Cucsa.105240 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.105240
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionLate embryogenesis abundant family protein
Locationscaffold00929 : 19822 .. 20273 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAGCCATCAGGATCTTAGCCACAAGGCTGATGAGATTGTTGGCCAGGCTCAGGTTAAGAGAGATGAGATGATGAACCAACCCACTACTCAGGACCAATCATCTGCTGCCCAAACTGCGACTGACCTCAAGGATCAAGCCGCAAGTTTCCTTCAACAGGTGATTTTTTtATATTGTTATTGTTATTTAATTAGCAAAATGAATGAACTAAAATGATTTTTGGTGTGAAATAATAATGTGTATAGACTGGAGAGCAAGTGAAGAACATGGCACAAGGAGCCGCTGAGGCAGTGAAGAACACACTTGGGATGAACACTGATAACACTTCAAACACCAACACCCACAATCCAGCCAACAATTCAGCCAACAATCCTACCAACAATCCAGCCAACAACCCTACCAGCAATCCAACCAGCAATCCTACCAGCAATCCATCCACTAGAATTTAA

mRNA sequence

ATGGCAAGCCATCAGGATCTTAGCCACAAGGCTGATGAGATTGTTGGCCAGGCTCAGGTTAAGAGAGATGAGATGATGAACCAACCCACTACTCAGGACCAATCATCTGCTGCCCAAACTGCGACTGACCTCAAGGATCAAGCCGCAAGTTTCCTTCAACAGACTGGAGAGCAAGTGAAGAACATGGCACAAGGAGCCGCTGAGGCAGTGAAGAACACACTTGGGATGAACACTGATAACACTTCAAACaccaacacccacaatccagccaacaattcagccaacaatcctaccaacaatccagccaacaaccctaccagcaatccaaccagcaatcctaccagcaatccatccaCTAGAATTTAA

Coding sequence (CDS)

ATGGCAAGCCATCAGGATCTTAGCCACAAGGCTGATGAGATTGTTGGCCAGGCTCAGGTTAAGAGAGATGAGATGATGAACCAACCCACTACTCAGGACCAATCATCTGCTGCCCAAACTGCGACTGACCTCAAGGATCAAGCCGCAAGTTTCCTTCAACAGACTGGAGAGCAAGTGAAGAACATGGCACAAGGAGCCGCTGAGGCAGTGAAGAACACACTTGGGATGAACACTGATAACACTTCAAACACCAACACCCACAATCCAGCCAACAATTCAGCCAACAATCCTACCAACAATCCAGCCAACAACCCTACCAGCAATCCAACCAGCAATCCTACCAGCAATCCATCCACTAGAATTTAA

Protein sequence

MASHQDLSHKADEIVGQAQVKRDEMMNQPTTQDQSSAAQTATDLKDQAASFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNTNTHNPANNSANNPTNNPANNPTSNPTSNPTSNPSTRI*
Homology
[Close]
BLAST of Cucsa.105240 vs. Swiss-Prot
Match: LEA1_CICAR (Late embryogenesis abundant protein 1 OS=Cicer arietinum PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.2e-08
Identity = 37/82 (45.12%), Postives = 45/82 (54.88%), Query Frame = 1 

Query: 10  KADEIVGQAQVKRDEMMNQPTTQDQSSAAQTATDLKDQAASFLQQTGEQVKNMAQGAAEA 69
           KA +  G+A+ K  EM          S  +TA   KD +A FLQQTGE+VK MAQGA +A
Sbjct: 104 KAQDTTGRAREKGSEM--------GQSTKETAQSGKDNSAGFLQQTGEKVKGMAQGATDA 163

Query: 70  VKNTLGMNTDNTSNTNTHNPAN 92
           VK T GM  D+      H P N
Sbjct: 164 VKQTFGMANDD--KDKDHFPTN 175

[Close]
BLAST of Cucsa.105240 vs. Swiss-Prot
Match: LEA2_CICAR (Late embryogenesis abundant protein 2 OS=Cicer arietinum PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.2e-08
Identity = 37/87 (42.53%), Postives = 45/87 (51.72%), Query Frame = 1 

