Csa3G110030 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa3G110030
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Unknown protein
Location	Chr3 : 5417965 .. 5418554 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGATAAATCGCTACGCATTTCTCTATCATTTTCCGCCATAATTTCTCCACAATCCCCAAACTCAAGAAAAAAGAAAATGGCGGATGGTTATTCCAAAATCAAAGCAGCTTCCAAATTCAAATCAAGATCCATCGATTACTCCGATCTCTCCTCTCTTCCTCACTCTCTCACTTTCAGTGCCGCCGTCTCCAATCCCACCCGGACAAATCGGCCGCAGGAGCCACCGCACGGCCGCTTACCGGAGGAAGACGAAGAAGTAAACGACGACGAATGCGATCGGCCCCGTGGAGCCACCACCGCCGCCGCTACACTTTGTCGAAACAGCTCTGTTTCATCATCGGTTTCCGGATTTCAGTCTGCAGTGAAAAGAGCACTATCGATGCGGAGATCTTCATCCGTAGCGGAACGGTACTGTAGGATTCACGATCAGTTCGCGACATTTGCATCGCCGATCGAGGATGATGAAATGGAAGGGGGAGACTGGAAGGAAAGAGGAAAAATAGGAGGATCTGAGATAAGGAAGAAGAAGAAGAAGAAGAACGCGGCAGAGAAGATCGTTAGAGCATGTAAGCGAATTTTTGGACTGTAG

mRNA sequence

ATGGCGGATGGTTATTCCAAAATCAAAGCAGCTTCCAAATTCAAATCAAGATCCATCGATTACTCCGATCTCTCCTCTCTTCCTCACTCTCTCACTTTCAGTGCCGCCGTCTCCAATCCCACCCGGACAAATCGGCCGCAGGAGCCACCGCACGGCCGCTTACCGGAGGAAGACGAAGAAGTAAACGACGACGAATGCGATCGGCCCCGTGGAGCCACCACCGCCGCCGCTACACTTTGTCGAAACAGCTCTGTTTCATCATCGGTTTCCGGATTTCAGTCTGCAGTGAAAAGAGCACTATCGATGCGGAGATCTTCATCCGTAGCGGAACGGTACTGTAGGATTCACGATCAGTTCGCGACATTTGCATCGCCGATCGAGGATGATGAAATGGAAGGGGGAGACTGGAAGGAAAGAGGAAAAATAGGAGGATCTGAGATAAGGAAGAAGAAGAAGAAGAAGAACGCGGCAGAGAAGATCGTTAGAGCATGTAAGCGAATTTTTGGACTGTAG

Coding sequence (CDS)

ATGGCGGATGGTTATTCCAAAATCAAAGCAGCTTCCAAATTCAAATCAAGATCCATCGATTACTCCGATCTCTCCTCTCTTCCTCACTCTCTCACTTTCAGTGCCGCCGTCTCCAATCCCACCCGGACAAATCGGCCGCAGGAGCCACCGCACGGCCGCTTACCGGAGGAAGACGAAGAAGTAAACGACGACGAATGCGATCGGCCCCGTGGAGCCACCACCGCCGCCGCTACACTTTGTCGAAACAGCTCTGTTTCATCATCGGTTTCCGGATTTCAGTCTGCAGTGAAAAGAGCACTATCGATGCGGAGATCTTCATCCGTAGCGGAACGGTACTGTAGGATTCACGATCAGTTCGCGACATTTGCATCGCCGATCGAGGATGATGAAATGGAAGGGGGAGACTGGAAGGAAAGAGGAAAAATAGGAGGATCTGAGATAAGGAAGAAGAAGAAGAAGAAGAACGCGGCAGAGAAGATCGTTAGAGCATGTAAGCGAATTTTTGGACTGTAG

Protein sequence

MADGYSKIKAASKFKSRSIDYSDLSSLPHSLTFSAAVSNPTRTNRPQEPPHGRLPEEDEEVNDDECDRPRGATTAAATLCRNSSVSSSVSGFQSAVKRALSMRRSSSVAERYCRIHDQFATFASPIEDDEMEGGDWKERGKIGGSEIRKKKKKKNAAEKIVRACKRIFGL*

Homology

[Close]

