CmoCh04G007860 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh04G007860
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
Descriptionauxin response factor 17
LocationCmo_Chr04 : 3937439 .. 3938464 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTTGGGTTCGTGTTCTAGATTTCCGCTTGATTCAAGCACAGATTTTGAAAAGGAGCAGCAGCAACAGCAAGAAATGGAATCCAGCTCCCTTTTTGTTGAGAAAGAGCACATGTTCGACAAAGTTGTGACTCCAAGCGATGTGGGAAAATTAAACCGGTTGGTCATCCCAAAGCAACACGCTGAAAAGTACTTCCCGCTTGATTCTTCATCCAACGACAAGGGTCTTCTCTTGAACTTCGAAGACCGCTGTGGAAAATCGTGGCGGTTCCGTTACTCTTACTGGACCAGCAGCCAGAGCTACGTCATGACTAAAGGCTGGAGCCGCTTTGTTAAAGAGAAGCGCCTCGATGCTGGTGATATCGTCTCCTTTCAACGAGGCCTTGGTCATCTTGGTAAAGATCGGTTTTTTATTGATTGGCGCCGCCGCCCACCTCATGCCCCGCTTGACACACCTATTACTTTTCACCACAACCACCACCTCCACGGCGGTGGAGCCGCCGGCGTTGCCCAAATTCCTCACCATTTTCACCTTCACCAGTGGACTCCAGTTGCCACACCCTTATCTTTACCCAGGGACCACCTCCTCCACTTGCCGCAGAATAATAGTAATCATAATAATCTTACCCTATTTCATAATGATAATTTTAATCTCTATAATCATCATTATCATCATCATTATCTTAACCCTCCTCCCATCCAAGACGGCGGTGGTTCGCCATCGGTTTTGTACCATTTAAGATCTGCGCCGCCACCGCCACCCGTGGCGGTGGGCGGTGGTGGCCGTGGAATTGGGAAAGGTGCTGCTTCTTCTAAGACATTGAGACTTTTTGGTGTCAACATGGAATGTGCAGTGTCTGAAGATCAATCTGATGATGAATGTGACATAACAACCTCGACTACGACAATGTCGCCTCAATTCCGCGTTTACGATGGAATGCCGATGTCGATACCGATACGGATGCCGAACAGTAACAACAAGCTGACGACCGACTTTTTCAATAAAGGGAAGTCGTCAAATTGA

mRNA sequence

ATGGATTTGGGTTCGTGTTCTAGATTTCCGCTTGATTCAAGCACAGATTTTGAAAAGGAGCAGCAGCAACAGCAAGAAATGGAATCCAGCTCCCTTTTTGTTGAGAAAGAGCACATGTTCGACAAAGTTGTGACTCCAAGCGATGTGGGAAAATTAAACCGGTTGGTCATCCCAAAGCAACACGCTGAAAAGTACTTCCCGCTTGATTCTTCATCCAACGACAAGGGTCTTCTCTTGAACTTCGAAGACCGCTGTGGAAAATCGTGGCGGTTCCGTTACTCTTACTGGACCAGCAGCCAGAGCTACGTCATGACTAAAGGCTGGAGCCGCTTTGTTAAAGAGAAGCGCCTCGATGCTGGTGATATCGTCTCCTTTCAACGAGGCCTTGGTCATCTTGGTAAAGATCGGTTTTTTATTGATTGGCGCCGCCGCCCACCTCATGCCCCGCTTGACACACCTATTACTTTTCACCACAACCACCACCTCCACGGCGGTGGAGCCGCCGGCGTTGCCCAAATTCCTCACCATTTTCACCTTCACCAGTGGACTCCAGTTGCCACACCCTTATCTTTACCCAGGGACCACCTCCTCCACTTGCCGCAGAATAATAGTAATCATAATAATCTTACCCTATTTCATAATGATAATTTTAATCTCTATAATCATCATTATCATCATCATTATCTTAACCCTCCTCCCATCCAAGACGGCGGTGGTTCGCCATCGGTTTTGTACCATTTAAGATCTGCGCCGCCACCGCCACCCGTGGCGGTGGGCGGTGGTGGCCGTGGAATTGGGAAAGGTGCTGCTTCTTCTAAGACATTGAGACTTTTTGGTGTCAACATGGAATGTGCAGTGTCTGAAGATCAATCTGATGATGAATGTGACATAACAACCTCGACTACGACAATGTCGCCTCAATTCCGCGTTTACGATGGAATGCCGATGTCGATACCGATACGGATGCCGAACAGTAACAACAAGCTGACGACCGACTTTTTCAATAAAGGGAAGTCGTCAAATTGA

Coding sequence (CDS)

ATGGATTTGGGTTCGTGTTCTAGATTTCCGCTTGATTCAAGCACAGATTTTGAAAAGGAGCAGCAGCAACAGCAAGAAATGGAATCCAGCTCCCTTTTTGTTGAGAAAGAGCACATGTTCGACAAAGTTGTGACTCCAAGCGATGTGGGAAAATTAAACCGGTTGGTCATCCCAAAGCAACACGCTGAAAAGTACTTCCCGCTTGATTCTTCATCCAACGACAAGGGTCTTCTCTTGAACTTCGAAGACCGCTGTGGAAAATCGTGGCGGTTCCGTTACTCTTACTGGACCAGCAGCCAGAGCTACGTCATGACTAAAGGCTGGAGCCGCTTTGTTAAAGAGAAGCGCCTCGATGCTGGTGATATCGTCTCCTTTCAACGAGGCCTTGGTCATCTTGGTAAAGATCGGTTTTTTATTGATTGGCGCCGCCGCCCACCTCATGCCCCGCTTGACACACCTATTACTTTTCACCACAACCACCACCTCCACGGCGGTGGAGCCGCCGGCGTTGCCCAAATTCCTCACCATTTTCACCTTCACCAGTGGACTCCAGTTGCCACACCCTTATCTTTACCCAGGGACCACCTCCTCCACTTGCCGCAGAATAATAGTAATCATAATAATCTTACCCTATTTCATAATGATAATTTTAATCTCTATAATCATCATTATCATCATCATTATCTTAACCCTCCTCCCATCCAAGACGGCGGTGGTTCGCCATCGGTTTTGTACCATTTAAGATCTGCGCCGCCACCGCCACCCGTGGCGGTGGGCGGTGGTGGCCGTGGAATTGGGAAAGGTGCTGCTTCTTCTAAGACATTGAGACTTTTTGGTGTCAACATGGAATGTGCAGTGTCTGAAGATCAATCTGATGATGAATGTGACATAACAACCTCGACTACGACAATGTCGCCTCAATTCCGCGTTTACGATGGAATGCCGATGTCGATACCGATACGGATGCCGAACAGTAACAACAAGCTGACGACCGACTTTTTCAATAAAGGGAAGTCGTCAAATTGA
Homology
[Close]
BLAST of CmoCh04G007860 vs. Swiss-Prot
Match: Y3209_ORYSJ (B3 domain-containing protein Os03g0120900 OS=Oryza sativa subsp. japonica GN=Os03g0120900 PE=2 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 1.1e-56
Identity = 137/278 (49.28%), Postives = 156/278 (56.12%), Query Frame = 1 

