Cucsa.085960 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.085960
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionPentatricopeptide repeat-containing protein
Locationscaffold00870 : 282105 .. 284731 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGACGAGTCTCGAGCTATGGCGCTTCTCTATCGCCTCCGTTCTGCTTTCCCTTCGAACTCGACTTATATCAACTATCGTCTTCACTACCGTTCTCTCTCCACAATCCTTTCTCCTGATTCCTCTAATCCCTTGTCAGCGAAACAGAAGTCCAGGGCTGCACTGTCCCTACTGAAAACGGAGGAAAATCCTGAGCGCATTATTGATATTTGCCGAGCTGCTAGTCTCACTCCAGAATTTCATCTCGATCGTATCGCTTTCTCTGTTGCCATTTCCAAGCTCTCAAAATTTAAGCATTTCGATGGGATTCGCCGGTTCCTCGAGGAATTGAAATCTCGTCCCGATTTGAAGAACGAGCGTTTTGCTTGCCACGCTATTGTTCTTTATGGCCAGGCTAATATGCTTGATCATGCTATTAGAACTTTCAAGCAAATTGATGAACTGGGTGTGCGTCATTCGGTTAAAACGCTAAATGCATTGCTATTTGCTTGTAATTTAGCTAAGGATTACAAGGAACTGAAACGGGTTTATATGGAGTTCCCTAAGATTTATGGAATCGAACCGGATATCGATACTTATAACAGAGTGATTAAGGCGTTTTCGGAGTCGGGTTCGTCGAGTTCAGTGTCTTCGATTGTGGCAGAGATGGACAGGAAGGATGTCAAACCAAATGCGACTACTTTTGCGAATTGGCTTGCTGGGTGCTACATGGAAGAGAAGTTTGAGGATGTTGAGAAGGTCCTAAATTTGATGGAGAAATATGGCGTGCGACGTGGAGTTGCTACATATAATGCAAGAATACGCAGTCTTTGCAAATTGAAGAGATCAACAGAAGCAAAAGCTTTATTTGATGGGATGTTATCCAGAGGTATGGATCCAAACTCTGTTACATATTGTGAATTGATTCATGGATTCTGTAAGGAAGGAAATCTAGATGAAGCTAAGAGCATTTTTAAAAGAATGATCAACAGCGGTTGCCAACCAGACAGTGAGTGCTATTTCACTTTGACTTACTTCCTTTGTCGAGGAGGAGATTATGAAACAGCATTCAAGATCTGTTTGGAGAGCATGAAGAAGGGGTGGGTTCCAAATTTCAGTACAATGAAGTCTCTTGTTGATGGGCTAGTTAGTATTTCGAAGGTCGAAGAGGCAAAGCAACTTATTGGGCAAATCAAAGAGAGGTTCTCAAAGAATGTTGAGAAGTGGAGTGAAATTGAAGCTGGATTACCTCAGTGAGGAAATTCTGGGATCCTGTGCAACTATCAATACCAAGTGAGTCTTGAGGAAAAACTAGAGAACGAGGAATTTTTTCTTGGCTTGAGCTAATCACTCTCTGCATATGTTTTACATTGATGCAGTTAATTGATTTGTCAGGAAGCTGTTATCAAAAAGCACTTTTTGTGACCCTTCTGAGAGGCTATGCTGAATTTCTACTGTCTTTTATGTTCTAGCTTTACCACTGGCTGAAATTTGTAATGCTGTAGTTGAATGAATTCTCTAACTATTGGTAGGCTCtGACCTGCTTCAAGAAGGGTGATAATGTGCTTGAAATGTTGTCGTTGACCTTCCTGTTAGGTTAGTAATTGCTGTATTGATGGAAGCTAGATTGTTTTGAGCAATTTTGTATGTCAATAAAGATGAAACTTAACATTGGATTTTATGCGTCTTCAGATTTAATCATATCTTTCTTGTTATAATTCAAAATATTCCCTCTGTGCGATGGTGAATTTGGATAGCAAGTAATTGCCTGATAAAATGCTTATGTTTCTTCTGCATGTCTTCAATTTTTTGATTTGCTACGAAAACAAATATACTTGGTGAACCATGTGTCCAAGAGAACTAATATTTTTAGAGAGAATGTTTCAAAATACAATAAAGTGCCACTAGGTAGTTTTTTTtAAACTAACGTAAATATATGTGAGATCCCGTACAACCCGTTGGGTTGTTTGTAGTGCCAGTTACAATTGTGTTTGCTCATTCTTGAATCTGAGGTGTATGGGGgAGGCAGGAAAGTGTAATGAAGATCACAAAATTGAAGAATTTCTTATATTTTTCACAACTATATTACATCTCTGCACTAATTCTTTTCCTCTCTCTTCTCTGTCTCATGGACCTGCAAGGAGAAACATCTGAAGAGCCACAGTTCTTCCATACAATTGAATATTTTCTCCTAAACTGGATTGTACCTTGATGATTGAAACTTGAAACAGCTAATTGGTTCCCTTTCTCTGTGGCTTGGAAATCCTAGGAAGTTCCTTCATAGAATTTGGAAACACAAACCATATAAAGCACCAGCAACATTGAACAACTCAAATTTAAGAAAAGCTGCCTTTTAGCTTCTCTTGCAGATCCTGACCTCATGATACATATTCTGAGGATTATGAAACATCCATCTGCATCTACATGTGCAAGCTATGGAAATCATTCTGAAGGATCGTATAACTCAACCCAGAAATCTTATTCATTCGATTGCTTCTCGAAGCATCAAAAGTCGAGCACATTTTTGTAACAAAGCGATTGCTGGTTAGCTTCGTCTTCCTTCGCCATGACATTAAAGATTGCCAGAAGGTGGGTGGTGAACTTCTACAGCCAGACGAAGCCATTTCAGGTCCTTGAGACCTCTGTGAGC

mRNA sequence

TGACGAGTCTCGAGCTATGGCGCTTCTCTATCGCCTCCGTTCTGCTTTCCCTTCGAACTCGACTTATATCAACTATCGTCTTCACTACCGTTCTCTCTCCACAATCCTTTCTCCTGATTCCTCTAATCCCTTGTCAGCGAAACAGAAGTCCAGGGCTGCACTGTCCCTACTGAAAACGGAGGAAAATCCTGAGCGCATTATTGATATTTGCCGAGCTGCTAGTCTCACTCCAGAATTTCATCTCGATCGTATCGCTTTCTCTGTTGCCATTTCCAAGCTCTCAAAATTTAAGCATTTCGATGGGATTCGCCGGTTCCTCGAGGAATTGAAATCTCGTCCCGATTTGAAGAACGAGCGTTTTGCTTGCCACGCTATTGTTCTTTATGGCCAGGCTAATATGCTTGATCATGCTATTAGAACTTTCAAGCAAATTGATGAACTGGGTGTGCGTCATTCGGTTAAAACGCTAAATGCATTGCTATTTGCTTGTAATTTAGCTAAGGATTACAAGGAACTGAAACGGGTTTATATGGAGTTCCCTAAGATTTATGGAATCGAACCGGATATCGATACTTATAACAGAGTGATTAAGGCGTTTTCGGAGTCGGGTTCGTCGAGTTCAGTGTCTTCGATTGTGGCAGAGATGGACAGGAAGGATGTCAAACCAAATGCGACTACTTTTGCGAATTGGCTTGCTGGGTGCTACATGGAAGAGAAGTTTGAGGATGTTGAGAAGGTCCTAAATTTGATGGAGAAATATGGCGTGCGACGTGGAGTTGCTACATATAATGCAAGAATACGCAGTCTTTGCAAATTGAAGAGATCAACAGAAGCAAAAGCTTTATTTGATGGGATGTTATCCAGAGGTATGGATCCAAACTCTGTTACATATTGTGAATTGATTCATGGATTCTGTAAGGAAGGAAATCTAGATGAAGCTAAGAGCATTTTTAAAAGAATGATCAACAGCGGTTGCCAACCAGACAGTGAGTGCTATTTCACTTTGACTTACTTCCTTTGTCGAGGAGGAGATTATGAAACAGCATTCAAGATCTGTTTGGAGAGCATGAAGAAGGGGTGGGTTCCAAATTTCAGTACAATGAAGTCTCTTGTTGATGGGCTAGTTAGTATTTCGAAGGTCGAAGAGGCAAAGCAACTTATTGGGCAAATCAAAGAGAGGTTCTCAAAGAATGTTGAGAAGTGGAGTGAAATTGAAGCTGGATTACCTCAGTGAGGAAATTCTGGGATCCTGTGCAACTATCAATACCAAGTGAGTCTTGAGGAAAAACTAGAGAACGAGGAATTTTTTCTTGGCTTGAGCTAATCACTCTCTGCATATGTTTTACATTGATGCAGTTAATTGATTTGTCAGGAAGCTGTTATCAAAAAGCACTTTTTGTGACCCTTCTGAGAGGCTATGCTGAATTTCTACTGTCTTTTATGTTCTAGCTTTACCACTGGCTGAAATTTGTAATGCTGTAGTTGAATGAATTCTCTAACTATTGGTAGGCTCTGACCTGCTTCAAGAAGGGTGATAATGTGCTTGAAATGTTGTCGTTGACCTTCCTGTTAGGTTAGTAATTGCTGTATTGATGGAAGCTAGATTGTTTTGAGCAATTTTGTATGTCAATAAAGATGAAACTTAACATTGGATTTTATGCGTCTTCAGATTTAATCATATCTTTCTTGTTATAATTCAAAATATTCCCTCTGTGCGATGGTGAATTTGGATAGCAAGTAATTGCCTGATAAAATGCTTATGTTTCTTCTGCATGTCTTCAATTTTTTGATTTGCTACGAAAACAAATATACTTGGTGAACCATGTGTCCAAgagaactaatatttttagagagaatgtttcaaaatacaataaagtgccactaggtAGTTTTTTTTAAACTAACGTAAATATATGTGAGATCCCGTACAACCCGTTGGGTTGTTTGTAGTGCCAGTTACAATTGTGTTTGCTCATTCTTGAATCTGAGGTGTATGGGGGAGGCAGGAAAGTGTAATGAAGATCACAAAATTGAAGAATTTCTTATATTTTTCACAACTATATTACATCTCTGCACTAATTCTTTTCCTCTCTCTTCTCTGTCTCATGGACCTGCAAGGAGAAACATCTGAAGAGCCACAGTTCTTCCATACAATTGAATATTTTCTCCTAAACTGGATTGTACCTTGATGATTGAAACTTGAAACAGCTAATTGGTTCCCTTTCTCTGTGGCTTGGAAATCCTAGGAAGTTCCTTCATAGAATTTGGAAACACAAACCATATAAAGCACCAGCAACATTGAACAACTCAAATTTAAGAAAAGCTGCCTTTTAGCTTCTCTTGCAGATCCTGACCTCATGATACATATTCTGAGGATTATGAAACATCCATCTGCATCTACATGTGCAAGCTATGGAAATCATTCTGAAGGATCGTATAACTCAACCCAGAAATCTTATTCATTCGATTGCTTCTCGAAGCATCAAAAGTCGAGCACATTTTTGTAACAAAGCGATTGCTGGTTAGCTTCGTCTTCCTTCGCCATGACATTAAAGATTGCCAGAAGGTGGGTGGTGAACTTCTACAGCCAGACGAAGCCATTTCAGGTCCTTGAGACCTCTGTGAGC

