Cucsa.103370 (gene) Cucumber (Gy14) v1

NameCucsa.103370
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionPhytosulfokines 3, putative
Locationscaffold00927 : 2157774 .. 2158101 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTATGCTGCTCGCCCCACTCCCGCAGCCCCCACAACAATCCCGACTCAGGTAATTAAACTTATCTTAATATCATCTATTAGGTTTCGATAATAATTTAGTATGATATACAGCTTGCATATTTGTAGGGTGCATGGTGTTTTTAATAAAACAAATTTTAATGGTTGTTTATTTTGGCTCTGTAGGAGTTGGCCGAGGAATTAAAACAAAGTGATGGTGAGATGGTGATGGACGAGAATTGCGATGGAGTTGGCGAAGAAGAGTGCTTGATGAGACGAACTCTAGCTGCTCACTTAGATTATGTGTATACACAAAAGCATAAGCCATAG

mRNA sequence

CTTATGCTGCTCGCCCCACTCCCGCAGCCCCCACAACAATCCCGACTCAGGAGTTGGCCGAGGAATTAAAACAAAGTGATGGTGAGATGGTGATGGACGAGAATTGCGATGGAGTTGGCGAAGAAGAGTGCTTGATGAGACGAACTCTAGCTGCTCACTTAGATTATGTGTATACACAAAAGCATAAGCCATAG

Coding sequence (CDS)

CTTATGCTGCTCGCCCCACTCCCGCAGCCCCCACAACAATCCCGACTCAGGAGTTGGCCGAGGAATTAAAACAAAGTGATGGTGAGATGGTGATGGACGAGAATTGCGATGGAGTTGGCGAAGAAGAGTGCTTGATGAGACGAACTCTAGCTGCTCACTTAGATTATGTGTATACACAAAAGCATAAGCCATAG

Protein sequence

YAARPTPAAPTTIPTQELAEELKQSDGEMVMDENCDGVGEEECLMRRTLAAHLDYVYTQKHKP*
BLAST of Cucsa.103370 vs. Swiss-Prot
Match: PSK3_ARATH (Phytosulfokines 3 OS=Arabidopsis thaliana GN=PSK3 PE=2 SV=2)

HSP 1 Score: 71.6 bits (174), Expect = 3.4e-12
Identity = 31/63 (49.21%), Postives = 44/63 (69.84%), Query Frame = 1

Query: 1  YAARPTPAAPTTIPTQELAEELKQSDGEMVMDENCDGVGEEECLMRRTLAAHLDYVYTQK 60
          YAAR TP   T +  +   +E+   +G+ V +E+C+G+GEEECL+RR+L  H DY+YTQ 
Sbjct: 20 YAARLTPTTTTALSRENSVKEI---EGDKVEEESCNGIGEEECLIRRSLVLHTDYIYTQN 79

Query: 61 HKP 64
          HKP
Sbjct: 80 HKP 79

BLAST of Cucsa.103370 vs. Swiss-Prot
Match: PSK_ASPOF (Phytosulfokines OS=Asparagus officinalis GN=PSK PE=1 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 2.5e-10
Identity = 33/62 (53.23%), Postives = 39/62 (62.90%), Query Frame = 1

Query: 2  AARPTPAAPTTIPTQELAEELKQSDGEMVMDENCDGVGEEECLMRRTLAAHLDYVYTQKH 61
          AARP   A +T     + E+        V DE C+GVGEEECLMRRTL AH+DY+YTQ H
Sbjct: 22 AARPLQPADSTKSVHVIPEK--------VHDEACEGVGEEECLMRRTLTAHVDYIYTQDH 75

Query: 62 KP 64
           P
Sbjct: 82 NP 75

BLAST of Cucsa.103370 vs. Swiss-Prot
Match: PSK4_ARATH (Putative phytosulfokines 4 OS=Arabidopsis thaliana GN=PSK4 PE=3 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 3.9e-08
Identity = 30/63 (47.62%), Postives = 41/63 (65.08%), Query Frame = 1