Query: 34  VEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNDKGLLLNFEDRCGKSWRFRY 93
           VEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLD++SN+KGLLL+FEDR GK WRFRY
Sbjct: 31  VEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDAASNEKGLLLSFEDRTGKPWRFRY 90

Query: 94  SYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGLGHLGKDRFFIDWRRRPP------- 153
           SYW SSQSYVMTKGWSRFVKEKRLDAGD VSF RG+G   + R FIDWRRRP        
Sbjct: 91  SYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRGVGEAARGRLFIDWRRRPDVVAALQP 150

Query: 154 -------HAPLDTPITFHHNHHLHGGGAAGVAQIPHHFHLHQWTPVATPLSLPRDHLLHL 213
                  H P   P     +HH HG  AA  A     F L    P +TP           
Sbjct: 151 PTHRFAHHLPSSIPFAPWAHHHGHGAAAAAAAAAGARFLL---PPSSTP----------- 210

Query: 214 PQNNSNHNNLTLFHNDNFNLYNHHYHHHYLNPPPIQDGGGSPSVLYHLRSAPPP----PP 273
                              +Y+HH  H +           S  VL++ R  PP     P 
Sbjct: 211 -------------------IYDHHRRHAHAVGYDAYAAATSRQVLFY-RPLPPQQQHHPA 270

Query: 274 VAVGGGGRGIGKG-----AASSKTLRLFGVNMECAVSE 289
           V +      +  G     +A SK +RLFGVN++CA SE
Sbjct: 271 VVLESVPVRMTAGHAEPPSAPSKRVRLFGVNLDCANSE 274

[Close]
BLAST of CmoCh04G007860 vs. Swiss-Prot
Match: NGA1_ARATH (B3 domain-containing transcription factor NGA1 OS=Arabidopsis thaliana GN=NGA1 PE=1 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 1.3e-52
Identity = 113/180 (62.78%), Postives = 127/180 (70.56%), Query Frame = 1 

Query: 18  EKEQQQQQEMESSSLFVEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNDKGL 77
           E+E +   E E +    ++EHMFDKVVTPSDVGKLNRLVIPKQHAE++FPLDSSSN+KGL
Sbjct: 13  EEEAKPLAEEEGAREVADREHMFDKVVTPSDVGKLNRLVIPKQHAERFFPLDSSSNEKGL 72

Query: 78  LLNFEDRCGKSWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGLGHLGKD-R 137
           LLNFED  GKSWRFRYSYW SSQSYVMTKGWSRFVK+K+LDAGDIVSFQR +G  G+D R
Sbjct: 73  LLNFEDLTGKSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRCVGDSGRDSR 132

Query: 138 FFIDWRRRP-----PHAPLDT--------PITFH--HNH----HLHGGGAAGVAQIPHHF 178
            FIDWRRRP     PH             P T +  +NH    H H GG     QIP  F
Sbjct: 133 LFIDWRRRPKVPDHPHFAAGAMFPRFYSFPSTNYSLYNHQQQRHHHSGGGYNYHQIPREF 192

[Close]
BLAST of CmoCh04G007860 vs. Swiss-Prot
Match: Y2835_ORYSJ (B3 domain-containing protein Os02g0683500 OS=Oryza sativa subsp. japonica GN=Os02g0683500 PE=2 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 8.1e-52
Identity = 103/149 (69.13%), Postives = 113/149 (75.84%), Query Frame = 1 

Query: 34  VEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNDKGLLLNFEDRCGKSWRFRY 93
           VEKEHMFDKVVTPSDVGKLNRLVIPKQ+AEKYFPLD+++N+KGLLLNFEDR GK WRFRY
Sbjct: 90  VEKEHMFDKVVTPSDVGKLNRLVIPKQYAEKYFPLDAAANEKGLLLNFEDRAGKPWRFRY 149

Query: 94  SYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGLG-HLGKDRFFIDWRRR-------- 153
           SYW SSQSYVMTKGWSRFVKEKRLDAGD VSF RG+G    + R FIDW+RR        
Sbjct: 150 SYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFSRGIGDEAARHRLFIDWKRRADTRDPLR 209

Query: 154 -PPHAPLDTPITFHHNHHLHGGGAAGVAQ 173
            P   PL  P+T H+     GGG     Q
Sbjct: 210 LPRGLPLPMPLTSHYAPWGIGGGGGFFVQ 238

[Close]
BLAST of CmoCh04G007860 vs. Swiss-Prot
Match: Y4814_ORYSJ (B3 domain-containing protein Os04g0581400 OS=Oryza sativa subsp. japonica GN=Os04g0581400 PE=3 SV=2)

HSP 1 Score: 203.8 bits (517), Expect = 3.1e-51
Identity = 100/138 (72.46%), Postives = 109/138 (78.99%), Query Frame = 1 

Query: 34  VEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNDKGLLLNFEDRCGKSWRFRY 93
           +EKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDS++N+KGLLL+FEDR GK WRFRY
Sbjct: 104 IEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSAANEKGLLLSFEDRTGKLWRFRY 163

Query: 94  SYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGLGHLGKDRFFIDWRR----RPPHAP 153
           SYW SSQSYVMTKGWSRFVKEKRLDAGD VSF RG     +DR FIDW+R    R PH  
Sbjct: 164 SYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRGAAEATRDRLFIDWKRRADVRDPHRF 223

Query: 154 LDTPITFHHNHHLHGGGA 168
              P+     +   GGGA
Sbjct: 224 QRLPLPMTSPYGPWGGGA 241

[Close]
BLAST of CmoCh04G007860 vs. Swiss-Prot
Match: NGA3_ARATH (B3 domain-containing transcription factor NGA3 OS=Arabidopsis thaliana GN=NGA3 PE=2 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 3.2e-48
Identity = 126/275 (45.82%), Postives = 151/275 (54.91%), Query Frame = 1 

Query: 35  EKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNDKGLLLNFEDRCGKSWRFRYS 94
           EKEHMFDKVVTPSDVGKLNRLVIPKQHAE+YFPLDSS+N  G LLNF+DR GK WRFRYS
Sbjct: 51  EKEHMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDSSNNQNGTLLNFQDRNGKMWRFRYS 110

Query: 95  YWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGLG-HLGKDRFFIDWRRRPPHAPLDTP 154
           YW SSQSYVMTKGWSRFVKEK+LDAGDIVSFQRG+G    + + +IDWR RP     D  
Sbjct: 111 YWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGIGDESERSKLYIDWRHRP-----DMS 170

Query: 155 ITFHHNHHLHG--GGAAGVAQIPHHFHLHQWTPVATPLSLPRDHLLHLPQNNSNHNNLTL 214
           +   H     G        +Q  + FH     P+    S+P    L++  +  ++ N   
Sbjct: 171 LVQAHQFGNFGFNFNFPTTSQYSNRFH-----PLPEYNSVPIHRGLNIGNHQRSYYNTQR 230