Query: 5   QDLSHKADEIVGQAQVKRDEMMNQPTTQDQSSAAQTATDLKDQAASFLQQTGEQVKNMAQ 64
           Q    KA +  G+A+ K  EM          S  +TA   KD +A FLQQTGE+ K MAQ
Sbjct: 77  QATKEKAQDTTGRAKEKGSEM--------GQSTKETAQSGKDNSAGFLQQTGEKAKGMAQ 136

Query: 65  GAAEAVKNTLGMNTDNTSNTNTHNPAN 92
           GA +AVK T GM  D+      H P N
Sbjct: 137 GATDAVKQTFGMTNDD--QDKDHFPTN 153

[Close]
BLAST of Cucsa.105240 vs. Swiss-Prot
Match: LEA76_BRANA (Late embryogenesis abundant protein 76 OS=Brassica napus PE=2 SV=2)

HSP 1 Score: 55.5 bits (132), Expect = 4.9e-07
Identity = 34/93 (36.56%), Postives = 48/93 (51.61%), Query Frame = 1 

Query: 16  GQAQVKRDEMMNQPTTQDQSSAAQ----TATDLKDQAASFLQQTGEQVKNMAQGAAEAVK 75
           G+A  ++ +   Q T +   +AAQ    TA   KD+   FL QTGE VK MA GAA+AVK
Sbjct: 153 GEAVKQKAQDAAQYTKETAQNAAQYTKETAEAGKDKTGGFLSQTGEHVKQMAMGAADAVK 212

Query: 76  NTLGMNTDNTSNTNTHNPANNSANNPTNNPANN 105
           +T GM T+       H P   +    + +P  +
Sbjct: 213 HTFGMATE--EEDREHYPGTTTCTTQSTDPTRH 243

[Close]
BLAST of Cucsa.105240 vs. Swiss-Prot
Match: DPOL_ASFL6 (DNA polymerase beta OS=African swine fever virus (isolate Pig/Portugal/Lis 60/1960) GN=DPOL PE=3 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 6.4e-07
Identity = 25/66 (37.88%), Postives = 30/66 (45.45%), Query Frame = 1 

Query: 53   QQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNTNTHNPANNSANNPTNNPANNPTSNPTSN 112
            Q+    +K M +  A    N  G    N +     NPA N A NP  NPA NP  NP  N
Sbjct: 1052 QKVNHSMKKMVEQHAALAGNPAGNPAGNPAGNPAGNPAGNPAGNPAGNPAGNPAGNPAGN 1111

Query: 113  PTSNPS 119
            P  NP+
Sbjct: 1112 PAGNPA 1117


HSP 2 Score: 51.6 bits (122), Expect = 7.0e-06
Identity = 34/118 (28.81%), Postives = 45/118 (38.14%), Query Frame = 1 

Query: 4    HQDLSHKADEIVGQAQVKRDEMMNQPTTQDQS--SAAQTATDLKDQAASFLQQTGEQVKN 63
            HQ++  K    +G       E  N  T   +S   + Q      D+         + V+ 
Sbjct: 1009 HQEIKKK----IGIFADLYKEFFNNTTNPIESFIQSTQFMIHYFDEEQKVNHSMKKMVEQ 1068

Query: 64   MAQGAAEAVKNTLGMNTDNTSNTNTHNPANNSANNPTNNPANNPTSNPTSNPTSNPST 120
             A  A     N  G    N +     NPA N A NP  NPA NP  NP  NP  NP++
Sbjct: 1069 HAALAGNPAGNPAGNPAGNPAGNPAGNPAGNPAGNPAGNPAGNPAGNPAGNPAGNPAS 1122

[Close]
BLAST of Cucsa.105240 vs. Swiss-Prot
Match: LEA3_WHEAT (Late embryogenesis abundant protein, group 3 OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 7.0e-06
Identity = 32/90 (35.56%), Postives = 39/90 (43.33%), Query Frame = 1 