Coding sequence (CDS)

ATGGCGCTTCTCTATCGCCTCCGTTCTGCTTTCCCTTCGAACTCGACTTATATCAACTATCGTCTTCACTACCGTTCTCTCTCCACAATCCTTTCTCCTGATTCCTCTAATCCCTTGTCAGCGAAACAGAAGTCCAGGGCTGCACTGTCCCTACTGAAAACGGAGGAAAATCCTGAGCGCATTATTGATATTTGCCGAGCTGCTAGTCTCACTCCAGAATTTCATCTCGATCGTATCGCTTTCTCTGTTGCCATTTCCAAGCTCTCAAAATTTAAGCATTTCGATGGGATTCGCCGGTTCCTCGAGGAATTGAAATCTCGTCCCGATTTGAAGAACGAGCGTTTTGCTTGCCACGCTATTGTTCTTTATGGCCAGGCTAATATGCTTGATCATGCTATTAGAACTTTCAAGCAAATTGATGAACTGGGTGTGCGTCATTCGGTTAAAACGCTAAATGCATTGCTATTTGCTTGTAATTTAGCTAAGGATTACAAGGAACTGAAACGGGTTTATATGGAGTTCCCTAAGATTTATGGAATCGAACCGGATATCGATACTTATAACAGAGTGATTAAGGCGTTTTCGGAGTCGGGTTCGTCGAGTTCAGTGTCTTCGATTGTGGCAGAGATGGACAGGAAGGATGTCAAACCAAATGCGACTACTTTTGCGAATTGGCTTGCTGGGTGCTACATGGAAGAGAAGTTTGAGGATGTTGAGAAGGTCCTAAATTTGATGGAGAAATATGGCGTGCGACGTGGAGTTGCTACATATAATGCAAGAATACGCAGTCTTTGCAAATTGAAGAGATCAACAGAAGCAAAAGCTTTATTTGATGGGATGTTATCCAGAGGTATGGATCCAAACTCTGTTACATATTGTGAATTGATTCATGGATTCTGTAAGGAAGGAAATCTAGATGAAGCTAAGAGCATTTTTAAAAGAATGATCAACAGCGGTTGCCAACCAGACAGTGAGTGCTATTTCACTTTGACTTACTTCCTTTGTCGAGGAGGAGATTATGAAACAGCATTCAAGATCTGTTTGGAGAGCATGAAGAAGGGGTGGGTTCCAAATTTCAGTACAATGAAGTCTCTTGTTGATGGGCTAGTTAGTATTTCGAAGGTCGAAGAGGCAAAGCAACTTATTGGGCAAATCAAAGAGAGGTTCTCAAAGAATGTTGAGAAGTGGAGTGAAATTGAAGCTGGATTACCTCAGTGA

Protein sequence

MALLYRLRSAFPSNSTYINYRLHYRSLSTILSPDSSNPLSAKQKSRAALSLLKTEENPERIIDICRAASLTPEFHLDRIAFSVAISKLSKFKHFDGIRRFLEELKSRPDLKNERFACHAIVLYGQANMLDHAIRTFKQIDELGVRHSVKTLNALLFACNLAKDYKELKRVYMEFPKIYGIEPDIDTYNRVIKAFSESGSSSSVSSIVAEMDRKDVKPNATTFANWLAGCYMEEKFEDVEKVLNLMEKYGVRRGVATYNARIRSLCKLKRSTEAKALFDGMLSRGMDPNSVTYCELIHGFCKEGNLDEAKSIFKRMINSGCQPDSECYFTLTYFLCRGGDYETAFKICLESMKKGWVPNFSTMKSLVDGLVSISKVEEAKQLIGQIKERFSKNVEKWSEIEAGLPQ*
Homology
[Close]
BLAST of Cucsa.085960 vs. Swiss-Prot
Match: PPR87_ARATH (Pentatricopeptide repeat-containing protein At1g61870, mitochondrial OS=Arabidopsis thaliana GN=PPR336 PE=2 SV=2)

HSP 1 Score: 510.8 bits (1314), Expect = 1.4e-143
Identity = 251/409 (61.37%), Postives = 327/409 (79.95%), Query Frame = 1 

Query: 1   MALLYRLRSAFPSNSTYINYRLHYRSLS---TILSPDSSNPLSAKQKSRAALSLLKTEEN 60
           MALL R+RS+  S   ++N     RSLS   TILSPDS  PL++K+KS+AALSLLK+E++
Sbjct: 1   MALLSRIRSS-TSLFRHLNASPQIRSLSSASTILSPDSKTPLTSKEKSKAALSLLKSEKD 60

Query: 61  PERIIDICRAASLTPEFHLDRIAFSVAISKLSKFKHFDGIRRFLEE-LKSRPDLKNERFA 120
           P+RI++ICRAASLTP+  +DRIAFS A+  L++ KHF  +   L+  +++RPDLK+ERFA
Sbjct: 61  PDRILEICRAASLTPDCRIDRIAFSAAVENLAEKKHFSAVSNLLDGFIENRPDLKSERFA 120

Query: 121 CHAIVLYGQANMLDHAIRTFKQIDELGVRHSVKTLNALLFACNLAKDYKELKRVYMEFPK 180
            HAIVLY QANMLDH++R F+ +++  +  +VK+LNALLFAC +AKDYKE KRVY+E PK
Sbjct: 121 AHAIVLYAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPK 180

Query: 181 IYGIEPDIDTYNRVIKAFSESGSSSSVSSIVAEMDRKDVKPNATTFANWLAGCYMEEKFE 240
           +YGIEPD++TYNR+IK F ESGS+SS  SIVAEM+RK +KPN+++F   ++G Y E+K +
Sbjct: 181 MYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSD 240

Query: 241 DVEKVLNLMEKYGVRRGVATYNARIRSLCKLKRSTEAKALFDGMLSRGMDPNSVTYCELI 300
           +V KVL +M+  GV  GV+TYN RI+SLCK K+S EAKAL DGMLS GM PN+VTY  LI
Sbjct: 241 EVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLI 300

Query: 301 HGFCKEGNLDEAKSIFKRMINSGCQPDSECYFTLTYFLCRGGDYETAFKICLESMKKGWV 360
           HGFC E + +EAK +FK M+N GC+PDSECYFTL Y+LC+GGD+ETA  +C ESM+K WV
Sbjct: 301 HGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWV 360

Query: 361 PNFSTMKSLVDGLVSISKVEEAKQLIGQIKERFSKNVEKWSEIEAGLPQ 406
           P+FS MKSLV+GL   SKVEEAK+LIGQ+KE+F++NVE W+E+EA LPQ
Sbjct: 361 PSFSIMKSLVNGLAKDSKVEEAKELIGQVKEKFTRNVELWNEVEAALPQ 408

[Close]
BLAST of Cucsa.085960 vs. Swiss-Prot
Match: PPR33_ARATH (Pentatricopeptide repeat-containing protein At1g11630, mitochondrial OS=Arabidopsis thaliana GN=At1g11630 PE=2 SV=1)

HSP 1 Score: 441.8 bits (1135), Expect = 8.0e-123
Identity = 220/406 (54.19%), Postives = 306/406 (75.37%), Query Frame = 1 

Query: 1   MALLYRLRSAFPSNSTYINYRLHYRSLSTILSPDSSNPLSAKQK-SRAALSLLKTEENPE 60
           MA L+R+R++       +     +R  S+  S  +   L++KQK SR  LSLLK+E NP+
Sbjct: 1   MAFLFRIRTS----EFILQKATQFRLKSSSSSIFTLKSLTSKQKKSRDTLSLLKSENNPD 60

Query: 61  RIIDICRAASLTPEFHLDRIAFSVAISKLSKFKHFDGIRRFLEE-LKSRPDLKNERFACH 120
           RI++ICR+ SL+P++H+DRI FSVA+  L++ KHF  + + L+  ++++PD K+E FA  
Sbjct: 61  RILEICRSTSLSPDYHVDRIIFSVAVVTLAREKHFVAVSQLLDGFIQNQPDPKSESFAVR 120

Query: 121 AIVLYGQANMLDHAIRTFKQIDELGVRHSVKTLNALLFACNLAKDYKELKRVYMEFPKIY 180
           AI+LYG+ANMLD +I+TF+ +++  +  +VK+LNALLFAC +AKDYKE  RVY+E PK+Y
Sbjct: 121 AIILYGRANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMY 180

Query: 181 GIEPDIDTYNRVIKAFSESGSSSSVSSIVAEMDRKDVKPNATTFANWLAGCYMEEKFEDV 240
           GIEPD++TYNR+I+   ESGS+SS  SIVAEM+RK +KP A +F   + G Y EEKF++V
Sbjct: 181 GIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEV 240

Query: 241 EKVLNLMEKYGVRRGVATYNARIRSLCKLKRSTEAKALFDGMLSRGMDPNSVTYCELIHG 300
            KV+ +M+++GV  GVATYN  I+ LCK K+S EAKAL DG++S  M PNSVTY  LIHG
Sbjct: 241 RKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHG 300

