CmaCh16G005970 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh16G005970
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
Descriptionauxin response factor 17
LocationCma_Chr16 : 3085688 .. 3086662 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTTTGGTTCATCTTCAAGATTTCACCATCAACACCAAGAAATAATGGAAGAGTCTTCTAATTCTGGTGTTTATATAGAGAAAGAGCATATGTTCGACAAGGTTGTGACGCCAAGCGATGTGGGAAAATTGAATCGTTTAGTGATCCCTAAACAACATGCTGAAAAGTTCTTCCCTTTGGATTCTTCATCAAACGAAAAGGGTCTTCTTTTAAGCTTTGAAGATCGCTGTGGTAAGCTATGGCGGTTCCGTTACTCTTACTGGACCAGCAGCCAAAGCTATGTGATGACTAAAGGCTGGAGCCGCTTTGTTAAAGAGAAAAGACTTGATGCTGGTGATATTGTCTCCTTTCAAAGAGGGGTTTGTAAAGATCGGTTTTTTATTGATTGGCGGAGCCGCCCTCCTCGCACGCCGGTGGAGACAGCTTTTCATCACCATGGTGGTGGTGGTTATGGTGGTTATGGTGGTGGTGGTGGTGGTGGACAATTTCCTCCTCACCAATTTCAGCTTCACGGCCAGTGGAATCCAGTGGCCACACCCTTATCTTTACACAGGGACCACGCCTTCCACTTGCAGCAGAATAATAGTGTTCATAATAATGTCAGCCTATTTCATACCACCTATAATCATCAACCGATCGGAGGCGGTGGTTGTGACGGTGGGGCGTCGGTTTTTTTCCAATTGAGATCCCCGGCAGCACTGCCGGGAGTCGACGACGGCGGTCATGGAATTGGGAAAGCTGCTGCAGCTAAGACATTGAGGCTCTTTGGTGTCAATATGGAATGTGTAGTATCTGAAGATTCCGATGACGACGAGGGCGACAAAGTAACAACCTCGACTTCGACAACGTTGTCGTCTCAATTCTGTGTTTATGACGGAATGCCGATGTCGATGTCGATGCCAACAAGCAATCCCAACATACCGATCACGGACTTCTTCGAGAAAGGGAAGTCGTTAGATTTTGGCACTTGA

mRNA sequence

ATGGATTTTGGTTCATCTTCAAGATTTCACCATCAACACCAAGAAATAATGGAAGAGTCTTCTAATTCTGGTGTTTATATAGAGAAAGAGCATATGTTCGACAAGGTTGTGACGCCAAGCGATGTGGGAAAATTGAATCGTTTAGTGATCCCTAAACAACATGCTGAAAAGTTCTTCCCTTTGGATTCTTCATCAAACGAAAAGGGTCTTCTTTTAAGCTTTGAAGATCGCTGTGGTAAGCTATGGCGGTTCCGTTACTCTTACTGGACCAGCAGCCAAAGCTATGTGATGACTAAAGGCTGGAGCCGCTTTGTTAAAGAGAAAAGACTTGATGCTGGTGATATTGTCTCCTTTCAAAGAGGGGTTTGTAAAGATCGGTTTTTTATTGATTGGCGGAGCCGCCCTCCTCGCACGCCGGTGGAGACAGCTTTTCATCACCATGGTGGTGGTGGTTATGGTGGTTATGGTGGTGGTGGTGGTGGTGGACAATTTCCTCCTCACCAATTTCAGCTTCACGGCCAGTGGAATCCAGTGGCCACACCCTTATCTTTACACAGGGACCACGCCTTCCACTTGCAGCAGAATAATAGTGTTCATAATAATGTCAGCCTATTTCATACCACCTATAATCATCAACCGATCGGAGGCGGTGGTTGTGACGGTGGGGCGTCGGTTTTTTTCCAATTGAGATCCCCGGCAGCACTGCCGGGAGTCGACGACGGCGGTCATGGAATTGGGAAAGCTGCTGCAGCTAAGACATTGAGGCTCTTTGGTGTCAATATGGAATGTGTAGTATCTGAAGATTCCGATGACGACGAGGGCGACAAAGTAACAACCTCGACTTCGACAACGTTGTCGTCTCAATTCTGTGTTTATGACGGAATGCCGATGTCGATGTCGATGCCAACAAGCAATCCCAACATACCGATCACGGACTTCTTCGAGAAAGGGAAGTCGTTAGATTTTGGCACTTGA

Coding sequence (CDS)

ATGGATTTTGGTTCATCTTCAAGATTTCACCATCAACACCAAGAAATAATGGAAGAGTCTTCTAATTCTGGTGTTTATATAGAGAAAGAGCATATGTTCGACAAGGTTGTGACGCCAAGCGATGTGGGAAAATTGAATCGTTTAGTGATCCCTAAACAACATGCTGAAAAGTTCTTCCCTTTGGATTCTTCATCAAACGAAAAGGGTCTTCTTTTAAGCTTTGAAGATCGCTGTGGTAAGCTATGGCGGTTCCGTTACTCTTACTGGACCAGCAGCCAAAGCTATGTGATGACTAAAGGCTGGAGCCGCTTTGTTAAAGAGAAAAGACTTGATGCTGGTGATATTGTCTCCTTTCAAAGAGGGGTTTGTAAAGATCGGTTTTTTATTGATTGGCGGAGCCGCCCTCCTCGCACGCCGGTGGAGACAGCTTTTCATCACCATGGTGGTGGTGGTTATGGTGGTTATGGTGGTGGTGGTGGTGGTGGACAATTTCCTCCTCACCAATTTCAGCTTCACGGCCAGTGGAATCCAGTGGCCACACCCTTATCTTTACACAGGGACCACGCCTTCCACTTGCAGCAGAATAATAGTGTTCATAATAATGTCAGCCTATTTCATACCACCTATAATCATCAACCGATCGGAGGCGGTGGTTGTGACGGTGGGGCGTCGGTTTTTTTCCAATTGAGATCCCCGGCAGCACTGCCGGGAGTCGACGACGGCGGTCATGGAATTGGGAAAGCTGCTGCAGCTAAGACATTGAGGCTCTTTGGTGTCAATATGGAATGTGTAGTATCTGAAGATTCCGATGACGACGAGGGCGACAAAGTAACAACCTCGACTTCGACAACGTTGTCGTCTCAATTCTGTGTTTATGACGGAATGCCGATGTCGATGTCGATGCCAACAAGCAATCCCAACATACCGATCACGGACTTCTTCGAGAAAGGGAAGTCGTTAGATTTTGGCACTTGA

