Cucsa.106780 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCATACCATACTTCTTCTCTCTATTATATCCCTTTCTGGGTTCCCTAAGAAAAaGAAAaCCCTCTCTTTCAGAAAAAAAaGTTTCAATTTTTTCATCTGGGTTTTGTGTCTCATTCTTGTTTCTCTTCAATTTCTTAGTTTTGCTTTTGTGGggTTTTtCCcTTTTTTtcTTTTTTtCTTTTTTTTttACTTTTTATGTAATTTTGATCCTCTAATATTTATAGAGTTATATTATATATATACCCTAACTACTTGGTAATTTGTTCTTTGGAGATCCATATCTAAATTCATGGATGATTTTGCTTCATCATCTTCTAGATTTCATCATCATGACTACTACAACAACAGCAACAACACAAGAATCAGAGATTTTGATGACGAACAACAACAACAGCAGCAACAACAACAAGATCAAGAAATGGAGGAAGAATCTTGTAACAACAGCAACAACAACAATTGTTCTATTTTTGTAGAGAAAGAGCATATGTTTGACAAAGTTGTAACACCAAGCGATGTGGGGAAACTAAACCGTTTAGTTATACCAAAACAACATGCTGAAAAATACTTCCCACTTGATTCTTCATCAAACGAAAAAGGTCTTCTCTTAAACTTCGAAGATCGTTGTGGTAAACTATGGCGGTTTCGTTACTCTTACTGGACTAGTAGCCAAAGCTATGTCATGACTAAAGGTTGGAGCCGCTTTGTCAAAGACAAAAGACTCGATGCTGGTGATATTGTTTCTTTTCAAAGACCCCTTCATCGTAATCAAGATCGTTTCTTTATCGATTGGCGACGCCGTCCTCCACACCCGGCTGTCGACATGCCTTTTCATTTCCACCGCCATGATGGTGGCACCGGTGCCGCCCAATTTCCTCCTCCTCCTCCTCATCATCACCATTTTCAGCTTCATAGCCAGTGGAATAATAATCCAGTGGCCACACCCTTATCTTTACAAAGGGACCACGTCCTCCACTTGCCACAGTATAATAATAATGTCAGTTTATTTCATAATACATATAATCATCATCATCATCATAATCGTTATCTTGACGGTTCGTATGGTGGAGCATCGGTCTTTTACCATTTGAGATCCCCAATCGCACCACCGCAGGTAGAGTCGGTGCCAGTTGTAGCGGATGGAAATGGTGGTAATGGTGGTGGAGGTAGTGGAATTGGGAGAACGTCTGCGGCTAAGACGACGTTGAGGCTTTTTGGTGTTGACATGGAATGTGAAGTATCTGATGATGAGTGTGACGTAGCCACAACTTCGAAGGCAATGTCATCGTCGTCGCAATTTCATGTTTATAATGGAATGCCGATGCCGATGTTGACACCGATGACGATGCAGATGCCCACGAGCAATAATAATATATCAACTATGGACTTCTTTGAGAAAGGGAAGTCGTCGATGTCGTCAATGTCATCTTTTGATTTTGGTGCTTGACAAACTGAATCCACACCTCCAAAGAAAAAACAAAGCTTCTTGGACAAATGAAGATGAAAATCAAACAGTAAGATACCTAATTTTACTCTATTTTAGTAATTTTTtCCTTTTCTTTTtCCTTTACCCTTATTTTTTTtATGGCTACATTCATGTAGGAAGAATCATTAGTCACTCAATTTTAAATCAAACACATGAACAAGGAAAATCAATGTGTAAAATGTTGAGTTATAGTTTAAATTTCTAGTTTTAGCTACATTATATATGATCATACCTCTTCTTCTTCTTCTTCTTTTTTTTTTTtGGTTTTGTAATCTCAAGTTTTTTtGTAGGGTATTTTTGGATTAAACTTCAGGAACAAGAGTTCATAGAGCATGTAAGTTTTAATGAATGAAAATTAAAGCACAAACAACTGGTGTTGTTAATTAAATTTTATTTTCTGTCAAAAAAAAAaaCATCCATTCATGATCATCTCAATTCAATATATTCCATGATTGTTCTTGAACATAAAATTGTGGAATTAAATTTTGTTTCTTATGTTTTTTTtCTTCTATAGGTGGTGATTGCTGCCTCTAATTCCTTGGACAAATTGTAAAAGCCCATGCAGGTTTTGACAGATAAAGTGTTGCTGAGAGATGGCCTTTTAAAAAGGTTAGTTTAATGTCATATAATTAAATTAACTTATTTTACACATTCTCTCTTGATTCATTATATTAACCATTTTGTTATGACCTCTTAAAAGAAACCAAATAGTTTGATTTAATAATGCAGTCGTTTTTCTAATAGGAAGTAATTTAGATAGTCTACTGATTTCATGAAAGCTTTCATGATAGTTGGATACAAATTATTTAAAATACTTTAATTGTTTTtCTCTTATAAATTTAATTAACGGTTATACAACAATCATATCACATTGTCATAATTATTTTAAATTATTCTTATTTTCTTACCCTCTTCAAACTTTAATTAGCAATGATGACAATGAAAAGTACATTTGTGTGTGTTTTTGTACACAGAATAGTAAAAACTTGATATATTATTTTTTCATTCTTTCTACACAGCATATTTTCATGTAATTTCTCAGCATTGTGATCCATTGTAGCAAACTGTTCCAGTTCATTGTTTTTtACTTAAAAAAAaTCTTGAGATCTATATGATTCATGTTATGAAAACCAAACATTGAAAATGATCCATATAATTTGCAACAATGTTTTAAAATGAAAGTTTtGGTTTTGGGACATGATGAGAAGTTAAAAATGTATCAACCTAGTTGATATGTTTCAATATACCTTGATTTCTCTTGTTCCTATCAGTATTGCTGTAATAAAATGGTTTTAAAATGAGAGTTGTTATGGTATTTGACACATTTTTAAAtATTTTTTTttGGTGGGATTGATGCCAATCAATTAGCCATAATTAAAGGATGCAGTTGACAGAAAAAAAaGGGTTAATTGAGTGAACCAATGACTAGTTTAGCTAAGTTAATTAAGTGTATCACCTAAAATCAATTTTCTTTCAGGTCATTTATTGCACAATTACACACACACAAAAAGAACACATATATACCATTTCTCAATTTCAGAAAGAAACCTTGAAAAGACCAAAAGTACTATCAACTTAGAAGCTTAATGATATGACTTCTTTTTATTACAATAATATAATTTTCTTTATTATAATAATATATACCTTAACCAGTATATATAACTATATGTTTAGTACCTTAAATAACATATTTAGCTTTTGTTGGGTAACGTTTTTGTTTTTGTTTCTGTTTTCTGTTTGTTCTTTCATTGGATTATTAAGAAATATGAAAAAGATATGTTTGTCCATAAAATTATATAGAATTGATGCAGTACTTTTTCATATCCAAAATTCTTTGTTTTGACATGAATTAAAGCTTTTAAGCATTCGAGTTCTGAGATATGTATATATTTCTTTTGCTTTGACAGTGTAGTCATGACTATATGAAAAGTTTGTGTATAACAAATTTCCTATTGATTACAAATAAATTATATATGATGAAAAAGTGATATTGGGGTTAATTTCATATAAAAGGGGAAAACATTTAGGATCGGTACTAAGACATAGAAATCACTTTAACCATTCTGAAGAGACTTCATTCATCATGCCTTACACCCTTACAATATTTTCTCTCTTATATTGTTTACATTTCAAGAGAAACCAAGAAAGATACCTTGAATTTGTATACCTTGTGATTAGTAAGAATTTTTTACTACACATCCACGAAAATATGATTATTATTATTATTGGCAAAGCAAGCTTAGTTTCACTGTAGTTAACATTACTTCGTTTTAAGGGTGGAAAGTTTGAAAATCCTCCAACCTCGTGGTACTTAAAAAAAACTCCCCCATTAGATAGTTTTTCTTTTTCTCTATGTTTTTCTCTCCATGTATAGCATTAGGAAGTATACTTTCTAGGTCGGGTTTGTTGAGGGTGCTTCTCGGTACTCCTTCTGACCTTAAACGTATATTTTTCGAGAATAAAAATAAAGAAATAGGGTAGTGTTTGAATACAAAAGTTGACAAAATATAACTATTGACCTAGATAGAGAATTAAGATTCCTCTTTATATATGTACCAAGATTATATGGGTGTTACACCCTTAGCTTATTTGTAAATTTGAATTCTCACTAACACCTTTTCCTTTGTGTGGCCTTTGTCCTTAAACAGAGAGAAAAAAaTTGTCAATGAATATAACAAGAGTCATTAATTTCTCTAGGCTAGAAATTAGGGTTATTGGTCAGAATGTTAAAGCATTGTTTGGACCAAAAAACATAGCAGCTAAGCCAATAACAAACAAAATGGGAAGACACAAATAATAATTATAATGTTATATATTGATCAATTGAAATCTGGGATCAAGCAGCATCCTTCCTTTAATTTGTCTGACACTATTTAATTCCATAAAAGTACATATTAATTTTCACACTTAAATTCTACTTAATAAAAATAAATCTAGTTGATACAATTACTACAAAAAGACAACAAATCTTTCTTTTTTTCTTGAGAAGGAATATTATTTATTTGAATATATACATGTGTGTGAATAATTCTTGTTCTTATGATGATATTTGTTCATCTCTCTTTTTTTtCTTTGGTGTTATTGTGCAGTTTTtGGATATATATATTGATATATATATATATATATAAATGTGGCAGTGGAAGCGAATTAATTCC