Query: 2  AARPTPA---APTTIPTQELAEELKQSDGEMVMDENCDGVGEEECLMRRTLAAHLDYVYT 61
          +ARP PA   + TT P   L+ E+ +S    V  E+CD   +E+CL+RRTL AHLDY+YT
Sbjct: 22 SARPEPAYFASFTTSPADTLSLEMIESKLHEVAGESCDKEDDEDCLVRRTLTAHLDYIYT 81

BLAST of Cucsa.103370 vs. Swiss-Prot
Match: PSK2_ARATH (Phytosulfokines 2 OS=Arabidopsis thaliana GN=PSK2 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 8.8e-08
Identity = 35/66 (53.03%), Postives = 39/66 (59.09%), Query Frame = 1

Query: 3  ARPTPAAPTTIPT------QELAEELKQSDGEMVMDENCDGVGEEECLMRRTLAAHLDYV 62
          ARP PA   +I T       E   E K  D  MV DENC G  +E+CLMRRTL AH DY+
Sbjct: 22 ARPEPAISISITTAADPCNMEKKIEGKLDDMHMV-DENC-GADDEDCLMRRTLVAHTDYI 81

BLAST of Cucsa.103370 vs. Swiss-Prot
Match: PSK4_ORYSJ (Phytosulfokines 4 OS=Oryza sativa subsp. japonica GN=PSK4 PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 2.0e-07
Identity = 30/61 (49.18%), Postives = 36/61 (59.02%), Query Frame = 1

Query: 2  AARPTPAAPTTIPTQELAEELKQSDGEMVMDENC-DGVGEEECLMRRTLAAHLDYVYTQK 61
          A RPTP       T  L EE  Q+  +  +   C +G GEEECL RRTL AH DY+YTQ+
Sbjct: 28 AGRPTP-------TTSLDEEAAQAAAQSEIGGGCKEGEGEEECLARRTLTAHTDYIYTQQ 81

BLAST of Cucsa.103370 vs. TrEMBL
Match: A0A0A0KLK0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G495850 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 6.3e-29
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 1

Query: 1  YAARPTPAAPTTIPTQELAEELKQSDGEMVMDENCDGVGEEECLMRRTLAAHLDYVYTQK 60
          YAARPTPAAPTTIPTQELAEELKQSDGEMVMDENCDGVGEEECLMRRTLAAHLDYVYTQK
Sbjct: 24 YAARPTPAAPTTIPTQELAEELKQSDGEMVMDENCDGVGEEECLMRRTLAAHLDYVYTQK 83

Query: 61 HKP 64
          HKP
Sbjct: 84 HKP 86

BLAST of Cucsa.103370 vs. TrEMBL
Match: D7U6X7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s1328g00020 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 1.8e-12
Identity = 39/65 (60.00%), Postives = 49/65 (75.38%), Query Frame = 1

Query: 1  YAARPTPAAPTTIP--TQELAEELKQSDGEMVMDENCDGVGEEECLMRRTLAAHLDYVYT 60
          YAARP PA+P   P  TQ    E ++++   V+D NC+GVGE+ECLMRRTLAAH+DY+YT
Sbjct: 21 YAARPQPASPHDFPGKTQHGGVEAERAE---VVDGNCEGVGEDECLMRRTLAAHIDYIYT 80

Query: 61 QKHKP 64
          QK KP
Sbjct: 81 QKEKP 82

BLAST of Cucsa.103370 vs. TrEMBL
Match: A0A061FFM9_THECC (Phytosulfokines 3, putative OS=Theobroma cacao GN=TCM_034667 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 4.1e-12
Identity = 38/63 (60.32%), Postives = 46/63 (73.02%), Query Frame = 1

Query: 1  YAARPTPAAPTTIPTQELAEELKQSDGEMVMDENCDGVGEEECLMRRTLAAHLDYVYTQK 60
          YAARP PA P T      AE+++       +DENC+GVG+EECLMRRTLAAH+DY+YTQ 
Sbjct: 20 YAARPEPALPLTHHEGVEAEKVE-------IDENCEGVGKEECLMRRTLAAHVDYIYTQN 75

Query: 61 HKP 64
          HKP
Sbjct: 80 HKP 75

BLAST of Cucsa.103370 vs. TrEMBL
Match: B9SH34_RICCO (Phytosulfokines, putative OS=Ricinus communis GN=RCOM_0581720 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 7.0e-12
Identity = 34/64 (53.12%), Postives = 49/64 (76.56%), Query Frame = 1