Protein sequence

MDFGSSSRFHHQHQEIMEESSNSGVYIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKFFPLDSSSNEKGLLLSFEDRCGKLWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGVCKDRFFIDWRSRPPRTPVETAFHHHGGGGYGGYGGGGGGGQFPPHQFQLHGQWNPVATPLSLHRDHAFHLQQNNSVHNNVSLFHTTYNHQPIGGGGCDGGASVFFQLRSPAALPGVDDGGHGIGKAAAAKTLRLFGVNMECVVSEDSDDDEGDKVTTSTSTTLSSQFCVYDGMPMSMSMPTSNPNIPITDFFEKGKSLDFGT
Homology
[Close]
BLAST of CmaCh16G005970 vs. Swiss-Prot
Match: Y3209_ORYSJ (B3 domain-containing protein Os03g0120900 OS=Oryza sativa subsp. japonica GN=Os03g0120900 PE=2 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 7.0e-53
Identity = 134/281 (47.69%), Postives = 152/281 (54.09%), Query Frame = 1 

Query: 15  EIMEESSNSGVYIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKFFPLDSSSNEKGLLLSF 74
           E+ E    S   +EKEHMFDKVVTPSDVGKLNRLVIPKQHAEK+FPLD++SNEKGLLLSF
Sbjct: 19  EVQESGGRSLAAVEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDAASNEKGLLLSF 78

Query: 75  EDRCGKLWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGV---CKDRFFIDW 134
           EDR GK WRFRYSYW SSQSYVMTKGWSRFVKEKRLDAGD VSF RGV    + R FIDW
Sbjct: 79  EDRTGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRGVGEAARGRLFIDW 138

Query: 135 RSRP-------PRT-----------PVETAFHHHGGGGYGGYGGGGGGGQFPPHQFQLHG 194
           R RP       P T           P     HHHG G         G     P       
Sbjct: 139 RRRPDVVAALQPPTHRFAHHLPSSIPFAPWAHHHGHGAAAAAAAAAGARFLLP------- 198

Query: 195 QWNPVATPLSLH---RDHAFHLQQNNSVHNNVSLFHTTYNHQPIGGGGCDGGASVFFQLR 254
              P +TP+  H     HA       +  +   LF+     Q               Q  
Sbjct: 199 ---PSSTPIYDHHRRHAHAVGYDAYAAATSRQVLFYRPLPPQ---------------QQH 258

Query: 255 SPA----ALPGVDDGGHGIGKAAAAKTLRLFGVNMECVVSE 268
            PA    ++P     GH    +A +K +RLFGVN++C  SE
Sbjct: 259 HPAVVLESVPVRMTAGHAEPPSAPSKRVRLFGVNLDCANSE 274

[Close]
BLAST of CmaCh16G005970 vs. Swiss-Prot
Match: Y4814_ORYSJ (B3 domain-containing protein Os04g0581400 OS=Oryza sativa subsp. japonica GN=Os04g0581400 PE=3 SV=2)

HSP 1 Score: 198.0 bits (502), Expect = 1.6e-49
Identity = 104/153 (67.97%), Postives = 112/153 (73.20%), Query Frame = 1 

Query: 27  IEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKFFPLDSSSNEKGLLLSFEDRCGKLWRFRY 86
           IEKEHMFDKVVTPSDVGKLNRLVIPKQHAEK+FPLDS++NEKGLLLSFEDR GKLWRFRY
Sbjct: 104 IEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSAANEKGLLLSFEDRTGKLWRFRY 163

Query: 87  SYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGVC---KDRFFIDWRSRP-------- 146
           SYW SSQSYVMTKGWSRFVKEKRLDAGD VSF RG     +DR FIDW+ R         
Sbjct: 164 SYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRGAAEATRDRLFIDWKRRADVRDPHRF 223

Query: 147 PRTPVETAFHHHGGGGYGGYGGGGGGGQFPPHQ 169
            R P+           YG +GGG G     P +
Sbjct: 224 QRLPLPMT------SPYGPWGGGAGASSCRPRR 250

[Close]
BLAST of CmaCh16G005970 vs. Swiss-Prot
Match: NGA3_ARATH (B3 domain-containing transcription factor NGA3 OS=Arabidopsis thaliana GN=NGA3 PE=2 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 2.1e-49
Identity = 119/260 (45.77%), Postives = 146/260 (56.15%), Query Frame = 1 

Query: 28  EKEHMFDKVVTPSDVGKLNRLVIPKQHAEKFFPLDSSSNEKGLLLSFEDRCGKLWRFRYS 87
           EKEHMFDKVVTPSDVGKLNRLVIPKQHAE++FPLDSS+N+ G LL+F+DR GK+WRFRYS
Sbjct: 51  EKEHMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDSSNNQNGTLLNFQDRNGKMWRFRYS 110

Query: 88  YWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGVC----KDRFFIDWRSRPPRTPVETA 147
           YW SSQSYVMTKGWSRFVKEK+LDAGDIVSFQRG+     + + +IDWR RP  + V+  
Sbjct: 111 YWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGIGDESERSKLYIDWRHRPDMSLVQA- 170

Query: 148 FHHHGGGGYGGYGGGGGGGQFPPHQFQLHGQWNPVATPLSLHRDHAFHLQQNNSVHNNVS 207
            H  G  G+                F    Q++    PL  +     H   N  + N+  
Sbjct: 171 -HQFGNFGFN-------------FNFPTTSQYSNRFHPLPEYNSVPIHRGLN--IGNHQR 230

Query: 208 LFHTTYNHQPIG------GGGCDGGASVFFQLRSPAALPGVDDGGHGI------------ 264
            ++ T   + +G       G C    S         + P V D    +            
Sbjct: 231 SYYNTQRQEFVGYGYGNLAGRCYYTGSPLDHRNIVGSEPLVIDSVPVVPGRLTPVMLPPL 290

[Close]
BLAST of CmaCh16G005970 vs. Swiss-Prot
Match: Y2835_ORYSJ (B3 domain-containing protein Os02g0683500 OS=Oryza sativa subsp. japonica GN=Os02g0683500 PE=2 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 2.8e-49
Identity = 128/259 (49.42%), Postives = 149/259 (57.53%), Query Frame = 1 

Query: 27  IEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKFFPLDSSSNEKGLLLSFEDRCGKLWRFRY 86
           +EKEHMFDKVVTPSDVGKLNRLVIPKQ+AEK+FPLD+++NEKGLLL+FEDR GK WRFRY
Sbjct: 90  VEKEHMFDKVVTPSDVGKLNRLVIPKQYAEKYFPLDAAANEKGLLLNFEDRAGKPWRFRY 149

Query: 87  SYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGV----CKDRFFIDWRSR-----PPR 146
           SYW SSQSYVMTKGWSRFVKEKRLDAGD VSF RG+     + R FIDW+ R     P R
Sbjct: 150 SYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFSRGIGDEAARHRLFIDWKRRADTRDPLR 209

Query: 147 TPVETAFHHHGGGGYGGYGGGGGGGQF----PPHQFQLH--------GQWNPVAT--PLS 206
            P            Y  +G GGGGG F    PP     H          +NP A      
Sbjct: 210 LPRGLPLPMPLTSHYAPWGIGGGGGFFVQPSPPATLYEHRLRQGLDFRAFNPAAAMGRQV 269

