CmoCh16G006470 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh16G006470
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
Descriptionauxin response factor 17
LocationCmo_Chr16 : 3189084 .. 3190016 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGAGTCTTCTAATTCTGGTGTTTATATAGAGAAAGAGCATATGTTCGACAAGGTTGTGACTCCAAGCGATGTGGGAAAATTGAATCGTTTAGTGATCCCTAAACAACATGCTGAAAAGTTCTTCCCTTTGGATTCTTCATCAACCGAAAAGGGTCTTCTTTTAAGCTTTGAAGATCGCTGTGGTAAGCTATGGCGGTTTCGTTACTCTTACTGGACTAGCAGCCAAAGCTATGTGATGACTAAAGGTTGGAGCCGCTTTGTTAAAGAGAAACGACTTGATGCTGGTGATATTGTCTCCTTTCAAAGAGGGGTTTGTAAAGATCGGTTTTTTATTGATTGGCGGCGCCGCCCTCCTCACACGGCGGTGGAGACAGCTTTTCATCACCATGGTGGTGGTGGTTGTGGCGGTGGTGGTGGTGGTTATGGTGGTGGTGGACAATTTCCGCCTTACCAATTTCAGCTTCACGGCCAGTGGAATCCAGTGGCCACACCCTTATCTTTACACAGGGACCACGCCTTCCACTTGCAGCAGAATAATAGTGTTCATAATAATGTCAGCCTATTTCATACCACCTATAATCATCAACCGATCGGAGGCGGTGGTTGTGACGGTGGGGCGTCGGTCTTTTACGAATTGAGATCCCCGGCAGCACTGCCGGGAGTCGACGACGGTGGCGGTCATGGAATTGGGAAAGCTGCTGCAGCTAAGACATTGAGGCTATTTGGTGTCAATATGGAATGTGTAGTATCTGAAGATTCCGATGACGACGAGGGCGACAAAGTAACAACCTCGACTTCGACAACGTTGTCATCTCAATTCTGTGTTTATAACGGAATGCCGATGTCGATGTCGATGCCGACGAGCAATCCCGACGTACCGATCACCGACTTTTTCGAAAAAGGGAAGTCGTTAGATTTTGGCACTTGA

mRNA sequence

ATGGAAGAGTCTTCTAATTCTGGTGTTTATATAGAGAAAGAGCATATGTTCGACAAGGTTGTGACTCCAAGCGATGTGGGAAAATTGAATCGTTTAGTGATCCCTAAACAACATGCTGAAAAGTTCTTCCCTTTGGATTCTTCATCAACCGAAAAGGGTCTTCTTTTAAGCTTTGAAGATCGCTGTGGTAAGCTATGGCGGTTTCGTTACTCTTACTGGACTAGCAGCCAAAGCTATGTGATGACTAAAGGTTGGAGCCGCTTTGTTAAAGAGAAACGACTTGATGCTGGTGATATTGTCTCCTTTCAAAGAGGGGTTTGTAAAGATCGGTTTTTTATTGATTGGCGGCGCCGCCCTCCTCACACGGCGGTGGAGACAGCTTTTCATCACCATGGTGGTGGTGGTTGTGGCGGTGGTGGTGGTGGTTATGGTGGTGGTGGACAATTTCCGCCTTACCAATTTCAGCTTCACGGCCAGTGGAATCCAGTGGCCACACCCTTATCTTTACACAGGGACCACGCCTTCCACTTGCAGCAGAATAATAGTGTTCATAATAATGTCAGCCTATTTCATACCACCTATAATCATCAACCGATCGGAGGCGGTGGTTGTGACGGTGGGGCGTCGGTCTTTTACGAATTGAGATCCCCGGCAGCACTGCCGGGAGTCGACGACGGTGGCGGTCATGGAATTGGGAAAGCTGCTGCAGCTAAGACATTGAGGCTATTTGGTGTCAATATGGAATGTGTAGTATCTGAAGATTCCGATGACGACGAGGGCGACAAAGTAACAACCTCGACTTCGACAACGTTGTCATCTCAATTCTGTGTTTATAACGGAATGCCGATGTCGATGTCGATGCCGACGAGCAATCCCGACGTACCGATCACCGACTTTTTCGAAAAAGGGAAGTCGTTAGATTTTGGCACTTGA

Coding sequence (CDS)

ATGGAAGAGTCTTCTAATTCTGGTGTTTATATAGAGAAAGAGCATATGTTCGACAAGGTTGTGACTCCAAGCGATGTGGGAAAATTGAATCGTTTAGTGATCCCTAAACAACATGCTGAAAAGTTCTTCCCTTTGGATTCTTCATCAACCGAAAAGGGTCTTCTTTTAAGCTTTGAAGATCGCTGTGGTAAGCTATGGCGGTTTCGTTACTCTTACTGGACTAGCAGCCAAAGCTATGTGATGACTAAAGGTTGGAGCCGCTTTGTTAAAGAGAAACGACTTGATGCTGGTGATATTGTCTCCTTTCAAAGAGGGGTTTGTAAAGATCGGTTTTTTATTGATTGGCGGCGCCGCCCTCCTCACACGGCGGTGGAGACAGCTTTTCATCACCATGGTGGTGGTGGTTGTGGCGGTGGTGGTGGTGGTTATGGTGGTGGTGGACAATTTCCGCCTTACCAATTTCAGCTTCACGGCCAGTGGAATCCAGTGGCCACACCCTTATCTTTACACAGGGACCACGCCTTCCACTTGCAGCAGAATAATAGTGTTCATAATAATGTCAGCCTATTTCATACCACCTATAATCATCAACCGATCGGAGGCGGTGGTTGTGACGGTGGGGCGTCGGTCTTTTACGAATTGAGATCCCCGGCAGCACTGCCGGGAGTCGACGACGGTGGCGGTCATGGAATTGGGAAAGCTGCTGCAGCTAAGACATTGAGGCTATTTGGTGTCAATATGGAATGTGTAGTATCTGAAGATTCCGATGACGACGAGGGCGACAAAGTAACAACCTCGACTTCGACAACGTTGTCATCTCAATTCTGTGTTTATAACGGAATGCCGATGTCGATGTCGATGCCGACGAGCAATCCCGACGTACCGATCACCGACTTTTTCGAAAAAGGGAAGTCGTTAGATTTTGGCACTTGA
Homology
[Close]
BLAST of CmoCh16G006470 vs. Swiss-Prot
Match: Y4814_ORYSJ (B3 domain-containing protein Os04g0581400 OS=Oryza sativa subsp. japonica GN=Os04g0581400 PE=3 SV=2)

HSP 1 Score: 196.8 bits (499), Expect = 3.4e-49
Identity = 102/139 (73.38%), Postives = 107/139 (76.98%), Query Frame = 1 