Query: 13  EIVGQAQVKRDEMMNQPTTQDQSSAAQTATDLKDQAASFLQQTGEQVKNMAQGAAEAVKN 72
           E   Q   +  E   Q  ++      ++A   KD+  S LQQ GE V N   GA +AV N
Sbjct: 134 EAARQKAAEATEAAKQKASETAQYTKESAVTGKDKTGSVLQQAGETVVNAVVGAKDAVAN 193

Query: 73  TLGMNTDNTSNT--NTHNPANNSANNPTNN 101
           TLGM  DNT  T  NT           T N
Sbjct: 194 TLGMGGDNTITTKDNTTGATTKDTTTTTRN 223

[Close]
BLAST of Cucsa.105240 vs. TrEMBL
Match: A0A0A0K8V2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G433240 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 3.7e-62
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 1 

Query: 1   MASHQDLSHKADEIVGQAQVKRDEMMNQPTTQDQSSAAQTATDLKDQAASFLQQTGEQVK 60
           MASHQDLSHKADEIVGQAQVKRDEMMNQPTTQDQSSAAQTATDLKDQAASFLQQTGEQVK
Sbjct: 1   MASHQDLSHKADEIVGQAQVKRDEMMNQPTTQDQSSAAQTATDLKDQAASFLQQTGEQVK 60

Query: 61  NMAQGAAEAVKNTLGMNTDNTSNTNTHNPANNSANNPTNNPANNPTSNPTSNPTSNPSTR 120
           NMAQGAAEAVKNTLGMNTDNTSNTNTHNPANNSANNPTNNPANNPTSNPTSNPTSNPSTR
Sbjct: 61  NMAQGAAEAVKNTLGMNTDNTSNTNTHNPANNSANNPTNNPANNPTSNPTSNPTSNPSTR 120

Query: 121 I 122
           I
Sbjct: 121 I 121

[Close]
BLAST of Cucsa.105240 vs. TrEMBL
Match: B9RV16_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0898010 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 2.1e-20
Identity = 62/125 (49.60%), Postives = 78/125 (62.40%), Query Frame = 1 

Query: 16  GQAQVKRDEMMNQPTTQDQSSAAQTATDLK--DQAASFLQQTGEQVKNMAQGAAEAVKNT 75
           GQ Q+KRDE  N P+ Q +    Q+  D     QA +FLQQTGEQVK+MAQGAAEAVKNT
Sbjct: 12  GQPQLKRDEHANHPSHQSRGPHDQSGQDQSYTTQATNFLQQTGEQVKSMAQGAAEAVKNT 71

Query: 76  LGMNTDNTSN-TNTHNPANNSANNPTN----------NPANNPTS------NPTSNPTSN 122
           LGM  +++ N +NT +P+NN +NNP+N          NP NNP+        PT+NP  N
Sbjct: 72  LGMTAESSPNPSNTSHPSNNPSNNPSNPSHSINQPATNPGNNPSDLSHSIHQPTTNPGGN 131

[Close]
BLAST of Cucsa.105240 vs. TrEMBL
Match: B9GKX8_POPTR (Late embryogenesis abundant family protein OS=Populus trichocarpa GN=POPTR_0001s17300g PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 3.0e-19
Identity = 65/122 (53.28%), Postives = 78/122 (63.93%), Query Frame = 1 

Query: 6   DLSHKADEIVGQAQVKRDEMMNQ------PTTQDQSSAAQTATDLKDQAASFLQQTGEQV 65
           D+++ A E+ GQAQ K+D++M+Q       +TQD S  AQ        A+SFL QTGEQV
Sbjct: 7   DITYNAGELAGQAQAKKDDVMDQCQEGLNQSTQDSSYTAQ--------ASSFLHQTGEQV 66