Query: 207 LHRDHAFHLQQNNSVHNNVSLFHTTYNHQPIGGGGCDGGASVFFQLRSPAALPGVDDGGH 263
           L    A    Q   +    S  H  Y  QP G G    G+ V        ++P ++    
Sbjct: 270 LLFGSARIPPQAPLLARAPSPLHHHYTLQPSGDGVRAAGSPVVLD-----SVPVIE---- 329

[Close]
BLAST of CmaCh16G005970 vs. Swiss-Prot
Match: NGA1_ARATH (B3 domain-containing transcription factor NGA1 OS=Arabidopsis thaliana GN=NGA1 PE=1 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.2e-47
Identity = 93/123 (75.61%), Postives = 101/123 (82.11%), Query Frame = 1 

Query: 17  MEESSNSGVYIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKFFPLDSSSNEKGLLLSFED 76
           + E   +    ++EHMFDKVVTPSDVGKLNRLVIPKQHAE+FFPLDSSSNEKGLLL+FED
Sbjct: 19  LAEEEGAREVADREHMFDKVVTPSDVGKLNRLVIPKQHAERFFPLDSSSNEKGLLLNFED 78

Query: 77  RCGKLWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGV----CKDRFFIDWR 136
             GK WRFRYSYW SSQSYVMTKGWSRFVK+K+LDAGDIVSFQR V       R FIDWR
Sbjct: 79  LTGKSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRCVGDSGRDSRLFIDWR 138

[Close]
BLAST of CmaCh16G005970 vs. TrEMBL
Match: A0A0A0KZM6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G047970 PE=4 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 3.0e-103
Identity = 227/379 (59.89%), Postives = 248/379 (65.44%), Query Frame = 1 

Query: 5   SSSRFHH--------------------------QHQEIMEESSNSG------VYIEKEHM 64
           SSSRFHH                          Q QE+ EES N+       +++EKEHM
Sbjct: 7   SSSRFHHHDYYNNSNNTRIRDFDDEQQQQQQQQQDQEMEEESCNNSNNNNCSIFVEKEHM 66

Query: 65  FDKVVTPSDVGKLNRLVIPKQHAEKFFPLDSSSNEKGLLLSFEDRCGKLWRFRYSYWTSS 124
           FDKVVTPSDVGKLNRLVIPKQHAEK+FPLDSSSNEKGLLL+FEDRCGKLWRFRYSYWTSS
Sbjct: 67  FDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNEKGLLLNFEDRCGKLWRFRYSYWTSS 126

Query: 125 QSYVMTKGWSRFVKEKRLDAGDIVSFQRGVCK--DRFFIDWRSRPPRTPVETAFHHHGGG 184
           QSYVMTKGWSRFVK+KRLDAGDIVSFQR + +  DRFFIDWR RPP   V+  FH H   
Sbjct: 127 QSYVMTKGWSRFVKDKRLDAGDIVSFQRPLHRNQDRFFIDWRRRPPHPAVDMPFHFH--- 186

Query: 185 GYGGYGGGGGGGQFPP-----HQFQLHGQW--NPVATPLSLHRDHAFHLQQNNSVHNNVS 244
               + GG G  QFPP     H FQLH QW  NPVATPLSL RDH  HL Q N   NNVS
Sbjct: 187 ---RHDGGTGAAQFPPPPPHHHHFQLHSQWNNNPVATPLSLQRDHVLHLPQYN---NNVS 246

Query: 245 LFHTTYNHQPIGG---GGCDGGASVFFQLRSPAALPGVDD-------------GGHGIGK 304
           LFH TYNH         G  GGASVF+ LRSP A P V+              GG GIG+
Sbjct: 247 LFHNTYNHHHHHNRYLDGSYGGASVFYHLRSPIAPPQVESVPVVADGNGGNGGGGSGIGR 306

Query: 305 AAAAK-TLRLFGVNMECVVSEDSDDDEGDKVTTSTSTTLSSQFCVYDGM------PMSMS 320
            +AAK TLRLFGV+MEC VS    DDE D  TTS + + SSQF VY+GM      PM+M 
Sbjct: 307 TSAAKTTLRLFGVDMECEVS----DDECDVATTSKAMSSSSQFHVYNGMPMPMLTPMTMQ 366

[Close]
BLAST of CmaCh16G005970 vs. TrEMBL
Match: A0A061G9U8_THECC (AP2/B3-like transcriptional factor family protein, putative OS=Theobroma cacao GN=TCM_015590 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 3.7e-61
Identity = 160/339 (47.20%), Postives = 184/339 (54.28%), Query Frame = 1 

Query: 17  MEESSNSGVYIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKFFPLDSSSNEKGLLLSFED 76
           +E  S++   IEKEHMFDKVVTPSDVGKLNRLVIPKQHAEK+FPLDSS+NEKGLLL+FED
Sbjct: 145 LELKSSASANIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSTNEKGLLLNFED 204

Query: 77  RCGKLWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGV---CKDRFFIDWRS 136
           R GK WRFRYSYW SSQSYVMTKGWSRFVK+K+LDAGDIVSFQRGV    KDR FIDWR 
Sbjct: 205 RNGKPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRGVGEFGKDRLFIDWRR 264

Query: 137 RPPRTPVETAFHHHGGGGYGGYGGGGGGGQFPPHQFQLHGQ--WNP-VATPLSLHRDHAF 196
           RP   P   +FH H                   H F  H    W+P +  P    RDH F
Sbjct: 265 RPD-APDPASFHPH------------------QHHFSFHRSIPWSPLLMRPPPTGRDH-F 324

Query: 197 HLQQNNSVHNNVSLFHTTYNHQPIGG---GGCDGGASVFFQLRSPAALPGVDDG-GHGIG 256
           HL Q + ++ N     + Y   P G        G     F  RS  A      G G G+G
Sbjct: 325 HLSQIHPLNRN-----SYYGGYPTGSNVMNPAGGTMEPVFYWRSAVAAAAPQMGMGMGLG 384

Query: 257 K------------------------AAAAKTLRLFGVNMECVVSEDSDDDEGDKVTTSTS 316
                                     AAAK LRLFGVNMEC  S  SD+ E    TT  +
Sbjct: 385 MMEWQQQTGGVVEPIVFDSVPVVQGKAAAKRLRLFGVNMECPTSASSDECEMLSPTTIAN 444

Query: 317 TTLSS---QFCVYDGMPMSMSMPTSNPNIPITDFFEKGK 319
            T++S   Q       P+ + +    P +P TDF    K
Sbjct: 445 ATMASQPPQLSSSSQHPLQLRLYNGTP-LPPTDFLNANK 457

[Close]
BLAST of CmaCh16G005970 vs. TrEMBL
Match: A0A0D2MKI1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G073600 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 3.5e-59
Identity = 157/329 (47.72%), Postives = 177/329 (53.80%), Query Frame = 1 

Query: 21  SNSGVYIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKFFPLDSSSNEKGLLLSFEDRCGK 80
           S S   IEKEH+FDKVVTPSDVGKLNRLVIPKQHAEK FPLDSS+NEKGLLL+FEDR GK
Sbjct: 89  SASAANIEKEHLFDKVVTPSDVGKLNRLVIPKQHAEKHFPLDSSTNEKGLLLNFEDRNGK 148