Query: 11  IEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKFFPLDSSSTEKGLLLSFEDRCGKLWRFRY 70
           IEKEHMFDKVVTPSDVGKLNRLVIPKQHAEK+FPLDS++ EKGLLLSFEDR GKLWRFRY
Sbjct: 104 IEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSAANEKGLLLSFEDRTGKLWRFRY 163

Query: 71  SYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGVC---KDRFFIDWRR----RPPHTA 130
           SYW SSQSYVMTKGWSRFVKEKRLDAGD VSF RG     +DR FIDW+R    R PH  
Sbjct: 164 SYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRGAAEATRDRLFIDWKRRADVRDPHRF 223

Query: 131 VETAFHHHGGGGCGGGGGG 143
                      G  GGG G
Sbjct: 224 QRLPLPMTSPYGPWGGGAG 242

[Close]
BLAST of CmoCh16G006470 vs. Swiss-Prot
Match: Y3209_ORYSJ (B3 domain-containing protein Os03g0120900 OS=Oryza sativa subsp. japonica GN=Os03g0120900 PE=2 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 3.4e-49
Identity = 107/171 (62.57%), Postives = 112/171 (65.50%), Query Frame = 1 

Query: 2   EESSNSGVYIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKFFPLDSSSTEKGLLLSFEDR 61
           E    S   +EKEHMFDKVVTPSDVGKLNRLVIPKQHAEK+FPLD++S EKGLLLSFEDR
Sbjct: 22  ESGGRSLAAVEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDAASNEKGLLLSFEDR 81

Query: 62  CGKLWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGV---CKDRFFIDWRRR 121
            GK WRFRYSYW SSQSYVMTKGWSRFVKEKRLDAGD VSF RGV    + R FIDWRRR
Sbjct: 82  TGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRGVGEAARGRLFIDWRRR 141

Query: 122 PP--------------HTAVETAF----HHHGGGGCGGGGGGYGGGGQFPP 152
           P               H      F    HHHG G         G     PP
Sbjct: 142 PDVVAALQPPTHRFAHHLPSSIPFAPWAHHHGHGAAAAAAAAAGARFLLPP 192

[Close]
BLAST of CmoCh16G006470 vs. Swiss-Prot
Match: NGA1_ARATH (B3 domain-containing transcription factor NGA1 OS=Arabidopsis thaliana GN=NGA1 PE=1 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 7.7e-49
Identity = 97/137 (70.80%), Postives = 105/137 (76.64%), Query Frame = 1 

Query: 1   MEESSNSGVYIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKFFPLDSSSTEKGLLLSFED 60
           + E   +    ++EHMFDKVVTPSDVGKLNRLVIPKQHAE+FFPLDSSS EKGLLL+FED
Sbjct: 19  LAEEEGAREVADREHMFDKVVTPSDVGKLNRLVIPKQHAERFFPLDSSSNEKGLLLNFED 78

Query: 61  RCGKLWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGV----CKDRFFIDWR 120
             GK WRFRYSYW SSQSYVMTKGWSRFVK+K+LDAGDIVSFQR V       R FIDWR
Sbjct: 79  LTGKSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRCVGDSGRDSRLFIDWR 138

Query: 121 RRP-----PHTAVETAF 129
           RRP     PH A    F
Sbjct: 139 RRPKVPDHPHFAAGAMF 155

[Close]
BLAST of CmoCh16G006470 vs. Swiss-Prot
Match: NGA3_ARATH (B3 domain-containing transcription factor NGA3 OS=Arabidopsis thaliana GN=NGA3 PE=2 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 2.9e-48
Identity = 132/320 (41.25%), Postives = 164/320 (51.25%), Query Frame = 1 

Query: 12  EKEHMFDKVVTPSDVGKLNRLVIPKQHAEKFFPLDSSSTEKGLLLSFEDRCGKLWRFRYS 71
           EKEHMFDKVVTPSDVGKLNRLVIPKQHAE++FPLDSS+ + G LL+F+DR GK+WRFRYS
Sbjct: 51  EKEHMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDSSNNQNGTLLNFQDRNGKMWRFRYS 110

Query: 72  YWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGVC----KDRFFIDWRRRPPHTAVETA 131
           YW SSQSYVMTKGWSRFVKEK+LDAGDIVSFQRG+     + + +IDWR RP  + V+  
Sbjct: 111 YWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGIGDESERSKLYIDWRHRPDMSLVQA- 170

Query: 132 FHHHGGGGCGGGGGGYGGGGQFPPYQFQLHGQWNPVATPLSLHRDHAFHLQQNNSVHNNV 191
            H  G  G                + F    Q++    PL  +     H   N  + N+ 
Sbjct: 171 -HQFGNFGFN--------------FNFPTTSQYSNRFHPLPEYNSVPIHRGLN--IGNHQ 230

Query: 192 SLFHTTYNHQPIG------GGGCDGGASVFYELRSPAALPGVDDGGGHGIGK-------- 251
             ++ T   + +G       G C    S         + P V D      G+        
Sbjct: 231 RSYYNTQRQEFVGYGYGNLAGRCYYTGSPLDHRNIVGSEPLVIDSVPVVPGRLTPVMLPP 290

Query: 252 -----AAAAKTLRLFGVNMECVVSEDSDDDEGDKVTTSTSTTLSSQFCVYNGMPMSMSMP 306
                + A K LRLFGVNMEC    D +  E   +        SS       + +S    
Sbjct: 291 LPPPPSTAGKRLRLFGVNMEC--GNDYNQQEESWLVPRGEIGASSSSSSALRLNLSTDHD 350

[Close]
BLAST of CmoCh16G006470 vs. Swiss-Prot
Match: NGA2_ARATH (B3 domain-containing transcription factor NGA2 OS=Arabidopsis thaliana GN=NGA2 PE=2 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 5.0e-48
Identity = 121/254 (47.64%), Postives = 149/254 (58.66%), Query Frame = 1 

Query: 1   MEESSNSGVYIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKFFPLDSSSTE---KGLLLS 60
           +EE+S+S   +E+EHMFDKVVTPSDVGKLNRLVIPKQHAE++FPLD+S+T    KGLLL+
Sbjct: 10  IEEASSS---MEREHMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDNSTTNDSNKGLLLN 69

Query: 61  FEDRCGKLWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGVC-KDRFFIDWR 120
           FEDR G  WRFRYSYW SSQSYVMTKGWSRFVK+K+LDAGDIVSFQR  C KD+ +IDWR
Sbjct: 70  FEDRSGNSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRDSCNKDKLYIDWR 129

Query: 121 RRPPHTAVETAFHHHGGGGCGGGGGGYGGGGQFPPYQFQLHGQWNPVATPLSLHRDHAFH 180
           RRP     +   HHH              G  FP +    H Q                 
Sbjct: 130 RRP-----KIPDHHH----------QQFAGAMFPRFYTFPHPQ----------------- 189