Query: 215 FHNDNFNLYNHHYHHHYLNPPPIQDG--GGSPSVLYHLRSAP-----------PPPPVAV 274
                +   N     +Y   P       G  P V+  +   P           PPPP   
Sbjct: 231 QEFVGYGYGNLAGRCYYTGSPLDHRNIVGSEPLVIDSVPVVPGRLTPVMLPPLPPPPSTA 290

Query: 275 GGGGRGIGKGAASSKTLRLFGVNMECAVSEDQSDD 294
           G             K LRLFGVNMEC    +Q ++
Sbjct: 291 G-------------KRLRLFGVNMECGNDYNQQEE 302

[Close]
BLAST of CmoCh04G007860 vs. TrEMBL
Match: A0A0A0KZM6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G047970 PE=4 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 1.9e-103
Identity = 228/368 (61.96%), Postives = 254/368 (69.02%), Query Frame = 1 

Query: 12  DSSTDFEKEQQQQQEMESS----------SLFVEKEHMFDKVVTPSDVGKLNRLVIPKQH 71
           D     +++QQQ QEME            S+FVEKEHMFDKVVTPSDVGKLNRLVIPKQH
Sbjct: 29  DDEQQQQQQQQQDQEMEEESCNNSNNNNCSIFVEKEHMFDKVVTPSDVGKLNRLVIPKQH 88

Query: 72  AEKYFPLDSSSNDKGLLLNFEDRCGKSWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGD 131
           AEKYFPLDSSSN+KGLLLNFEDRCGK WRFRYSYWTSSQSYVMTKGWSRFVK+KRLDAGD
Sbjct: 89  AEKYFPLDSSSNEKGLLLNFEDRCGKLWRFRYSYWTSSQSYVMTKGWSRFVKDKRLDAGD 148

Query: 132 IVSFQRGLGHLGKDRFFIDWRRRPPHAPLDTPITFHHNHHLHGGGAAGVAQIP------H 191
           IVSFQR L H  +DRFFIDWRRRPPH  +D P  FH     H GG  G AQ P      H
Sbjct: 149 IVSFQRPL-HRNQDRFFIDWRRRPPHPAVDMPFHFHR----HDGG-TGAAQFPPPPPHHH 208

Query: 192 HFHLH-QW--TPVATPLSLPRDHLLHLPQNNSNHNNLTLFHNDNFNLYNHHYHHH-YLNP 251
           HF LH QW   PVATPLSL RDH+LHLPQ N   NN++LFH    N YNHH+HH+ YL  
Sbjct: 209 HFQLHSQWNNNPVATPLSLQRDHVLHLPQYN---NNVSLFH----NTYNHHHHHNRYL-- 268

Query: 252 PPIQDGG-GSPSVLYHLRSAPPPPPV-----------AVGGGGRGIGKGAASSKTLRLFG 311
               DG  G  SV YHLRS   PP V             GGGG GIG+ +A+  TLRLFG
Sbjct: 269 ----DGSYGGASVFYHLRSPIAPPQVESVPVVADGNGGNGGGGSGIGRTSAAKTTLRLFG 328

Query: 312 VNMECAVSEDQSDDECDITTSTTTM--SPQFRVYDGMPM----SIPIRMPNSNNKLTT-D 341
           V+MEC V    SDDECD+ T++  M  S QF VY+GMPM     + ++MP SNN ++T D
Sbjct: 329 VDMECEV----SDDECDVATTSKAMSSSSQFHVYNGMPMPMLTPMTMQMPTSNNNISTMD 373

[Close]
BLAST of CmoCh04G007860 vs. TrEMBL
Match: W9S0I8_9ROSA (B3 domain-containing transcription factor NGA1 OS=Morus notabilis GN=L484_024101 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.0e-64
Identity = 173/377 (45.89%), Postives = 203/377 (53.85%), Query Frame = 1 

Query: 34  VEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNDKGLLLNFEDRCGKSWRFRY 93
           +E+EHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSS+N+KGLLLNFEDR GK WRFRY
Sbjct: 85  IEREHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSTNEKGLLLNFEDRNGKPWRFRY 144

Query: 94  SYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGLGHLGKDRFFIDWRRRPPHAPLDTP 153
           SYW SSQSYVMTKGWSRFVKEK+LDAGD+VSFQRG+G LGKDR FIDWRRRP     D P
Sbjct: 145 SYWNSSQSYVMTKGWSRFVKEKKLDAGDVVSFQRGVGELGKDRLFIDWRRRP-----DAP 204

Query: 154 ITFHHN--------HHLHGGGAAGVAQIPHHFHLHQWTPVATPLSLPRD-------HLLH 213
              HH+        HHL    A     +P    L +  P   P   PRD         L 
Sbjct: 205 ENHHHHLGGMASLHHHLPAAAAFSFPSVPWSHSLMRPPP---PFQSPRDVSSGGGAGQLQ 264

Query: 214 LPQNNSNHNNLTLFHNDNFNLYNHHYHHHYLNPPPIQDGGGS--------PSV-----LY 273
                 N+  ++L          HH+HH Y N      GGG+        PSV     ++
Sbjct: 265 FSPGMVNYGAISL----------HHHHHPYRNS--YGGGGGNSYGFGGRVPSVCSAGPVF 324

Query: 274 HLRSAPPPPP--------VAVGGGGRGI------------GKGAASSKTLRLFGVNMEC- 333
           +LRS+  P          V  GGGG G+             K AA+ K LRLFGVN+EC 
Sbjct: 325 YLRSSAAPQEEQQAAGVVVQRGGGGGGVEQMVFDSVPVVHAKAAAAGKRLRLFGVNVECP 384

Query: 334 AVSEDQSDDECDITTSTTTMSP---------------------QFRVYDGMPMSIPIRMP 341
           A SE +     D    T  +SP                     Q R+Y+G P      +P
Sbjct: 385 AESESEESSTYDTHHHTMAVSPHHLHLSSTSSSPSPNSQSPLGQLRLYNGTP------IP 432

[Close]
BLAST of CmoCh04G007860 vs. TrEMBL
Match: A0A0D2Q216_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G261100 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 2.2e-64
Identity = 169/341 (49.56%), Postives = 202/341 (59.24%), Query Frame = 1 

Query: 29  SSSLFVEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNDKGLLLNFEDRCGKS 88
           S+S  +EKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSS++DKGLLLNFEDR GK 
Sbjct: 102 SASGNIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSTSDKGLLLNFEDRNGKP 161

Query: 89  WRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGLGHLGKDRFFIDWRRRPPHA 148
           WRFRYSYW SSQSYVMTKGWSRFVK+K+LDAGDIVSFQRG+G LGKDR FIDWRRR P A
Sbjct: 162 WRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRGVGELGKDRLFIDWRRR-PDA 221

Query: 149 PLDTPITFHHNHHLHGGGAAGVAQIPHHFHLHQ---WTP-VATPLSLPRDHLLHLPQNNS 208
           P D  ++F H                HHF LH+   W P +  P    RDH LHL Q N 
Sbjct: 222 P-DPQVSFLH----------------HHFPLHRSIPWNPLLMRPPPTGRDH-LHLSQINP 281