Query: 301 FCKEGNLDEAKSIFKRMINSGCQPDSECYFTLTYFLCRGGDYETAFKICLESMKKGWVPN 360
           FC E NLDEA ++F+ M+ +G +PDSECYFTL + LC+GGD+ETA  +C ESM+K WVP+
Sbjct: 301 FCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPS 360

Query: 361 FSTMKSLVDGLVSISKVEEAKQLIGQIKERFSKNVEKWSEIEAGLP 405
           FS MK LV+GL S SKV+EAK+LI  +KE+F++NV+ W+E+EA LP
Sbjct: 361 FSVMKWLVNGLASRSKVDEAKELIAVVKEKFTRNVDLWNEVEAALP 402

[Close]
BLAST of Cucsa.085960 vs. Swiss-Prot
Match: PP352_ARATH (Pentatricopeptide repeat-containing protein At4g36680, mitochondrial OS=Arabidopsis thaliana GN=At4g36680 PE=2 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 7.7e-49
Identity = 122/392 (31.12%), Postives = 207/392 (52.81%), Query Frame = 1 

Query: 15  STYINYRLHYRSLSTILSPDSSNPLSAKQKSRAALSLLKTEENPERIIDI-CRAASLTPE 74
           S+ I+ RL  R  S      ++ P S K     A S L+ E +P++ + I    +  +  
Sbjct: 3   SSRISLRLVRRFASAAADGTTTAPSSGKISVSKAKSTLRKEHDPDKALKIYANVSDHSAS 62

Query: 75  FHLDRIAFSVAISKLSKFKHFDGIRRFLEELKSRPDLKNERFACHAIVLYGQANMLDHAI 134
               R A  + + +L+K + F  I   +E  K+ P +K E F    I  YGQA+M +HA+
Sbjct: 63  PVSSRYAQELTVRRLAKCRRFSDIETLIESHKNDPKIKEEPFYSTLIRSYGQASMFNHAM 122

Query: 135 RTFKQIDELGVRHSVKTLNALLFACNLAKDYKELKRVYMEFPKIYG-IEPDIDTYNRVIK 194
           RTF+Q+D+ G   S  + NALL AC  +K++ ++ +++ E P+ Y  I PD  +Y  +IK
Sbjct: 123 RTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIK 182

Query: 195 AFSESGSSSSVSSIVAEMDRKDVKPNATTFANWLAGCYMEEKFEDVEKVLNLMEKYGVRR 254
           ++ +SG+      I+ +M  K ++     F   L+  Y + + E  + + N M K G   
Sbjct: 183 SYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCEL 242

Query: 255 GVATYNARIRSLCKLKRSTEAKALFDGMLSRGMDPNSVTYCELIHGFCKEGNLDEAKSIF 314
             A YN RI S  K +     K L + M S G+ P++++Y  L+  +C+ G LDEAK ++
Sbjct: 243 DNAAYNVRIMSAQK-ESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVY 302

Query: 315 KRMINSGCQPDSECYFTLTYFLCRGGDYETAFKICLESMKKGWVPNFSTMKSLVDGLVSI 374
           + +  + C P++  + TL + LC    YE  + I  +S+    +P+F+T+K LV GLV  
Sbjct: 303 EGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVGLVEN 362

Query: 375 SKVEEAKQLIGQIKERFSKN-VEKWSEIEAGL 404
            K ++AK LI  +K++F  + +  W ++E  L
Sbjct: 363 KKRDDAKGLIRTVKKKFPPSFLNAWKKLEEEL 393

[Close]
BLAST of Cucsa.085960 vs. Swiss-Prot
Match: PPR82_ARATH (Pentatricopeptide repeat-containing protein At1g55890, mitochondrial OS=Arabidopsis thaliana GN=At1g55890 PE=2 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 6.5e-48
Identity = 107/359 (29.81%), Postives = 193/359 (53.76%), Query Frame = 1 

Query: 24  YRSLSTILSPDSSNPLSAKQKSRAALSLLKTEENPERIIDICRAASLTPEFHLDRIAFSV 83
           + S +T++S  ++   +     ++  SL+  E NP+RI++  + A  +  F  +   +  
Sbjct: 20  FSSAATVVSEPTAVTAAISPPQKSLTSLVNGERNPKRIVEKFKKACESERFRTNIAVYDR 79

Query: 84  AISKLSKFKHFDGIRRFLEELKSRPDLKNERFACHAIVLYGQANMLDHAIRTFKQIDELG 143
            + +L   K    +   LEE K   D+  E FA   I LYG+A M ++A + F+++    
Sbjct: 80  TVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFEEMPNRD 139

Query: 144 VRHSVKTLNALLFACNLAKDYKELKRVYMEFPKIYGIEPDIDTYNRVIKAFSESGSSSSV 203
            + SV + NALL A  L+K +  ++ ++ E P    I+PDI +YN +IKA  E  S    
Sbjct: 140 CKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEA 199

Query: 204 SSIVAEMDRKDVKPNATTFANWLAGCYMEEKFEDVEKVLNLMEKYGVRRGVATYNARIRS 263
            +++ E++ K +KP+  TF   L   Y++ +FE  E++   M +  V   + TYNAR+  
Sbjct: 200 VALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLG 259

Query: 264 LCKLKRSTEAKALFDGMLSRGMDPNSVTYCELIHGFCKEGNLDEAKSIFKRMINSGCQPD 323
           L    +S E   LF  + + G+ P+  ++  +I G   EG +DEA++ +K ++  G +PD
Sbjct: 260 LANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPD 319

Query: 324 SECYFTLTYFLCRGGDYETAFKICLESMKKGWVPNFSTMKSLVDGLVSISKVEEAKQLI 383
              +  L   +C+ GD+E+A ++  E+  K ++   +T++ LVD LV  SK EEA++++
Sbjct: 320 KATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEEIV 378

[Close]
BLAST of Cucsa.085960 vs. Swiss-Prot
Match: PP226_ARATH (Pentatricopeptide repeat-containing protein At3g13160, mitochondrial OS=Arabidopsis thaliana GN=At3g13160 PE=2 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 2.1e-46
Identity = 109/378 (28.84%), Postives = 196/378 (51.85%), Query Frame = 1 

Query: 5   YRLRSAFPSNSTYINYRLHYRSLSTILSPDSSNPLSAKQKSRAALSLLKTEENPERIIDI 64
           + LR  F S ST+ N R      +   +P    P        + ++L+  E +P+ I + 
Sbjct: 7   FLLRGNF-SFSTHTNRRFFSAVTAAAATPSPPKP--------SLITLVNDERDPKFITEK 66

Query: 65  CRAASLTPEFHLDRIAFSVAISKLSKFKHFDGIRRFLEELKSRPDLKNERFACHAIVLYG 124
            + A     F  +   +   + +L+  K F+ +   LEE    P++  E F    I LYG
Sbjct: 67  FKKACQAEWFRKNIAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYG 126

Query: 125 QANMLDHAIRTFKQIDELGVRHSVKTLNALLFACNLAKDYKELKRVYMEFPKIYGIEPDI 184
           +  M ++A + F ++ E   + +  + NALL AC  +K +  ++ ++ E P    IEPD+
Sbjct: 127 RVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDV 186

Query: 185 DTYNRVIKAFSESGSSSSVSSIVAEMDRKDVKPNATTFANWLAGCYMEEKFEDVEKVLNL 244
            +YN +IK     GS +   +++ E++ K +KP+  TF   L   Y + KFE+ E++   
Sbjct: 187 ASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWAR 246

Query: 245 MEKYGVRRGVATYNARIRSLCKLKRSTEAKALFDGMLSRGMDPNSVTYCELIHGFCKEGN 304
           M +  V+R + +YNAR+  L    +S E  +LFD +    + P+  T+  +I GF  EG 
Sbjct: 247 MVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGK 306

Query: 305 LDEAKSIFKRMINSGCQPDSECYFTLTYFLCRGGDYETAFKICLESMKKGWVPNFSTMKS 364
           LDEA + +K +  +GC+P    + +L   +C+ GD E+A+++C E   K  + + + ++ 
Sbjct: 307 LDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQE 366

Query: 365 LVDGLVSISKVEEAKQLI 383
           +VD LV  SK +EA++++
Sbjct: 367 VVDALVKGSKQDEAEEIV 375

[Close]
BLAST of Cucsa.085960 vs. TrEMBL
Match: A0A0A0LRL9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G063590 PE=4 SV=1)

HSP 1 Score: 810.1 bits (2091), Expect = 1.3e-231
Identity = 405/405 (100.00%), Postives = 405/405 (100.00%), Query Frame = 1 

Query: 1   MALLYRLRSAFPSNSTYINYRLHYRSLSTILSPDSSNPLSAKQKSRAALSLLKTEENPER 60
           MALLYRLRSAFPSNSTYINYRLHYRSLSTILSPDSSNPLSAKQKSRAALSLLKTEENPER
Sbjct: 1   MALLYRLRSAFPSNSTYINYRLHYRSLSTILSPDSSNPLSAKQKSRAALSLLKTEENPER 60

Query: 61  IIDICRAASLTPEFHLDRIAFSVAISKLSKFKHFDGIRRFLEELKSRPDLKNERFACHAI 120
           IIDICRAASLTPEFHLDRIAFSVAISKLSKFKHFDGIRRFLEELKSRPDLKNERFACHAI
Sbjct: 61  IIDICRAASLTPEFHLDRIAFSVAISKLSKFKHFDGIRRFLEELKSRPDLKNERFACHAI 120

Query: 121 VLYGQANMLDHAIRTFKQIDELGVRHSVKTLNALLFACNLAKDYKELKRVYMEFPKIYGI 180
           VLYGQANMLDHAIRTFKQIDELGVRHSVKTLNALLFACNLAKDYKELKRVYMEFPKIYGI
Sbjct: 121 VLYGQANMLDHAIRTFKQIDELGVRHSVKTLNALLFACNLAKDYKELKRVYMEFPKIYGI 180

Query: 181 EPDIDTYNRVIKAFSESGSSSSVSSIVAEMDRKDVKPNATTFANWLAGCYMEEKFEDVEK 240
           EPDIDTYNRVIKAFSESGSSSSVSSIVAEMDRKDVKPNATTFANWLAGCYMEEKFEDVEK
Sbjct: 181 EPDIDTYNRVIKAFSESGSSSSVSSIVAEMDRKDVKPNATTFANWLAGCYMEEKFEDVEK 240

