSMRRSSSVAERYCRIHDQFA 120
           VNDDECDRPRGATTAAATLCRNSSVSSSVSGFQSAVKRALSMRRSSSVAERYCRIHDQFA
Sbjct: 61  VNDDECDRPRGATTAAATLCRNSSVSSSVSGFQSAVKRALSMRRSSSVAERYCRIHDQFA 120

Query: 121 TFASPIEDDEMEGGDWKERGKIGGSEIRKXXXXXNAAEKIVRACKRIFGL 171
           TFASPIEDDEMEGGDWKERGKIGGSEIRKXXXXXNAAEKIVRACKRIFGL
Sbjct: 121 TFASPIEDDEMEGGDWKERGKIGGSEIRKXXXXXNAAEKIVRACKRIFGL 170

[Close]

BLAST of CsaV3_3G006440 vs. NCBI nr
Match: XP_022136741.1 (uncharacterized protein LOC111008371 [Momordica charantia])

HSP 1 Score: 142.5 bits (358), Expect = 1.3e-30
Identity = 94/171 (54.97%), Postives = 104/171 (60.82%), Query Frame = 0


Query: 1   MADGYSKIKAASKFKSRSIDYSDLSSLPHSLTFSAAVSNP-TRTNRPQEPPHGRLPEEDE 60
           MADGYSKIKAA KFKSRSIDYSDL+SLPHSL F+AAV NP +  +   +    R   +  
Sbjct: 1   MADGYSKIKAACKFKSRSIDYSDLASLPHSLKFTAAVPNPNSLAHESDQNRANRARAQSC 60

Query: 61  EVNDDECDRPRGATTAAATLCRNSSVSSSVSGFQSAVKRALSMRRSSSVAERYCRIHDQF 120
                                          G  SAVKRALSMRRSSSVAERYCRIHDQF
Sbjct: 61  LPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLHSAVKRALSMRRSSSVAERYCRIHDQF 120

Query: 121 ATFASPIEDDEMEGGDWKERGKIGGSEIRKXXXXXNAAEKIVRACKRIFGL 171
           AT ASPI+D+E+  GD KE  K  GS  RK     NAA KIVRACKR+FGL
Sbjct: 121 ATLASPIDDEEIGAGDSKESRKSAGSVRRK---KKNAAGKIVRACKRLFGL 168

[Close]

BLAST of CsaV3_3G006440 vs. NCBI nr
Match: XP_022929198.1 (uncharacterized protein LOC111435863 [Cucurbita moschata])

HSP 1 Score: 109.0 bits (271), Expect = 1.6e-20
Identity = 88/176 (50.00%), Postives = 94/176 (53.41%), Query Frame = 0


Query: 1   MADGYSKIKAASKFKSRSIDYSDLSSLPHSLTF--SAAVSNPTRTN---RPQEPPHGRLP 60
           MAD YSKIKAA KFKSRSIDYSDL+SLPHS  F  +AAVSNP   +              
Sbjct: 1   MADSYSKIKAACKFKSRSIDYSDLTSLPHSPRFNAAAAVSNPNSHDXXXXXXXXXXXXXX 60

Query: 61  EEDEEVNDDECDRPRGATTAAATLCRNSSVSSSVSGFQSAVKRALSMRRSSSVAERYCRI 120
                                         SSSVSGF SAVKRALSMRRSSSVAERYCRI
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSVSGFHSAVKRALSMRRSSSVAERYCRI 120

Query: 121 HDQFATFASPIE-DDEMEGGDWKERGKIGGSEIRKXXXXXNAAEKIVRACKRIFGL 171
           HDQFAT ASPI+                       XXXXX    KIVRACKR+FG+
Sbjct: 121 HDQFATLASPIDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIVRACKRLFGI 176

[Close]

BLAST of CsaV3_3G006440 vs. NCBI nr
Match: PSS19027.1 (Flavin-dependent thymidylate synthase [Actinidia chinensis var. chinensis])