Query: 66  KNMAQGAAEAVKNTLGMNTDNTSNTNTHNPANNSANNPTNNPANNPTSNPTSNPTSNPST 122
           KNMAQGAAEAVKNTLGMNT+NT  TNT     +S N+P N           SNP SNPST
Sbjct: 67  KNMAQGAAEAVKNTLGMNTENTPTTNT-----SSLNHPIN----------PSNP-SNPST 104

[Close]
BLAST of Cucsa.105240 vs. TrEMBL
Match: A0A061GBL6_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_028329 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 3.3e-18
Identity = 49/94 (52.13%), Postives = 67/94 (71.28%), Query Frame = 1 

Query: 5  QDLSHKADEIVGQAQVKRDEMMNQPTTQDQSSAAQTATDLKDQAASFLQQTGEQVKNMAQ 64
          Q++ ++  +I GQAQVK+DE MNQ +    + ++   + +  QA +FLQQTGEQVKNMAQ
Sbjct: 7  QNIGNQGGDITGQAQVKKDETMNQASQGTNTQSSDQNSSIASQATNFLQQTGEQVKNMAQ 66

Query: 65 GAAEAVKNTLGMNTDNTSNTNTHNPANNSANNPT 99
          GAA+AVKNTLGMN DN+SN     P+ N  +NP+
Sbjct: 67 GAADAVKNTLGMNNDNSSNA----PSTNHPSNPS 96

[Close]
BLAST of Cucsa.105240 vs. TrEMBL
Match: A0A059BSC4_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02549 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 6.8e-16
Identity = 51/107 (47.66%), Postives = 71/107 (66.36%), Query Frame = 1 

Query: 5   QDLSHKADEIVGQAQVKRDEMMNQPTTQDQSS-------AAQTATDLKDQAASFLQQTGE 64
           QD+ + A ++ GQAQ+K++E M+Q + + Q++          +  D+K QA +FLQQTGE
Sbjct: 6   QDIGYAAGQMTGQAQLKKEECMDQASNEYQATMDKLSGTTPNSGYDIKGQATNFLQQTGE 65

Query: 65  QVKNMAQGAAEAVKNTLGMNTDNTSN-TNTHNPANNSANNPTNNPAN 104
           QVK+MA GAAEAVK+TLGMN D   +   T NP NN  + P NNPA+
Sbjct: 66  QVKSMAHGAAEAVKSTLGMNNDAAGDAAATVNPPNN-PSYPANNPAS 111

[Close]
BLAST of Cucsa.105240 vs. TAIR10
Match: AT1G52680.1 (AT1G52680.1 late embryogenesis abundant protein-related / LEA protein-related)

HSP 1 Score: 79.3 bits (194), Expect = 1.8e-15
Identity = 49/118 (41.53%), Postives = 64/118 (54.24%), Query Frame = 1 

Query: 1   MASHQDLSHKADEIVGQAQVKRDEMMNQPT--------------TQDQSSAAQTATDLKD 60
           M+S Q LSH A E+ GQ Q+K++E +N  +              +Q  S   Q    L  
Sbjct: 1   MSSSQQLSHSAGEVTGQVQLKKEEYLNNVSHAMNQNADHHTHSQSQLHSEHDQNNPSLIS 60

Query: 61  QAASFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNTNTHNPANNSANNPTNNPANN 105
           QA+S +QQTG QVKNMAQGAA+AVKNTLGM           +PA NS ++P     +N
Sbjct: 61  QASSVIQQTGGQVKNMAQGAADAVKNTLGM-----------SPATNSPSSPAGTTRSN 107

[Close]
BLAST of Cucsa.105240 vs. TAIR10
Match: AT1G15415.1 (AT1G15415.1 The protein encoded by this gene was identified as a part of pollen proteome by mass spec analysis. It has weak homology to LEA (late embryo abundant) proteins. Encodes protein phosphatase 2A (PP2A) B'gamma subunit. Targeted to nucleus and cytosol.)