Query: 181 LQQNNSVHNNVSLFHTTYNHQPIGGGGCDGGASVFYELRSPAALPGVDDGGGHGIGKAA- 240
           +  N   HN   L+H  ++ + +G G         +      ++P +          A+ 
Sbjct: 190 MPTNYETHN---LYH-RFHQRDLGIGYYVRSMERSHPTAVIESVPVMMQRRAQVASMASR 224

Query: 241 AAKTLRLFGVNMEC 250
             K LRLFGV+MEC
Sbjct: 250 GEKRLRLFGVDMEC 224

[Close]
BLAST of CmoCh16G006470 vs. TrEMBL
Match: A0A0A0KZM6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G047970 PE=4 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 2.2e-103
Identity = 215/333 (64.56%), Postives = 236/333 (70.87%), Query Frame = 1 

Query: 4   SSNSGVYIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKFFPLDSSSTEKGLLLSFEDRCG 63
           ++N  +++EKEHMFDKVVTPSDVGKLNRLVIPKQHAEK+FPLDSSS EKGLLL+FEDRCG
Sbjct: 54  NNNCSIFVEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNEKGLLLNFEDRCG 113

Query: 64  KLWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGVCK--DRFFIDWRRRPPH 123
           KLWRFRYSYWTSSQSYVMTKGWSRFVK+KRLDAGDIVSFQR + +  DRFFIDWRRRPPH
Sbjct: 114 KLWRFRYSYWTSSQSYVMTKGWSRFVKDKRLDAGDIVSFQRPLHRNQDRFFIDWRRRPPH 173

Query: 124 TAVETAFHHHGGGGCGGGGGGYGGGGQFPP-----YQFQLHGQWN--PVATPLSLHRDHA 183
            AV+  FH H   G  G         QFPP     + FQLH QWN  PVATPLSL RDH 
Sbjct: 174 PAVDMPFHFHRHDGGTGAA-------QFPPPPPHHHHFQLHSQWNNNPVATPLSLQRDHV 233

Query: 184 FHLQQNNSVHNNVSLFHTTYNHQPIGG---GGCDGGASVFYELRSPAALPGVDD------ 243
            HL Q N   NNVSLFH TYNH         G  GGASVFY LRSP A P V+       
Sbjct: 234 LHLPQYN---NNVSLFHNTYNHHHHHNRYLDGSYGGASVFYHLRSPIAPPQVESVPVVAD 293

Query: 244 ------GGGHGIGKAAAAK-TLRLFGVNMECVVSEDSDDDEGDKVTTSTSTTLSSQFCVY 303
                 GGG GIG+ +AAK TLRLFGV+MEC VS    DDE D  TTS + + SSQF VY
Sbjct: 294 GNGGNGGGGSGIGRTSAAKTTLRLFGVDMECEVS----DDECDVATTSKAMSSSSQFHVY 353

Query: 304 NGM------PMSMSMPTSNPDVPITDFFEKGKS 306
           NGM      PM+M MPTSN ++   DFFEKGKS
Sbjct: 354 NGMPMPMLTPMTMQMPTSNNNISTMDFFEKGKS 372

[Close]
BLAST of CmoCh16G006470 vs. TrEMBL
Match: A0A061G9U8_THECC (AP2/B3-like transcriptional factor family protein, putative OS=Theobroma cacao GN=TCM_015590 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 1.8e-60
Identity = 161/341 (47.21%), Postives = 187/341 (54.84%), Query Frame = 1 

Query: 1   MEESSNSGVYIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKFFPLDSSSTEKGLLLSFED 60
           +E  S++   IEKEHMFDKVVTPSDVGKLNRLVIPKQHAEK+FPLDSS+ EKGLLL+FED
Sbjct: 145 LELKSSASANIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSTNEKGLLLNFED 204

Query: 61  RCGKLWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGV---CKDRFFIDWRR 120
           R GK WRFRYSYW SSQSYVMTKGWSRFVK+K+LDAGDIVSFQRGV    KDR FIDWRR
Sbjct: 205 RNGKPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRGVGEFGKDRLFIDWRR 264

Query: 121 RP--PHTAVETAFHHHGGGGCGGGGGGYGGGGQFPPYQFQLHGQWNP-VATPLSLHRDHA 180
           RP  P  A      HH                    + F     W+P +  P    RDH 
Sbjct: 265 RPDAPDPASFHPHQHH--------------------FSFHRSIPWSPLLMRPPPTGRDH- 324

Query: 181 FHLQQNNSVHNNVSLFHTTYNHQPIGGGGCD--GGA--SVFYELRSPAALPGVDDGGGHG 240
           FHL Q + ++ N     + Y   P G    +  GG    VFY  RS  A      G G G
Sbjct: 325 FHLSQIHPLNRN-----SYYGGYPTGSNVMNPAGGTMEPVFY-WRSAVAAAAPQMGMGMG 384

Query: 241 IGK------------------------AAAAKTLRLFGVNMECVVSEDSDDDEGDKVTTS 300
           +G                          AAAK LRLFGVNMEC  S  SD+ E    TT 
Sbjct: 385 LGMMEWQQQTGGVVEPIVFDSVPVVQGKAAAKRLRLFGVNMECPTSASSDECEMLSPTTI 444

Query: 301 TSTTLSS---QFCVYNGMPMSMSMPTSNPDVPITDFFEKGK 305
            + T++S   Q    +  P+ + +    P +P TDF    K
Sbjct: 445 ANATMASQPPQLSSSSQHPLQLRLYNGTP-LPPTDFLNANK 457

[Close]
BLAST of CmoCh16G006470 vs. TrEMBL
Match: A0A0D2Q216_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G261100 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 3.0e-60
Identity = 162/338 (47.93%), Postives = 189/338 (55.92%), Query Frame = 1 

Query: 1   MEESSNSGVYIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKFFPLDSSSTEKGLLLSFED 60
           +E  S++   IEKEHMFDKVVTPSDVGKLNRLVIPKQHAEK+FPLDSS+++KGLLL+FED
Sbjct: 97  LELRSSASGNIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSTSDKGLLLNFED 156

Query: 61  RCGKLWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGV---CKDRFFIDWRR 120
           R GK WRFRYSYW SSQSYVMTKGWSRFVK+K+LDAGDIVSFQRGV    KDR FIDWRR
Sbjct: 157 RNGKPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRGVGELGKDRLFIDWRR 216

Query: 121 RPPHTAVETAFHHHGGGGCGGGGGGYGGGGQFPPYQFQLHGQ--WNP-VATPLSLHRDHA 180
           RP     + +F HH                      F LH    WNP +  P    RDH 
Sbjct: 217 RPDAPDPQVSFLHH---------------------HFPLHRSIPWNPLLMRPPPTGRDH- 276