Query: 209 NHNNLTLFHNDNFNLYNHHYHHHYLNPPPIQDGGGSPSVLYHLRSA--PPPPPVAVG--- 268
              N   ++    NL N                GG+   +++LRSA     P + +G   
Sbjct: 282 LSRN--TYYGGGSNLVN---------------PGGTMGSVFYLRSAVVSTAPQMGMGMME 341

Query: 269 ----GG--------GRGIGKGAASSKTLRLFGVNMECAVSEDQSDDECDITTSTTTMSPQ 328
               GG           + +G A++K LRLFGVNM+C +SE    DE D+ ++TT  +  
Sbjct: 342 WQQHGGVVKPVAFDSVPVVQGQAAAKRLRLFGVNMDCPISE---SDEYDVISTTTIANAT 401

Query: 329 FRVYDGMPMS------IPIRMPNSNNKLTTDFF--NKGKSS 341
                  P S      + +R+ N      TDF   NKGK+S
Sbjct: 402 MAASQTRPSSTSSQHPLQLRLYNGTPLPPTDFLNPNKGKAS 403

[Close]
BLAST of CmoCh04G007860 vs. TrEMBL
Match: U5GXP9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s45650g PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 3.8e-64
Identity = 180/379 (47.49%), Postives = 214/379 (56.46%), Query Frame = 1 

Query: 16  DFEKEQQQQQEMESSSLFVEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNDK 75
           D   E++  +   SS   +EKEHMFDKVVTPSDVGKLNRLVIPKQHAEKY PLDSSSN+K
Sbjct: 86  DVNDEEEGGRGESSSVQVIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYLPLDSSSNEK 145

Query: 76  GLLLNFEDRCGKSWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGLGHLGKD 135
           GLLLNFED  GK+WRFRYSYW SSQSYVMTKGWSRFVKEK+LDAGDIVSFQRG+G LGKD
Sbjct: 146 GLLLNFEDMNGKAWRFRYSYWGSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGELGKD 205

Query: 136 RFFIDWRRRPPHAPLDTPITFHHNHHLHGGGAAGVAQIPHHFHLHQWTPVA----TPLSL 195
           R +I+WRRRP  AP D      H HH H           HHF    W+P+     T   L
Sbjct: 206 RLYINWRRRPD-APDDPS---RHQHHFHN----------HHFSAIPWSPLLMRPPTVPVL 265

Query: 196 PRDHLLHLPQNNSNHNNLTLFHNDNFNLYNHHYHHHYLNPPPIQDGGGSPSVLYHLRSA- 255
           PRDHL HL  +N N N        ++  Y +  + + +NP        S SV Y   SA 
Sbjct: 266 PRDHL-HL--SNPNRNTCYKVGGSSYG-YGYGNYSNVVNPC-----SSSGSVFYMTSSAG 325

Query: 256 ------PPPPPVAVG------GGGRGIG----------KGAASSKTLRLFGVNMECAVSE 315
                 P P  V +G      GGG  +           +G A++K LRLFGVNM+C ++ 
Sbjct: 326 AGAALEPAPQQVGMGMVQWQLGGGGVVEPVVYESVPVVQGKAAAKRLRLFGVNMDCPIT- 385

Query: 316 DQSDD---ECDITTSTTTMSP-----------------------QFRVYDGMPMSIPIRM 342
           DQSDD   +   TT+  T  P                       Q R+Y G P++    M
Sbjct: 386 DQSDDYGHKLSSTTAAATTLPHNATIALQPTPQLSSQSLQHPLHQLRLYRGTPLA---AM 433

[Close]
BLAST of CmoCh04G007860 vs. TrEMBL
Match: A0A067JMG9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20332 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 3.8e-64
Identity = 168/354 (47.46%), Postives = 202/354 (57.06%), Query Frame = 1 

Query: 28  ESSSLFVEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNDKGLLLNFEDRCGK 87
           + S   VEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSS+N+KGLLLNFEDR  K
Sbjct: 84  DQSVAVVEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSTNEKGLLLNFEDRTRK 143

Query: 88  SWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGLGHLGKDRFFIDWRRRPPH 147
           +WRFRYSYW SSQSYVMTKGWSRFVK+K+LDAGDIVSFQRG+G  GKDR +IDWRRRP  
Sbjct: 144 AWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRGMGDSGKDRLYIDWRRRP-- 203

Query: 148 APLDTPITFHHNHHLHGGGAAGVAQIPHHFHLHQWTPV-----ATPLSLPRDHLLHLPQN 207
              D P    HN H H      ++ IP       W+P+     A P+ +PRDHL HL   
Sbjct: 204 ---DAPDPTSHNQHRH------LSSIP-------WSPLLMRPPAVPM-VPRDHL-HLS-- 263

Query: 208 NSNHNNLTLFHNDNFNLYNHHYHHHYLNPPPIQDGGGSPSVLYHLRSAPPPPPVAVG--- 267
                      N N N+YN++  + Y           S   + ++RSA P   V  G   
Sbjct: 264 -----------NPNRNMYNYNIGYGYAYS---SSNSSSTGTIVYMRSAAPQQ-VGTGMVQ 323

Query: 268 ---GGGRG-----------IGKGAASSKTLRLFGVNMECAVSEDQSDDECD--------- 327
              GGG G           + +G A+ K LRLFGVNM+C + + Q   ECD         
Sbjct: 324 RQQGGGGGFVEPMVYESVPVVQGKAALKRLRLFGVNMDCLIMDSQ---ECDKIMSSPLPI 383

Query: 328 -ITTSTTTMSP---------QFRVYDGMPMSIPIRMPNSNNKLTTDFFNKGKSS 341
            I +S++TM+          Q R Y+G  +  P           T F +KGKSS
Sbjct: 384 AIPSSSSTMAQLSSASHNPLQLRHYNGTQLPPP----------PTQFLHKGKSS 387

[Close]
BLAST of CmoCh04G007860 vs. TAIR10
Match: AT2G46870.1 (AT2G46870.1 AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 208.4 bits (529), Expect = 7.1e-54
Identity = 113/180 (62.78%), Postives = 127/180 (70.56%), Query Frame = 1 

Query: 18  EKEQQQQQEMESSSLFVEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNDKGL 77
           E+E +   E E +    ++EHMFDKVVTPSDVGKLNRLVIPKQHAE++FPLDSSSN+KGL
Sbjct: 13  EEEAKPLAEEEGAREVADREHMFDKVVTPSDVGKLNRLVIPKQHAERFFPLDSSSNEKGL 72

Query: 78  LLNFEDRCGKSWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGLGHLGKD-R 137
           LLNFED  GKSWRFRYSYW SSQSYVMTKGWSRFVK+K+LDAGDIVSFQR +G  G+D R
Sbjct: 73  LLNFEDLTGKSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRCVGDSGRDSR 132