Query: 1  YAARPTPAAPT-TIPTQELAEELKQSDGEMVMDENCDGVGEEECLMRRTLAAHLDYVYTQ 60
          +A+RP PA    ++P  +  + + Q +   +++E+C+GVGEEECLMRRTLAAH+DY+YTQ
Sbjct: 24 HASRPEPAFSNGSLPKNQQDQGVNQEEHAEMVEESCEGVGEEECLMRRTLAAHIDYIYTQ 83

Query: 61 KHKP 64
          KHKP
Sbjct: 84 KHKP 87

BLAST of Cucsa.103370 vs. TrEMBL
Match: B9HFY9_POPTR (Phytosulfokines 3 family protein OS=Populus trichocarpa GN=POPTR_0007s14750g PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 9.1e-12
Identity = 37/63 (58.73%), Postives = 44/63 (69.84%), Query Frame = 1

Query: 1  YAARPTPAAPTTIPTQELAEELKQSDGEMVMDENCDGVGEEECLMRRTLAAHLDYVYTQK 60
          YAARP P  P     +   + +     E VM+E+C+GVGEEECLMRRTLAAH DY+YTQK
Sbjct: 23 YAARPEPGFPNGSLAKNQQKVVDAEHAE-VMEESCEGVGEEECLMRRTLAAHTDYIYTQK 82

Query: 61 HKP 64
          HKP
Sbjct: 83 HKP 84

BLAST of Cucsa.103370 vs. TAIR10
Match: AT3G49780.1 (AT3G49780.1 phytosulfokine 4 precursor)

HSP 1 Score: 71.6 bits (174), Expect = 1.9e-13
Identity = 31/63 (49.21%), Postives = 44/63 (69.84%), Query Frame = 1

Query: 1  YAARPTPAAPTTIPTQELAEELKQSDGEMVMDENCDGVGEEECLMRRTLAAHLDYVYTQK 60
          YAAR TP   T +  +   +E+   +G+ V +E+C+G+GEEECL+RR+L  H DY+YTQ 
Sbjct: 20 YAARLTPTTTTALSRENSVKEI---EGDKVEEESCNGIGEEECLIRRSLVLHTDYIYTQN 79

Query: 61 HKP 64
          HKP
Sbjct: 80 HKP 79

BLAST of Cucsa.103370 vs. TAIR10
Match: AT4G37720.1 (AT4G37720.1 phytosulfokine 6 precursor)

HSP 1 Score: 58.2 bits (139), Expect = 2.2e-09
Identity = 30/63 (47.62%), Postives = 41/63 (65.08%), Query Frame = 1

Query: 2  AARPTPA---APTTIPTQELAEELKQSDGEMVMDENCDGVGEEECLMRRTLAAHLDYVYT 61
          +ARP PA   + TT P   L+ E+ +S    V  E+CD   +E+CL+RRTL AHLDY+YT
Sbjct: 22 SARPEPAYFASFTTSPADTLSLEMIESKLHEVAGESCDKEDDEDCLVRRTLTAHLDYIYT 81

BLAST of Cucsa.103370 vs. TAIR10
Match: AT2G22860.1 (AT2G22860.1 phytosulfokine 2 precursor)

HSP 1 Score: 57.0 bits (136), Expect = 4.9e-09
Identity = 35/66 (53.03%), Postives = 39/66 (59.09%), Query Frame = 1

Query: 3  ARPTPAAPTTIPT------QELAEELKQSDGEMVMDENCDGVGEEECLMRRTLAAHLDYV 62
          ARP PA   +I T       E   E K  D  MV DENC G  +E+CLMRRTL AH DY+
Sbjct: 22 ARPEPAISISITTAADPCNMEKKIEGKLDDMHMV-DENC-GADDEDCLMRRTLVAHTDYI 81

BLAST of Cucsa.103370 vs. TAIR10
Match: AT5G65870.1 (AT5G65870.1 phytosulfokine 5 precursor)

HSP 1 Score: 54.3 bits (129), Expect = 3.2e-08
Identity = 29/56 (51.79%), Postives = 40/56 (71.43%), Query Frame = 1