Query: 81  LWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGV---CKDRFFIDWRSRPPR 140
            WRFRYSYW SSQSYVMTKGWSRFVK+K+LDAGDIVSFQRGV    K R FIDWR RP  
Sbjct: 149 PWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRGVGELGKHRLFIDWRRRPD- 208

Query: 141 TPVETAFHHHGGGGYGGYGGGGGGGQFPPHQFQLHGQ---WNP-VATPLSLHRDHAFHLQ 200
            P   +FH H                   H   LH     W+P +  P    RD  F L 
Sbjct: 209 GPDPVSFHPH------------------THHLSLHRSNTPWSPLLMRPPPTARDR-FQLS 268

Query: 201 QNNSVHNNVSLFHTTYNHQPIGGGGCDGGASVFFQLRSPAALPGVDDGG----------- 260
           Q N ++ N         +  +  GG  G    F    +P        GG           
Sbjct: 269 QINPLNRNSYYGGFPTGNNVVNPGGTMGSVLFFRSAAAPTMEWQQQPGGVVEPIVFDSVP 328

Query: 261 --HGIGKAAAAKTLRLFGVNMECVVSEDSDDDEGDKVTTSTSTTLSS--QFCVYDGMPMS 320
              G G AAAAK LRLFGVNMEC + E  + D     T   +T  S   Q       P+ 
Sbjct: 329 VVQGTG-AAAAKRLRLFGVNMECPIPESHNPDMLSTTTIPNATMASQNPQLSSSSQHPLQ 388

Query: 321 MSMPTSNPNIPITDFF--EKGK---SLDF 323
           + +    P +P  DF    KGK   SLDF
Sbjct: 389 LRLYNGTPVLPPIDFLSANKGKASFSLDF 396

[Close]
BLAST of CmaCh16G005970 vs. TrEMBL
Match: A0A0D2Q216_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G261100 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 2.3e-58
Identity = 159/347 (45.82%), Postives = 189/347 (54.47%), Query Frame = 1 

Query: 4   GSSSRFHHQHQEIMEESSNSGVYIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKFFPLDS 63
           G+S+R        +E  S++   IEKEHMFDKVVTPSDVGKLNRLVIPKQHAEK+FPLDS
Sbjct: 86  GNSTRV--DSDSTLELRSSASGNIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDS 145

Query: 64  SSNEKGLLLSFEDRCGKLWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGV- 123
           S+++KGLLL+FEDR GK WRFRYSYW SSQSYVMTKGWSRFVK+K+LDAGDIVSFQRGV 
Sbjct: 146 STSDKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRGVG 205

Query: 124 --CKDRFFIDWRSRPPRTPVETAFHHHGGGGYGGYGGGGGGGQFPPHQFQLHGQWNP-VA 183
              KDR FIDWR RP     + +F HH                FP H+      WNP + 
Sbjct: 206 ELGKDRLFIDWRRRPDAPDPQVSFLHH---------------HFPLHR---SIPWNPLLM 265

Query: 184 TPLSLHRDHAFHLQQNNSVHNNVSLFHTTYNHQPIGGGGCD----GG--ASVFF------ 243
            P    RDH  HL Q N +  N      TY      GGG +    GG   SVF+      
Sbjct: 266 RPPPTGRDH-LHLSQINPLSRN------TYY-----GGGSNLVNPGGTMGSVFYLRSAVV 325

Query: 244 -------------QLRSPAALPGVDDGGHGIGKAAAAKTLRLFGVNMECVVSEDSDDDEG 303
                        Q       P   D    +   AAAK LRLFGVNM+C +SE  + D  
Sbjct: 326 STAPQMGMGMMEWQQHGGVVKPVAFDSVPVVQGQAAAKRLRLFGVNMDCPISESDEYDVI 385

Query: 304 DKVTTSTSTTLSSQ---FCVYDGMPMSMSMPTSNPNIPITDFFEKGK 319
              T + +T  +SQ          P+ + +    P +P TDF    K
Sbjct: 386 STTTIANATMAASQTRPSSTSSQHPLQLRLYNGTP-LPPTDFLNPNK 399

[Close]
BLAST of CmaCh16G005970 vs. TrEMBL
Match: B9RYX9_RICCO (Transcription factor, putative OS=Ricinus communis GN=RCOM_1314720 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 3.9e-58
Identity = 152/345 (44.06%), Postives = 189/345 (54.78%), Query Frame = 1 

Query: 16  IMEESSNSG-----VYIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKFFPLDSSSNEKGL 75
           I EE   SG     V I+KEHMFDKVVTPSDVGKLNRLVIPKQHAEK+FPLDSS+N+KGL
Sbjct: 81  IFEEEEGSGEGECGVVIQKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSTNDKGL 140

Query: 76  LLSFEDRCGKLWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGV---CKDRF 135
           LL+FED+ GK WRFRYSYW SSQSYVMTKGWSRFVK+K+LDAGDIVSFQRGV    KDR 
Sbjct: 141 LLNFEDKTGKAWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRGVGEAAKDRL 200

Query: 136 FIDWRSRPPRTPVETAFHHHGGGGYGGYGGGGGGGQFPPHQFQLHG----QWNP-VATPL 195
           +IDWR RP         HH                  P H+ Q H      W+P +  P 
Sbjct: 201 YIDWRRRPDGP------HHQ-----------------PTHRHQQHHLSSIPWSPLLMRPP 260

Query: 196 SLHRDHAFHLQQNNSVHNN-----VSLFHTTYNHQPIGG-------GGCDGGASVFFQLR 255
            + RDH FHL   N  +++      S +   Y +            G  + G  ++ +  
Sbjct: 261 PVPRDH-FHLSNPNYYNSSGGGGGASAYGFGYGYNSSNNYNYNSNVGSSNSGTIIYMRSP 320

Query: 256 SPAAL---------------PGVDDGGHGIGKAAAAKTLRLFGVNMECVVSEDSDDDEGD 315
             A +               P V +    +   AAAK LRLFGVNM+C +S+   D E D
Sbjct: 321 QQAGMVQWQQAAASSGGFMEPMVFESVPVVQGKAAAKRLRLFGVNMDCPISD--SDHECD 380

Query: 316 KVTTSTS-TTLSSQFCVYDGMPMSMSMPTSNPNIPITDFFEKGKS 320
           K++TST    +++        P+ + +    P +P   F  KGKS
Sbjct: 381 KLSTSTPIPAMAAALQQPSHHPLQLRLYNGTP-LPSPQFLHKGKS 398

[Close]
BLAST of CmaCh16G005970 vs. TAIR10
Match: AT1G01030.1 (AT1G01030.1 AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 197.6 bits (501), Expect = 1.2e-50
Identity = 119/260 (45.77%), Postives = 146/260 (56.15%), Query Frame = 1 