Query: 241 VLNLMEKYGVRRGVATYNARIRSLCKLKRSTEAKALFDGMLSRGMDPNSVTYCELIHGFC 300
           VLNLMEKYGVRRGVATYNARIRSLCKLKRSTEAKALFDGMLSRGMDPNSVTYCELIHGFC
Sbjct: 241 VLNLMEKYGVRRGVATYNARIRSLCKLKRSTEAKALFDGMLSRGMDPNSVTYCELIHGFC 300

Query: 301 KEGNLDEAKSIFKRMINSGCQPDSECYFTLTYFLCRGGDYETAFKICLESMKKGWVPNFS 360
           KEGNLDEAKSIFKRMINSGCQPDSECYFTLTYFLCRGGDYETAFKICLESMKKGWVPNFS
Sbjct: 301 KEGNLDEAKSIFKRMINSGCQPDSECYFTLTYFLCRGGDYETAFKICLESMKKGWVPNFS 360

Query: 361 TMKSLVDGLVSISKVEEAKQLIGQIKERFSKNVEKWSEIEAGLPQ 406
           TMKSLVDGLVSISKVEEAKQLIGQIKERFSKNVEKWSEIEAGLPQ
Sbjct: 361 TMKSLVDGLVSISKVEEAKQLIGQIKERFSKNVEKWSEIEAGLPQ 405

[Close]
BLAST of Cucsa.085960 vs. TrEMBL
Match: F6HRE2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0116g00030 PE=4 SV=1)

HSP 1 Score: 550.8 bits (1418), Expect = 1.4e-153
Identity = 265/381 (69.55%), Postives = 329/381 (86.35%), Query Frame = 1 

Query: 25  RSLSTILSPDSSNPLSAKQKSRAALSLLKTEENPERIIDICRAASLTPEFHLDRIAFSVA 84
           R  S+ILSPDS+ PLS+K+KSRAALSLLK+E++P+RI++ICRAA+LTPE HLDR+AFSVA
Sbjct: 16  RFFSSILSPDSATPLSSKEKSRAALSLLKSEQDPQRILEICRAAALTPESHLDRVAFSVA 75

Query: 85  ISKLSKFKHFDGIRRFLEELKSRPDLKNERFACHAIVLYGQANMLDHAIRTFKQIDELGV 144
           ISKL+  KHFD IR FL+ELK+RPDL+ ERF  HAIVL+GQA ML+ A+RTF+Q+ +LGV
Sbjct: 76  ISKLADSKHFDSIRHFLDELKARPDLRTERFVSHAIVLFGQAGMLNDAVRTFEQMHQLGV 135

Query: 145 RHSVKTLNALLFACNLAKDYKELKRVYMEFPKIYGIEPDIDTYNRVIKAFSESGSSSSVS 204
             +V++LNALLF+C LAK+YKE  R+++EFPK YGIE ++D+YN V+KAFSESGSSSS  
Sbjct: 136 DRTVRSLNALLFSCILAKNYKEANRIFLEFPKTYGIELNLDSYNTVLKAFSESGSSSSGY 195

Query: 205 SIVAEMDRKDVKPNATTFANWLAGCYMEEKFEDVEKVLNLMEKYGVRRGVATYNARIRSL 264
           SI+AEM RK VKPNAT+F   LAG Y EEK+EDV KVL +ME+Y ++ G++TYN RI+SL
Sbjct: 196 SILAEMGRKGVKPNATSFGILLAGFYNEEKYEDVGKVLKMMEEYKMQPGISTYNIRIQSL 255

Query: 265 CKLKRSTEAKALFDGMLSRGMDPNSVTYCELIHGFCKEGNLDEAKSIFKRMINSGCQPDS 324
           CKLK+S+EAKAL DG+L+R M PNS TYC LIHGFCKEGNLDEAK +FK M+N GC+PDS
Sbjct: 256 CKLKKSSEAKALLDGILARRMKPNSETYCHLIHGFCKEGNLDEAKKLFKDMVNRGCKPDS 315

Query: 325 ECYFTLTYFLCRGGDYETAFKICLESMKKGWVPNFSTMKSLVDGLVSISKVEEAKQLIGQ 384
           +CYFTL YFLC+GGD+E+A + C E M+KGW PN STM SLV+GLVSISKVEEA++LIGQ
Sbjct: 316 DCYFTLVYFLCQGGDFESALRFCKECMEKGWFPNISTMTSLVNGLVSISKVEEARELIGQ 375

Query: 385 IKERFSKNVEKWSEIEAGLPQ 406
           IKE+FS+NV+KW+EIEAGLPQ
Sbjct: 376 IKEKFSRNVDKWNEIEAGLPQ 396

[Close]
BLAST of Cucsa.085960 vs. TrEMBL
Match: A5AGX1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027645 PE=4 SV=1)

HSP 1 Score: 550.4 bits (1417), Expect = 1.8e-153
Identity = 265/381 (69.55%), Postives = 329/381 (86.35%), Query Frame = 1 

Query: 25  RSLSTILSPDSSNPLSAKQKSRAALSLLKTEENPERIIDICRAASLTPEFHLDRIAFSVA 84
           R  S+ILSPDS+ PLS+K+KSRAALSLLK+E++P+RI++ICRAA+LTPE HLDR+AFSVA
Sbjct: 16  RFFSSILSPDSATPLSSKEKSRAALSLLKSEQDPQRILEICRAAALTPESHLDRVAFSVA 75

Query: 85  ISKLSKFKHFDGIRRFLEELKSRPDLKNERFACHAIVLYGQANMLDHAIRTFKQIDELGV 144
           ISKL+  KHFD IR FL+ELK+RPDL+ ERF  HAIVL+GQA ML+ A+RTF+Q+ +LGV
Sbjct: 76  ISKLADSKHFDSIRHFLDELKARPDLRTERFVSHAIVLFGQAGMLNDAVRTFEQMHQLGV 135

Query: 145 RHSVKTLNALLFACNLAKDYKELKRVYMEFPKIYGIEPDIDTYNRVIKAFSESGSSSSVS 204
             +V++LNALLF+C LAK+YKE  R+++EFPK YGIE ++D+YN V+KAFSESGSSSS  
Sbjct: 136 DRTVRSLNALLFSCILAKNYKEANRIFLEFPKTYGIELNLDSYNTVLKAFSESGSSSSGY 195

Query: 205 SIVAEMDRKDVKPNATTFANWLAGCYMEEKFEDVEKVLNLMEKYGVRRGVATYNARIRSL 264
           SI+AEM RK VKPNAT+F   LAG Y EEK+EDV KVL +ME+Y ++ G++TYN RI+SL
Sbjct: 196 SILAEMGRKGVKPNATSFGILLAGFYNEEKYEDVGKVLKMMEEYKMQPGISTYNIRIQSL 255

Query: 265 CKLKRSTEAKALFDGMLSRGMDPNSVTYCELIHGFCKEGNLDEAKSIFKRMINSGCQPDS 324
           CKLK+S+EAKAL DG+L+R M PNS TYC LIHGFCKEGNLDEAK +FK M+N GC+PDS
Sbjct: 256 CKLKKSSEAKALLDGILARRMKPNSETYCHLIHGFCKEGNLDEAKKLFKDMVNRGCKPDS 315

Query: 325 ECYFTLTYFLCRGGDYETAFKICLESMKKGWVPNFSTMKSLVDGLVSISKVEEAKQLIGQ 384
           +CYFTL YFLC+GGD+E+A + C E M+KGW PN STM SLV+GLVSISKVEEA++LIGQ
Sbjct: 316 DCYFTLVYFLCQGGDFESALRFCKECMEKGWFPNISTMTSLVNGLVSISKVEEAQELIGQ 375

Query: 385 IKERFSKNVEKWSEIEAGLPQ 406
           IKE+FS+NV+KW+EIEAGLPQ
Sbjct: 376 IKEKFSRNVDKWNEIEAGLPQ 396

[Close]
BLAST of Cucsa.085960 vs. TrEMBL
Match: A0A059CAY2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E04079 PE=4 SV=1)

HSP 1 Score: 548.1 bits (1411), Expect = 8.9e-153
Identity = 264/380 (69.47%), Postives = 319/380 (83.95%), Query Frame = 1 

Query: 26  SLSTILSPDSSNPLSAKQKSRAALSLLKTEENPERIIDICRAASLTPEFHLDRIAFSVAI 85
           S S+ILSPDSS PLS+K+K+RAALSLLK E+NPERIIDICRAASLTP+ HLDR+AFSVAI
Sbjct: 27  SPSSILSPDSSAPLSSKEKTRAALSLLKAEKNPERIIDICRAASLTPQSHLDRVAFSVAI 86

Query: 86  SKLSKFKHFDGIRRFLEELKSRPDLKNERFACHAIVLYGQANMLDHAIRTFKQIDELGVR 145
           SKL++  +FDGIRRFLEE K RPDL+NERF CHAIVLYGQA ML+ AI TFK ++ELG+R
Sbjct: 87  SKLTESSYFDGIRRFLEESKGRPDLRNERFMCHAIVLYGQAGMLNEAIDTFKHVEELGIR 146

Query: 146 HSVKTLNALLFACNLAKDYKELKRVYMEFPKIYGIEPDIDTYNRVIKAFSESGSSSSVSS 205
            +VK+LNALLFA  +AKD+KE KR++MEFP+IY + PD++T+N VIKAFSES S+SS  S
Sbjct: 147 RTVKSLNALLFASIVAKDFKETKRIFMEFPRIYSVAPDLETFNTVIKAFSESESTSSAYS 206

Query: 206 IVAEMDRKDVKPNATTFANWLAGCYMEEKFEDVEKVLNLMEKYGVRRGVATYNARIRSLC 265
            +AEMDRK VKPNATTF   LAG Y EEK+EDV KVL LM+KYGV RGV+ YN RI SLC
Sbjct: 207 ALAEMDRKGVKPNATTFGTMLAGFYKEEKYEDVGKVLELMQKYGVARGVSIYNIRIHSLC 266