Query: 138 FFIDWRRRP-----PHAPLDT--------PITFH--HNH----HLHGGGAAGVAQIPHHF 178
            FIDWRRRP     PH             P T +  +NH    H H GG     QIP  F
Sbjct: 133 LFIDWRRRPKVPDHPHFAAGAMFPRFYSFPSTNYSLYNHQQQRHHHSGGGYNYHQIPREF 192

[Close]
BLAST of CmoCh04G007860 vs. TAIR10
Match: AT1G01030.1 (AT1G01030.1 AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 193.7 bits (491), Expect = 1.8e-49
Identity = 126/275 (45.82%), Postives = 151/275 (54.91%), Query Frame = 1 

Query: 35  EKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNDKGLLLNFEDRCGKSWRFRYS 94
           EKEHMFDKVVTPSDVGKLNRLVIPKQHAE+YFPLDSS+N  G LLNF+DR GK WRFRYS
Sbjct: 51  EKEHMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDSSNNQNGTLLNFQDRNGKMWRFRYS 110

Query: 95  YWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGLG-HLGKDRFFIDWRRRPPHAPLDTP 154
           YW SSQSYVMTKGWSRFVKEK+LDAGDIVSFQRG+G    + + +IDWR RP     D  
Sbjct: 111 YWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGIGDESERSKLYIDWRHRP-----DMS 170

Query: 155 ITFHHNHHLHG--GGAAGVAQIPHHFHLHQWTPVATPLSLPRDHLLHLPQNNSNHNNLTL 214
           +   H     G        +Q  + FH     P+    S+P    L++  +  ++ N   
Sbjct: 171 LVQAHQFGNFGFNFNFPTTSQYSNRFH-----PLPEYNSVPIHRGLNIGNHQRSYYNTQR 230

Query: 215 FHNDNFNLYNHHYHHHYLNPPPIQDG--GGSPSVLYHLRSAP-----------PPPPVAV 274
                +   N     +Y   P       G  P V+  +   P           PPPP   
Sbjct: 231 QEFVGYGYGNLAGRCYYTGSPLDHRNIVGSEPLVIDSVPVVPGRLTPVMLPPLPPPPSTA 290

Query: 275 GGGGRGIGKGAASSKTLRLFGVNMECAVSEDQSDD 294
           G             K LRLFGVNMEC    +Q ++
Sbjct: 291 G-------------KRLRLFGVNMECGNDYNQQEE 302

[Close]
BLAST of CmoCh04G007860 vs. TAIR10
Match: AT3G61970.1 (AT3G61970.1 AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 187.2 bits (474), Expect = 1.7e-47
Identity = 122/294 (41.50%), Postives = 158/294 (53.74%), Query Frame = 1 

Query: 20  EQQQQQEMESSSLFVEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSS---NDKG 79
           ++ +++ +E +S  +E+EHMFDKVVTPSDVGKLNRLVIPKQHAE+YFPLD+S+   ++KG
Sbjct: 3   QEDKEKPIEEASSSMEREHMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDNSTTNDSNKG 62

Query: 80  LLLNFEDRCGKSWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGLGHLGKDR 139
           LLLNFEDR G SWRFRYSYW SSQSYVMTKGWSRFVK+K+LDAGDIVSFQR      KD+
Sbjct: 63  LLLNFEDRSGNSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQR--DSCNKDK 122

Query: 140 FFIDWRRRPPHAPLDTPITFHHNHHLHGGGAAGVAQIPHHFHLHQWTPVATPLSLPRDHL 199
            +IDWRRRP        I  HH+    G         PH                     
Sbjct: 123 LYIDWRRRP-------KIPDHHHQQFAGAMFPRFYTFPHP-------------------- 182

Query: 200 LHLPQNNSNHNNLTLFHNDNFNLYNHHYHHHYLNPPPIQDGGGSPSVLYHLRSAPPPPPV 259
             +P N   HN    FH  +  +  +       +P  + +                  PV
Sbjct: 183 -QMPTNYETHNLYHRFHQRDLGIGYYVRSMERSHPTAVIES----------------VPV 242

Query: 260 AVGGGGRGIGKGAASSKTLRLFGVNMECAVSEDQSDDECDITTSTTTMSPQFRV 311
            +    +     +   K LRLFGV+MEC       +   + ++S+    P+ RV
Sbjct: 243 MMQRRAQVASMASRGEKRLRLFGVDMECGGGGGSVNSTEEESSSSGGSIPRGRV 250

[Close]
BLAST of CmoCh04G007860 vs. TAIR10
Match: AT5G06250.2 (AT5G06250.2 AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 163.3 bits (412), Expect = 2.6e-40
Identity = 80/119 (67.23%), Postives = 92/119 (77.31%), Query Frame = 1 

Query: 36  KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPL----------DSSSNDKGLLLNFEDRC 95
           KE +F+K +TPSDVGKLNRLVIPKQHAEKYFPL          D+SS++KG+LL+FED  
Sbjct: 42  KESLFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNAVLVSSAAADTSSSEKGMLLSFEDES 101

Query: 96  GKSWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGLGHLGKDRFFIDWRRR 145
           GKSWRFRYSYW SSQSYV+TKGWSRFVK+K+LD GD+V FQR        R FI WRRR
Sbjct: 102 GKSWRFRYSYWNSSQSYVLTKGWSRFVKDKQLDPGDVVFFQR--HRSDSRRLFIGWRRR 158

[Close]
BLAST of CmoCh04G007860 vs. TAIR10
Match: AT2G36080.1 (AT2G36080.1 AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 158.3 bits (399), Expect = 8.4e-39
Identity = 103/224 (45.98%), Postives = 129/224 (57.59%), Query Frame = 1 

Query: 20  EQQQQQEMESSSLFVEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSND---KG 79
           +QQQQQ+   + +  EKE +F+K +TPSDVGKLNRLVIPKQHAE+YFPL +++ D   KG
Sbjct: 18  QQQQQQQQHQNDVVEEKEALFEKPLTPSDVGKLNRLVIPKQHAERYFPLAAAAADAVEKG 77

Query: 80  LLLNFEDRCGKSWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGLGHLGKDR 139
           LLL FED  GK WRFRYSYW SSQSYV+TKGWSR+VKEK LDAGD+V F R     G  R
Sbjct: 78  LLLCFEDEEGKPWRFRYSYWNSSQSYVLTKGWSRYVKEKHLDAGDVVLFHRHRSDGG--R 137

Query: 140 FFIDWRRRPPHAPLDTPITFHH-------NHHLHGGGAAGVAQIPHHFHLHQWTPVATPL 199
           FFI WRRR   +   +  ++ H        ++ H G  A  +Q  +   L  +      +
Sbjct: 138 FFIGWRRRGDSS--SSSDSYRHVQSNASLQYYPHAGAQAVESQRGNSKTLRLF---GVNM 197

Query: 200 SLPRDHLLHLPQNNSNHNNLTLFHNDNFNLYNHHYHHHYLNPPP 234
               D     P      N  T  H D F+ Y    H+    PPP
Sbjct: 198 ECQLDSDWSEPSTPDGSNTYTTNH-DQFHFYPQQQHY----PPP 229