HSP 1 Score: 68.9 bits (167), Expect = 2.4e-12
Identity = 43/104 (41.35%), Postives = 55/104 (52.88%), Query Frame = 1 

Query: 1   MASHQD--LSHKADEIVGQAQVKRDEMMNQPTTQDQSSAAQTATDLKDQAASFLQQTGEQ 60
           MAS QD   S +A +IVGQA VK ++  N                   QA+ FLQQ GE+
Sbjct: 1   MASGQDEEFSVRAGQIVGQAHVKENDCNNS-----------------SQASGFLQQKGEK 60

Query: 61  VKNMAQGAAEAVKNTLGMNTDNTSNTNTHNPANNSANNPTNNPA 103
           VK+MA  A+EAVKN LG+N DN       NP +    N T +P+
Sbjct: 61  VKSMAHDASEAVKNKLGINNDNNEEYKNKNPLDKKNPNNTTSPS 87

[Close]
BLAST of Cucsa.105240 vs. TAIR10
Match: AT4G13560.1 (AT4G13560.1 Late embryogenesis abundant protein (LEA) family protein)

HSP 1 Score: 53.1 bits (126), Expect = 1.4e-07
Identity = 33/73 (45.21%), Postives = 42/73 (57.53%), Query Frame = 1 

Query: 6   DLSHKA-DEIVGQAQVKRDEMMNQPTTQDQSSAAQTATDLKDQAASFLQQTGEQVKNMAQ 65
           DL+  A D+     Q  RD+     T     SA ++A   ++QAA    QTGE VKNMAQ
Sbjct: 39  DLTQSARDKAADLTQSARDK-----TADGSHSANKSAQHNQEQAAGLFGQTGESVKNMAQ 98

Query: 66  GAAEAVKNTLGMN 78
           GA + VKN+LGMN
Sbjct: 99  GALDGVKNSLGMN 106

[Close]
BLAST of Cucsa.105240 vs. TAIR10
Match: AT3G15670.1 (AT3G15670.1 Late embryogenesis abundant protein (LEA) family protein)

HSP 1 Score: 53.1 bits (126), Expect = 1.4e-07
Identity = 37/99 (37.37%), Postives = 49/99 (49.49%), Query Frame = 1 

Query: 16  GQAQVKRDEMMNQPTTQDQSSAAQ----TATDLKDQAASFLQQTGEQVKNMAQGAAEAVK 75
           G+A   + +   Q T +    AAQ    TA   +D+   FL QTGE VK MA GAA+AVK
Sbjct: 127 GEAIKNKAQDAAQYTKETAQGAAQYTKETAEAGRDKTGGFLSQTGEHVKQMAMGAADAVK 186

Query: 76  NTLGMNTDNTSNTNTHNPANNSANNPTNNPANNPTSNPT 111
           +T GM T+       H P +      T   A   T++PT
Sbjct: 187 HTFGMATE--EEDKEHYPGST-----TTTTATTRTTDPT 218

[Close]
BLAST of Cucsa.105240 vs. TAIR10
Match: AT1G52690.1 (AT1G52690.1 Late embryogenesis abundant protein (LEA) family protein)

HSP 1 Score: 50.4 bits (119), Expect = 8.8e-07
Identity = 27/94 (28.72%), Postives = 46/94 (48.94%), Query Frame = 1 

Query: 5   QDLSHKADEIVGQAQVKRDEMMNQPTTQDQSSAAQTATDLKDQAASFLQQTGEQVKNMAQ 64
           Q+ + ++ +  G    +  E +            +TA   K++ +  L QTGEQVK MA 
Sbjct: 70  QERAQESKDKTGSYMSETGEAIKNKAHDAAEYTKETAEAGKEKTSGILGQTGEQVKQMAM 129

Query: 65  GAAEAVKNTLGMNTDNTSNTNTHNPANNSANNPT 99
           GA +AVK+TLG+ TD  +  +  +  + +    T
Sbjct: 130 GATDAVKHTLGLRTDEGNKEHVSSAPSTTTTTTT 163

[Close]
BLAST of Cucsa.105240 vs. NCBI nr
Match: gi|449436603|ref|XP_004136082.1| (PREDICTED: late embryogenesis abundant protein 2 [Cucumis sativus])