Query: 266 KLKRSTEAKALFDGMLSRGMDPNSVTYCELIHGFCKEGNLDEAKSIFKRMINSGCQPDSE 325
           KL++S EAK L DGML+RGM PNS TY  LIHGFC E   DEAK +FK M+N GC+P S+
Sbjct: 267 KLRKSDEAKVLLDGMLARGMKPNSETYAHLIHGFCSEERYDEAKKMFKSMMNHGCRPTSD 326

Query: 326 CYFTLTYFLCRGGDYETAFKICLESMKKGWVPNFSTMKSLVDGLVSISKVEEAKQLIGQI 385
           CYFT  ++LC+GG+++TA +IC ESM+KGW+PNF TMKSLV+GLVSI KV+EA++LI Q+
Sbjct: 327 CYFTFIHYLCKGGEFDTALQICKESMEKGWIPNFGTMKSLVNGLVSIDKVDEARELIKQV 386

Query: 386 KERFSKNVEKWSEIEAGLPQ 406
           KERFS+N + W E+EAGLPQ
Sbjct: 387 KERFSRNTDLWDEVEAGLPQ 406

[Close]
BLAST of Cucsa.085960 vs. TrEMBL
Match: A0A067JLA1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21241 PE=4 SV=1)

HSP 1 Score: 532.7 bits (1371), Expect = 3.9e-148
Identity = 276/411 (67.15%), Postives = 328/411 (79.81%), Query Frame = 1 

Query: 1   MALLYRLRSAFPSNSTYINYRLHYRSLSTILSPDSSNPLSAKQKSRAALSLLKTEENPER 60
           MAL  RLR         ++   + R  STILSPDS  PLS+K+K+RAALSLLK E NPE+
Sbjct: 1   MALFSRLR--------ILSLTRNQRHFSTILSPDSKTPLSSKEKTRAALSLLKVENNPEK 60

Query: 61  IIDICRAASLTPEFHLDRIAFSVAISKLSKFKHFDGIRRFLEELKS-RPDLKN-ERFACH 120
           I++IC+AASLTPE HLDRI FS AISKLSK  +F  IR+FL++++S RPDL++ +RFA H
Sbjct: 61  IVEICKAASLTPETHLDRIVFSEAISKLSKSNNFSYIRQFLDDVRSSRPDLRSSQRFAAH 120

Query: 121 AIVLYGQANMLDHAIRTFKQI--DELGVR-HSVKTLNALLFACNLAKDYKELKRVYMEFP 180
           AIVLYGQANM+D AIRTFK+   D +G    SVK LNALLFAC LAK+Y E+ R+Y+EFP
Sbjct: 121 AIVLYGQANMIDDAIRTFKEYHTDVIGSGIGSVKALNALLFACILAKNYSEVNRIYLEFP 180

Query: 181 KIYGIEPDIDTYNRVIKAFSESGSSSSVSSIVAEMDRKDVKPNATTFANWLAGCYMEEKF 240
           KIY IEP+ DTYN VIKAF ESGSSSS  S++AEM+RK VKPNATTF N LAG Y EEKF
Sbjct: 181 KIYNIEPNYDTYNTVIKAFCESGSSSSGYSVLAEMNRKGVKPNATTFGNLLAGFYKEEKF 240

Query: 241 EDVEKVLNLM-EKYGVRRGVATYNARIRSLCKLKRSTEAKALFDGMLSRGMDPNSVTYCE 300
           EDV KVL +M +KYG+R GV+TYN RI+SLCKLKR+TEAKAL DGMLSR ++PNSVTYC 
Sbjct: 241 EDVGKVLEIMKQKYGIRPGVSTYNTRIQSLCKLKRATEAKALLDGMLSRKIEPNSVTYCH 300

Query: 301 LIHGFCKEGNLDEAKSIFKRMINSGCQPDSECYFTLTYFLCRGGDYETAFKICLESMKKG 360
           LIHGFC EGNL+EAK +FK M+N GCQPDSECYFTL Y+LC+GGD+ETA  IC ES+ KG
Sbjct: 301 LIHGFCSEGNLEEAKRLFKSMVNHGCQPDSECYFTLLYYLCKGGDFETALTICKESIGKG 360

Query: 361 WVPNFSTMKSLVDGLVSISKVEEAKQLIGQIKERFSKNVEKWSEIEAGLPQ 406
           WVP F  MKSLV+GL  + KVEEAK L+ Q+K+RF+KNV+ W EIEAGL Q
Sbjct: 361 WVPYFGIMKSLVNGLAGVGKVEEAKGLVAQMKKRFTKNVQLWDEIEAGLAQ 403

[Close]
BLAST of Cucsa.085960 vs. TAIR10
Match: AT1G61870.1 (AT1G61870.1 pentatricopeptide repeat 336)

HSP 1 Score: 510.8 bits (1314), Expect = 7.9e-145
Identity = 251/409 (61.37%), Postives = 327/409 (79.95%), Query Frame = 1 

Query: 1   MALLYRLRSAFPSNSTYINYRLHYRSLS---TILSPDSSNPLSAKQKSRAALSLLKTEEN 60
           MALL R+RS+  S   ++N     RSLS   TILSPDS  PL++K+KS+AALSLLK+E++
Sbjct: 1   MALLSRIRSS-TSLFRHLNASPQIRSLSSASTILSPDSKTPLTSKEKSKAALSLLKSEKD 60

Query: 61  PERIIDICRAASLTPEFHLDRIAFSVAISKLSKFKHFDGIRRFLEE-LKSRPDLKNERFA 120
           P+RI++ICRAASLTP+  +DRIAFS A+  L++ KHF  +   L+  +++RPDLK+ERFA
Sbjct: 61  PDRILEICRAASLTPDCRIDRIAFSAAVENLAEKKHFSAVSNLLDGFIENRPDLKSERFA 120

Query: 121 CHAIVLYGQANMLDHAIRTFKQIDELGVRHSVKTLNALLFACNLAKDYKELKRVYMEFPK 180
            HAIVLY QANMLDH++R F+ +++  +  +VK+LNALLFAC +AKDYKE KRVY+E PK
Sbjct: 121 AHAIVLYAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPK 180

Query: 181 IYGIEPDIDTYNRVIKAFSESGSSSSVSSIVAEMDRKDVKPNATTFANWLAGCYMEEKFE 240
           +YGIEPD++TYNR+IK F ESGS+SS  SIVAEM+RK +KPN+++F   ++G Y E+K +
Sbjct: 181 MYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSD 240

Query: 241 DVEKVLNLMEKYGVRRGVATYNARIRSLCKLKRSTEAKALFDGMLSRGMDPNSVTYCELI 300
           +V KVL +M+  GV  GV+TYN RI+SLCK K+S EAKAL DGMLS GM PN+VTY  LI
Sbjct: 241 EVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLI 300

Query: 301 HGFCKEGNLDEAKSIFKRMINSGCQPDSECYFTLTYFLCRGGDYETAFKICLESMKKGWV 360
           HGFC E + +EAK +FK M+N GC+PDSECYFTL Y+LC+GGD+ETA  +C ESM+K WV
Sbjct: 301 HGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWV 360

Query: 361 PNFSTMKSLVDGLVSISKVEEAKQLIGQIKERFSKNVEKWSEIEAGLPQ 406
           P+FS MKSLV+GL   SKVEEAK+LIGQ+KE+F++NVE W+E+EA LPQ
Sbjct: 361 PSFSIMKSLVNGLAKDSKVEEAKELIGQVKEKFTRNVELWNEVEAALPQ 408

[Close]
BLAST of Cucsa.085960 vs. TAIR10
Match: AT1G11630.1 (AT1G11630.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 441.8 bits (1135), Expect = 4.5e-124
Identity = 220/406 (54.19%), Postives = 306/406 (75.37%), Query Frame = 1 

Query: 1   MALLYRLRSAFPSNSTYINYRLHYRSLSTILSPDSSNPLSAKQK-SRAALSLLKTEENPE 60
           MA L+R+R++       +     +R  S+  S  +   L++KQK SR  LSLLK+E NP+
Sbjct: 1   MAFLFRIRTS----EFILQKATQFRLKSSSSSIFTLKSLTSKQKKSRDTLSLLKSENNPD 60

Query: 61  RIIDICRAASLTPEFHLDRIAFSVAISKLSKFKHFDGIRRFLEE-LKSRPDLKNERFACH 120
           RI++ICR+ SL+P++H+DRI FSVA+  L++ KHF  + + L+  ++++PD K+E FA  
Sbjct: 61  RILEICRSTSLSPDYHVDRIIFSVAVVTLAREKHFVAVSQLLDGFIQNQPDPKSESFAVR 120

Query: 121 AIVLYGQANMLDHAIRTFKQIDELGVRHSVKTLNALLFACNLAKDYKELKRVYMEFPKIY 180
           AI+LYG+ANMLD +I+TF+ +++  +  +VK+LNALLFAC +AKDYKE  RVY+E PK+Y
Sbjct: 121 AIILYGRANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMY 180

Query: 181 GIEPDIDTYNRVIKAFSESGSSSSVSSIVAEMDRKDVKPNATTFANWLAGCYMEEKFEDV 240
           GIEPD++TYNR+I+   ESGS+SS  SIVAEM+RK +KP A +F   + G Y EEKF++V
Sbjct: 181 GIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEV 240

Query: 241 EKVLNLMEKYGVRRGVATYNARIRSLCKLKRSTEAKALFDGMLSRGMDPNSVTYCELIHG 300
            KV+ +M+++GV  GVATYN  I+ LCK K+S EAKAL DG++S  M PNSVTY  LIHG
Sbjct: 241 RKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHG 300

Query: 301 FCKEGNLDEAKSIFKRMINSGCQPDSECYFTLTYFLCRGGDYETAFKICLESMKKGWVPN 360
           FC E NLDEA ++F+ M+ +G +PDSECYFTL + LC+GGD+ETA  +C ESM+K WVP+
Sbjct: 301 FCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPS 360

Query: 361 FSTMKSLVDGLVSISKVEEAKQLIGQIKERFSKNVEKWSEIEAGLP 405
           FS MK LV+GL S SKV+EAK+LI  +KE+F++NV+ W+E+EA LP
Sbjct: 361 FSVMKWLVNGLASRSKVDEAKELIAVVKEKFTRNVDLWNEVEAALP 402