Query: 181 FHLQQNNSVHNNVSLFHTTYNHQPIGGGGCD----GG--ASVFYELRSPAALPGVDDGGG 240
            HL Q N +  N      TY      GGG +    GG   SVFY LRS         G G
Sbjct: 277 LHLSQINPLSRN------TYY-----GGGSNLVNPGGTMGSVFY-LRSAVVSTAPQMGMG 336

Query: 241 ------HG-------------IGKAAAAKTLRLFGVNMECVVSEDSDDDEGDKVTTSTST 300
                 HG             +   AAAK LRLFGVNM+C +SE  + D     T + +T
Sbjct: 337 MMEWQQHGGVVKPVAFDSVPVVQGQAAAKRLRLFGVNMDCPISESDEYDVISTTTIANAT 396

Query: 301 TLSSQ---FCVYNGMPMSMSMPTSNPDVPITDFFEKGK 305
             +SQ       +  P+ + +    P +P TDF    K
Sbjct: 397 MAASQTRPSSTSSQHPLQLRLYNGTP-LPPTDFLNPNK 399

[Close]
BLAST of CmoCh16G006470 vs. TrEMBL
Match: A0A0D2MKI1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G073600 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 1.8e-57
Identity = 155/330 (46.97%), Postives = 177/330 (53.64%), Query Frame = 1 

Query: 5   SNSGVYIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKFFPLDSSSTEKGLLLSFEDRCGK 64
           S S   IEKEH+FDKVVTPSDVGKLNRLVIPKQHAEK FPLDSS+ EKGLLL+FEDR GK
Sbjct: 89  SASAANIEKEHLFDKVVTPSDVGKLNRLVIPKQHAEKHFPLDSSTNEKGLLLNFEDRNGK 148

Query: 65  LWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGV---CKDRFFIDWRRRPPH 124
            WRFRYSYW SSQSYVMTKGWSRFVK+K+LDAGDIVSFQRGV    K R FIDWRRRP  
Sbjct: 149 PWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRGVGELGKHRLFIDWRRRPDG 208

Query: 125 TAVETAFHHHGGGGCGGGGGGYGGGGQFPPYQFQLHGQ---WNP-VATPLSLHRDHAFHL 184
                +FH H                    +   LH     W+P +  P    RD  F L
Sbjct: 209 PD-PVSFHPH-------------------THHLSLHRSNTPWSPLLMRPPPTARDR-FQL 268

Query: 185 QQNNSVHNNVSLFHTTYNHQPIGGGGCDGGASVFYELRSPAALPGVDDGG---------- 244
            Q N ++ N         +  +  GG  G    F    +P        GG          
Sbjct: 269 SQINPLNRNSYYGGFPTGNNVVNPGGTMGSVLFFRSAAAPTMEWQQQPGGVVEPIVFDSV 328

Query: 245 --GHGIGKAAAAKTLRLFGVNMECVVSEDSDDDEGDKVTTSTSTTLSS--QFCVYNGMPM 304
               G G AAAAK LRLFGVNMEC + E  + D     T   +T  S   Q    +  P+
Sbjct: 329 PVVQGTG-AAAAKRLRLFGVNMECPIPESHNPDMLSTTTIPNATMASQNPQLSSSSQHPL 388

Query: 305 SMSMPTSNPDVPITDFF--EKGK---SLDF 309
            + +    P +P  DF    KGK   SLDF
Sbjct: 389 QLRLYNGTPVLPPIDFLSANKGKASFSLDF 396

[Close]
BLAST of CmoCh16G006470 vs. TrEMBL
Match: U5GXP9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s45650g PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 1.6e-56
Identity = 161/360 (44.72%), Postives = 187/360 (51.94%), Query Frame = 1 

Query: 5   SNSGVYIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKFFPLDSSSTEKGLLLSFEDRCGK 64
           S+S   IEKEHMFDKVVTPSDVGKLNRLVIPKQHAEK+ PLDSSS EKGLLL+FED  GK
Sbjct: 98  SSSVQVIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYLPLDSSSNEKGLLLNFEDMNGK 157

Query: 65  LWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGV---CKDRFFIDWRRRPPH 124
            WRFRYSYW SSQSYVMTKGWSRFVKEK+LDAGDIVSFQRGV    KDR +I+WRRRP  
Sbjct: 158 AWRFRYSYWGSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGELGKDRLYINWRRRPDA 217

Query: 125 TAVETAFHHHGGGGCGGGGGGYGGGGQFPPYQFQLHGQWNPV----ATPLSLHRDHAFHL 184
               +   HH                 F  + F     W+P+     T   L RDH    
Sbjct: 218 PDDPSRHQHH-----------------FHNHHFSAI-PWSPLLMRPPTVPVLPRDHLHLS 277

Query: 185 QQNNSVHNNV--SLFHTTYNHQPIGGGGCDGGASVFYELRSPAALPGVDDG--------- 244
             N +    V  S +   Y +       C    SVFY   S  A   ++           
Sbjct: 278 NPNRNTCYKVGGSSYGYGYGNYSNVVNPCSSSGSVFYMTSSAGAGAALEPAPQQVGMGMV 337

Query: 245 ----GGHGI-------------GKAAAAKTLRLFGVNMECVVSEDSDDDEGDKV--TTST 304
               GG G+             GK AAAK LRLFGVNM+C ++ D  DD G K+  TT+ 
Sbjct: 338 QWQLGGGGVVEPVVYESVPVVQGK-AAAKRLRLFGVNMDCPIT-DQSDDYGHKLSSTTAA 397

Query: 305 STTLS----------------------SQFCVYNGMPMSMSMPTSNPDVPITDFFEKGKS 306
           +TTL                        Q  +Y G P++ +MP S      T F  KGKS
Sbjct: 398 ATTLPHNATIALQPTPQLSSQSLQHPLHQLRLYRGTPLA-AMPPST-----TQFLHKGKS 431

[Close]
BLAST of CmoCh16G006470 vs. TAIR10
Match: AT2G46870.1 (AT2G46870.1 AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 195.7 bits (496), Expect = 4.3e-50
Identity = 97/137 (70.80%), Postives = 105/137 (76.64%), Query Frame = 1 

Query: 1   MEESSNSGVYIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKFFPLDSSSTEKGLLLSFED 60
           + E   +    ++EHMFDKVVTPSDVGKLNRLVIPKQHAE+FFPLDSSS EKGLLL+FED
Sbjct: 19  LAEEEGAREVADREHMFDKVVTPSDVGKLNRLVIPKQHAERFFPLDSSSNEKGLLLNFED 78