Query: 28  EKEHMFDKVVTPSDVGKLNRLVIPKQHAEKFFPLDSSSNEKGLLLSFEDRCGKLWRFRYS 87
           EKEHMFDKVVTPSDVGKLNRLVIPKQHAE++FPLDSS+N+ G LL+F+DR GK+WRFRYS
Sbjct: 51  EKEHMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDSSNNQNGTLLNFQDRNGKMWRFRYS 110

Query: 88  YWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGVC----KDRFFIDWRSRPPRTPVETA 147
           YW SSQSYVMTKGWSRFVKEK+LDAGDIVSFQRG+     + + +IDWR RP  + V+  
Sbjct: 111 YWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGIGDESERSKLYIDWRHRPDMSLVQA- 170

Query: 148 FHHHGGGGYGGYGGGGGGGQFPPHQFQLHGQWNPVATPLSLHRDHAFHLQQNNSVHNNVS 207
            H  G  G+                F    Q++    PL  +     H   N  + N+  
Sbjct: 171 -HQFGNFGFN-------------FNFPTTSQYSNRFHPLPEYNSVPIHRGLN--IGNHQR 230

Query: 208 LFHTTYNHQPIG------GGGCDGGASVFFQLRSPAALPGVDDGGHGI------------ 264
            ++ T   + +G       G C    S         + P V D    +            
Sbjct: 231 SYYNTQRQEFVGYGYGNLAGRCYYTGSPLDHRNIVGSEPLVIDSVPVVPGRLTPVMLPPL 290

[Close]
BLAST of CmaCh16G005970 vs. TAIR10
Match: AT2G46870.1 (AT2G46870.1 AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 191.8 bits (486), Expect = 6.5e-49
Identity = 93/123 (75.61%), Postives = 101/123 (82.11%), Query Frame = 1 

Query: 17  MEESSNSGVYIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKFFPLDSSSNEKGLLLSFED 76
           + E   +    ++EHMFDKVVTPSDVGKLNRLVIPKQHAE+FFPLDSSSNEKGLLL+FED
Sbjct: 19  LAEEEGAREVADREHMFDKVVTPSDVGKLNRLVIPKQHAERFFPLDSSSNEKGLLLNFED 78

Query: 77  RCGKLWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGV----CKDRFFIDWR 136
             GK WRFRYSYW SSQSYVMTKGWSRFVK+K+LDAGDIVSFQR V       R FIDWR
Sbjct: 79  LTGKSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRCVGDSGRDSRLFIDWR 138

[Close]
BLAST of CmaCh16G005970 vs. TAIR10
Match: AT3G61970.1 (AT3G61970.1 AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 189.5 bits (480), Expect = 3.2e-48
Identity = 122/252 (48.41%), Postives = 147/252 (58.33%), Query Frame = 1 

Query: 17  MEESSNSGVYIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKFFPLDSSS---NEKGLLLS 76
           +EE+S+S   +E+EHMFDKVVTPSDVGKLNRLVIPKQHAE++FPLD+S+   + KGLLL+
Sbjct: 10  IEEASSS---MEREHMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDNSTTNDSNKGLLLN 69

Query: 77  FEDRCGKLWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGVC-KDRFFIDWR 136
           FEDR G  WRFRYSYW SSQSYVMTKGWSRFVK+K+LDAGDIVSFQR  C KD+ +IDWR
Sbjct: 70  FEDRSGNSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRDSCNKDKLYIDWR 129

Query: 137 SRPPRTPVETAFHHHGGGGYGGYGGGGGGGQFPPHQFQLHGQWNPVATPLSLHR-DHAFH 196
            RP     +   HHH             G  FP      H Q   + T    H   H FH
Sbjct: 130 RRP-----KIPDHHH---------QQFAGAMFPRFYTFPHPQ---MPTNYETHNLYHRFH 189

Query: 197 LQQNNSVHNNVSLFHTTYNHQPIGGGGCDGGASVFFQLRSPAALPGVDDGGHGIGKAAAA 256
            Q++  +   V     ++    I          V  Q R+  A             +   
Sbjct: 190 -QRDLGIGYYVRSMERSHPTAVI------ESVPVMMQRRAQVASMA----------SRGE 224

Query: 257 KTLRLFGVNMEC 264
           K LRLFGV+MEC
Sbjct: 250 KRLRLFGVDMEC 224

[Close]
BLAST of CmaCh16G005970 vs. TAIR10
Match: AT4G01500.1 (AT4G01500.1 AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 162.9 bits (411), Expect = 3.2e-40
Identity = 87/157 (55.41%), Postives = 101/157 (64.33%), Query Frame = 1 

Query: 5   SSSRFHHQHQEIMEESSNSGVYI----EKEHMFDKVVTPSDVGKLNRLVIPKQHAEKFFP 64
           S+     +  EI   SS+   Y      +EHMFDKV+TPSDVGKLNRLVIPKQHAE FFP
Sbjct: 4   STMNLDQELAEIRASSSDHTNYFYSSERREHMFDKVLTPSDVGKLNRLVIPKQHAENFFP 63

Query: 65  LDSSSNEKGLLLSFEDRCGKLWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQR 124
           L+   N+ G +L F+D+ GK+WRFRYSYW SSQSYVMTKGWSRFVKEK+L AGD VSF R
Sbjct: 64  LED--NQNGTVLDFQDKNGKMWRFRYSYWNSSQSYVMTKGWSRFVKEKKLFAGDTVSFYR 123

Query: 125 GVCKDR----------FFIDWRSRPPRTPVETAFHHH 148
           G   D            FIDWR R     V    +H+
Sbjct: 124 GYIPDDNAQPERRRKIMFIDWRPRAEINFVHNINNHN 158

[Close]
BLAST of CmaCh16G005970 vs. TAIR10
Match: AT5G06250.2 (AT5G06250.2 AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 162.2 bits (409), Expect = 5.5e-40
Identity = 82/138 (59.42%), Postives = 99/138 (71.74%), Query Frame = 1 

Query: 11  HQHQEIMEESSNSGVYIE---KEHMFDKVVTPSDVGKLNRLVIPKQHAEKFFPL------ 70
           H+H     E++ +  ++    KE +F+K +TPSDVGKLNRLVIPKQHAEK+FPL      
Sbjct: 21  HRHTTDTSETTTTATWLHDDLKESLFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNAVLVS 80

Query: 71  ----DSSSNEKGLLLSFEDRCGKLWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVS 130
               D+SS+EKG+LLSFED  GK WRFRYSYW SSQSYV+TKGWSRFVK+K+LD GD+V 
Sbjct: 81  SAAADTSSSEKGMLLSFEDESGKSWRFRYSYWNSSQSYVLTKGWSRFVKDKQLDPGDVVF 140

Query: 131 FQRGVCKD-RFFIDWRSR 135
           FQR      R FI WR R
Sbjct: 141 FQRHRSDSRRLFIGWRRR 158

[Close]
BLAST of CmaCh16G005970 vs. NCBI nr
Match: gi|778690845|ref|XP_011653180.1| (PREDICTED: B3 domain-containing transcription factor NGA1-like [Cucumis sativus])