HSP 1 Score: 92.8 bits (229), Expect = 1.2e-15
Identity = 71/183 (38.80%), Postives = 94/183 (51.37%), Query Frame = 0


Query: 3   DGYSKIKAASKFKSRSIDYSDLSSLPHSLTFSAAVSNPTRTN---------RPQEPPHGR 62
           +GYS+IK     KSRSID+SDL SLP +L    + ++P+ T           P  P H  
Sbjct: 2   NGYSRIKFIGSTKSRSIDFSDLISLPQNLK-PKSPNHPSNTKTQQTNQIIINPYSPLHSP 61

Query: 63  LPEEDEEVNDDECDRPRGATTAAATLCRNSSVSS-------SVSGFQSAVKRALSMRRSS 122
              + E  N +          +   L RNSSVSS       + + FQ AVKR  SMRRSS
Sbjct: 62  PSPKFEHENGER---------SGVVLTRNSSVSSHRFYKKGNKTTFQLAVKRVFSMRRSS 121

Query: 123 SVAERYCRIHDQFATFASPIEDDEMEGGDWKERGKIGGSEIRKXXXXXNAAEKIVRACKR 170
           SV ERYCRIHDQ  T  +P ++DE   G++  + +     +RK         KI++ACK 
Sbjct: 122 SVTERYCRIHDQCVTLPTPFDEDEEGVGNYTVQAR----SVRKKKRQSRTGGKILKACKG 170

[Close]

BLAST of CsaV3_3G006440 vs. NCBI nr
Match: PSS00295.1 (Phospho-N-acetylmuramoyl-pentapeptide-transferase [Actinidia chinensis var. chinensis])

HSP 1 Score: 88.6 bits (218), Expect = 2.3e-14
Identity = 71/188 (37.77%), Postives = 90/188 (47.87%), Query Frame = 0


Query: 3   DGYSKIKAASKFKSRSIDYSDLSSLPHSLTFSAAVSNPTRTNRPQE-------------- 62
           +GYS+IK     KSRSID+SDL SLP   TF   + N     + Q+              
Sbjct: 2   NGYSRIKFIGSNKSRSIDFSDLISLPQ--TFKPTIPNHPSNKKTQQTNQIIINPSSPLQS 61

Query: 63  PPHGRLPEEDEEVNDDECDRPRGATTAAATLCRNSSVSS-------SVSGFQSAVKRALS 122
           PP+ +   E+ E              +   L RNSSVSS       + +  QSAVKRA S
Sbjct: 62  PPNPKFEHENGE-------------RSGVVLTRNSSVSSHRLYAQGNKTTVQSAVKRAFS 121

Query: 123 MRRSSSVAERYCRIHDQFATFASPIEDDEMEGGDWKERGKIGGSEIRKXXXXXNAAEKIV 170
           MRRSSSV ERYCRIHDQ  T ASP+++             +    +RK         KI+
Sbjct: 122 MRRSSSVTERYCRIHDQCDTLASPLDEXXXXXXXXXXHYTVQARSVRKKKKQSRTG-KIL 173

[Close]

BLAST of CsaV3_3G006440 vs. TAIR10
Match: AT4G24275.1 (Identified as a screen for stress-responsive genes.)

HSP 1 Score: 45.8 bits (107), Expect = 3.0e-05
Identity = 45/116 (38.79%), Postives = 56/116 (48.28%), Query Frame = 0


Query: 56  EEDEEVNDDECDRP-RGATTAAATLCRNSSVSSSVSGFQSAVKRALSMRRSSSVAERYCR 115
           E D  V D +  +P          L RN SVS+S     S +K  +SMRRSSSV+ERYCR
Sbjct: 15  EPDHPVVDPQIQKPDLEPAEMKPKLSRNRSVSASAQAVPSPIK--MSMRRSSSVSERYCR 74

Query: 116 IHDQFATFASPIEDDEMEGGDWKERGKIGGSEIRKXXXXXNAAEKIVRACKRIFGL 171
           I+DQ +    P+   E                   XXXXX A    V+ACKR FG+
Sbjct: 75  IYDQSSATTWPLPFHEXXXXXXXXXXXXXXXXXXXXXXXXKA---FVKACKRFFGI 125