Query: 61  RCGKLWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGV----CKDRFFIDWR 120
             GK WRFRYSYW SSQSYVMTKGWSRFVK+K+LDAGDIVSFQR V       R FIDWR
Sbjct: 79  LTGKSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRCVGDSGRDSRLFIDWR 138

Query: 121 RRP-----PHTAVETAF 129
           RRP     PH A    F
Sbjct: 139 RRPKVPDHPHFAAGAMF 155

[Close]
BLAST of CmoCh16G006470 vs. TAIR10
Match: AT1G01030.1 (AT1G01030.1 AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 193.7 bits (491), Expect = 1.6e-49
Identity = 132/320 (41.25%), Postives = 164/320 (51.25%), Query Frame = 1 

Query: 12  EKEHMFDKVVTPSDVGKLNRLVIPKQHAEKFFPLDSSSTEKGLLLSFEDRCGKLWRFRYS 71
           EKEHMFDKVVTPSDVGKLNRLVIPKQHAE++FPLDSS+ + G LL+F+DR GK+WRFRYS
Sbjct: 51  EKEHMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDSSNNQNGTLLNFQDRNGKMWRFRYS 110

Query: 72  YWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGVC----KDRFFIDWRRRPPHTAVETA 131
           YW SSQSYVMTKGWSRFVKEK+LDAGDIVSFQRG+     + + +IDWR RP  + V+  
Sbjct: 111 YWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGIGDESERSKLYIDWRHRPDMSLVQA- 170

Query: 132 FHHHGGGGCGGGGGGYGGGGQFPPYQFQLHGQWNPVATPLSLHRDHAFHLQQNNSVHNNV 191
            H  G  G                + F    Q++    PL  +     H   N  + N+ 
Sbjct: 171 -HQFGNFGFN--------------FNFPTTSQYSNRFHPLPEYNSVPIHRGLN--IGNHQ 230

Query: 192 SLFHTTYNHQPIG------GGGCDGGASVFYELRSPAALPGVDDGGGHGIGK-------- 251
             ++ T   + +G       G C    S         + P V D      G+        
Sbjct: 231 RSYYNTQRQEFVGYGYGNLAGRCYYTGSPLDHRNIVGSEPLVIDSVPVVPGRLTPVMLPP 290

Query: 252 -----AAAAKTLRLFGVNMECVVSEDSDDDEGDKVTTSTSTTLSSQFCVYNGMPMSMSMP 306
                + A K LRLFGVNMEC    D +  E   +        SS       + +S    
Sbjct: 291 LPPPPSTAGKRLRLFGVNMEC--GNDYNQQEESWLVPRGEIGASSSSSSALRLNLSTDHD 350

[Close]
BLAST of CmoCh16G006470 vs. TAIR10
Match: AT3G61970.1 (AT3G61970.1 AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 193.0 bits (489), Expect = 2.8e-49
Identity = 121/254 (47.64%), Postives = 149/254 (58.66%), Query Frame = 1 

Query: 1   MEESSNSGVYIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKFFPLDSSSTE---KGLLLS 60
           +EE+S+S   +E+EHMFDKVVTPSDVGKLNRLVIPKQHAE++FPLD+S+T    KGLLL+
Sbjct: 10  IEEASSS---MEREHMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDNSTTNDSNKGLLLN 69

Query: 61  FEDRCGKLWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGVC-KDRFFIDWR 120
           FEDR G  WRFRYSYW SSQSYVMTKGWSRFVK+K+LDAGDIVSFQR  C KD+ +IDWR
Sbjct: 70  FEDRSGNSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRDSCNKDKLYIDWR 129

Query: 121 RRPPHTAVETAFHHHGGGGCGGGGGGYGGGGQFPPYQFQLHGQWNPVATPLSLHRDHAFH 180
           RRP     +   HHH              G  FP +    H Q                 
Sbjct: 130 RRP-----KIPDHHH----------QQFAGAMFPRFYTFPHPQ----------------- 189

Query: 181 LQQNNSVHNNVSLFHTTYNHQPIGGGGCDGGASVFYELRSPAALPGVDDGGGHGIGKAA- 240
           +  N   HN   L+H  ++ + +G G         +      ++P +          A+ 
Sbjct: 190 MPTNYETHN---LYH-RFHQRDLGIGYYVRSMERSHPTAVIESVPVMMQRRAQVASMASR 224

Query: 241 AAKTLRLFGVNMEC 250
             K LRLFGV+MEC
Sbjct: 250 GEKRLRLFGVDMEC 224

[Close]
BLAST of CmoCh16G006470 vs. TAIR10
Match: AT2G36080.1 (AT2G36080.1 AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 164.5 bits (415), Expect = 1.1e-40
Identity = 80/133 (60.15%), Postives = 98/133 (73.68%), Query Frame = 1 

Query: 2   EESSNSGVYIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKFFPLDSSST---EKGLLLSF 61
           ++   + V  EKE +F+K +TPSDVGKLNRLVIPKQHAE++FPL +++    EKGLLL F
Sbjct: 23  QQQHQNDVVEEKEALFEKPLTPSDVGKLNRLVIPKQHAERYFPLAAAAADAVEKGLLLCF 82

Query: 62  EDRCGKLWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGVCK-DRFFIDWRR 121
           ED  GK WRFRYSYW SSQSYV+TKGWSR+VKEK LDAGD+V F R      RFFI WRR
Sbjct: 83  EDEEGKPWRFRYSYWNSSQSYVLTKGWSRYVKEKHLDAGDVVLFHRHRSDGGRFFIGWRR 142

Query: 122 RPPHTAVETAFHH 131
           R   ++   ++ H
Sbjct: 143 RGDSSSSSDSYRH 155

[Close]
BLAST of CmoCh16G006470 vs. TAIR10
Match: AT4G01500.1 (AT4G01500.1 AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 163.3 bits (412), Expect = 2.4e-40
Identity = 80/129 (62.02%), Postives = 92/129 (71.32%), Query Frame = 1 

Query: 13  KEHMFDKVVTPSDVGKLNRLVIPKQHAEKFFPLDSSSTEKGLLLSFEDRCGKLWRFRYSY 72
           +EHMFDKV+TPSDVGKLNRLVIPKQHAE FFPL+ +  + G +L F+D+ GK+WRFRYSY
Sbjct: 32  REHMFDKVLTPSDVGKLNRLVIPKQHAENFFPLEDN--QNGTVLDFQDKNGKMWRFRYSY 91

Query: 73  WTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGVCKDR----------FFIDWRRRPPHT 132
           W SSQSYVMTKGWSRFVKEK+L AGD VSF RG   D            FIDWR R    
Sbjct: 92  WNSSQSYVMTKGWSRFVKEKKLFAGDTVSFYRGYIPDDNAQPERRRKIMFIDWRPRAEIN 151