HSP 1 Score: 383.3 bits (983), Expect = 4.3e-103
Identity = 227/379 (59.89%), Postives = 248/379 (65.44%), Query Frame = 1 

Query: 5   SSSRFHH--------------------------QHQEIMEESSNSG------VYIEKEHM 64
           SSSRFHH                          Q QE+ EES N+       +++EKEHM
Sbjct: 7   SSSRFHHHDYYNNSNNTRIRDFDDEQQQQQQQQQDQEMEEESCNNSNNNNCSIFVEKEHM 66

Query: 65  FDKVVTPSDVGKLNRLVIPKQHAEKFFPLDSSSNEKGLLLSFEDRCGKLWRFRYSYWTSS 124
           FDKVVTPSDVGKLNRLVIPKQHAEK+FPLDSSSNEKGLLL+FEDRCGKLWRFRYSYWTSS
Sbjct: 67  FDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNEKGLLLNFEDRCGKLWRFRYSYWTSS 126

Query: 125 QSYVMTKGWSRFVKEKRLDAGDIVSFQRGVCK--DRFFIDWRSRPPRTPVETAFHHHGGG 184
           QSYVMTKGWSRFVK+KRLDAGDIVSFQR + +  DRFFIDWR RPP   V+  FH H   
Sbjct: 127 QSYVMTKGWSRFVKDKRLDAGDIVSFQRPLHRNQDRFFIDWRRRPPHPAVDMPFHFH--- 186

Query: 185 GYGGYGGGGGGGQFPP-----HQFQLHGQW--NPVATPLSLHRDHAFHLQQNNSVHNNVS 244
               + GG G  QFPP     H FQLH QW  NPVATPLSL RDH  HL Q N   NNVS
Sbjct: 187 ---RHDGGTGAAQFPPPPPHHHHFQLHSQWNNNPVATPLSLQRDHVLHLPQYN---NNVS 246

Query: 245 LFHTTYNHQPIGG---GGCDGGASVFFQLRSPAALPGVDD-------------GGHGIGK 304
           LFH TYNH         G  GGASVF+ LRSP A P V+              GG GIG+
Sbjct: 247 LFHNTYNHHHHHNRYLDGSYGGASVFYHLRSPIAPPQVESVPVVADGNGGNGGGGSGIGR 306

Query: 305 AAAAK-TLRLFGVNMECVVSEDSDDDEGDKVTTSTSTTLSSQFCVYDGM------PMSMS 320
            +AAK TLRLFGV+MEC VS    DDE D  TTS + + SSQF VY+GM      PM+M 
Sbjct: 307 TSAAKTTLRLFGVDMECEVS----DDECDVATTSKAMSSSSQFHVYNGMPMPMLTPMTMQ 366

[Close]
BLAST of CmaCh16G005970 vs. NCBI nr
Match: gi|700198178|gb|KGN53336.1| (hypothetical protein Csa_4G047970 [Cucumis sativus])

HSP 1 Score: 383.3 bits (983), Expect = 4.3e-103
Identity = 227/379 (59.89%), Postives = 248/379 (65.44%), Query Frame = 1 

Query: 5   SSSRFHH--------------------------QHQEIMEESSNSG------VYIEKEHM 64
           SSSRFHH                          Q QE+ EES N+       +++EKEHM
Sbjct: 7   SSSRFHHHDYYNNSNNTRIRDFDDEQQQQQQQQQDQEMEEESCNNSNNNNCSIFVEKEHM 66

Query: 65  FDKVVTPSDVGKLNRLVIPKQHAEKFFPLDSSSNEKGLLLSFEDRCGKLWRFRYSYWTSS 124
           FDKVVTPSDVGKLNRLVIPKQHAEK+FPLDSSSNEKGLLL+FEDRCGKLWRFRYSYWTSS
Sbjct: 67  FDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNEKGLLLNFEDRCGKLWRFRYSYWTSS 126

Query: 125 QSYVMTKGWSRFVKEKRLDAGDIVSFQRGVCK--DRFFIDWRSRPPRTPVETAFHHHGGG 184
           QSYVMTKGWSRFVK+KRLDAGDIVSFQR + +  DRFFIDWR RPP   V+  FH H   
Sbjct: 127 QSYVMTKGWSRFVKDKRLDAGDIVSFQRPLHRNQDRFFIDWRRRPPHPAVDMPFHFH--- 186

Query: 185 GYGGYGGGGGGGQFPP-----HQFQLHGQW--NPVATPLSLHRDHAFHLQQNNSVHNNVS 244
               + GG G  QFPP     H FQLH QW  NPVATPLSL RDH  HL Q N   NNVS
Sbjct: 187 ---RHDGGTGAAQFPPPPPHHHHFQLHSQWNNNPVATPLSLQRDHVLHLPQYN---NNVS 246

Query: 245 LFHTTYNHQPIGG---GGCDGGASVFFQLRSPAALPGVDD-------------GGHGIGK 304
           LFH TYNH         G  GGASVF+ LRSP A P V+              GG GIG+
Sbjct: 247 LFHNTYNHHHHHNRYLDGSYGGASVFYHLRSPIAPPQVESVPVVADGNGGNGGGGSGIGR 306

Query: 305 AAAAK-TLRLFGVNMECVVSEDSDDDEGDKVTTSTSTTLSSQFCVYDGM------PMSMS 320
            +AAK TLRLFGV+MEC VS    DDE D  TTS + + SSQF VY+GM      PM+M 
Sbjct: 307 TSAAKTTLRLFGVDMECEVS----DDECDVATTSKAMSSSSQFHVYNGMPMPMLTPMTMQ 366

[Close]
BLAST of CmaCh16G005970 vs. NCBI nr
Match: gi|659102258|ref|XP_008452034.1| (PREDICTED: B3 domain-containing transcription factor NGA2-like [Cucumis melo])

HSP 1 Score: 382.1 bits (980), Expect = 9.6e-103
Identity = 229/393 (58.27%), Postives = 251/393 (63.87%), Query Frame = 1 

Query: 5   SSSRFHH------------------------QHQEIMEESSNSG--------VYIEKEHM 64
           SSSRFHH                        Q QE+ EES N+         +++EKEHM
Sbjct: 7   SSSRFHHHDYYNNKDRRIRDFDDEQQQRKQQQDQEMEEESCNNNSSNNNNCSIFVEKEHM 66

Query: 65  FDKVVTPSDVGKLNRLVIPKQHAEKFFPLDSSSNEKGLLLSFEDRCGKLWRFRYSYWTSS 124
           FDKVVTPSDVGKLNRLVIPKQHAEK+FPLDSSSNEKGLLL+FEDRCGKLWRFRYSYWTSS
Sbjct: 67  FDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNEKGLLLNFEDRCGKLWRFRYSYWTSS 126

Query: 125 QSYVMTKGWSRFVKEKRLDAGDIVSFQRGVCK--DRFFIDWRSRPPRTPVETAFHHHGGG 184
           QSYVMTKGWSRFVK+KRLDAGDIVSFQR + +  DRFFIDWR RPP   V+  FH H   
Sbjct: 127 QSYVMTKGWSRFVKDKRLDAGDIVSFQRPLHRNQDRFFIDWRRRPPHPAVDMPFHFH--- 186

Query: 185 GYGGYGGGGGGGQFPP-----HQFQLHGQW--NPVATPLSLHRDHAFHLQQNNSVHNNVS 244
               + GG    QFPP     H FQLH QW  NPVATPLSL RDH  HL Q N   NNVS
Sbjct: 187 ---RHDGGTSAAQFPPPPPPHHHFQLHSQWNNNPVATPLSLQRDHVLHLPQYN---NNVS 246

Query: 245 LFHTTYNHQPIGGG----GCDGGASVFFQLRSPAALPGVDD--------------GGHGI 304
           LFH TYNH          G  GGASVF+ LRSP A P ++               GG GI
Sbjct: 247 LFHNTYNHHHHHHNRYLDGSYGGASVFYHLRSPIAPPQIESVPVVVDGNGGNGTGGGSGI 306

Query: 305 GKAAAAK-TLRLFGVNMECVVSEDSDDDEGDKVTTSTSTTLSSQFCVYDGM------PMS 325
           G+ +AAK TLRLFGV+MEC VS    DDE D  TTS + T SSQF VY+GM      PM+
Sbjct: 307 GRTSAAKTTLRLFGVDMECEVS----DDECDVATTSKTMTSSSQFHVYNGMPMPMLTPMT 366

[Close]
BLAST of CmaCh16G005970 vs. NCBI nr
Match: gi|590674963|ref|XP_007039313.1| (AP2/B3-like transcriptional factor family protein, putative [Theobroma cacao])

HSP 1 Score: 243.4 bits (620), Expect = 5.4e-61
Identity = 160/339 (47.20%), Postives = 184/339 (54.28%), Query Frame = 1 

Query: 17  MEESSNSGVYIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKFFPLDSSSNEKGLLLSFED 76
           +E  S++   IEKEHMFDKVVTPSDVGKLNRLVIPKQHAEK+FPLDSS+NEKGLLL+FED
Sbjct: 145 LELKSSASANIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSTNEKGLLLNFED 204

Query: 77  RCGKLWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGV---CKDRFFIDWRS 136
           R GK WRFRYSYW SSQSYVMTKGWSRFVK+K+LDAGDIVSFQRGV    KDR FIDWR 
Sbjct: 205 RNGKPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRGVGEFGKDRLFIDWRR 264

Query: 137 RPPRTPVETAFHHHGGGGYGGYGGGGGGGQFPPHQFQLHGQ--WNP-VATPLSLHRDHAF 196
           RP   P   +FH H                   H F  H    W+P +  P    RDH F
Sbjct: 265 RPD-APDPASFHPH------------------QHHFSFHRSIPWSPLLMRPPPTGRDH-F 324

Query: 197 HLQQNNSVHNNVSLFHTTYNHQPIGG---GGCDGGASVFFQLRSPAALPGVDDG-GHGIG 256
           HL Q + ++ N     + Y   P G        G     F  RS  A      G G G+G
Sbjct: 325 HLSQIHPLNRN-----SYYGGYPTGSNVMNPAGGTMEPVFYWRSAVAAAAPQMGMGMGLG 384

Query: 257 K------------------------AAAAKTLRLFGVNMECVVSEDSDDDEGDKVTTSTS 316
                                     AAAK LRLFGVNMEC  S  SD+ E    TT  +
Sbjct: 385 MMEWQQQTGGVVEPIVFDSVPVVQGKAAAKRLRLFGVNMECPTSASSDECEMLSPTTIAN 444

Query: 317 TTLSS---QFCVYDGMPMSMSMPTSNPNIPITDFFEKGK 319
            T++S   Q       P+ + +    P +P TDF    K
Sbjct: 445 ATMASQPPQLSSSSQHPLQLRLYNGTP-LPPTDFLNANK 457

[Close]
BLAST of CmaCh16G005970 vs. NCBI nr
Match: gi|823141075|ref|XP_012470360.1| (PREDICTED: B3 domain-containing protein Os03g0120900-like [Gossypium raimondii])

HSP 1 Score: 236.9 bits (603), Expect = 5.0e-59
Identity = 157/329 (47.72%), Postives = 177/329 (53.80%), Query Frame = 1 

Query: 21  SNSGVYIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKFFPLDSSSNEKGLLLSFEDRCGK 80
           S S   IEKEH+FDKVVTPSDVGKLNRLVIPKQHAEK FPLDSS+NEKGLLL+FEDR GK
Sbjct: 89  SASAANIEKEHLFDKVVTPSDVGKLNRLVIPKQHAEKHFPLDSSTNEKGLLLNFEDRNGK 148

Query: 81  LWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGV---CKDRFFIDWRSRPPR 140
            WRFRYSYW SSQSYVMTKGWSRFVK+K+LDAGDIVSFQRGV    K R FIDWR RP  
Sbjct: 149 PWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRGVGELGKHRLFIDWRRRPD- 208

Query: 141 TPVETAFHHHGGGGYGGYGGGGGGGQFPPHQFQLHGQ---WNP-VATPLSLHRDHAFHLQ 200
            P   +FH H                   H   LH     W+P +  P    RD  F L 
Sbjct: 209 GPDPVSFHPH------------------THHLSLHRSNTPWSPLLMRPPPTARDR-FQLS 268

Query: 201 QNNSVHNNVSLFHTTYNHQPIGGGGCDGGASVFFQLRSPAALPGVDDGG----------- 260
           Q N ++ N         +  +  GG  G    F    +P        GG           
Sbjct: 269 QINPLNRNSYYGGFPTGNNVVNPGGTMGSVLFFRSAAAPTMEWQQQPGGVVEPIVFDSVP 328

Query: 261 --HGIGKAAAAKTLRLFGVNMECVVSEDSDDDEGDKVTTSTSTTLSS--QFCVYDGMPMS 320
              G G AAAAK LRLFGVNMEC + E  + D     T   +T  S   Q       P+ 
Sbjct: 329 VVQGTG-AAAAKRLRLFGVNMECPIPESHNPDMLSTTTIPNATMASQNPQLSSSSQHPLQ 388

Query: 321 MSMPTSNPNIPITDFF--EKGK---SLDF 323
           + +    P +P  DF    KGK   SLDF
Sbjct: 389 LRLYNGTPVLPPIDFLSANKGKASFSLDF 396