BLAST of Csa3G110030 vs. TrEMBL
Match: A0A0A0L2N9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G110030 PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 9.1e-91
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 1


Query: 1   MADGYSKIKAASKFKSRSIDYSDLSSLPHSLTFSAAVSNPTRTNRPQEPPHGRLPEEDEE 60
           MADGYSKIKAASKFKSRSIDYSDLSSLPHSLTFSAAVSNPTRTNRPQEPPHGRLPEEDEE
Sbjct: 1   MADGYSKIKAASKFKSRSIDYSDLSSLPHSLTFSAAVSNPTRTNRPQEPPHGRLPEEDEE 60

Query: 61  VNDDECDRPRGATTAAATLCRNSSVSSSVSGFQSAVKRALSMRRSSSVAERYCRIHDQFA 120
           VNDDECDRPRGATTAAATLCRNSSVSSSVSGFQSAVKRALSMRRSSSVAERYCRIHDQFA
Sbjct: 61  VNDDECDRPRGATTAAATLCRNSSVSSSVSGFQSAVKRALSMRRSSSVAERYCRIHDQFA 120

Query: 121 TFASPIEDDEMEGGDWKERGKIGGSEIRKKKKKKNAAEKIVRACKRIFGL 171
           TFASPIEDDEMEGGDWKERGKIGGSEIRKKKKKKNAAEKIVRACKRIFGL
Sbjct: 121 TFASPIEDDEMEGGDWKERGKIGGSEIRKKKKKKNAAEKIVRACKRIFGL 170

[Close]

BLAST of Csa3G110030 vs. TrEMBL
Match: A0A061DXA0_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_006157 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.5e-21
Identity = 75/182 (41.21%), Postives = 103/182 (56.59%), Query Frame = 1


Query: 3   DGYSKIKAASKFKSRSIDYSDLSSLPHSLTFSAAVSNPTRTNRPQE-------------- 62
           +GYSK+KA     SRS+D SDL  LP +    ++++ P  T + QE              
Sbjct: 2   NGYSKMKAVGNGSSRSMDSSDLMPLPQTPKPISSIT-PNHTEKNQEINQVVIKNSNPITT 61

Query: 63  PPHGRLPEEDEEVNDDECDRPRGATTAAATLCRNSSVSSSVSGFQSAVKRALSMRRSSSV 122
                  E+++E N++E   P+        L RNSSVSSS +  Q+AVKRA SMRRSSSV
Sbjct: 62  QQDSSEQEDEQEGNNEEMFGPK--------LRRNSSVSSSYA-LQAAVKRAFSMRRSSSV 121

Query: 123 AERYCRIHDQFATFASPIEDDEMEGGDWKERGKIGGSEIRKKKKKKNAAEKIVRACKRIF 171
           +ERYCRIHDQ  T ASP +D+E++    +          R  KKKKN+  KI++A K++F
Sbjct: 122 SERYCRIHDQSVTLASPFDDEELDTTGTR----------RSAKKKKNSRGKILKAWKKLF 163

[Close]

BLAST of Csa3G110030 vs. TrEMBL
Match: M5XW66_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024829mg PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 8.4e-20
Identity = 78/181 (43.09%), Postives = 99/181 (54.70%), Query Frame = 1


Query: 3   DGYSKIKAASKFKSRSIDYSDLSSLPHSLTFSAAVSNPTR----TN---RPQEPPHGRLP 62
           D YSKI   S+  SRSID+SDL S   +   S   +NPT+    TN   +       +  
Sbjct: 2   DKYSKIMRHSQ-NSRSIDFSDLVSFSPTQK-SNTTTNPTKKTQETNLQIKKNSTTQDQKG 61

Query: 63  EEDEEVNDDECDRPRGATTAAATLCRNSSVSSS----VSGFQSAVKRALSMRRSSSVAER 122
           +ED+E   +      G+  A   L RN+S+SSS     SGFQSA K A SMRRSSSV+ER
Sbjct: 62  DEDDEQQGNSVGESFGSVVA---LKRNNSISSSSSLAASGFQSAFKGAFSMRRSSSVSER 121