HSP 1 Score: 245.4 bits (625), Expect = 5.3e-62
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 1 

Query: 1   MASHQDLSHKADEIVGQAQVKRDEMMNQPTTQDQSSAAQTATDLKDQAASFLQQTGEQVK 60
           MASHQDLSHKADEIVGQAQVKRDEMMNQPTTQDQSSAAQTATDLKDQAASFLQQTGEQVK
Sbjct: 1   MASHQDLSHKADEIVGQAQVKRDEMMNQPTTQDQSSAAQTATDLKDQAASFLQQTGEQVK 60

Query: 61  NMAQGAAEAVKNTLGMNTDNTSNTNTHNPANNSANNPTNNPANNPTSNPTSNPTSNPSTR 120
           NMAQGAAEAVKNTLGMNTDNTSNTNTHNPANNSANNPTNNPANNPTSNPTSNPTSNPSTR
Sbjct: 61  NMAQGAAEAVKNTLGMNTDNTSNTNTHNPANNSANNPTNNPANNPTSNPTSNPTSNPSTR 120

Query: 121 I 122
           I
Sbjct: 121 I 121

[Close]
BLAST of Cucsa.105240 vs. NCBI nr
Match: gi|659122328|ref|XP_008461082.1| (PREDICTED: late embryogenesis abundant protein 1 [Cucumis melo])

HSP 1 Score: 190.7 bits (483), Expect = 1.5e-45
Identity = 98/122 (80.33%), Postives = 108/122 (88.52%), Query Frame = 1 

Query: 1   MASHQD-LSHKADEIVGQAQVKRDEMMNQPTTQDQSSAAQTATDLKDQAASFLQQTGEQV 60
           MASHQD LSHKA E VGQAQVK+DEMMNQPT  DQS A QTA+DLKDQAA+FLQQTGEQV
Sbjct: 1   MASHQDNLSHKAGETVGQAQVKKDEMMNQPTAHDQS-ATQTASDLKDQAANFLQQTGEQV 60

Query: 61  KNMAQGAAEAVKNTLGMNTDNTSNTNTHNPANNSANNPTNNPANNPTSNPTSNPTSNPST 120
           KNMAQGAAEAVKNTLGMNTDNTSN N++NP     NNPT NP+NNPT+NP++NPT+NPST
Sbjct: 61  KNMAQGAAEAVKNTLGMNTDNTSNPNSNNP----TNNPTTNPSNNPTTNPSNNPTNNPST 117

Query: 121 RI 122
           RI
Sbjct: 121 RI 117

[Close]
BLAST of Cucsa.105240 vs. NCBI nr
Match: gi|1009174423|ref|XP_015868339.1| (PREDICTED: late embryogenesis abundant protein 2-like [Ziziphus jujuba])

HSP 1 Score: 114.4 bits (285), Expect = 1.4e-22
Identity = 66/117 (56.41%), Postives = 80/117 (68.38%), Query Frame = 1 

Query: 5   QDLSHKADEIVGQAQVKRDEMMNQPTTQDQSSAAQTATDLKDQAASFLQQTGEQVKNMAQ 64
           QDL+++A EI GQAQ+K+DE MNQ +   QSS  Q A+D+K+QA  FLQQTGEQ+KNMAQ
Sbjct: 7   QDLAYQAGEITGQAQMKKDEFMNQSSNPSQSS--QNASDIKEQATHFLQQTGEQMKNMAQ 66

Query: 65  GAAEAVKNTLGMNTDNTSNTNTHNPANNSANNPTNNPANNPTSNPTSNPTSNPSTRI 122
           GAAEAVKNTLGMN DN       NP +  +   TNNP++           SNPSTRI
Sbjct: 67  GAAEAVKNTLGMNADN-------NPTSRGSGG-TNNPSH----------PSNPSTRI 103