[Close]
BLAST of CmoCh16G006470 vs. NCBI nr
Match: gi|778690845|ref|XP_011653180.1| (PREDICTED: B3 domain-containing transcription factor NGA1-like [Cucumis sativus])

HSP 1 Score: 383.6 bits (984), Expect = 3.2e-103
Identity = 215/333 (64.56%), Postives = 236/333 (70.87%), Query Frame = 1 

Query: 4   SSNSGVYIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKFFPLDSSSTEKGLLLSFEDRCG 63
           ++N  +++EKEHMFDKVVTPSDVGKLNRLVIPKQHAEK+FPLDSSS EKGLLL+FEDRCG
Sbjct: 54  NNNCSIFVEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNEKGLLLNFEDRCG 113

Query: 64  KLWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGVCK--DRFFIDWRRRPPH 123
           KLWRFRYSYWTSSQSYVMTKGWSRFVK+KRLDAGDIVSFQR + +  DRFFIDWRRRPPH
Sbjct: 114 KLWRFRYSYWTSSQSYVMTKGWSRFVKDKRLDAGDIVSFQRPLHRNQDRFFIDWRRRPPH 173

Query: 124 TAVETAFHHHGGGGCGGGGGGYGGGGQFPP-----YQFQLHGQWN--PVATPLSLHRDHA 183
            AV+  FH H   G  G         QFPP     + FQLH QWN  PVATPLSL RDH 
Sbjct: 174 PAVDMPFHFHRHDGGTGAA-------QFPPPPPHHHHFQLHSQWNNNPVATPLSLQRDHV 233

Query: 184 FHLQQNNSVHNNVSLFHTTYNHQPIGG---GGCDGGASVFYELRSPAALPGVDD------ 243
            HL Q N   NNVSLFH TYNH         G  GGASVFY LRSP A P V+       
Sbjct: 234 LHLPQYN---NNVSLFHNTYNHHHHHNRYLDGSYGGASVFYHLRSPIAPPQVESVPVVAD 293

Query: 244 ------GGGHGIGKAAAAK-TLRLFGVNMECVVSEDSDDDEGDKVTTSTSTTLSSQFCVY 303
                 GGG GIG+ +AAK TLRLFGV+MEC VS    DDE D  TTS + + SSQF VY
Sbjct: 294 GNGGNGGGGSGIGRTSAAKTTLRLFGVDMECEVS----DDECDVATTSKAMSSSSQFHVY 353

Query: 304 NGM------PMSMSMPTSNPDVPITDFFEKGKS 306
           NGM      PM+M MPTSN ++   DFFEKGKS
Sbjct: 354 NGMPMPMLTPMTMQMPTSNNNISTMDFFEKGKS 372

[Close]
BLAST of CmoCh16G006470 vs. NCBI nr
Match: gi|700198178|gb|KGN53336.1| (hypothetical protein Csa_4G047970 [Cucumis sativus])

HSP 1 Score: 383.6 bits (984), Expect = 3.2e-103
Identity = 215/333 (64.56%), Postives = 236/333 (70.87%), Query Frame = 1 

Query: 4   SSNSGVYIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKFFPLDSSSTEKGLLLSFEDRCG 63
           ++N  +++EKEHMFDKVVTPSDVGKLNRLVIPKQHAEK+FPLDSSS EKGLLL+FEDRCG
Sbjct: 54  NNNCSIFVEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNEKGLLLNFEDRCG 113

Query: 64  KLWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGVCK--DRFFIDWRRRPPH 123
           KLWRFRYSYWTSSQSYVMTKGWSRFVK+KRLDAGDIVSFQR + +  DRFFIDWRRRPPH
Sbjct: 114 KLWRFRYSYWTSSQSYVMTKGWSRFVKDKRLDAGDIVSFQRPLHRNQDRFFIDWRRRPPH 173

Query: 124 TAVETAFHHHGGGGCGGGGGGYGGGGQFPP-----YQFQLHGQWN--PVATPLSLHRDHA 183
            AV+  FH H   G  G         QFPP     + FQLH QWN  PVATPLSL RDH 
Sbjct: 174 PAVDMPFHFHRHDGGTGAA-------QFPPPPPHHHHFQLHSQWNNNPVATPLSLQRDHV 233

Query: 184 FHLQQNNSVHNNVSLFHTTYNHQPIGG---GGCDGGASVFYELRSPAALPGVDD------ 243
            HL Q N   NNVSLFH TYNH         G  GGASVFY LRSP A P V+       
Sbjct: 234 LHLPQYN---NNVSLFHNTYNHHHHHNRYLDGSYGGASVFYHLRSPIAPPQVESVPVVAD 293

Query: 244 ------GGGHGIGKAAAAK-TLRLFGVNMECVVSEDSDDDEGDKVTTSTSTTLSSQFCVY 303
                 GGG GIG+ +AAK TLRLFGV+MEC VS    DDE D  TTS + + SSQF VY
Sbjct: 294 GNGGNGGGGSGIGRTSAAKTTLRLFGVDMECEVS----DDECDVATTSKAMSSSSQFHVY 353

Query: 304 NGM------PMSMSMPTSNPDVPITDFFEKGKS 306
           NGM      PM+M MPTSN ++   DFFEKGKS
Sbjct: 354 NGMPMPMLTPMTMQMPTSNNNISTMDFFEKGKS 372

[Close]
BLAST of CmoCh16G006470 vs. NCBI nr
Match: gi|659102258|ref|XP_008452034.1| (PREDICTED: B3 domain-containing transcription factor NGA2-like [Cucumis melo])

HSP 1 Score: 382.1 bits (980), Expect = 9.2e-103
Identity = 217/347 (62.54%), Postives = 239/347 (68.88%), Query Frame = 1 

Query: 4   SSNSGVYIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKFFPLDSSSTEKGLLLSFEDRCG 63
           ++N  +++EKEHMFDKVVTPSDVGKLNRLVIPKQHAEK+FPLDSSS EKGLLL+FEDRCG
Sbjct: 54  NNNCSIFVEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNEKGLLLNFEDRCG 113

Query: 64  KLWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGVCK--DRFFIDWRRRPPH 123
           KLWRFRYSYWTSSQSYVMTKGWSRFVK+KRLDAGDIVSFQR + +  DRFFIDWRRRPPH
Sbjct: 114 KLWRFRYSYWTSSQSYVMTKGWSRFVKDKRLDAGDIVSFQRPLHRNQDRFFIDWRRRPPH 173

Query: 124 TAVETAFHHHGGGGCGGGGGGYGGGGQFPP-----YQFQLHGQWN--PVATPLSLHRDHA 183
            AV+  FH H   G            QFPP     + FQLH QWN  PVATPLSL RDH 
Sbjct: 174 PAVDMPFHFHRHDGGTSAA-------QFPPPPPPHHHFQLHSQWNNNPVATPLSLQRDHV 233