Query: 123 YCRIHDQFAT--FASPIEDDEMEGGDWKERGKIGGSEIRKKKKKKNAAEKIVRACKRIFG 171
           YCRIHDQ  T   +SPI+DDE +   W            +  KKK+   KI++ACKR FG
Sbjct: 122 YCRIHDQSTTTLTSSPIDDDEDQAAAW---------GTTRSMKKKHKGGKILKACKRFFG 168

[Close]

BLAST of Csa3G110030 vs. TrEMBL
Match: W9QEB7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_001375 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 3.5e-18
Identity = 70/153 (45.75%), Postives = 94/153 (61.44%), Query Frame = 1


Query: 22  SDLSSLPHSLTFSAAVSNPTRTNRPQEPPHGRLPEEDEEVNDD---ECDRPR-GATTAAA 81
           +D SS   SL+ S++ S+P + N   +       EE E VN D   + D+   G+++  A
Sbjct: 66  ADNSSSSSSLSSSSS-SSPRKRNDDHDHR-----EEVENVNGDIARKADKAAFGSSSNNA 125

Query: 82  TLCRNSSVSSSVSGFQSAVKRALSMRRSSSVAERYCRIHDQFATFASPIEDDEMEGGDWK 141
            L RNSSVS+S+S    AVKR LSMRRSSSV+ERYCRIHDQ  T ASPI+D++ E     
Sbjct: 126 VLGRNSSVSNSMS----AVKRVLSMRRSSSVSERYCRIHDQSVTLASPIDDEDDE----- 185

Query: 142 ERGKIGGSEIRKKKKKKNAAEKIVRACKRIFGL 171
               +   + R  KKKK+   KI++ACKR+FGL
Sbjct: 186 ----LEEDKTRSGKKKKHGGGKILKACKRLFGL 199

[Close]

BLAST of Csa3G110030 vs. TrEMBL
Match: A0A166GLL0_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_001747 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 7.8e-18
Identity = 67/177 (37.85%), Postives = 91/177 (51.41%), Query Frame = 1


Query: 5   YSKIKAASKF-KSRSIDYSDLSSLPHSLTFSAAVSNPTRTNRPQEPPHGRLPEEDEEVND 64
           YSK+K  +   KSRS+D+SDL S P         + P  T    + P  ++    +++N+
Sbjct: 4   YSKMKLVNNSTKSRSMDFSDLQSFPLETKIP---TEPQHTKIKTQEPKTQINNTLQKLNE 63

Query: 65  DECDRPRG-ATTAAATLCRNSSVSSSVSGFQ---------SAVKRALSMRRSSSVAERYC 124
           +E +      +   A L RN SVS + S            SAVKR  SMRRSSSV+ERYC
Sbjct: 64  EEHNNNSSEGSFGMAKLSRNRSVSVNTSSLNMFKIEKQGSSAVKRVFSMRRSSSVSERYC 123

Query: 125 RIHDQFATFASPIEDDEMEGGDWKERGKIGGSEIRKKKKKKNAAEKIVRACKRIFGL 171
           RIHDQ  T ASP+ DDE                   KKKKK ++  I++ACKR+ G+
Sbjct: 124 RIHDQAVTVASPLHDDE------------DAHSTSVKKKKKYSSSSILKACKRLLGI 165

[Close]

BLAST of Csa3G110030 vs. TAIR10
Match: AT4G24275.1 (AT4G24275.1 Identified as a screen for stress-responsive genes.)

HSP 1 Score: 73.2 bits (178), Expect = 1.8e-13
Identity = 51/120 (42.50%), Postives = 63/120 (52.50%), Query Frame = 1


Query: 56  EEDEEVNDDECDRPR-GATTAAATLCRNSSVSSSVSGFQSAVKRALSMRRSSSVAERYCR 115
           E D  V D +  +P          L RN SVS+S     S +K  +SMRRSSSV+ERYCR
Sbjct: 15  EPDHPVVDPQIQKPDLEPAEMKPKLSRNRSVSASAQAVPSPIK--MSMRRSSSVSERYCR 74

Query: 116 IHDQFATFASPI---EDDEMEGGDWKERGKIGGSEIRKKKKKKNAAEK-IVRACKRIFGL 171
           I+DQ +    P+   E DE E  D KE+       + KKKK  N  +K  V+ACKR FG+
Sbjct: 75  IYDQSSATTWPLPFHEGDEDEDDDDKEK-------VHKKKKSNNFKKKAFVKACKRFFGI 125