[Close]
BLAST of Cucsa.105240 vs. NCBI nr
Match: gi|657961014|ref|XP_008372090.1| (PREDICTED: late embryogenesis abundant protein, group 3-like [Malus domestica])

HSP 1 Score: 111.7 bits (278), Expect = 9.1e-22
Identity = 71/151 (47.02%), Postives = 84/151 (55.63%), Query Frame = 1 

Query: 1   MASHQ--DLSHKADEIVGQAQVKRDEMMNQPTTQDQSS---------------------- 60
           MASHQ  DLSHKA E+ GQAQVK+DE +NQ +   QS+                      
Sbjct: 1   MASHQNQDLSHKAGELTGQAQVKKDEFLNQASGAAQSAQNQASNLSQSAQNKASDASQSA 60

Query: 61  ------AAQTATDLKDQAASFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNTNTHNPA 120
                 A+ T  D+KDQA   LQQT EQV+NMAQGAA+AVKNTLGMN+            
Sbjct: 61  QNKASDASHTGQDIKDQATHLLQQTSEQVRNMAQGAADAVKNTLGMNSP----------- 120

Query: 121 NNSANNPTNNPANNPTSNPTSNPTSNPSTRI 122
            N  +N TN P+N+   N  SNP SNPSTRI
Sbjct: 121 -NDPSNQTNTPSNHTNPNNPSNP-SNPSTRI 138

[Close]
BLAST of Cucsa.105240 vs. NCBI nr
Match: gi|470134235|ref|XP_004302960.1| (PREDICTED: late embryogenesis abundant protein 1 [Fragaria vesca subsp. vesca])

HSP 1 Score: 110.5 bits (275), Expect = 2.0e-21
Identity = 70/136 (51.47%), Postives = 84/136 (61.76%), Query Frame = 1 

Query: 1   MASHQDLSHKADEIVGQAQVKRDEMMN---------QPTTQDQSSAAQ--------TATD 60
           MAS Q   H AD+  GQAQ KRDE+ N         Q      S AAQ        TA D
Sbjct: 1   MASRQP-GHHADDFSGQAQAKRDEIQNKASETAHAAQHKASQASQAAQNKAGDASSTAQD 60

Query: 61  LKDQAASFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNTNTHNPANNSANNPTNNPAN 118
           +KDQA+  LQQTGEQVK+MAQGAAEAVKNTLGMN  N  N  ++NP+N S NNP+N    
Sbjct: 61  IKDQASHLLQQTGEQVKSMAQGAAEAVKNTLGMNNANHPNNPSNNPSNPS-NNPSNPHNA 120