[Close]
BLAST of Cucsa.085960 vs. TAIR10
Match: AT4G36680.1 (AT4G36680.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 196.1 bits (497), Expect = 4.3e-50
Identity = 122/392 (31.12%), Postives = 207/392 (52.81%), Query Frame = 1 

Query: 15  STYINYRLHYRSLSTILSPDSSNPLSAKQKSRAALSLLKTEENPERIIDI-CRAASLTPE 74
           S+ I+ RL  R  S      ++ P S K     A S L+ E +P++ + I    +  +  
Sbjct: 3   SSRISLRLVRRFASAAADGTTTAPSSGKISVSKAKSTLRKEHDPDKALKIYANVSDHSAS 62

Query: 75  FHLDRIAFSVAISKLSKFKHFDGIRRFLEELKSRPDLKNERFACHAIVLYGQANMLDHAI 134
               R A  + + +L+K + F  I   +E  K+ P +K E F    I  YGQA+M +HA+
Sbjct: 63  PVSSRYAQELTVRRLAKCRRFSDIETLIESHKNDPKIKEEPFYSTLIRSYGQASMFNHAM 122

Query: 135 RTFKQIDELGVRHSVKTLNALLFACNLAKDYKELKRVYMEFPKIYG-IEPDIDTYNRVIK 194
           RTF+Q+D+ G   S  + NALL AC  +K++ ++ +++ E P+ Y  I PD  +Y  +IK
Sbjct: 123 RTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIK 182

Query: 195 AFSESGSSSSVSSIVAEMDRKDVKPNATTFANWLAGCYMEEKFEDVEKVLNLMEKYGVRR 254
           ++ +SG+      I+ +M  K ++     F   L+  Y + + E  + + N M K G   
Sbjct: 183 SYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCEL 242

Query: 255 GVATYNARIRSLCKLKRSTEAKALFDGMLSRGMDPNSVTYCELIHGFCKEGNLDEAKSIF 314
             A YN RI S  K +     K L + M S G+ P++++Y  L+  +C+ G LDEAK ++
Sbjct: 243 DNAAYNVRIMSAQK-ESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVY 302

Query: 315 KRMINSGCQPDSECYFTLTYFLCRGGDYETAFKICLESMKKGWVPNFSTMKSLVDGLVSI 374
           + +  + C P++  + TL + LC    YE  + I  +S+    +P+F+T+K LV GLV  
Sbjct: 303 EGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVGLVEN 362

Query: 375 SKVEEAKQLIGQIKERFSKN-VEKWSEIEAGL 404
            K ++AK LI  +K++F  + +  W ++E  L
Sbjct: 363 KKRDDAKGLIRTVKKKFPPSFLNAWKKLEEEL 393

[Close]
BLAST of Cucsa.085960 vs. TAIR10
Match: AT1G55890.1 (AT1G55890.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 193.0 bits (489), Expect = 3.7e-49
Identity = 107/359 (29.81%), Postives = 193/359 (53.76%), Query Frame = 1 

Query: 24  YRSLSTILSPDSSNPLSAKQKSRAALSLLKTEENPERIIDICRAASLTPEFHLDRIAFSV 83
           + S +T++S  ++   +     ++  SL+  E NP+RI++  + A  +  F  +   +  
Sbjct: 20  FSSAATVVSEPTAVTAAISPPQKSLTSLVNGERNPKRIVEKFKKACESERFRTNIAVYDR 79

Query: 84  AISKLSKFKHFDGIRRFLEELKSRPDLKNERFACHAIVLYGQANMLDHAIRTFKQIDELG 143
            + +L   K    +   LEE K   D+  E FA   I LYG+A M ++A + F+++    
Sbjct: 80  TVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFEEMPNRD 139

Query: 144 VRHSVKTLNALLFACNLAKDYKELKRVYMEFPKIYGIEPDIDTYNRVIKAFSESGSSSSV 203
            + SV + NALL A  L+K +  ++ ++ E P    I+PDI +YN +IKA  E  S    
Sbjct: 140 CKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEA 199

Query: 204 SSIVAEMDRKDVKPNATTFANWLAGCYMEEKFEDVEKVLNLMEKYGVRRGVATYNARIRS 263
            +++ E++ K +KP+  TF   L   Y++ +FE  E++   M +  V   + TYNAR+  
Sbjct: 200 VALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLG 259

Query: 264 LCKLKRSTEAKALFDGMLSRGMDPNSVTYCELIHGFCKEGNLDEAKSIFKRMINSGCQPD 323
           L    +S E   LF  + + G+ P+  ++  +I G   EG +DEA++ +K ++  G +PD
Sbjct: 260 LANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPD 319

Query: 324 SECYFTLTYFLCRGGDYETAFKICLESMKKGWVPNFSTMKSLVDGLVSISKVEEAKQLI 383
              +  L   +C+ GD+E+A ++  E+  K ++   +T++ LVD LV  SK EEA++++
Sbjct: 320 KATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEEIV 378

[Close]
BLAST of Cucsa.085960 vs. TAIR10
Match: AT3G13160.1 (AT3G13160.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 188.0 bits (476), Expect = 1.2e-47
Identity = 109/378 (28.84%), Postives = 196/378 (51.85%), Query Frame = 1 

Query: 5   YRLRSAFPSNSTYINYRLHYRSLSTILSPDSSNPLSAKQKSRAALSLLKTEENPERIIDI 64
           + LR  F S ST+ N R      +   +P    P        + ++L+  E +P+ I + 
Sbjct: 7   FLLRGNF-SFSTHTNRRFFSAVTAAAATPSPPKP--------SLITLVNDERDPKFITEK 66

Query: 65  CRAASLTPEFHLDRIAFSVAISKLSKFKHFDGIRRFLEELKSRPDLKNERFACHAIVLYG 124
            + A     F  +   +   + +L+  K F+ +   LEE    P++  E F    I LYG
Sbjct: 67  FKKACQAEWFRKNIAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYG 126

Query: 125 QANMLDHAIRTFKQIDELGVRHSVKTLNALLFACNLAKDYKELKRVYMEFPKIYGIEPDI 184
           +  M ++A + F ++ E   + +  + NALL AC  +K +  ++ ++ E P    IEPD+
Sbjct: 127 RVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDV 186

Query: 185 DTYNRVIKAFSESGSSSSVSSIVAEMDRKDVKPNATTFANWLAGCYMEEKFEDVEKVLNL 244
            +YN +IK     GS +   +++ E++ K +KP+  TF   L   Y + KFE+ E++   
Sbjct: 187 ASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWAR 246

Query: 245 MEKYGVRRGVATYNARIRSLCKLKRSTEAKALFDGMLSRGMDPNSVTYCELIHGFCKEGN 304
           M +  V+R + +YNAR+  L    +S E  +LFD +    + P+  T+  +I GF  EG 
Sbjct: 247 MVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGK 306

Query: 305 LDEAKSIFKRMINSGCQPDSECYFTLTYFLCRGGDYETAFKICLESMKKGWVPNFSTMKS 364
           LDEA + +K +  +GC+P    + +L   +C+ GD E+A+++C E   K  + + + ++ 
Sbjct: 307 LDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQE 366

Query: 365 LVDGLVSISKVEEAKQLI 383
           +VD LV  SK +EA++++
Sbjct: 367 VVDALVKGSKQDEAEEIV 375

[Close]
BLAST of Cucsa.085960 vs. NCBI nr
Match: gi|778658444|ref|XP_011652746.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g61870, mitochondrial [Cucumis sativus])

HSP 1 Score: 810.1 bits (2091), Expect = 1.8e-231
Identity = 405/405 (100.00%), Postives = 405/405 (100.00%), Query Frame = 1 

Query: 1   MALLYRLRSAFPSNSTYINYRLHYRSLSTILSPDSSNPLSAKQKSRAALSLLKTEENPER 60
           MALLYRLRSAFPSNSTYINYRLHYRSLSTILSPDSSNPLSAKQKSRAALSLLKTEENPER
Sbjct: 1   MALLYRLRSAFPSNSTYINYRLHYRSLSTILSPDSSNPLSAKQKSRAALSLLKTEENPER 60

Query: 61  IIDICRAASLTPEFHLDRIAFSVAISKLSKFKHFDGIRRFLEELKSRPDLKNERFACHAI 120
           IIDICRAASLTPEFHLDRIAFSVAISKLSKFKHFDGIRRFLEELKSRPDLKNERFACHAI
Sbjct: 61  IIDICRAASLTPEFHLDRIAFSVAISKLSKFKHFDGIRRFLEELKSRPDLKNERFACHAI 120

Query: 121 VLYGQANMLDHAIRTFKQIDELGVRHSVKTLNALLFACNLAKDYKELKRVYMEFPKIYGI 180
           VLYGQANMLDHAIRTFKQIDELGVRHSVKTLNALLFACNLAKDYKELKRVYMEFPKIYGI
Sbjct: 121 VLYGQANMLDHAIRTFKQIDELGVRHSVKTLNALLFACNLAKDYKELKRVYMEFPKIYGI 180

Query: 181 EPDIDTYNRVIKAFSESGSSSSVSSIVAEMDRKDVKPNATTFANWLAGCYMEEKFEDVEK 240
           EPDIDTYNRVIKAFSESGSSSSVSSIVAEMDRKDVKPNATTFANWLAGCYMEEKFEDVEK
Sbjct: 181 EPDIDTYNRVIKAFSESGSSSSVSSIVAEMDRKDVKPNATTFANWLAGCYMEEKFEDVEK 240

Query: 241 VLNLMEKYGVRRGVATYNARIRSLCKLKRSTEAKALFDGMLSRGMDPNSVTYCELIHGFC 300
           VLNLMEKYGVRRGVATYNARIRSLCKLKRSTEAKALFDGMLSRGMDPNSVTYCELIHGFC
Sbjct: 241 VLNLMEKYGVRRGVATYNARIRSLCKLKRSTEAKALFDGMLSRGMDPNSVTYCELIHGFC 300

Query: 301 KEGNLDEAKSIFKRMINSGCQPDSECYFTLTYFLCRGGDYETAFKICLESMKKGWVPNFS 360
           KEGNLDEAKSIFKRMINSGCQPDSECYFTLTYFLCRGGDYETAFKICLESMKKGWVPNFS
Sbjct: 301 KEGNLDEAKSIFKRMINSGCQPDSECYFTLTYFLCRGGDYETAFKICLESMKKGWVPNFS 360