[Close]

BLAST of CsaV3_3G006440 vs. TrEMBL
Match: tr|A0A0A0L2N9|A0A0A0L2N9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G110030 PE=4 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 2.0e-83
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0


Query: 1   MADGYSKIKAASKFKSRSIDYSDLSSLPHSLTFSAAVSNPTRTNRPQEPPHGRLPEEDEE 60
           MADGYSKIKAASKFKSRSIDYSDLSSLPHSLTFSAAVSNPTRTNRPQEPPHGRLPEEDEE
Sbjct: 1   MADGYSKIKAASKFKSRSIDYSDLSSLPHSLTFSAAVSNPTRTNRPQEPPHGRLPEEDEE 60

Query: 61  VNDDECDRPRGATTAAATLCRNSSVSSSVSGFQSAVKRALSMRRSSSVAERYCRIHDQFA 120
           VNDDECDRPRGATTAAATLCRNSSVSSSVSGFQSAVKRALSMRRSSSVAERYCRIHDQFA
Sbjct: 61  VNDDECDRPRGATTAAATLCRNSSVSSSVSGFQSAVKRALSMRRSSSVAERYCRIHDQFA 120

Query: 121 TFASPIEDDEMEGGDWKERGKIGGSEIRKXXXXXNAAEKIVRACKRIFGL 171
           TFASPIEDDEMEGGDWKERGKIGGSEIRKXXXXXNAAEKIVRACKRIFGL
Sbjct: 121 TFASPIEDDEMEGGDWKERGKIGGSEIRKXXXXXNAAEKIVRACKRIFGL 170

[Close]

BLAST of CsaV3_3G006440 vs. TrEMBL
Match: tr|A0A2N9II75|A0A2N9II75_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS41345 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 3.6e-16
Identity = 66/167 (39.52%), Postives = 88/167 (52.69%), Query Frame = 0


Query: 3   DGYSKIKAASKFKSRSIDYSDLSSLPHSLTFSAAVSNPTRTNRPQEPPHGRLPEEDEEVN 62
           +GY+KI+  +  KS+S+D+SD S  P   T S   S    TN+ ++       +      
Sbjct: 2   NGYAKIRIINTRKSKSVDFSDASLFPTKNTNSDHTSKHQETNQIKDTN----TKXXXXXX 61

Query: 63  DDECDRPRGATTAAATLCRNSSVSSSVSGFQSAVKRALSMRRSSSVAERYCRIHDQFATF 122
                   G +     + R+ SVSSS SGFQSA+KRA S+RRSSSV+ERYCRIHDQ  T 
Sbjct: 62  XXXXXXGNGESFGMVLMSRSLSVSSSTSGFQSAMKRAFSLRRSSSVSERYCRIHDQSVTL 121

Query: 123 ASPIEDDEMEGGDWKERGKIGGSEIRKXXXXXNAAEKIVRACKRIFG 170
            SPI+DDE+        G       R          KI++ACKR+FG
Sbjct: 122 TSPIDDDEV--------GDTMSGTRRSVKKSKYKGGKILKACKRLFG 156

[Close]

BLAST of CsaV3_3G006440 vs. TrEMBL
Match: tr|A0A2R6R1B8|A0A2R6R1B8_ACTCH (Flavin-dependent thymidylate synthase OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc10969 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 7.9e-16
Identity = 71/183 (38.80%), Postives = 94/183 (51.37%), Query Frame = 0


Query: 3   DGYSKIKAASKFKSRSIDYSDLSSLPHSLTFSAAVSNPTRTN---------RPQEPPHGR 62
           +GYS+IK     KSRSID+SDL SLP +L    + ++P+ T           P  P H  
Sbjct: 2   NGYSRIKFIGSTKSRSIDFSDLISLPQNLK-PKSPNHPSNTKTQQTNQIIINPYSPLHSP 61