The following BLAST results are available for this feature:
BLAST of CmaCh16G005970 vs. Swiss-Prot
Match NameE-valueIdentityDescription
Y3209_ORYSJ7.0e-5347.69B3 domain-containing protein Os03g0120900 OS=Oryza sativa subsp. japonica GN=Os0... [more]
Y4814_ORYSJ1.6e-4967.97B3 domain-containing protein Os04g0581400 OS=Oryza sativa subsp. japonica GN=Os0... [more]
NGA3_ARATH2.1e-4945.77B3 domain-containing transcription factor NGA3 OS=Arabidopsis thaliana GN=NGA3 P... [more]
Y2835_ORYSJ2.8e-4949.42B3 domain-containing protein Os02g0683500 OS=Oryza sativa subsp. japonica GN=Os0... [more]
NGA1_ARATH1.2e-4775.61B3 domain-containing transcription factor NGA1 OS=Arabidopsis thaliana GN=NGA1 P... [more]
BLAST of CmaCh16G005970 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KZM6_CUCSA3.0e-10359.89Uncharacterized protein OS=Cucumis sativus GN=Csa_4G047970 PE=4 SV=1[more]
A0A061G9U8_THECC3.7e-6147.20AP2/B3-like transcriptional factor family protein, putative OS=Theobroma cacao G... [more]
A0A0D2MKI1_GOSRA3.5e-5947.72Uncharacterized protein OS=Gossypium raimondii GN=B456_003G073600 PE=4 SV=1[more]
A0A0D2Q216_GOSRA2.3e-5845.82Uncharacterized protein OS=Gossypium raimondii GN=B456_008G261100 PE=4 SV=1[more]
B9RYX9_RICCO3.9e-5844.06Transcription factor, putative OS=Ricinus communis GN=RCOM_1314720 PE=4 SV=1[more]
BLAST of CmaCh16G005970 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G01030.11.2e-5045.77 AP2/B3-like transcriptional factor family protein[more]
AT2G46870.16.5e-4975.61 AP2/B3-like transcriptional factor family protein[more]
AT3G61970.13.2e-4848.41 AP2/B3-like transcriptional factor family protein[more]
AT4G01500.13.2e-4055.41 AP2/B3-like transcriptional factor family protein[more]
AT5G06250.25.5e-4059.42 AP2/B3-like transcriptional factor family protein[more]
BLAST of CmaCh16G005970 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778690845|ref|XP_011653180.1|4.3e-10359.89PREDICTED: B3 domain-containing transcription factor NGA1-like [Cucumis sativus][more]
gi|700198178|gb|KGN53336.1|4.3e-10359.89hypothetical protein Csa_4G047970 [Cucumis sativus][more]
gi|659102258|ref|XP_008452034.1|9.6e-10358.27PREDICTED: B3 domain-containing transcription factor NGA2-like [Cucumis melo][more]
gi|590674963|ref|XP_007039313.1|5.4e-6147.20AP2/B3-like transcriptional factor family protein, putative [Theobroma cacao][more]
gi|823141075|ref|XP_012470360.1|5.0e-5947.72PREDICTED: B3 domain-containing protein Os03g0120900-like [Gossypium raimondii][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003340B3_DNA-bd
IPR015300DNA-bd_pseudobarrel_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0008150 biological_process
cellular_component GO:0005634 nucleus
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh16G005970.1CmaCh16G005970.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003340B3 DNA binding domainPFAMPF02362B3coord: 33..134
score: 1.0
IPR003340B3 DNA binding domainSMARTSM01019B3_2coord: 33..135
score: 3.0
IPR003340B3 DNA binding domainPROFILEPS50863B3coord: 33..135
score: 14
IPR015300DNA-binding pseudobarrel domainGENE3DG3DSA:2.40.330.10coord: 27..135
score: 3.1
IPR015300DNA-binding pseudobarrel domainunknownSSF101936DNA-binding pseudobarrel domaincoord: 30..125
score: 8.89
NoneNo IPR availablePANTHERPTHR31140FAMILY NOT NAMEDcoord: 12..288
score: 3.7
NoneNo IPR availablePANTHERPTHR31140:SF4B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR NGA1-RELATEDcoord: 12..288
score: 3.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh16G005970Cucsa.106780Cucumber (Gy14) v1cgycmaB0245
CmaCh16G005970Cla014628Watermelon (97103) v1cmawmB307
CmaCh16G005970Csa4G047970Cucumber (Chinese Long) v2cmacuB337
CmaCh16G005970MELO3C016356Melon (DHL92) v3.5.1cmameB301
CmaCh16G005970ClCG07G008140Watermelon (Charleston Gray)cmawcgB301
CmaCh16G005970CSPI04G05760Wild cucumber (PI 183967)cmacpiB342
CmaCh16G005970CmoCh04G007860Cucurbita moschata (Rifu)cmacmoB337
CmaCh16G005970CmoCh16G006470Cucurbita moschata (Rifu)cmacmoB322
CmaCh16G005970Lsi07G002780Bottle gourd (USVL1VR-Ls)cmalsiB326
CmaCh16G005970Cp4.1LG14g02110Cucurbita pepo (Zucchini)cmacpeB344
CmaCh16G005970MELO3C016356.2Melon (DHL92) v3.6.1cmamedB350
CmaCh16G005970CsaV3_4G005920Cucumber (Chinese Long) v3cmacucB0393
CmaCh16G005970CsaV3_5G001410Cucumber (Chinese Long) v3cmacucB0407
CmaCh16G005970Cla97C07G135270Watermelon (97103) v2cmawmbB351
CmaCh16G005970Bhi01G001809Wax gourdcmawgoB0432
CmaCh16G005970CsGy4G005630Cucumber (Gy14) v2cgybcmaB498
CmaCh16G005970Carg14136Silver-seed gourdcarcmaB1286
CmaCh16G005970Carg22199Silver-seed gourdcarcmaB0825
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh16G005970CmaCh04G007390Cucurbita maxima (Rimu)cmacmaB350
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh16G005970Watermelon (97103) v2cmawmbB326
CmaCh16G005970Watermelon (97103) v2cmawmbB345
CmaCh16G005970Cucurbita maxima (Rimu)cmacmaB302
CmaCh16G005970Cucumber (Gy14) v1cgycmaB0831
CmaCh16G005970Cucurbita moschata (Rifu)cmacmoB320
CmaCh16G005970Wild cucumber (PI 183967)cmacpiB347
CmaCh16G005970Cucumber (Chinese Long) v2cmacuB343
CmaCh16G005970Melon (DHL92) v3.5.1cmameB284
CmaCh16G005970Watermelon (Charleston Gray)cmawcgB290
CmaCh16G005970Watermelon (97103) v1cmawmB319
CmaCh16G005970Cucurbita pepo (Zucchini)cmacpeB350
CmaCh16G005970Cucurbita pepo (Zucchini)cmacpeB354
CmaCh16G005970Bottle gourd (USVL1VR-Ls)cmalsiB300
CmaCh16G005970Bottle gourd (USVL1VR-Ls)cmalsiB321
CmaCh16G005970Cucumber (Gy14) v2cgybcmaB338
CmaCh16G005970Cucumber (Gy14) v2cgybcmaB620
CmaCh16G005970Melon (DHL92) v3.6.1cmamedB328
CmaCh16G005970Melon (DHL92) v3.6.1cmamedB341
CmaCh16G005970Cucumber (Chinese Long) v3cmacucB0379
CmaCh16G005970Cucumber (Chinese Long) v3cmacucB0404