CCATACCATACTTCTTCTCTCTATTATATCCCTTTCTGGGTTCCCTAAGAAAAAGAAAACCCTCTCTTTCAGAAAAAAAAGTTTCAATTTTTTCATCTGGGTTTTGTGTCTCATTCTTGTTTCTCTTCAATTTCTTAGTTTTGCTTTTGTGGGGtttttccctttttttctttttttcttttttttttactttttATGTAATTTTGATCCTCTAATATTTATAGAGTTATATTATATATATACCCTAACTACTTGGTAATTTGTTCTTTGGAGATCCATATCTAAATTCATGGATGATTTTGCTTCATCATCTTCTAGATTTCATCATCATGACTACTACAACAACAGCAACAACACAAGAATCAGAGATTTTGATGACGaacaacaacaacagcagcaacaacaacaaGATCAAGAAATGGAGGAAGAATCTTGTAACAACAGCAACAACAACAATTGTTCTATTTTTGTAGAGAAAGAGCATATGTTTGACAAAGTTGTAACACCAAGCGATGTGGGGAAACTAAACCGTTTAGTTATACCAAAACAACATGCTGAAAAATACTTCCCACTTGATTCTTCATCAAACGAAAAAGGTCTTCTCTTAAACTTCGAAGATCGTTGTGGTAAACTATGGCGGTTTCGTTACTCTTACTGGACTAGTAGCCAAAGCTATGTCATGACTAAAGGTTGGAGCCGCTTTGTCAAAGACAAAAGACTCGATGCTGGTGATATTGTTTCTTTTCAAAGACCCCTTCATCGTAATCAAGATCGTTTCTTTATCGATTGGCGACGCCGTCCTCCACACCCGGCTGTCGACATGCCTTTTCATTTCCACCGCCATGATGGTGGCACCGGTGCCGCCCAATTTCCTCCTCCTCCTCCTCATCATCACCATTTTCAGCTTCATAGCCAGTGGAATAATAATCCAGTGGCCACACCCTTATCTTTACAAAGGGACCACGTCCTCCACTTGCCACAGTATAATAATAATGTCAGTTTATTTCATAATACATATAATCATCATCATCATCATAATCGTTATCTTGACGGTTCGTATGGTGGAGCATCGGTCTTTTACCATTTGAGATCCCCAATCGCACCACCGCAGGTAGAGTCGGTGCCAGTTGTAGCGGATGGAAATGGTGGTAATGGTGGTGGAGGTAGTGGAATTGGGAGAACGTCTGCGGCTAAGACGACGTTGAGGCTTTTTGGTGTTGACATGGAATGTGAAGTATCTGATGATGAGTGTGACGTAGCCACAACTTCGAAGGCAATGTCATCGTCGTCGCAATTTCATGTTTATAATGGAATGCCGATGCCGATGTTGACACCGATGACGATGCAGATGCCCACGAGCAATAATAATATATCAACTATGGACTTCTTTGAGAAAGGGAAGTCGTCGATGTCGTCAATGTCATCTTTTGATTTTGGTGCTTGACAAACTGAATCCACACCTCCAAAGAAAAAACAAAGCTTCTTGGACAAATGAAGATGAAAATCAAACAGGTATTTTTGGATTAAACTTCAGGAACAAGAGTTCATAGAGCATGTGGTGATTGCTGCCTCTAATTCCTTGGACAAATTGTAAAAGCCCATGCAGGTTTTGACAGATAAAGTGTTGCTGAGAGATGGCCTTTTAAAAAGTTTTTGGatatatatattgatatatatatatatatataAATGTGGCAGTGGAAGCGAATTAATTCC