Query: 10 PTTI-PTQELAEELKQSDGEMVMDENCDGVGEEEC-LMRRTLAAHLDYVYTQKHKP 64
          PT++ P +   ++L+Q  GE++    C+GVGEEEC L+RRTL AH DY+YTQ H P
Sbjct: 28 PTSVYPEENSFKKLEQ--GEVI----CEGVGEEECFLIRRTLVAHTDYIYTQNHNP 77

BLAST of Cucsa.103370 vs. NCBI nr
Match: gi|700193427|gb|KGN48631.1| (hypothetical protein Csa_6G495850 [Cucumis sativus])

HSP 1 Score: 134.0 bits (336), Expect = 9.0e-29
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 1

Query: 1  YAARPTPAAPTTIPTQELAEELKQSDGEMVMDENCDGVGEEECLMRRTLAAHLDYVYTQK 60
          YAARPTPAAPTTIPTQELAEELKQSDGEMVMDENCDGVGEEECLMRRTLAAHLDYVYTQK
Sbjct: 24 YAARPTPAAPTTIPTQELAEELKQSDGEMVMDENCDGVGEEECLMRRTLAAHLDYVYTQK 83

Query: 61 HKP 64
          HKP
Sbjct: 84 HKP 86

BLAST of Cucsa.103370 vs. NCBI nr
Match: gi|659079751|ref|XP_008440424.1| (PREDICTED: phytosulfokines 3 [Cucumis melo])

HSP 1 Score: 112.8 bits (281), Expect = 2.2e-22
Identity = 55/63 (87.30%), Postives = 56/63 (88.89%), Query Frame = 1

Query: 1  YAARPTPAAPTTIPTQELAEELKQSDGEMVMDENCDGVGEEECLMRRTLAAHLDYVYTQK 60
          YAARP PAAPT IP+Q LA E KQSDGEM  DENCDGVGEEECLMRRTLAAHLDYVYTQK
Sbjct: 24 YAARPAPAAPTAIPSQGLAGESKQSDGEMT-DENCDGVGEEECLMRRTLAAHLDYVYTQK 83

Query: 61 HKP 64
          HKP
Sbjct: 84 HKP 85

BLAST of Cucsa.103370 vs. NCBI nr
Match: gi|225467412|ref|XP_002271337.1| (PREDICTED: phytosulfokines 3 [Vitis vinifera])

HSP 1 Score: 79.3 bits (194), Expect = 2.6e-12
Identity = 39/65 (60.00%), Postives = 49/65 (75.38%), Query Frame = 1

Query: 1  YAARPTPAAPTTIP--TQELAEELKQSDGEMVMDENCDGVGEEECLMRRTLAAHLDYVYT 60
          YAARP PA+P   P  TQ    E ++++   V+D NC+GVGE+ECLMRRTLAAH+DY+YT
Sbjct: 21 YAARPQPASPHDFPGKTQHGGVEAERAE---VVDGNCEGVGEDECLMRRTLAAHIDYIYT 80

Query: 61 QKHKP 64
          QK KP
Sbjct: 81 QKEKP 82

BLAST of Cucsa.103370 vs. NCBI nr
Match: gi|743862167|ref|XP_011031319.1| (PREDICTED: phytosulfokines 3-like [Populus euphratica])

HSP 1 Score: 79.0 bits (193), Expect = 3.4e-12
Identity = 38/63 (60.32%), Postives = 45/63 (71.43%), Query Frame = 1

Query: 1  YAARPTPAAPTTIPTQELAEELKQSDGEMVMDENCDGVGEEECLMRRTLAAHLDYVYTQK 60
          YAARP P  P    T+   + +     E VM+E+C+GVGEEECLMRRTLAAH DY+YTQK
Sbjct: 23 YAARPEPGFPNGSLTKNQQKVVDAEHAE-VMEESCEGVGEEECLMRRTLAAHTDYIYTQK 82

Query: 61 HKP 64
          HKP
Sbjct: 83 HKP 84

BLAST of Cucsa.103370 vs. NCBI nr
Match: gi|590596860|ref|XP_007018453.1| (Phytosulfokines 3 precursor, putative [Theobroma cacao])