Query: 184 FHLQQNNSVHNNVSLFHTTYNHQPIGGG----GCDGGASVFYELRSPAALPGVDD----- 243
            HL Q N   NNVSLFH TYNH          G  GGASVFY LRSP A P ++      
Sbjct: 234 LHLPQYN---NNVSLFHNTYNHHHHHHNRYLDGSYGGASVFYHLRSPIAPPQIESVPVVV 293

Query: 244 --------GGGHGIGKAAAAKT-LRLFGVNMECVVSEDSDDDEGDKVTTSTSTTLSSQFC 303
                   GGG GIG+ +AAKT LRLFGV+MEC VS    DDE D  TTS + T SSQF 
Sbjct: 294 DGNGGNGTGGGSGIGRTSAAKTTLRLFGVDMECEVS----DDECDVATTSKTMTSSSQFH 353

Query: 304 VYNGM------PMSMSMPTSNPDVPITDFFEKGK-------SLDFGT 311
           VYNGM      PM+M MPTSN ++   +FFEKGK       S DFGT
Sbjct: 354 VYNGMPMPMLTPMTMQMPTSNDNISTMEFFEKGKSSMSSMSSFDFGT 386

[Close]
BLAST of CmoCh16G006470 vs. NCBI nr
Match: gi|590674963|ref|XP_007039313.1| (AP2/B3-like transcriptional factor family protein, putative [Theobroma cacao])

HSP 1 Score: 241.1 bits (614), Expect = 2.5e-60
Identity = 161/341 (47.21%), Postives = 187/341 (54.84%), Query Frame = 1 

Query: 1   MEESSNSGVYIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKFFPLDSSSTEKGLLLSFED 60
           +E  S++   IEKEHMFDKVVTPSDVGKLNRLVIPKQHAEK+FPLDSS+ EKGLLL+FED
Sbjct: 145 LELKSSASANIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSTNEKGLLLNFED 204

Query: 61  RCGKLWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGV---CKDRFFIDWRR 120
           R GK WRFRYSYW SSQSYVMTKGWSRFVK+K+LDAGDIVSFQRGV    KDR FIDWRR
Sbjct: 205 RNGKPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRGVGEFGKDRLFIDWRR 264

Query: 121 RP--PHTAVETAFHHHGGGGCGGGGGGYGGGGQFPPYQFQLHGQWNP-VATPLSLHRDHA 180
           RP  P  A      HH                    + F     W+P +  P    RDH 
Sbjct: 265 RPDAPDPASFHPHQHH--------------------FSFHRSIPWSPLLMRPPPTGRDH- 324

Query: 181 FHLQQNNSVHNNVSLFHTTYNHQPIGGGGCD--GGA--SVFYELRSPAALPGVDDGGGHG 240
           FHL Q + ++ N     + Y   P G    +  GG    VFY  RS  A      G G G
Sbjct: 325 FHLSQIHPLNRN-----SYYGGYPTGSNVMNPAGGTMEPVFY-WRSAVAAAAPQMGMGMG 384

Query: 241 IGK------------------------AAAAKTLRLFGVNMECVVSEDSDDDEGDKVTTS 300
           +G                          AAAK LRLFGVNMEC  S  SD+ E    TT 
Sbjct: 385 LGMMEWQQQTGGVVEPIVFDSVPVVQGKAAAKRLRLFGVNMECPTSASSDECEMLSPTTI 444

Query: 301 TSTTLSS---QFCVYNGMPMSMSMPTSNPDVPITDFFEKGK 305
            + T++S   Q    +  P+ + +    P +P TDF    K
Sbjct: 445 ANATMASQPPQLSSSSQHPLQLRLYNGTP-LPPTDFLNANK 457

[Close]
BLAST of CmoCh16G006470 vs. NCBI nr
Match: gi|823214246|ref|XP_012439872.1| (PREDICTED: B3 domain-containing transcription factor NGA1-like [Gossypium raimondii])

HSP 1 Score: 240.4 bits (612), Expect = 4.3e-60
Identity = 162/338 (47.93%), Postives = 189/338 (55.92%), Query Frame = 1 

Query: 1   MEESSNSGVYIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKFFPLDSSSTEKGLLLSFED 60
           +E  S++   IEKEHMFDKVVTPSDVGKLNRLVIPKQHAEK+FPLDSS+++KGLLL+FED
Sbjct: 97  LELRSSASGNIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSTSDKGLLLNFED 156

Query: 61  RCGKLWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGV---CKDRFFIDWRR 120
           R GK WRFRYSYW SSQSYVMTKGWSRFVK+K+LDAGDIVSFQRGV    KDR FIDWRR
Sbjct: 157 RNGKPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRGVGELGKDRLFIDWRR 216

Query: 121 RPPHTAVETAFHHHGGGGCGGGGGGYGGGGQFPPYQFQLHGQ--WNP-VATPLSLHRDHA 180
           RP     + +F HH                      F LH    WNP +  P    RDH 
Sbjct: 217 RPDAPDPQVSFLHH---------------------HFPLHRSIPWNPLLMRPPPTGRDH- 276

Query: 181 FHLQQNNSVHNNVSLFHTTYNHQPIGGGGCD----GG--ASVFYELRSPAALPGVDDGGG 240
            HL Q N +  N      TY      GGG +    GG   SVFY LRS         G G
Sbjct: 277 LHLSQINPLSRN------TYY-----GGGSNLVNPGGTMGSVFY-LRSAVVSTAPQMGMG 336

Query: 241 ------HG-------------IGKAAAAKTLRLFGVNMECVVSEDSDDDEGDKVTTSTST 300
                 HG             +   AAAK LRLFGVNM+C +SE  + D     T + +T
Sbjct: 337 MMEWQQHGGVVKPVAFDSVPVVQGQAAAKRLRLFGVNMDCPISESDEYDVISTTTIANAT 396

Query: 301 TLSSQ---FCVYNGMPMSMSMPTSNPDVPITDFFEKGK 305
             +SQ       +  P+ + +    P +P TDF    K
Sbjct: 397 MAASQTRPSSTSSQHPLQLRLYNGTP-LPPTDFLNPNK 399