Query: 63  LPEEDEEVNDDECDRPRGATTAAATLCRNSSVSS-------SVSGFQSAVKRALSMRRSS 122
              + E  N +          +   L RNSSVSS       + + FQ AVKR  SMRRSS
Sbjct: 62  PSPKFEHENGER---------SGVVLTRNSSVSSHRFYKKGNKTTFQLAVKRVFSMRRSS 121

Query: 123 SVAERYCRIHDQFATFASPIEDDEMEGGDWKERGKIGGSEIRKXXXXXNAAEKIVRACKR 170
           SV ERYCRIHDQ  T  +P ++DE   G++  + +     +RK         KI++ACK 
Sbjct: 122 SVTERYCRIHDQCVTLPTPFDEDEEGVGNYTVQAR----SVRKKKRQSRTGGKILKACKG 170

[Close]

BLAST of CsaV3_3G006440 vs. TrEMBL
Match: tr|A0A2R6Q1M3|A0A2R6Q1M3_ACTCH (Phospho-N-acetylmuramoyl-pentapeptide-transferase OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc24263 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.5e-14
Identity = 71/188 (37.77%), Postives = 90/188 (47.87%), Query Frame = 0


Query: 3   DGYSKIKAASKFKSRSIDYSDLSSLPHSLTFSAAVSNPTRTNRPQE-------------- 62
           +GYS+IK     KSRSID+SDL SLP   TF   + N     + Q+              
Sbjct: 2   NGYSRIKFIGSNKSRSIDFSDLISLPQ--TFKPTIPNHPSNKKTQQTNQIIINPSSPLQS 61

Query: 63  PPHGRLPEEDEEVNDDECDRPRGATTAAATLCRNSSVSS-------SVSGFQSAVKRALS 122
           PP+ +   E+ E              +   L RNSSVSS       + +  QSAVKRA S
Sbjct: 62  PPNPKFEHENGE-------------RSGVVLTRNSSVSSHRLYAQGNKTTVQSAVKRAFS 121

Query: 123 MRRSSSVAERYCRIHDQFATFASPIEDDEMEGGDWKERGKIGGSEIRKXXXXXNAAEKIV 170
           MRRSSSV ERYCRIHDQ  T ASP+++             +    +RK         KI+
Sbjct: 122 MRRSSSVTERYCRIHDQCDTLASPLDEXXXXXXXXXXHYTVQARSVRKKKKQSRTG-KIL 173

[Close]

BLAST of CsaV3_3G006440 vs. TrEMBL
Match: tr|A0A2N9GVQ0|A0A2N9GVQ0_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS31246 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 4.4e-14
Identity = 63/164 (38.41%), Postives = 84/164 (51.22%), Query Frame = 0


Query: 6   SKIKAASKFKSRSIDYSDLSSLPHSLTFSAAVSNPTRTNRPQEPPHGRLPEEDEEVNDDE 65
           + I+  +  KS+S+D+SD S  P   T S   S    TN+ ++       +         
Sbjct: 21  ANIRIINTRKSKSVDFSDASLFPTKNTDSDHTSKHQETNQIKDTN----TKXXXXXXXXX 80

Query: 66  CDRPRGATTAAATLCRNSSVSSSVSGFQSAVKRALSMRRSSSVAERYCRIHDQFATFASP 125
                G +     + R+ SVSSS SGFQSA+KRA S+RRSSSV+ERYCRIHDQ  T  SP
Sbjct: 81  XXXXNGESFGMVLMSRSLSVSSSTSGFQSAMKRAFSLRRSSSVSERYCRIHDQSVTLTSP 140

Query: 126 IEDDEMEGGDWKERGKIGGSEIRKXXXXXNAAEKIVRACKRIFG 170
           I+DDE+        G       R          KI++ACKR+FG
Sbjct: 141 IDDDEV--------GDTMSGTRRSVKKNKYKGGKILKACKRLFG 172

The following BLAST results are available for this feature:

BLAST of CsaV3_3G006440 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN56255.1	3.0e-83	100.00	hypothetical protein Csa_3G110030 [Cucumis sativus]	[more]
XP_022136741.1	1.3e-30	54.97	uncharacterized protein LOC111008371 [Momordica charantia]	[more]
XP_022929198.1	1.6e-20	50.00	uncharacterized protein LOC111435863 [Cucurbita moschata]	[more]
PSS19027.1	1.2e-15	38.80	Flavin-dependent thymidylate synthase [Actinidia chinensis var. chinensis]	[more]
PSS00295.1	2.3e-14	37.77	Phospho-N-acetylmuramoyl-pentapeptide-transferase [Actinidia chinensis var. chin...	[more]

BLAST of CsaV3_3G006440 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G24275.1	3.0e-05	38.79	Identified as a screen for stress-responsive genes.	[more]

BLAST of CsaV3_3G006440 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsaV3_3G006440 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L2N9\|A0A0A0L2N9_CUCSA	2.0e-83	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G110030 PE=4 SV=1	[more]
tr\|A0A2N9II75\|A0A2N9II75_FAGSY	3.6e-16	39.52	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS41345 PE=4 SV=1	[more]
tr\|A0A2R6R1B8\|A0A2R6R1B8_ACTCH	7.9e-16	38.80	Flavin-dependent thymidylate synthase OS=Actinidia chinensis var. chinensis OX=1...	[more]
tr\|A0A2R6Q1M3\|A0A2R6Q1M3_ACTCH	1.5e-14	37.77	Phospho-N-acetylmuramoyl-pentapeptide-transferase OS=Actinidia chinensis var. ch...	[more]
tr\|A0A2N9GVQ0\|A0A2N9GVQ0_FAGSY	4.4e-14	38.41	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS31246 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G006440.1	CsaV3_3G006440.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..73
None	No IPR available	PANTHER	PTHR38386	FAMILY NOT NAMED	coord: 1..170

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_3G006440	CSPI03G06290	Wild cucumber (PI 183967)	cpicucB144
CsaV3_3G006440	Cucsa.114150	Cucumber (Gy14) v1	cgycucB151
CsaV3_3G006440	CmaCh16G007720	Cucurbita maxima (Rimu)	cmacucB0382
CsaV3_3G006440	CmaCh04G008950	Cucurbita maxima (Rimu)	cmacucB0837
CsaV3_3G006440	CmoCh16G008360	Cucurbita moschata (Rifu)	cmocucB0380
CsaV3_3G006440	CmoCh04G009610	Cucurbita moschata (Rifu)	cmocucB0822
CsaV3_3G006440	Cp4.1LG14g00430	Cucurbita pepo (Zucchini)	cpecucB0258
CsaV3_3G006440	Cp4.1LG01g08460	Cucurbita pepo (Zucchini)	cpecucB0491
CsaV3_3G006440	CsGy3G006420	Cucumber (Gy14) v2	cgybcucB117
CsaV3_3G006440	Carg25387	Silver-seed gourd	carcucB0597
CsaV3_3G006440	Carg00013	Silver-seed gourd	carcucB0698
CsaV3_3G006440	Cla011807	Watermelon (97103) v1	cucwmB233
CsaV3_3G006440	MELO3C016497	Melon (DHL92) v3.5.1	cucmeB248
CsaV3_3G006440	ClCG10G007120	Watermelon (Charleston Gray)	cucwcgB194
CsaV3_3G006440	Lsi05G007350	Bottle gourd (USVL1VR-Ls)	cuclsiB235
CsaV3_3G006440	MELO3C016497.2	Melon (DHL92) v3.6.1	cucmedB232
CsaV3_3G006440	Cla97C10G190910	Watermelon (97103) v2	cucwmbB182
CsaV3_3G006440	Bhi11G000603	Wax gourd	cucwgoB249

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_3G006440	Bottle gourd (USVL1VR-Ls)	cuclsiB217
CsaV3_3G006440	Wax gourd	cucwgoB233