Query: 361 TMKSLVDGLVSISKVEEAKQLIGQIKERFSKNVEKWSEIEAGLPQ 406
           TMKSLVDGLVSISKVEEAKQLIGQIKERFSKNVEKWSEIEAGLPQ
Sbjct: 361 TMKSLVDGLVSISKVEEAKQLIGQIKERFSKNVEKWSEIEAGLPQ 405

[Close]
BLAST of Cucsa.085960 vs. NCBI nr
Match: gi|659067768|ref|XP_008441198.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g61870, mitochondrial [Cucumis melo])

HSP 1 Score: 746.5 bits (1926), Expect = 2.4e-212
Identity = 371/405 (91.60%), Postives = 385/405 (95.06%), Query Frame = 1 

Query: 1   MALLYRLRSAFPSNSTYINYRLHYRSLSTILSPDSSNPLSAKQKSRAALSLLKTEENPER 60
           MALLYRLRSAF SNSTYINY LHYRSLSTILSPDSS PLSAKQKSRAALSLLKTEENPER
Sbjct: 1   MALLYRLRSAFSSNSTYINYHLHYRSLSTILSPDSSTPLSAKQKSRAALSLLKTEENPER 60

Query: 61  IIDICRAASLTPEFHLDRIAFSVAISKLSKFKHFDGIRRFLEELKSRPDLKNERFACHAI 120
           IIDICRAA+LTPEFHLDRIAFSVAISKLSK KH+DGI RFLEELKSRPDLKNERFACH I
Sbjct: 61  IIDICRAAALTPEFHLDRIAFSVAISKLSKSKHYDGIHRFLEELKSRPDLKNERFACHVI 120

Query: 121 VLYGQANMLDHAIRTFKQIDELGVRHSVKTLNALLFACNLAKDYKELKRVYMEFPKIYGI 180
            LYGQANMLDHAIRTFKQIDELGVRHSVK LN+LLFACN+AKDYKELKRV+MEFPKIYGI
Sbjct: 121 ALYGQANMLDHAIRTFKQIDELGVRHSVKLLNSLLFACNVAKDYKELKRVFMEFPKIYGI 180

Query: 181 EPDIDTYNRVIKAFSESGSSSSVSSIVAEMDRKDVKPNATTFANWLAGCYMEEKFEDVEK 240
           EPDIDTYNRVIKAFSESGSSSSVSSIVAEMDRK+VKPNAT+FANWLAGCYMEEK+EDVEK
Sbjct: 181 EPDIDTYNRVIKAFSESGSSSSVSSIVAEMDRKNVKPNATSFANWLAGCYMEEKYEDVEK 240

Query: 241 VLNLMEKYGVRRGVATYNARIRSLCKLKRSTEAKALFDGMLSRGMDPNSVTYCELIHGFC 300
           VL LMEKYGVRRGVATYNARI+SLCKLK+S EAKALFDGMLSRG  PN VTYCELIHGF 
Sbjct: 241 VLKLMEKYGVRRGVATYNARIQSLCKLKKSAEAKALFDGMLSRGTKPNCVTYCELIHGFS 300

Query: 301 KEGNLDEAKSIFKRMINSGCQPDSECYFTLTYFLCRGGDYETAFKICLESMKKGWVPNFS 360
           KEGNLDEAKS+FKRMINSGC+PDS CYFTL YFLCRGGDYETA KIC ESM+KGWVPNF 
Sbjct: 301 KEGNLDEAKSLFKRMINSGCKPDSNCYFTLIYFLCRGGDYETALKICSESMEKGWVPNFG 360

Query: 361 TMKSLVDGLVSISKVEEAKQLIGQIKERFSKNVEKWSEIEAGLPQ 406
           TMKSLVDGLVSISKVEEAKQLIGQIKERFS NVEKWSE+EAGLPQ
Sbjct: 361 TMKSLVDGLVSISKVEEAKQLIGQIKERFSNNVEKWSEMEAGLPQ 405

[Close]
BLAST of Cucsa.085960 vs. NCBI nr
Match: gi|1009108552|ref|XP_015885253.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g61870, mitochondrial [Ziziphus jujuba])

HSP 1 Score: 566.6 bits (1459), Expect = 3.5e-158
Identity = 277/405 (68.40%), Postives = 334/405 (82.47%), Query Frame = 1 

Query: 1   MALLYRLRSAFPSNSTYINYRLHYRSLSTILSPDSSNPLSAKQKSRAALSLLKTEENPER 60
           M+L  RLR A           L  R  STILSP+S+ PLS+K+K+RAALSLLKTEENP R
Sbjct: 1   MSLFSRLRQA----------SLSRRHFSTILSPNSTTPLSSKEKTRAALSLLKTEENPNR 60

Query: 61  IIDICRAASLTPEFHLDRIAFSVAISKLSKFKHFDGIRRFLEELKSRPDLKNERFACHAI 120
           I++IC+AASLTPE HLDRIA SVA +KLSK  HF+ IR F+++LKSRPDL+ ERFA H+I
Sbjct: 61  IVEICKAASLTPESHLDRIALSVAFNKLSKSNHFEAIREFIDDLKSRPDLRTERFASHSI 120

Query: 121 VLYGQANMLDHAIRTFKQIDELGVRHSVKTLNALLFACNLAKDYKELKRVYMEFPKIYGI 180
           VLYGQANM+DHA+R FKQ  +LGV HSVK LN+L+FAC LAK+YKE+ R+++EFPK YGI
Sbjct: 121 VLYGQANMIDHAVRAFKQCGDLGVSHSVKMLNSLIFACILAKNYKEVNRIFLEFPKNYGI 180

Query: 181 EPDIDTYNRVIKAFSESGSSSSVSSIVAEMDRKDVKPNATTFANWLAGCYMEEKFEDVEK 240
           EP+++TYN VIKAF+ESGS+SS  S++AEMDRK VKPNATTFAN ++G Y EE+F+DV K
Sbjct: 181 EPNLETYNWVIKAFAESGSTSSAYSVLAEMDRKGVKPNATTFANLISGFYAEERFDDVGK 240

Query: 241 VLNLMEKYGVRRGVATYNARIRSLCKLKRSTEAKALFDGMLSRGMDPNSVTYCELIHGFC 300
           V N+MEKYG+R G   YNARI SLCKL+RS EAKAL DGML+RGM PNSVTY  LIHGFC
Sbjct: 241 VTNMMEKYGLRPGHTAYNARILSLCKLRRSAEAKALLDGMLARGMKPNSVTYSHLIHGFC 300

Query: 301 KEGNLDEAKSIFKRMINSGCQPDSECYFTLTYFLCRGGDYETAFKICLESMKKGWVPNFS 360
           KEGNLDEAK +FKRM+NSGC+PDS CYFT+ YFLC+G D+E+A +  LESM+K WVPNFS
Sbjct: 301 KEGNLDEAKKLFKRMVNSGCKPDSNCYFTMVYFLCQGNDFESALQFSLESMEKNWVPNFS 360

Query: 361 TMKSLVDGLVSISKVEEAKQLIGQIKERFSKNVEKWSEIEAGLPQ 406
           TMK+LVDGLVSISKV EA+ LI +IKER + N +KW+EIE+ LPQ
Sbjct: 361 TMKTLVDGLVSISKVAEARDLIAKIKERITVNADKWNEIESSLPQ 395

[Close]
BLAST of Cucsa.085960 vs. NCBI nr
Match: gi|731435181|ref|XP_003634851.2| (PREDICTED: pentatricopeptide repeat-containing protein At1g61870, mitochondrial-like [Vitis vinifera])

HSP 1 Score: 550.8 bits (1418), Expect = 2.0e-153
Identity = 265/381 (69.55%), Postives = 329/381 (86.35%), Query Frame = 1 

Query: 25  RSLSTILSPDSSNPLSAKQKSRAALSLLKTEENPERIIDICRAASLTPEFHLDRIAFSVA 84
           R  S+ILSPDS+ PLS+K+KSRAALSLLK+E++P+RI++ICRAA+LTPE HLDR+AFSVA
Sbjct: 42  RFFSSILSPDSATPLSSKEKSRAALSLLKSEQDPQRILEICRAAALTPESHLDRVAFSVA 101

Query: 85  ISKLSKFKHFDGIRRFLEELKSRPDLKNERFACHAIVLYGQANMLDHAIRTFKQIDELGV 144
           ISKL+  KHFD IR FL+ELK+RPDL+ ERF  HAIVL+GQA ML+ A+RTF+Q+ +LGV
Sbjct: 102 ISKLADSKHFDSIRHFLDELKARPDLRTERFVSHAIVLFGQAGMLNDAVRTFEQMHQLGV 161

Query: 145 RHSVKTLNALLFACNLAKDYKELKRVYMEFPKIYGIEPDIDTYNRVIKAFSESGSSSSVS 204
             +V++LNALLF+C LAK+YKE  R+++EFPK YGIE ++D+YN V+KAFSESGSSSS  
Sbjct: 162 DRTVRSLNALLFSCILAKNYKEANRIFLEFPKTYGIELNLDSYNTVLKAFSESGSSSSGY 221

Query: 205 SIVAEMDRKDVKPNATTFANWLAGCYMEEKFEDVEKVLNLMEKYGVRRGVATYNARIRSL 264
           SI+AEM RK VKPNAT+F   LAG Y EEK+EDV KVL +ME+Y ++ G++TYN RI+SL
Sbjct: 222 SILAEMGRKGVKPNATSFGILLAGFYNEEKYEDVGKVLKMMEEYKMQPGISTYNIRIQSL 281

Query: 265 CKLKRSTEAKALFDGMLSRGMDPNSVTYCELIHGFCKEGNLDEAKSIFKRMINSGCQPDS 324
           CKLK+S+EAKAL DG+L+R M PNS TYC LIHGFCKEGNLDEAK +FK M+N GC+PDS
Sbjct: 282 CKLKKSSEAKALLDGILARRMKPNSETYCHLIHGFCKEGNLDEAKKLFKDMVNRGCKPDS 341

Query: 325 ECYFTLTYFLCRGGDYETAFKICLESMKKGWVPNFSTMKSLVDGLVSISKVEEAKQLIGQ 384
           +CYFTL YFLC+GGD+E+A + C E M+KGW PN STM SLV+GLVSISKVEEA++LIGQ
Sbjct: 342 DCYFTLVYFLCQGGDFESALRFCKECMEKGWFPNISTMTSLVNGLVSISKVEEARELIGQ 401