[Close]

BLAST of Csa3G110030 vs. NCBI nr
Match: gi|700201122|gb|KGN56255.1| (hypothetical protein Csa_3G110030 [Cucumis sativus])

HSP 1 Score: 340.9 bits (873), Expect = 1.3e-90
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 1


Query: 1   MADGYSKIKAASKFKSRSIDYSDLSSLPHSLTFSAAVSNPTRTNRPQEPPHGRLPEEDEE 60
           MADGYSKIKAASKFKSRSIDYSDLSSLPHSLTFSAAVSNPTRTNRPQEPPHGRLPEEDEE
Sbjct: 1   MADGYSKIKAASKFKSRSIDYSDLSSLPHSLTFSAAVSNPTRTNRPQEPPHGRLPEEDEE 60

Query: 61  VNDDECDRPRGATTAAATLCRNSSVSSSVSGFQSAVKRALSMRRSSSVAERYCRIHDQFA 120
           VNDDECDRPRGATTAAATLCRNSSVSSSVSGFQSAVKRALSMRRSSSVAERYCRIHDQFA
Sbjct: 61  VNDDECDRPRGATTAAATLCRNSSVSSSVSGFQSAVKRALSMRRSSSVAERYCRIHDQFA 120

Query: 121 TFASPIEDDEMEGGDWKERGKIGGSEIRKKKKKKNAAEKIVRACKRIFGL 171
           TFASPIEDDEMEGGDWKERGKIGGSEIRKKKKKKNAAEKIVRACKRIFGL
Sbjct: 121 TFASPIEDDEMEGGDWKERGKIGGSEIRKKKKKKNAAEKIVRACKRIFGL 170

[Close]

BLAST of Csa3G110030 vs. NCBI nr
Match: gi|590681929|ref|XP_007041211.1| (Uncharacterized protein TCM_006157 [Theobroma cacao])

HSP 1 Score: 110.9 bits (276), Expect = 2.2e-21
Identity = 75/182 (41.21%), Postives = 103/182 (56.59%), Query Frame = 1


Query: 3   DGYSKIKAASKFKSRSIDYSDLSSLPHSLTFSAAVSNPTRTNRPQE-------------- 62
           +GYSK+KA     SRS+D SDL  LP +    ++++ P  T + QE              
Sbjct: 2   NGYSKMKAVGNGSSRSMDSSDLMPLPQTPKPISSIT-PNHTEKNQEINQVVIKNSNPITT 61

Query: 63  PPHGRLPEEDEEVNDDECDRPRGATTAAATLCRNSSVSSSVSGFQSAVKRALSMRRSSSV 122
                  E+++E N++E   P+        L RNSSVSSS +  Q+AVKRA SMRRSSSV
Sbjct: 62  QQDSSEQEDEQEGNNEEMFGPK--------LRRNSSVSSSYA-LQAAVKRAFSMRRSSSV 121

Query: 123 AERYCRIHDQFATFASPIEDDEMEGGDWKERGKIGGSEIRKKKKKKNAAEKIVRACKRIF 171
           +ERYCRIHDQ  T ASP +D+E++    +          R  KKKKN+  KI++A K++F
Sbjct: 122 SERYCRIHDQSVTLASPFDDEELDTTGTR----------RSAKKKKNSRGKILKAWKKLF 163

[Close]

BLAST of Csa3G110030 vs. NCBI nr
Match: gi|731411427|ref|XP_010657977.1| (PREDICTED: uncharacterized protein LOC104881045 [Vitis vinifera])

HSP 1 Score: 106.3 bits (264), Expect = 5.4e-20
Identity = 80/179 (44.69%), Postives = 101/179 (56.42%), Query Frame = 1


Query: 3   DGYSKIK--AASKFKSRSIDYSDLSSLPHSLTFSAAVSNPTRTNRP-QEPPHGRLPE--E 62
           +GY K+K       KSRS+D++DL S P +         P  T  P  + P+   P    
Sbjct: 2   NGYPKMKFLRCRSTKSRSMDFADLLSFPQT---------PKNTQNPTSKTPYANKPTTAH 61