HSP 1 Score: 78.2 bits (191), Expect = 5.9e-12
Identity = 38/63 (60.32%), Postives = 46/63 (73.02%), Query Frame = 1

Query: 1  YAARPTPAAPTTIPTQELAEELKQSDGEMVMDENCDGVGEEECLMRRTLAAHLDYVYTQK 60
          YAARP PA P T      AE+++       +DENC+GVG+EECLMRRTLAAH+DY+YTQ 
Sbjct: 20 YAARPEPALPLTHHEGVEAEKVE-------IDENCEGVGKEECLMRRTLAAHVDYIYTQN 75

Query: 61 HKP 64
          HKP
Sbjct: 80 HKP 75

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PSK3_ARATH3.4e-1249.21Phytosulfokines 3 OS=Arabidopsis thaliana GN=PSK3 PE=2 SV=2[more]
PSK_ASPOF2.5e-1053.23Phytosulfokines OS=Asparagus officinalis GN=PSK PE=1 SV=1[more]
PSK4_ARATH3.9e-0847.62Putative phytosulfokines 4 OS=Arabidopsis thaliana GN=PSK4 PE=3 SV=1[more]
PSK2_ARATH8.8e-0853.03Phytosulfokines 2 OS=Arabidopsis thaliana GN=PSK2 PE=2 SV=1[more]
PSK4_ORYSJ2.0e-0749.18Phytosulfokines 4 OS=Oryza sativa subsp. japonica GN=PSK4 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0KLK0_CUCSA6.3e-29100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G495850 PE=4 SV=1[more]
D7U6X7_VITVI1.8e-1260.00Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s1328g00020 PE=4 SV=... [more]
A0A061FFM9_THECC4.1e-1260.32Phytosulfokines 3, putative OS=Theobroma cacao GN=TCM_034667 PE=4 SV=1[more]
B9SH34_RICCO7.0e-1253.13Phytosulfokines, putative OS=Ricinus communis GN=RCOM_0581720 PE=4 SV=1[more]
B9HFY9_POPTR9.1e-1258.73Phytosulfokines 3 family protein OS=Populus trichocarpa GN=POPTR_0007s14750g PE=... [more]
Match NameE-valueIdentityDescription
AT3G49780.11.9e-1349.21 phytosulfokine 4 precursor[more]
AT4G37720.12.2e-0947.62 phytosulfokine 6 precursor[more]
AT2G22860.14.9e-0953.03 phytosulfokine 2 precursor[more]
AT5G65870.13.2e-0851.79 phytosulfokine 5 precursor[more]
Match NameE-valueIdentityDescription
gi|700193427|gb|KGN48631.1|9.0e-29100.00hypothetical protein Csa_6G495850 [Cucumis sativus][more]
gi|659079751|ref|XP_008440424.1|2.2e-2287.30PREDICTED: phytosulfokines 3 [Cucumis melo][more]
gi|225467412|ref|XP_002271337.1|2.6e-1260.00PREDICTED: phytosulfokines 3 [Vitis vinifera][more]
gi|743862167|ref|XP_011031319.1|3.4e-1260.32PREDICTED: phytosulfokines 3-like [Populus euphratica][more]
gi|590596860|ref|XP_007018453.1|5.9e-1260.32Phytosulfokines 3 precursor, putative [Theobroma cacao][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR009438Phytosulfokine
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: Molecular Function
TermDefinition
GO:0008083growth factor activity
Vocabulary: Biological Process
TermDefinition
GO:0008283cell proliferation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008283 cell proliferation
biological_process GO:0040007 growth
biological_process GO:0007165 signal transduction
cellular_component GO:0005576 extracellular region
molecular_function GO:0008083 growth factor activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.103370.1Cucsa.103370.1mRNA


Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009438PhytosulfokinePFAMPF06404PSKcoord: 16..62
score: 5.9
NoneNo IPR availablePANTHERPTHR33285FAMILY NOT NAMEDcoord: 1..63
score: 3.1
NoneNo IPR availablePANTHERPTHR33285:SF3PHYTOSULFOKINES 2-RELATEDcoord: 1..63
score: 3.1

The following gene(s) are paralogous to this gene:

None