ATGGATGATTTTGCTTCATCATCTTCTAGATTTCATCATCATGACTACTACAACAACAGCAACAACACAAGAATCAGAGATTTTGATGACGAACAACAACAACAGCAGCAACAACAACAAGATCAAGAAATGGAGGAAGAATCTTGTAACAACAGCAACAACAACAATTGTTCTATTTTTGTAGAGAAAGAGCATATGTTTGACAAAGTTGTAACACCAAGCGATGTGGGGAAACTAAACCGTTTAGTTATACCAAAACAACATGCTGAAAAATACTTCCCACTTGATTCTTCATCAAACGAAAAAGGTCTTCTCTTAAACTTCGAAGATCGTTGTGGTAAACTATGGCGGTTTCGTTACTCTTACTGGACTAGTAGCCAAAGCTATGTCATGACTAAAGGTTGGAGCCGCTTTGTCAAAGACAAAAGACTCGATGCTGGTGATATTGTTTCTTTTCAAAGACCCCTTCATCGTAATCAAGATCGTTTCTTTATCGATTGGCGACGCCGTCCTCCACACCCGGCTGTCGACATGCCTTTTCATTTCCACCGCCATGATGGTGGCACCGGTGCCGCCCAATTTCCTCCTCCTCCTCCTCATCATCACCATTTTCAGCTTCATAGCCAGTGGAATAATAATCCAGTGGCCACACCCTTATCTTTACAAAGGGACCACGTCCTCCACTTGCCACAGTATAATAATAATGTCAGTTTATTTCATAATACATATAATCATCATCATCATCATAATCGTTATCTTGACGGTTCGTATGGTGGAGCATCGGTCTTTTACCATTTGAGATCCCCAATCGCACCACCGCAGGTAGAGTCGGTGCCAGTTGTAGCGGATGGAAATGGTGGTAATGGTGGTGGAGGTAGTGGAATTGGGAGAACGTCTGCGGCTAAGACGACGTTGAGGCTTTTTGGTGTTGACATGGAATGTGAAGTATCTGATGATGAGTGTGACGTAGCCACAACTTCGAAGGCAATGTCATCGTCGTCGCAATTTCATGTTTATAATGGAATGCCGATGCCGATGTTGACACCGATGACGATGCAGATGCCCACGAGCAATAATAATATATCAACTATGGACTTCTTTGAGAAAGGGAAGTCGTCGATGTCGTCAATGTCATCTTTTGATTTTGGTGCTTGA MDDFASSSSRFHHHDYYNNSNNTRIRDFDDEQQQQQQQQQDQEMEEESCNNSNNNNCSIFVEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNEKGLLLNFEDRCGKLWRFRYSYWTSSQSYVMTKGWSRFVKDKRLDAGDIVSFQRPLHRNQDRFFIDWRRRPPHPAVDMPFHFHRHDGGTGAAQFPPPPPHHHHFQLHSQWNNNPVATPLSLQRDHVLHLPQYNNNVSLFHNTYNHHHHHNRYLDGSYGGASVFYHLRSPIAPPQVESVPVVADGNGGNGGGGSGIGRTSAAKTTLRLFGVDMECEVSDDECDVATTSKAMSSSSQFHVYNGMPMPMLTPMTMQMPTSNNNISTMDFFEKGKSSMSSMSSFDFGA*
BLAST of Cucsa.106780 vs. Swiss-Prot
Match: NGA3_ARATH (B3 domain-containing transcription factor NGA3 OS=Arabidopsis thaliana GN=NGA3 PE=2 SV=1) HSP 1 Score: 212.2 bits (539), Expect = 9.8e-54 Identity = 134/313 (42.81%), Postives = 169/313 (53.99%), Query Frame = 1
BLAST of Cucsa.106780 vs. Swiss-Prot
Match: Y3209_ORYSJ (B3 domain-containing protein Os03g0120900 OS=Oryza sativa subsp. japonica GN=Os03g0120900 PE=2 SV=1) HSP 1 Score: 206.8 bits (525), Expect = 4.1e-52 Identity = 127/263 (48.29%), Postives = 151/263 (57.41%), Query Frame = 1
BLAST of Cucsa.106780 vs. Swiss-Prot
Match: Y4814_ORYSJ (B3 domain-containing protein Os04g0581400 OS=Oryza sativa subsp. japonica GN=Os04g0581400 PE=3 SV=2) HSP 1 Score: 201.8 bits (512), Expect = 1.3e-50 Identity = 109/187 (58.29%), Postives = 126/187 (67.38%), Query Frame = 1
BLAST of Cucsa.106780 vs. Swiss-Prot