[Close]
BLAST of CmoCh04G007860 vs. NCBI nr
Match: gi|778690845|ref|XP_011653180.1| (PREDICTED: B3 domain-containing transcription factor NGA1-like [Cucumis sativus])

HSP 1 Score: 384.0 bits (985), Expect = 2.7e-103
Identity = 228/368 (61.96%), Postives = 254/368 (69.02%), Query Frame = 1 

Query: 12  DSSTDFEKEQQQQQEMESS----------SLFVEKEHMFDKVVTPSDVGKLNRLVIPKQH 71
           D     +++QQQ QEME            S+FVEKEHMFDKVVTPSDVGKLNRLVIPKQH
Sbjct: 29  DDEQQQQQQQQQDQEMEEESCNNSNNNNCSIFVEKEHMFDKVVTPSDVGKLNRLVIPKQH 88

Query: 72  AEKYFPLDSSSNDKGLLLNFEDRCGKSWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGD 131
           AEKYFPLDSSSN+KGLLLNFEDRCGK WRFRYSYWTSSQSYVMTKGWSRFVK+KRLDAGD
Sbjct: 89  AEKYFPLDSSSNEKGLLLNFEDRCGKLWRFRYSYWTSSQSYVMTKGWSRFVKDKRLDAGD 148

Query: 132 IVSFQRGLGHLGKDRFFIDWRRRPPHAPLDTPITFHHNHHLHGGGAAGVAQIP------H 191
           IVSFQR L H  +DRFFIDWRRRPPH  +D P  FH     H GG  G AQ P      H
Sbjct: 149 IVSFQRPL-HRNQDRFFIDWRRRPPHPAVDMPFHFHR----HDGG-TGAAQFPPPPPHHH 208

Query: 192 HFHLH-QW--TPVATPLSLPRDHLLHLPQNNSNHNNLTLFHNDNFNLYNHHYHHH-YLNP 251
           HF LH QW   PVATPLSL RDH+LHLPQ N   NN++LFH    N YNHH+HH+ YL  
Sbjct: 209 HFQLHSQWNNNPVATPLSLQRDHVLHLPQYN---NNVSLFH----NTYNHHHHHNRYL-- 268

Query: 252 PPIQDGG-GSPSVLYHLRSAPPPPPV-----------AVGGGGRGIGKGAASSKTLRLFG 311
               DG  G  SV YHLRS   PP V             GGGG GIG+ +A+  TLRLFG
Sbjct: 269 ----DGSYGGASVFYHLRSPIAPPQVESVPVVADGNGGNGGGGSGIGRTSAAKTTLRLFG 328

Query: 312 VNMECAVSEDQSDDECDITTSTTTM--SPQFRVYDGMPM----SIPIRMPNSNNKLTT-D 341
           V+MEC V    SDDECD+ T++  M  S QF VY+GMPM     + ++MP SNN ++T D
Sbjct: 329 VDMECEV----SDDECDVATTSKAMSSSSQFHVYNGMPMPMLTPMTMQMPTSNNNISTMD 373

[Close]
BLAST of CmoCh04G007860 vs. NCBI nr
Match: gi|700198178|gb|KGN53336.1| (hypothetical protein Csa_4G047970 [Cucumis sativus])

HSP 1 Score: 384.0 bits (985), Expect = 2.7e-103
Identity = 228/368 (61.96%), Postives = 254/368 (69.02%), Query Frame = 1 

Query: 12  DSSTDFEKEQQQQQEMESS----------SLFVEKEHMFDKVVTPSDVGKLNRLVIPKQH 71
           D     +++QQQ QEME            S+FVEKEHMFDKVVTPSDVGKLNRLVIPKQH
Sbjct: 29  DDEQQQQQQQQQDQEMEEESCNNSNNNNCSIFVEKEHMFDKVVTPSDVGKLNRLVIPKQH 88

Query: 72  AEKYFPLDSSSNDKGLLLNFEDRCGKSWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGD 131
           AEKYFPLDSSSN+KGLLLNFEDRCGK WRFRYSYWTSSQSYVMTKGWSRFVK+KRLDAGD
Sbjct: 89  AEKYFPLDSSSNEKGLLLNFEDRCGKLWRFRYSYWTSSQSYVMTKGWSRFVKDKRLDAGD 148

Query: 132 IVSFQRGLGHLGKDRFFIDWRRRPPHAPLDTPITFHHNHHLHGGGAAGVAQIP------H 191
           IVSFQR L H  +DRFFIDWRRRPPH  +D P  FH     H GG  G AQ P      H
Sbjct: 149 IVSFQRPL-HRNQDRFFIDWRRRPPHPAVDMPFHFHR----HDGG-TGAAQFPPPPPHHH 208

Query: 192 HFHLH-QW--TPVATPLSLPRDHLLHLPQNNSNHNNLTLFHNDNFNLYNHHYHHH-YLNP 251
           HF LH QW   PVATPLSL RDH+LHLPQ N   NN++LFH    N YNHH+HH+ YL  
Sbjct: 209 HFQLHSQWNNNPVATPLSLQRDHVLHLPQYN---NNVSLFH----NTYNHHHHHNRYL-- 268

Query: 252 PPIQDGG-GSPSVLYHLRSAPPPPPV-----------AVGGGGRGIGKGAASSKTLRLFG 311
               DG  G  SV YHLRS   PP V             GGGG GIG+ +A+  TLRLFG
Sbjct: 269 ----DGSYGGASVFYHLRSPIAPPQVESVPVVADGNGGNGGGGSGIGRTSAAKTTLRLFG 328

Query: 312 VNMECAVSEDQSDDECDITTSTTTM--SPQFRVYDGMPM----SIPIRMPNSNNKLTT-D 341
           V+MEC V    SDDECD+ T++  M  S QF VY+GMPM     + ++MP SNN ++T D
Sbjct: 329 VDMECEV----SDDECDVATTSKAMSSSSQFHVYNGMPMPMLTPMTMQMPTSNNNISTMD 373

[Close]
BLAST of CmoCh04G007860 vs. NCBI nr
Match: gi|659102258|ref|XP_008452034.1| (PREDICTED: B3 domain-containing transcription factor NGA2-like [Cucumis melo])

HSP 1 Score: 380.6 bits (976), Expect = 3.0e-102
Identity = 227/366 (62.02%), Postives = 255/366 (69.67%), Query Frame = 1 

Query: 18  EKEQQQQQEMESS------------SLFVEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKY 77
           +++QQQ QEME              S+FVEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKY
Sbjct: 33  QRKQQQDQEMEEESCNNNSSNNNNCSIFVEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKY 92

Query: 78  FPLDSSSNDKGLLLNFEDRCGKSWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSF 137
           FPLDSSSN+KGLLLNFEDRCGK WRFRYSYWTSSQSYVMTKGWSRFVK+KRLDAGDIVSF
Sbjct: 93  FPLDSSSNEKGLLLNFEDRCGKLWRFRYSYWTSSQSYVMTKGWSRFVKDKRLDAGDIVSF 152