The following BLAST results are available for this feature:
BLAST of CmoCh16G006470 vs. Swiss-Prot
Match NameE-valueIdentityDescription
Y4814_ORYSJ3.4e-4973.38B3 domain-containing protein Os04g0581400 OS=Oryza sativa subsp. japonica GN=Os0... [more]
Y3209_ORYSJ3.4e-4962.57B3 domain-containing protein Os03g0120900 OS=Oryza sativa subsp. japonica GN=Os0... [more]
NGA1_ARATH7.7e-4970.80B3 domain-containing transcription factor NGA1 OS=Arabidopsis thaliana GN=NGA1 P... [more]
NGA3_ARATH2.9e-4841.25B3 domain-containing transcription factor NGA3 OS=Arabidopsis thaliana GN=NGA3 P... [more]
NGA2_ARATH5.0e-4847.64B3 domain-containing transcription factor NGA2 OS=Arabidopsis thaliana GN=NGA2 P... [more]
BLAST of CmoCh16G006470 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KZM6_CUCSA2.2e-10364.56Uncharacterized protein OS=Cucumis sativus GN=Csa_4G047970 PE=4 SV=1[more]
A0A061G9U8_THECC1.8e-6047.21AP2/B3-like transcriptional factor family protein, putative OS=Theobroma cacao G... [more]
A0A0D2Q216_GOSRA3.0e-6047.93Uncharacterized protein OS=Gossypium raimondii GN=B456_008G261100 PE=4 SV=1[more]
A0A0D2MKI1_GOSRA1.8e-5746.97Uncharacterized protein OS=Gossypium raimondii GN=B456_003G073600 PE=4 SV=1[more]
U5GXP9_POPTR1.6e-5644.72Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s45650g PE=4 SV=1[more]
BLAST of CmoCh16G006470 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G46870.14.3e-5070.80 AP2/B3-like transcriptional factor family protein[more]
AT1G01030.11.6e-4941.25 AP2/B3-like transcriptional factor family protein[more]
AT3G61970.12.8e-4947.64 AP2/B3-like transcriptional factor family protein[more]
AT2G36080.11.1e-4060.15 AP2/B3-like transcriptional factor family protein[more]
AT4G01500.12.4e-4062.02 AP2/B3-like transcriptional factor family protein[more]
BLAST of CmoCh16G006470 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778690845|ref|XP_011653180.1|3.2e-10364.56PREDICTED: B3 domain-containing transcription factor NGA1-like [Cucumis sativus][more]
gi|700198178|gb|KGN53336.1|3.2e-10364.56hypothetical protein Csa_4G047970 [Cucumis sativus][more]
gi|659102258|ref|XP_008452034.1|9.2e-10362.54PREDICTED: B3 domain-containing transcription factor NGA2-like [Cucumis melo][more]
gi|590674963|ref|XP_007039313.1|2.5e-6047.21AP2/B3-like transcriptional factor family protein, putative [Theobroma cacao][more]
gi|823214246|ref|XP_012439872.1|4.3e-6047.93PREDICTED: B3 domain-containing transcription factor NGA1-like [Gossypium raimon... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003340B3_DNA-bd
IPR015300DNA-bd_pseudobarrel_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0008150 biological_process
cellular_component GO:0005634 nucleus
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh16G006470.1CmoCh16G006470.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003340B3 DNA binding domainPFAMPF02362B3coord: 17..118
score: 4.5
IPR003340B3 DNA binding domainSMARTSM01019B3_2coord: 17..119
score: 2.7
IPR003340B3 DNA binding domainPROFILEPS50863B3coord: 17..119
score: 14
IPR015300DNA-binding pseudobarrel domainGENE3DG3DSA:2.40.330.10coord: 11..119
score: 9.0
IPR015300DNA-binding pseudobarrel domainunknownSSF101936DNA-binding pseudobarrel domaincoord: 14..110
score: 1.14
NoneNo IPR availablePANTHERPTHR31140FAMILY NOT NAMEDcoord: 2..274
score: 2.8
NoneNo IPR availablePANTHERPTHR31140:SF4B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR NGA1-RELATEDcoord: 2..274
score: 2.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh16G006470Cucsa.106780Cucumber (Gy14) v1cgycmoB0244
CmoCh16G006470CmaCh16G005970Cucurbita maxima (Rimu)cmacmoB322
CmoCh16G006470CmaCh04G007390Cucurbita maxima (Rimu)cmacmoB700
CmoCh16G006470Cla014628Watermelon (97103) v1cmowmB301
CmoCh16G006470Csa4G047970Cucumber (Chinese Long) v2cmocuB325
CmoCh16G006470MELO3C016356Melon (DHL92) v3.5.1cmomeB294
CmoCh16G006470ClCG07G008140Watermelon (Charleston Gray)cmowcgB294
CmoCh16G006470CSPI04G05760Wild cucumber (PI 183967)cmocpiB332
CmoCh16G006470Lsi07G002780Bottle gourd (USVL1VR-Ls)cmolsiB315
CmoCh16G006470Cp4.1LG14g02110Cucurbita pepo (Zucchini)cmocpeB307
CmoCh16G006470MELO3C016356.2Melon (DHL92) v3.6.1cmomedB336
CmoCh16G006470CsaV3_4G005920Cucumber (Chinese Long) v3cmocucB0388
CmoCh16G006470CsaV3_5G001410Cucumber (Chinese Long) v3cmocucB0403
CmoCh16G006470Cla97C07G135270Watermelon (97103) v2cmowmbB336
CmoCh16G006470Bhi01G001809Wax gourdcmowgoB0428
CmoCh16G006470CsGy4G005630Cucumber (Gy14) v2cgybcmoB467
CmoCh16G006470Carg14136Silver-seed gourdcarcmoB1258
CmoCh16G006470Carg22199Silver-seed gourdcarcmoB0803
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh16G006470CmoCh04G007860Cucurbita moschata (Rifu)cmocmoB285
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh16G006470Cucumber (Gy14) v1cgycmoB0825
CmoCh16G006470Cucurbita maxima (Rimu)cmacmoB290
CmoCh16G006470Wild cucumber (PI 183967)cmocpiB338
CmoCh16G006470Cucumber (Chinese Long) v2cmocuB330
CmoCh16G006470Melon (DHL92) v3.5.1cmomeB277
CmoCh16G006470Watermelon (Charleston Gray)cmowcgB284
CmoCh16G006470Watermelon (97103) v1cmowmB313
CmoCh16G006470Cucurbita pepo (Zucchini)cmocpeB313
CmoCh16G006470Cucurbita pepo (Zucchini)cmocpeB316
CmoCh16G006470Bottle gourd (USVL1VR-Ls)cmolsiB288
CmoCh16G006470Bottle gourd (USVL1VR-Ls)cmolsiB310
CmoCh16G006470Cucumber (Gy14) v2cgybcmoB309
CmoCh16G006470Cucumber (Gy14) v2cgybcmoB596
CmoCh16G006470Melon (DHL92) v3.6.1cmomedB314
CmoCh16G006470Cucumber (Chinese Long) v3cmocucB0400
CmoCh16G006470Watermelon (97103) v2cmowmbB311
CmoCh16G006470Watermelon (97103) v2cmowmbB330
CmoCh16G006470Cucurbita moschata (Rifu)cmocmoB238