Match: NGA1_ARATH (B3 domain-containing transcription factor NGA1 OS=Arabidopsis thaliana GN=NGA1 PE=1 SV=1) HSP 1 Score: 199.5 bits (506), Expect = 6.6e-50 Identity = 105/168 (62.50%), Postives = 115/168 (68.45%), Query Frame = 1
BLAST of Cucsa.106780 vs. Swiss-Prot
Match: NGA2_ARATH (B3 domain-containing transcription factor NGA2 OS=Arabidopsis thaliana GN=NGA2 PE=2 SV=1) HSP 1 Score: 196.8 bits (499), Expect = 4.3e-49 Identity = 106/181 (58.56%), Postives = 128/181 (70.72%), Query Frame = 1
BLAST of Cucsa.106780 vs. TrEMBL
Match: A0A0A0KZM6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G047970 PE=4 SV=1) HSP 1 Score: 818.1 bits (2112), Expect = 4.4e-234 Identity = 383/383 (100.00%), Postives = 383/383 (100.00%), Query Frame = 1
BLAST of Cucsa.106780 vs. TrEMBL
Match: A0A058ZWL1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_L00348 PE=4 SV=1) HSP 1 Score: 255.8 bits (652), Expect = 8.6e-65 Identity = 171/367 (46.59%), Postives = 203/367 (55.31%), Query Frame = 1
BLAST of Cucsa.106780 vs. TrEMBL
Match: W9S0I8_9ROSA (B3 domain-containing transcription factor NGA1 OS=Morus notabilis GN=L484_024101 PE=4 SV=1) HSP 1 Score: 253.8 bits (647), Expect = 3.3e-64 Identity = 165/377 (43.77%), Postives = 204/377 (54.11%), Query Frame = 1
BLAST of Cucsa.106780 vs. TrEMBL
Match: A0A0S3T055_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.09G183200 PE=4 SV=1) HSP 1 Score: 253.4 bits (646), Expect = 4.3e-64 Identity = 176/438 (40.18%), Postives = 220/438 (50.23%), Query Frame = 1
BLAST of Cucsa.106780 vs. TrEMBL
Match: A0A0L9TFB6_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan635s004100 PE=4 SV=1) HSP 1 Score: 251.9 bits (642), Expect = 1.2e-63 Identity = 173/392 (44.13%), Postives = 204/392 (52.04%), Query Frame = 1
BLAST of Cucsa.106780 vs. TAIR10
Match: AT1G01030.1 (AT1G01030.1 AP2/B3-like transcriptional factor family protein) HSP 1 Score: 212.2 bits (539), Expect = 5.5e-55 Identity = 134/313 (42.81%), Postives = 169/313 (53.99%), Query Frame = 1
BLAST of Cucsa.106780 vs. TAIR10
Match: AT2G46870.1 (AT2G46870.1 AP2/B3-like transcriptional factor family protein) HSP 1 Score: 199.5 bits (506), Expect = 3.7e-51 Identity = 105/168 (62.50%), Postives = 115/168 (68.45%), Query Frame = 1