Query: 138 QRGLGHLGKDRFFIDWRRRPPHAPLDTPITFHHNHHLHGGGAAGVAQIP------HHFHL 197
           QR L H  +DRFFIDWRRRPPH  +D P  FH     H GG +  AQ P      HHF L
Sbjct: 153 QRPL-HRNQDRFFIDWRRRPPHPAVDMPFHFHR----HDGGTS-AAQFPPPPPPHHHFQL 212

Query: 198 H-QW--TPVATPLSLPRDHLLHLPQNNSNHNNLTLFHNDNFNLYNHHYHHH--YLNPPPI 257
           H QW   PVATPLSL RDH+LHLPQ N   NN++LFH    N YNHH+HHH  YL     
Sbjct: 213 HSQWNNNPVATPLSLQRDHVLHLPQYN---NNVSLFH----NTYNHHHHHHNRYL----- 272

Query: 258 QDGG-GSPSVLYHLRSAPPPP-----PVAVG-------GGGRGIGKGAASSKTLRLFGVN 317
            DG  G  SV YHLRS   PP     PV V        GGG GIG+ +A+  TLRLFGV+
Sbjct: 273 -DGSYGGASVFYHLRSPIAPPQIESVPVVVDGNGGNGTGGGSGIGRTSAAKTTLRLFGVD 332

Query: 318 MECAVSEDQSDDECDITTSTTTM--SPQFRVYDGMPM----SIPIRMPNSNNKLTT-DFF 341
           MEC V    SDDECD+ T++ TM  S QF VY+GMPM     + ++MP SN+ ++T +FF
Sbjct: 333 MECEV----SDDECDVATTSKTMTSSSQFHVYNGMPMPMLTPMTMQMPTSNDNISTMEFF 375

[Close]
BLAST of CmoCh04G007860 vs. NCBI nr
Match: gi|657967565|ref|XP_008375464.1| (PREDICTED: B3 domain-containing protein Os03g0120900-like [Malus domestica])

HSP 1 Score: 274.6 bits (701), Expect = 2.3e-70
Identity = 189/395 (47.85%), Postives = 219/395 (55.44%), Query Frame = 1 

Query: 7   SRFPLDSSTDFEKEQQQQQEMESSSLFVEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYF 66
           ++  L  S   E  +    + E + + +E+EHMFDKVVTPSDVGKLNRLVIPKQHAEKYF
Sbjct: 75  TKLELMDSXPQENNEDGGAQREENPIPIEREHMFDKVVTPSDVGKLNRLVIPKQHAEKYF 134

Query: 67  PLDSSSNDKGLLLNFEDRCGKSWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQ 126
           PLDSSSN+KGLLLNFEDR GK WRFRYSYW SSQSYVMTKGWSRFVKEK+LDAGDIVSFQ
Sbjct: 135 PLDSSSNEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQ 194

Query: 127 RGLGHLGKDRFFIDWRRRPPHAPLDTPITFHHNHH--LHGGGAAGVAQIPHHFHLHQWTP 186
           RGLG +GKDR FIDWRRRP     D P   HH+HH  LH       A IPH  H + W P
Sbjct: 195 RGLGEVGKDRLFIDWRRRP-----DAPDPNHHHHHHPLHPHYQPNFA-IPHQ-HQYSWNP 254

Query: 187 VATPLSLPRDHLLHLPQNNSNHNNLTLFHNDNFNLYNHHYHHHYLNPPPIQDGGGSPSV- 246
                S+P   LL  P       +  L      N Y  + HH Y N      GGGS S  
Sbjct: 255 ---HRSVPWSPLLMRPPGAVVTQDHLLLSQQQIN-YGVNMHHPYRNTG--TSGGGSGSYG 314

Query: 247 ----------LYHLRSA-PPPPPVAVGGGGRGI-----------GK-------------- 306
                     +Y+LRSA    PP     G  G+           G+              
Sbjct: 315 YGNVVNSTRPIYYLRSASSAAPPQFHEQGDNGVIEFQQHQQVQLGRVHESNMVLESVPVV 374

Query: 307 -GAASSKTLRLFGVNMECAVSEDQSDDECDITTSTTTMSPQF------------------ 341
            G A++K LRLFGVNMEC +SE  SD ECDI +STT  S Q+                  
Sbjct: 375 HGKAAAKKLRLFGVNMECPISE--SDHECDILSSTTLSSSQYHHHHAHHQLSPPSQPPPL 434

[Close]
BLAST of CmoCh04G007860 vs. NCBI nr
Match: gi|694360772|ref|XP_009360230.1| (PREDICTED: B3 domain-containing protein Os03g0120900-like [Pyrus x bretschneideri])

HSP 1 Score: 268.1 bits (684), Expect = 2.1e-68
Identity = 184/394 (46.70%), Postives = 213/394 (54.06%), Query Frame = 1 

Query: 7   SRFPLDSSTDFEKEQQQQQEMESSSLFVEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYF 66
           ++  L  S   E  +    + E + + +E+EHMFDKVVTPSDVGKLNRLVIPKQHAEKYF
Sbjct: 75  TKLELMDSAPRENNEDGGAQREENPIPIEREHMFDKVVTPSDVGKLNRLVIPKQHAEKYF 134

Query: 67  PLDSSSNDKGLLLNFEDRCGKSWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQ 126
           PLDSSSN+KGLLLNFEDR GK WRFRYSYW SSQSYVMTKGWSRFVKEK+LDAGDIVSFQ
Sbjct: 135 PLDSSSNEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQ 194

Query: 127 RGLGHLGKDRFFIDWRRRPPHAPLDTPITFHHNHH--LHGGGAAGVAQIPHHFHLHQWTP 186
           RGLG +GKDR FIDWRRRP     D P   HH+HH  LH       A IPH  H + W P
Sbjct: 195 RGLGEVGKDRLFIDWRRRP-----DAPYPNHHHHHHPLHPHYQPNFA-IPHQ-HQYSWNP 254

Query: 187 VATPLSLPRDHLLHLPQNNSNHNNLTLFHNDNFNL-YNHHYHHHYLNPPPIQDGGG---- 246
                 +P   LL  P        +T  H     + Y  + HH Y N      G G    
Sbjct: 255 ---HRPVPWSPLLMRPPGAV----VTPDHLSQQQINYGVNMHHPYRNTGTSGGGSGSYGY 314

Query: 247 -----SPSVLYHLRSA--PPPPPVAVGGGGR-------------------------GIGK 306
                S   +Y+LRSA    PP     G  R                          +  
Sbjct: 315 GNVVNSTGPIYYLRSASSAAPPQFPEQGDSRLIEFQQHQQVQLGRVHESNMVLESVPVVH 374

Query: 307 GAASSKTLRLFGVNMECAVSEDQSDDECDITTSTTTMSPQF------------------- 341
           G A++K LRLFGVNMEC +SE  SD ECDI +STT  S Q+                   
Sbjct: 375 GKAAAKKLRLFGVNMECPISE--SDHECDILSSTTLSSSQYHHHHAHHQLSPPSQPPPLQ 434