The following BLAST results are available for this feature:
BLAST of Cucsa.105240 vs. Swiss-Prot
Match NameE-valueIdentityDescription
LEA1_CICAR1.2e-0845.12Late embryogenesis abundant protein 1 OS=Cicer arietinum PE=2 SV=1[more]
LEA2_CICAR1.2e-0842.53Late embryogenesis abundant protein 2 OS=Cicer arietinum PE=2 SV=1[more]
LEA76_BRANA4.9e-0736.56Late embryogenesis abundant protein 76 OS=Brassica napus PE=2 SV=2[more]
DPOL_ASFL66.4e-0737.88DNA polymerase beta OS=African swine fever virus (isolate Pig/Portugal/Lis 60/19... [more]
LEA3_WHEAT7.0e-0635.56Late embryogenesis abundant protein, group 3 OS=Triticum aestivum PE=2 SV=1[more]
BLAST of Cucsa.105240 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K8V2_CUCSA3.7e-62100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G433240 PE=4 SV=1[more]
B9RV16_RICCO2.1e-2049.60Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0898010 PE=4 SV=1[more]
B9GKX8_POPTR3.0e-1953.28Late embryogenesis abundant family protein OS=Populus trichocarpa GN=POPTR_0001s... [more]
A0A061GBL6_THECC3.3e-1852.13Uncharacterized protein OS=Theobroma cacao GN=TCM_028329 PE=4 SV=1[more]
A0A059BSC4_EUCGR6.8e-1647.66Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02549 PE=4 SV=1[more]
BLAST of Cucsa.105240 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G52680.11.8e-1541.53 late embryogenesis abundant protein-related / LEA protein-related[more]
AT1G15415.12.4e-1241.35 The protein encoded by this gene was identified as a part of pollen... [more]
AT4G13560.11.4e-0745.21 Late embryogenesis abundant protein (LEA) family protein[more]
AT3G15670.11.4e-0737.37 Late embryogenesis abundant protein (LEA) family protein[more]
AT1G52690.18.8e-0728.72 Late embryogenesis abundant protein (LEA) family protein[more]
BLAST of Cucsa.105240 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449436603|ref|XP_004136082.1|5.3e-62100.00PREDICTED: late embryogenesis abundant protein 2 [Cucumis sativus][more]
gi|659122328|ref|XP_008461082.1|1.5e-4580.33PREDICTED: late embryogenesis abundant protein 1 [Cucumis melo][more]
gi|1009174423|ref|XP_015868339.1|1.4e-2256.41PREDICTED: late embryogenesis abundant protein 2-like [Ziziphus jujuba][more]
gi|657961014|ref|XP_008372090.1|9.1e-2247.02PREDICTED: late embryogenesis abundant protein, group 3-like [Malus domestica][more]
gi|470134235|ref|XP_004302960.1|2.0e-2151.47PREDICTED: late embryogenesis abundant protein 1 [Fragaria vesca subsp. vesca][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.105240.1Cucsa.105240.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34191FAMILY NOT NAMEDcoord: 1..93
score: 2.6
NoneNo IPR availablePANTHERPTHR34191:SF3F6D8.10-RELATEDcoord: 1..93
score: 2.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.105240Cla015385Watermelon (97103) v1cgywmB142
Cucsa.105240Csa7G433240Cucumber (Chinese Long) v2cgycuB126
Cucsa.105240MELO3C023400Melon (DHL92) v3.5.1cgymeB133
Cucsa.105240ClCG09G002700Watermelon (Charleston Gray)cgywcgB141
Cucsa.105240CSPI07G20820Wild cucumber (PI 183967)cgycpiB127
Cucsa.105240CmaCh17G008430Cucurbita maxima (Rimu)cgycmaB0237
Cucsa.105240CmaCh08G006690Cucurbita maxima (Rimu)cgycmaB0240
Cucsa.105240CmoCh17G008150Cucurbita moschata (Rifu)cgycmoB0236
Cucsa.105240CmoCh08G006350Cucurbita moschata (Rifu)cgycmoB0239
Cucsa.105240Lsi02G027310Bottle gourd (USVL1VR-Ls)cgylsiB133
Cucsa.105240Cp4.1LG17g05830Cucurbita pepo (Zucchini)cgycpeB0231
Cucsa.105240MELO3C023400.2Melon (DHL92) v3.6.1cgymedB133
Cucsa.105240CsaV3_7G032630Cucumber (Chinese Long) v3cgycucB131
Cucsa.105240Cla97C09G164840Watermelon (97103) v2cgywmbB141
Cucsa.105240Bhi09G000042Wax gourdcgywgoB162
Cucsa.105240Carg09569Silver-seed gourdcarcgyB1144
Cucsa.105240Carg18828Silver-seed gourdcarcgyB0837
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.105240Silver-seed gourdcarcgyB0152
Cucsa.105240Watermelon (97103) v2cgywmbB139
Cucsa.105240Cucurbita maxima (Rimu)cgycmaB0236
Cucsa.105240Cucurbita moschata (Rifu)cgycmoB0234
Cucsa.105240Watermelon (Charleston Gray)cgywcgB144
Cucsa.105240Cucurbita pepo (Zucchini)cgycpeB0229
Cucsa.105240Cucurbita pepo (Zucchini)cgycpeB0230
Cucsa.105240Cucurbita pepo (Zucchini)cgycpeB0232
Cucsa.105240Bottle gourd (USVL1VR-Ls)cgylsiB135