Query: 63  DEEVNDDECDRPRGATTAAATLCRNSSVSSSVSGFQSAVKRALSMRRSSSVAERYCRIHD 122
           D   + D+ D  +G +     L RNSSV+S+ S  QSAVKRA SMRRSSSV+ERYCRIHD
Sbjct: 62  DSVSDPDDEDGIKGGSFGGV-LRRNSSVTSAAS-LQSAVKRAFSMRRSSSVSERYCRIHD 121

Query: 123 QFAT--FASP---IEDDE-MEGGDWKERGKIGGSEIRKKKKKKNAAEKIVRACKRIFGL 171
           Q AT    SP   I+D+E M+GG  K R       + KK KKK    KI +ACKR+FGL
Sbjct: 122 QSATAFLQSPPNNIDDEESMDGGTMKTR------SMEKKMKKKQKNGKIFKACKRLFGL 163

[Close]

BLAST of Csa3G110030 vs. NCBI nr
Match: gi|596253096|ref|XP_007224729.1| (hypothetical protein PRUPE_ppa024829mg [Prunus persica])

HSP 1 Score: 105.1 bits (261), Expect = 1.2e-19
Identity = 78/181 (43.09%), Postives = 99/181 (54.70%), Query Frame = 1


Query: 3   DGYSKIKAASKFKSRSIDYSDLSSLPHSLTFSAAVSNPTR----TN---RPQEPPHGRLP 62
           D YSKI   S+  SRSID+SDL S   +   S   +NPT+    TN   +       +  
Sbjct: 2   DKYSKIMRHSQ-NSRSIDFSDLVSFSPTQK-SNTTTNPTKKTQETNLQIKKNSTTQDQKG 61

Query: 63  EEDEEVNDDECDRPRGATTAAATLCRNSSVSSS----VSGFQSAVKRALSMRRSSSVAER 122
           +ED+E   +      G+  A   L RN+S+SSS     SGFQSA K A SMRRSSSV+ER
Sbjct: 62  DEDDEQQGNSVGESFGSVVA---LKRNNSISSSSSLAASGFQSAFKGAFSMRRSSSVSER 121

Query: 123 YCRIHDQFAT--FASPIEDDEMEGGDWKERGKIGGSEIRKKKKKKNAAEKIVRACKRIFG 171
           YCRIHDQ  T   +SPI+DDE +   W            +  KKK+   KI++ACKR FG
Sbjct: 122 YCRIHDQSTTTLTSSPIDDDEDQAAAW---------GTTRSMKKKHKGGKILKACKRFFG 168

[Close]

BLAST of Csa3G110030 vs. NCBI nr
Match: gi|743908871|ref|XP_011047899.1| (PREDICTED: uncharacterized protein LOC105142118 [Populus euphratica])

HSP 1 Score: 100.5 bits (249), Expect = 3.0e-18
Identity = 65/182 (35.71%), Postives = 93/182 (51.10%), Query Frame = 1


Query: 3   DGYSKIKAASKFKSRSIDYSDLSSLPHSLTFSAAVSNPTRTNRPQEPPHGRLPEED---- 62
           +GYSKIK     +SRS+D+SDLS          A   PT++N   +  H  + + D    
Sbjct: 2   NGYSKIKIFGTARSRSMDFSDLS---------LAFPEPTKSNTEPQETHKIVCDHDNTKK 61

Query: 63  ----------EEVNDDECDRPRGATTAAATLCRNSSVSSSVSGFQSAVKRALSMRRSSSV 122
                     + ++  E D             R+SSVSSS S  QSAVK+A + RRS SV
Sbjct: 62  NMISTGTTTQDSLSVLEEDEETNVGEGFGVKLRSSSVSSSASALQSAVKKAFAARRSCSV 121

Query: 123 AERYCRIHDQFATFASPIEDDEMEGGDWKERGKIGGSEIRKKKKKKNAAEKIVRACKRIF 171
           +ERYCRIHDQ AT +SPI D++         G +   E  +   KK++  + ++ CK++F
Sbjct: 122 SERYCRIHDQSATLSSPIHDED---------GTLDTMESTRSVTKKHSRGRFLKVCKKLF 165

The following BLAST results are available for this feature:

BLAST of Csa3G110030 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L2N9_CUCSA	9.1e-91	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G110030 PE=4 SV=1	[more]
A0A061DXA0_THECC	1.5e-21	41.21	Uncharacterized protein OS=Theobroma cacao GN=TCM_006157 PE=4 SV=1	[more]
M5XW66_PRUPE	8.4e-20	43.09	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024829mg PE=4 SV=1	[more]
W9QEB7_9ROSA	3.5e-18	45.75	Uncharacterized protein OS=Morus notabilis GN=L484_001375 PE=4 SV=1	[more]
A0A166GLL0_DAUCA	7.8e-18	37.85	Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_001747 PE=4 SV=1	[more]

BLAST of Csa3G110030 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G24275.1	1.8e-13	42.50	Identified as a screen for stress-responsive genes.	[more]

BLAST of Csa3G110030 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700201122\|gb\|KGN56255.1\|	1.3e-90	100.00	hypothetical protein Csa_3G110030 [Cucumis sativus]	[more]
gi\|590681929\|ref\|XP_007041211.1\|	2.2e-21	41.21	Uncharacterized protein TCM_006157 [Theobroma cacao]	[more]
gi\|731411427\|ref\|XP_010657977.1\|	5.4e-20	44.69	PREDICTED: uncharacterized protein LOC104881045 [Vitis vinifera]	[more]
gi\|596253096\|ref\|XP_007224729.1\|	1.2e-19	43.09	hypothetical protein PRUPE_ppa024829mg [Prunus persica]	[more]
gi\|743908871\|ref\|XP_011047899.1\|	3.0e-18	35.71	PREDICTED: uncharacterized protein LOC105142118 [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005515	protein binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU088202	cucumber EST collection version 3.0	transcribed_cluster
CU126286	cucumber EST collection version 3.0	transcribed_cluster
CU130374	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa3G110030.1	Csa3G110030.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU088202	CU088202	transcribed_cluster
CU126286	CU126286	transcribed_cluster
CU130374	CU130374	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR38386	FAMILY NOT NAMED	coord: 79..170 score: 5.5
None	No IPR available	PANTHER	PTHR38386:SF1	SUBFAMILY NOT NAMED	coord: 79..170 score: 5.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa3G110030	Cla011807	Watermelon (97103) v1	cuwmB226
Csa3G110030	MELO3C016497	Melon (DHL92) v3.5.1	cumeB244
Csa3G110030	ClCG10G007120	Watermelon (Charleston Gray)	cuwcgB189
Csa3G110030	Lsi05G007350	Bottle gourd (USVL1VR-Ls)	culsiB217
Csa3G110030	MELO3C016497.2	Melon (DHL92) v3.6.1	cumedB225
Csa3G110030	Cla97C10G190910	Watermelon (97103) v2	cuwmbB181
Csa3G110030	Bhi11G000603	Wax gourd	cuwgoB244
Csa3G110030	CSPI03G06290	Wild cucumber (PI 183967)	cpicuB120
Csa3G110030	Cucsa.114150	Cucumber (Gy14) v1	cgycuB145
Csa3G110030	CmaCh04G008950	Cucurbita maxima (Rimu)	cmacuB702
Csa3G110030	CmaCh16G007720	Cucurbita maxima (Rimu)	cmacuB328
Csa3G110030	CmoCh16G008360	Cucurbita moschata (Rifu)	cmocuB318
Csa3G110030	CmoCh04G009610	Cucurbita moschata (Rifu)	cmocuB693
Csa3G110030	Cp4.1LG01g08460	Cucurbita pepo (Zucchini)	cpecuB393
Csa3G110030	Cp4.1LG14g00430	Cucurbita pepo (Zucchini)	cpecuB215
Csa3G110030	CsGy3G006420	Cucumber (Gy14) v2	cgybcuB109
Csa3G110030	Carg25387	Silver-seed gourd	carcuB0589
Csa3G110030	Carg00013	Silver-seed gourd	carcuB0684

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa3G110030	Wax gourd	cuwgoB228
Csa3G110030	Bottle gourd (USVL1VR-Ls)	culsiB198