The following BLAST results are available for this feature:
BLAST of CmoCh04G007860 vs. Swiss-Prot
Match NameE-valueIdentityDescription
Y3209_ORYSJ1.1e-5649.28B3 domain-containing protein Os03g0120900 OS=Oryza sativa subsp. japonica GN=Os0... [more]
NGA1_ARATH1.3e-5262.78B3 domain-containing transcription factor NGA1 OS=Arabidopsis thaliana GN=NGA1 P... [more]
Y2835_ORYSJ8.1e-5269.13B3 domain-containing protein Os02g0683500 OS=Oryza sativa subsp. japonica GN=Os0... [more]
Y4814_ORYSJ3.1e-5172.46B3 domain-containing protein Os04g0581400 OS=Oryza sativa subsp. japonica GN=Os0... [more]
NGA3_ARATH3.2e-4845.82B3 domain-containing transcription factor NGA3 OS=Arabidopsis thaliana GN=NGA3 P... [more]
BLAST of CmoCh04G007860 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KZM6_CUCSA1.9e-10361.96Uncharacterized protein OS=Cucumis sativus GN=Csa_4G047970 PE=4 SV=1[more]
W9S0I8_9ROSA1.0e-6445.89B3 domain-containing transcription factor NGA1 OS=Morus notabilis GN=L484_024101... [more]
A0A0D2Q216_GOSRA2.2e-6449.56Uncharacterized protein OS=Gossypium raimondii GN=B456_008G261100 PE=4 SV=1[more]
U5GXP9_POPTR3.8e-6447.49Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s45650g PE=4 SV=1[more]
A0A067JMG9_JATCU3.8e-6447.46Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20332 PE=4 SV=1[more]
BLAST of CmoCh04G007860 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G46870.17.1e-5462.78 AP2/B3-like transcriptional factor family protein[more]
AT1G01030.11.8e-4945.82 AP2/B3-like transcriptional factor family protein[more]
AT3G61970.11.7e-4741.50 AP2/B3-like transcriptional factor family protein[more]
AT5G06250.22.6e-4067.23 AP2/B3-like transcriptional factor family protein[more]
AT2G36080.18.4e-3945.98 AP2/B3-like transcriptional factor family protein[more]
BLAST of CmoCh04G007860 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778690845|ref|XP_011653180.1|2.7e-10361.96PREDICTED: B3 domain-containing transcription factor NGA1-like [Cucumis sativus][more]
gi|700198178|gb|KGN53336.1|2.7e-10361.96hypothetical protein Csa_4G047970 [Cucumis sativus][more]
gi|659102258|ref|XP_008452034.1|3.0e-10262.02PREDICTED: B3 domain-containing transcription factor NGA2-like [Cucumis melo][more]
gi|657967565|ref|XP_008375464.1|2.3e-7047.85PREDICTED: B3 domain-containing protein Os03g0120900-like [Malus domestica][more]
gi|694360772|ref|XP_009360230.1|2.1e-6846.70PREDICTED: B3 domain-containing protein Os03g0120900-like [Pyrus x bretschneider... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003340B3_DNA-bd
IPR015300DNA-bd_pseudobarrel_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0008150 biological_process
cellular_component GO:0005634 nucleus
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G007860.1CmoCh04G007860.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003340B3 DNA binding domainPFAMPF02362B3coord: 40..144
score: 5.1
IPR003340B3 DNA binding domainSMARTSM01019B3_2coord: 40..145
score: 1.0
IPR003340B3 DNA binding domainPROFILEPS50863B3coord: 40..145
score: 14
IPR015300DNA-binding pseudobarrel domainGENE3DG3DSA:2.40.330.10coord: 33..144
score: 8.5
IPR015300DNA-binding pseudobarrel domainunknownSSF101936DNA-binding pseudobarrel domaincoord: 37..142
score: 1.27
NoneNo IPR availablePANTHERPTHR31140FAMILY NOT NAMEDcoord: 34..341
score: 2.8
NoneNo IPR availablePANTHERPTHR31140:SF15SUBFAMILY NOT NAMEDcoord: 34..341
score: 2.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh04G007860Cucsa.106780Cucumber (Gy14) v1cgycmoB0245
CmoCh04G007860CmaCh16G005970Cucurbita maxima (Rimu)cmacmoB337
CmoCh04G007860CmaCh04G007390Cucurbita maxima (Rimu)cmacmoB728
CmoCh04G007860Cla014628Watermelon (97103) v1cmowmB671
CmoCh04G007860Csa4G047970Cucumber (Chinese Long) v2cmocuB705
CmoCh04G007860MELO3C016356Melon (DHL92) v3.5.1cmomeB686
CmoCh04G007860ClCG07G008140Watermelon (Charleston Gray)cmowcgB670
CmoCh04G007860CSPI04G05760Wild cucumber (PI 183967)cmocpiB715
CmoCh04G007860Lsi07G002780Bottle gourd (USVL1VR-Ls)cmolsiB692
CmoCh04G007860Cp4.1LG14g02110Cucurbita pepo (Zucchini)cmocpeB667
CmoCh04G007860MELO3C016356.2Melon (DHL92) v3.6.1cmomedB779
CmoCh04G007860CsaV3_4G005920Cucumber (Chinese Long) v3cmocucB0833
CmoCh04G007860CsaV3_5G001410Cucumber (Chinese Long) v3cmocucB0870
CmoCh04G007860Cla97C07G135270Watermelon (97103) v2cmowmbB748
CmoCh04G007860Bhi01G001809Wax gourdcmowgoB0843
CmoCh04G007860CsGy4G005630Cucumber (Gy14) v2cgybcmoB521
CmoCh04G007860Carg22199Silver-seed gourdcarcmoB0804
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh04G007860CmoCh16G006470Cucurbita moschata (Rifu)cmocmoB285
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh04G007860Cucurbita moschata (Rifu)cmocmoB264
CmoCh04G007860Cucumber (Gy14) v1cgycmoB0833
CmoCh04G007860Cucurbita maxima (Rimu)cmacmoB311
CmoCh04G007860Wild cucumber (PI 183967)cmocpiB734
CmoCh04G007860Cucumber (Chinese Long) v2cmocuB728
CmoCh04G007860Melon (DHL92) v3.5.1cmomeB628
CmoCh04G007860Watermelon (Charleston Gray)cmowcgB637
CmoCh04G007860Cucurbita pepo (Zucchini)cmocpeB661
CmoCh04G007860Cucurbita pepo (Zucchini)cmocpeB673
CmoCh04G007860Cucurbita pepo (Zucchini)cmocpeB684
CmoCh04G007860Bottle gourd (USVL1VR-Ls)cmolsiB611
CmoCh04G007860Cucumber (Gy14) v2cgybcmoB639
CmoCh04G007860Melon (DHL92) v3.6.1cmomedB717
CmoCh04G007860Silver-seed gourdcarcmoB1259
CmoCh04G007860Cucumber (Chinese Long) v3cmocucB0860
CmoCh04G007860Watermelon (97103) v2cmowmbB677
CmoCh04G007860Watermelon (97103) v2cmowmbB733