Query: 385 IKERFSKNVEKWSEIEAGLPQ 406
           IKE+FS+NV+KW+EIEAGLPQ
Sbjct: 402 IKEKFSRNVDKWNEIEAGLPQ 422

[Close]
BLAST of Cucsa.085960 vs. NCBI nr
Match: gi|147767812|emb|CAN77919.1| (hypothetical protein VITISV_027645 [Vitis vinifera])

HSP 1 Score: 550.4 bits (1417), Expect = 2.6e-153
Identity = 265/381 (69.55%), Postives = 329/381 (86.35%), Query Frame = 1 

Query: 25  RSLSTILSPDSSNPLSAKQKSRAALSLLKTEENPERIIDICRAASLTPEFHLDRIAFSVA 84
           R  S+ILSPDS+ PLS+K+KSRAALSLLK+E++P+RI++ICRAA+LTPE HLDR+AFSVA
Sbjct: 16  RFFSSILSPDSATPLSSKEKSRAALSLLKSEQDPQRILEICRAAALTPESHLDRVAFSVA 75

Query: 85  ISKLSKFKHFDGIRRFLEELKSRPDLKNERFACHAIVLYGQANMLDHAIRTFKQIDELGV 144
           ISKL+  KHFD IR FL+ELK+RPDL+ ERF  HAIVL+GQA ML+ A+RTF+Q+ +LGV
Sbjct: 76  ISKLADSKHFDSIRHFLDELKARPDLRTERFVSHAIVLFGQAGMLNDAVRTFEQMHQLGV 135

Query: 145 RHSVKTLNALLFACNLAKDYKELKRVYMEFPKIYGIEPDIDTYNRVIKAFSESGSSSSVS 204
             +V++LNALLF+C LAK+YKE  R+++EFPK YGIE ++D+YN V+KAFSESGSSSS  
Sbjct: 136 DRTVRSLNALLFSCILAKNYKEANRIFLEFPKTYGIELNLDSYNTVLKAFSESGSSSSGY 195

Query: 205 SIVAEMDRKDVKPNATTFANWLAGCYMEEKFEDVEKVLNLMEKYGVRRGVATYNARIRSL 264
           SI+AEM RK VKPNAT+F   LAG Y EEK+EDV KVL +ME+Y ++ G++TYN RI+SL
Sbjct: 196 SILAEMGRKGVKPNATSFGILLAGFYNEEKYEDVGKVLKMMEEYKMQPGISTYNIRIQSL 255

Query: 265 CKLKRSTEAKALFDGMLSRGMDPNSVTYCELIHGFCKEGNLDEAKSIFKRMINSGCQPDS 324
           CKLK+S+EAKAL DG+L+R M PNS TYC LIHGFCKEGNLDEAK +FK M+N GC+PDS
Sbjct: 256 CKLKKSSEAKALLDGILARRMKPNSETYCHLIHGFCKEGNLDEAKKLFKDMVNRGCKPDS 315

Query: 325 ECYFTLTYFLCRGGDYETAFKICLESMKKGWVPNFSTMKSLVDGLVSISKVEEAKQLIGQ 384
           +CYFTL YFLC+GGD+E+A + C E M+KGW PN STM SLV+GLVSISKVEEA++LIGQ
Sbjct: 316 DCYFTLVYFLCQGGDFESALRFCKECMEKGWFPNISTMTSLVNGLVSISKVEEAQELIGQ 375

Query: 385 IKERFSKNVEKWSEIEAGLPQ 406
           IKE+FS+NV+KW+EIEAGLPQ
Sbjct: 376 IKEKFSRNVDKWNEIEAGLPQ 396

The following BLAST results are available for this feature:
BLAST of Cucsa.085960 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PPR87_ARATH1.4e-14361.37Pentatricopeptide repeat-containing protein At1g61870, mitochondrial OS=Arabidop... [more]
PPR33_ARATH8.0e-12354.19Pentatricopeptide repeat-containing protein At1g11630, mitochondrial OS=Arabidop... [more]
PP352_ARATH7.7e-4931.12Pentatricopeptide repeat-containing protein At4g36680, mitochondrial OS=Arabidop... [more]
PPR82_ARATH6.5e-4829.81Pentatricopeptide repeat-containing protein At1g55890, mitochondrial OS=Arabidop... [more]
PP226_ARATH2.1e-4628.84Pentatricopeptide repeat-containing protein At3g13160, mitochondrial OS=Arabidop... [more]
BLAST of Cucsa.085960 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LRL9_CUCSA1.3e-231100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G063590 PE=4 SV=1[more]
F6HRE2_VITVI1.4e-15369.55Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0116g00030 PE=4 SV=... [more]
A5AGX1_VITVI1.8e-15369.55Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027645 PE=4 SV=1[more]
A0A059CAY2_EUCGR8.9e-15369.47Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E04079 PE=4 SV=1[more]
A0A067JLA1_JATCU3.9e-14867.15Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21241 PE=4 SV=1[more]
BLAST of Cucsa.085960 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G61870.17.9e-14561.37 pentatricopeptide repeat 336[more]
AT1G11630.14.5e-12454.19 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT4G36680.14.3e-5031.12 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G55890.13.7e-4929.81 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G13160.11.2e-4728.84 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
BLAST of Cucsa.085960 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778658444|ref|XP_011652746.1|1.8e-231100.00PREDICTED: pentatricopeptide repeat-containing protein At1g61870, mitochondrial ... [more]
gi|659067768|ref|XP_008441198.1|2.4e-21291.60PREDICTED: pentatricopeptide repeat-containing protein At1g61870, mitochondrial ... [more]
gi|1009108552|ref|XP_015885253.1|3.5e-15868.40PREDICTED: pentatricopeptide repeat-containing protein At1g61870, mitochondrial ... [more]
gi|731435181|ref|XP_003634851.2|2.0e-15369.55PREDICTED: pentatricopeptide repeat-containing protein At1g61870, mitochondrial-... [more]
gi|147767812|emb|CAN77919.1|2.6e-15369.55hypothetical protein VITISV_027645 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.085960.1Cucsa.085960.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 361..388
score: 1.1coord: 221..250
score:
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 253..301
score: 3.4
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 136..194
score: 1.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 186..219
score: 0.0013coord: 256..288
score: 4.3E-8coord: 290..324
score: 1.6
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 218..252
score: 7.728coord: 358..388
score: 7.059coord: 288..322
score: 14.294coord: 147..182
score: 6.248coord: 77..107
score: 6.259coord: 253..287
score: 11.071coord: 183..217
score: 9.942coord: 112..146
score: 5.788coord: 323..357
score: 8
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 37..164
score: 9.6E-10coord: 256..385
score: 9.6
IPR011990Tetratricopeptide-like helical domainunknownSSF48452TPR-likecoord: 59..396
score: 1.0
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 25..399
score: 1.8E
NoneNo IPR availablePANTHERPTHR24015:SF579SUBFAMILY NOT NAMEDcoord: 25..399
score: 1.8E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.085960Cla019393Watermelon (97103) v1cgywmB097
Cucsa.085960Csa1G063590Cucumber (Chinese Long) v2cgycuB087
Cucsa.085960ClCG03G004860Watermelon (Charleston Gray)cgywcgB095
Cucsa.085960CSPI01G10830Wild cucumber (PI 183967)cgycpiB090
Cucsa.085960CmaCh18G002480Cucurbita maxima (Rimu)cgycmaB0163
Cucsa.085960CmoCh18G002800Cucurbita moschata (Rifu)cgycmoB0158
Cucsa.085960CmoCh13G007550Cucurbita moschata (Rifu)cgycmoB0157
Cucsa.085960Lsi02G006120Bottle gourd (USVL1VR-Ls)cgylsiB094
Cucsa.085960Cp4.1LG09g09080Cucurbita pepo (Zucchini)cgycpeB0156
Cucsa.085960Cp4.1LG20g03740Cucurbita pepo (Zucchini)cgycpeB0159
Cucsa.085960MELO3C007342.2Melon (DHL92) v3.6.1cgymedB095
Cucsa.085960CsaV3_1G010890Cucumber (Chinese Long) v3cgycucB089
Cucsa.085960Cla97C03G056010Watermelon (97103) v2cgywmbB092
Cucsa.085960Bhi08G001523Wax gourdcgywgoB108
Cucsa.085960Carg06855Silver-seed gourdcarcgyB0566
Cucsa.085960Carg07537Silver-seed gourdcarcgyB1119
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.085960Silver-seed gourdcarcgyB0715
Cucsa.085960Silver-seed gourdcarcgyB1050
Cucsa.085960Cucumber (Chinese Long) v3cgycucB090
Cucsa.085960Watermelon (97103) v2cgywmbB091
Cucsa.085960Wax gourdcgywgoB107
Cucsa.085960Cucumber (Gy14) v1cgycgyB002
Cucsa.085960Cucumber (Gy14) v1cgycgyB030
Cucsa.085960Cucurbita maxima (Rimu)cgycmaB0162
Cucsa.085960Cucurbita maxima (Rimu)cgycmaB0164
Cucsa.085960Cucurbita maxima (Rimu)cgycmaB0165
Cucsa.085960Cucurbita moschata (Rifu)cgycmoB0159
Cucsa.085960Cucurbita moschata (Rifu)cgycmoB0160
Cucsa.085960Wild cucumber (PI 183967)cgycpiB091
Cucsa.085960Cucumber (Chinese Long) v2cgycuB088
Cucsa.085960Melon (DHL92) v3.5.1cgymeB097
Cucsa.085960Melon (DHL92) v3.5.1cgymeB096
Cucsa.085960Watermelon (Charleston Gray)cgywcgB094
Cucsa.085960Watermelon (97103) v1cgywmB098
Cucsa.085960Cucurbita pepo (Zucchini)cgycpeB0157
Cucsa.085960Cucurbita pepo (Zucchini)cgycpeB0158
Cucsa.085960Bottle gourd (USVL1VR-Ls)cgylsiB093
Cucsa.085960Melon (DHL92) v3.6.1cgymedB094
Cucsa.085960Melon (DHL92) v3.6.1cgymedB096