BLAST of Cucsa.106780 vs. TAIR10
Match: AT3G61970.1 (AT3G61970.1 AP2/B3-like transcriptional factor family protein) HSP 1 Score: 196.8 bits (499), Expect = 2.4e-50 Identity = 106/181 (58.56%), Postives = 128/181 (70.72%), Query Frame = 1
BLAST of Cucsa.106780 vs. TAIR10
Match: AT2G36080.1 (AT2G36080.1 AP2/B3-like transcriptional factor family protein) HSP 1 Score: 166.8 bits (421), Expect = 2.7e-41 Identity = 115/284 (40.49%), Postives = 142/284 (50.00%), Query Frame = 1
HSP 2 Score: 33.9 bits (76), Expect = 2.7e-01 Identity = 17/52 (32.69%), Postives = 27/52 (51.92%), Query Frame = 1
BLAST of Cucsa.106780 vs. TAIR10
Match: AT5G06250.2 (AT5G06250.2 AP2/B3-like transcriptional factor family protein) HSP 1 Score: 165.2 bits (417), Expect = 7.8e-41 Identity = 83/119 (69.75%), Postives = 94/119 (78.99%), Query Frame = 1
BLAST of Cucsa.106780 vs. NCBI nr
Match: gi|778690845|ref|XP_011653180.1| (PREDICTED: B3 domain-containing transcription factor NGA1-like [Cucumis sativus]) HSP 1 Score: 819.7 bits (2116), Expect = 2.1e-234 Identity = 384/384 (100.00%), Postives = 384/384 (100.00%), Query Frame = 1
BLAST of Cucsa.106780 vs. NCBI nr
Match: gi|700198178|gb|KGN53336.1| (hypothetical protein Csa_4G047970 [Cucumis sativus]) HSP 1 Score: 818.1 bits (2112), Expect = 6.3e-234 Identity = 383/383 (100.00%), Postives = 383/383 (100.00%), Query Frame = 1
BLAST of Cucsa.106780 vs. NCBI nr
Match: gi|659102258|ref|XP_008452034.1| (PREDICTED: B3 domain-containing transcription factor NGA2-like [Cucumis melo]) HSP 1 Score: 767.7 bits (1981), Expect = 9.7e-219 Identity = 368/387 (95.09%), Postives = 375/387 (96.90%), Query Frame = 1
BLAST of Cucsa.106780 vs. NCBI nr
Match: gi|950966419|ref|XP_014499090.1| (PREDICTED: B3 domain-containing transcription factor NGA1 [Vigna radiata var. radiata]) HSP 1 Score: 256.5 bits (654), Expect = 7.3e-65 Identity = 178/419 (42.48%), Postives = 217/419 (51.79%), Query Frame = 1
BLAST of Cucsa.106780 vs. NCBI nr
Match: gi|645278354|ref|XP_008244188.1| (PREDICTED: B3 domain-containing transcription factor NGA1-like [Prunus mume]) HSP 1 Score: 256.5 bits (654), Expect = 7.3e-65 Identity = 167/412 (40.53%), Postives = 212/412 (51.46%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |