Cp4.1LG20g03740 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG20g03740
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionPentatricopeptide repeat-containing protein
LocationCp4.1LG20 : 2108000 .. 2109217 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGCTTCTTTATCGCCTCCGCAATGCTTTCCCTTCGAATTCGAGTTACATCAACCATCGTCTTCACTACCGTTGTCTATCGACAATCCTTTCCCCTGATTCCACTAATCCTTTGTCAGCTAAACAGAAATCGAGGGCCGCATTGTCCCTACTGAAAGTTGAGGAAAATCCTGAGCGTATAATCGATATTTGCCGAGCTGCTACTCTCACTCCAGAATCACATCTCGATCGCATCGCTTTCTCTGTTGCTATTTCTAAGCTTTCAGAGTCCAAGCATTTCGATGGGATTCGCCTGTTCCTCGAGGAATTGAAGTCTCGTCCCGACTTGAAAAACGAGCGTTTTGCTTGCCACGCTATTATTCTCTATGGCCAGGCCAATATGCTCGATCATGCTATTCGCACTTTCAAGCAAATTGATGAACTGGGTGTGCGTCCTTCGGTTAAATCGCTTAATGCATTGCTATTTGCTTGTAATGTAGCTAAGGACTACAAGGAACTGAAGCGGGTTTTTATGGAGTTTCCTAAGATTTATGGTATCGAACCAGATCTCGATACTTATAACAGAGTAATCAAGGCGTTTTCAAAGTCGGGTTCCGCGAGTGCAGTGTATTCGATTGTGGCGGAAATGGACAGGAAGGGTGTCAAACCAAATGCGACTACTTTTGCGAACTGGCTTGCTGGATGCTATAAGGAAGAGAAGTACGAGGATGTTGAGAAAGTCATAAATTTGATGGGAAAATATGGTGTGCGGCGTGGAGTTAGTACATATAATGCAAGAATACTGAGTCTTTGTAAATTGAAGAAATCATCAGAGGCGAAGGCTTTATTTGATGGGATGTTGTCGAGAGGTATGAAACCAAACTCTGTTACATACTGTAAGTTGATTCATGGATTCTGTAGGGAAGGAAATCTGGATGAAGCTAAGAATCTTTTTAAGAGAATGATCAACAGCGGTTGCCAACCTGACAGTGATTGCTATTTCACTTTGGTTTATTTCCATTGTCGAGGAGGAGATTATGATACTGCTTTCAAGATCTGTGGCGAAAGCATGGAGAAGGGGTGGGTTCCAAATATCACTACGATGAAGTCTCTTGTTTATGGATTAGTTAGCATTTCAAAGGTCGACGAGGCAAAGCAACTTATTGGGCAAATCAAGGAGAGGTTCTCAAAGAATGTTGAAAAGTGGAATGAAATTGAAGCTGGATTACCTCAGTGA

mRNA sequence

ATGGCGCTTCTTTATCGCCTCCGCAATGCTTTCCCTTCGAATTCGAGTTACATCAACCATCGTCTTCACTACCGTTGTCTATCGACAATCCTTTCCCCTGATTCCACTAATCCTTTGTCAGCTAAACAGAAATCGAGGGCCGCATTGTCCCTACTGAAAGTTGAGGAAAATCCTGAGCGTATAATCGATATTTGCCGAGCTGCTACTCTCACTCCAGAATCACATCTCGATCGCATCGCTTTCTCTGTTGCTATTTCTAAGCTTTCAGAGTCCAAGCATTTCGATGGGATTCGCCTGTTCCTCGAGGAATTGAAGTCTCGTCCCGACTTGAAAAACGAGCGTTTTGCTTGCCACGCTATTATTCTCTATGGCCAGGCCAATATGCTCGATCATGCTATTCGCACTTTCAAGCAAATTGATGAACTGGGTGTGCGTCCTTCGGTTAAATCGCTTAATGCATTGCTATTTGCTTGTAATGTAGCTAAGGACTACAAGGAACTGAAGCGGGTTTTTATGGAGTTTCCTAAGATTTATGGTATCGAACCAGATCTCGATACTTATAACAGAGTAATCAAGGCGTTTTCAAAGTCGGGTTCCGCGAGTGCAGTGTATTCGATTGTGGCGGAAATGGACAGGAAGGGTGTCAAACCAAATGCGACTACTTTTGCGAACTGGCTTGCTGGATGCTATAAGGAAGAGAAGTACGAGGATGTTGAGAAAGTCATAAATTTGATGGGAAAATATGGTGTGCGGCGTGGAGTTAGTACATATAATGCAAGAATACTGAGTCTTTGTAAATTGAAGAAATCATCAGAGGCGAAGGCTTTATTTGATGGGATGTTGTCGAGAGGTATGAAACCAAACTCTGTTACATACTGTAAGTTGATTCATGGATTCTGTAGGGAAGGAAATCTGGATGAAGCTAAGAATCTTTTTAAGAGAATGATCAACAGCGGTTGCCAACCTGACAGTGATTGCTATTTCACTTTGGTTTATTTCCATTGTCGAGGAGGAGATTATGATACTGCTTTCAAGATCTGTGGCGAAAGCATGGAGAAGGGGTGGGTTCCAAATATCACTACGATGAAGTCTCTTGTTTATGGATTAGTTAGCATTTCAAAGGTCGACGAGGCAAAGCAACTTATTGGGCAAATCAAGGAGAGGTTCTCAAAGAATGTTGAAAAGTGGAATGAAATTGAAGCTGGATTACCTCAGTGA

Coding sequence (CDS)

ATGGCGCTTCTTTATCGCCTCCGCAATGCTTTCCCTTCGAATTCGAGTTACATCAACCATCGTCTTCACTACCGTTGTCTATCGACAATCCTTTCCCCTGATTCCACTAATCCTTTGTCAGCTAAACAGAAATCGAGGGCCGCATTGTCCCTACTGAAAGTTGAGGAAAATCCTGAGCGTATAATCGATATTTGCCGAGCTGCTACTCTCACTCCAGAATCACATCTCGATCGCATCGCTTTCTCTGTTGCTATTTCTAAGCTTTCAGAGTCCAAGCATTTCGATGGGATTCGCCTGTTCCTCGAGGAATTGAAGTCTCGTCCCGACTTGAAAAACGAGCGTTTTGCTTGCCACGCTATTATTCTCTATGGCCAGGCCAATATGCTCGATCATGCTATTCGCACTTTCAAGCAAATTGATGAACTGGGTGTGCGTCCTTCGGTTAAATCGCTTAATGCATTGCTATTTGCTTGTAATGTAGCTAAGGACTACAAGGAACTGAAGCGGGTTTTTATGGAGTTTCCTAAGATTTATGGTATCGAACCAGATCTCGATACTTATAACAGAGTAATCAAGGCGTTTTCAAAGTCGGGTTCCGCGAGTGCAGTGTATTCGATTGTGGCGGAAATGGACAGGAAGGGTGTCAAACCAAATGCGACTACTTTTGCGAACTGGCTTGCTGGATGCTATAAGGAAGAGAAGTACGAGGATGTTGAGAAAGTCATAAATTTGATGGGAAAATATGGTGTGCGGCGTGGAGTTAGTACATATAATGCAAGAATACTGAGTCTTTGTAAATTGAAGAAATCATCAGAGGCGAAGGCTTTATTTGATGGGATGTTGTCGAGAGGTATGAAACCAAACTCTGTTACATACTGTAAGTTGATTCATGGATTCTGTAGGGAAGGAAATCTGGATGAAGCTAAGAATCTTTTTAAGAGAATGATCAACAGCGGTTGCCAACCTGACAGTGATTGCTATTTCACTTTGGTTTATTTCCATTGTCGAGGAGGAGATTATGATACTGCTTTCAAGATCTGTGGCGAAAGCATGGAGAAGGGGTGGGTTCCAAATATCACTACGATGAAGTCTCTTGTTTATGGATTAGTTAGCATTTCAAAGGTCGACGAGGCAAAGCAACTTATTGGGCAAATCAAGGAGAGGTTCTCAAAGAATGTTGAAAAGTGGAATGAAATTGAAGCTGGATTACCTCAGTGA

Protein sequence

MALLYRLRNAFPSNSSYINHRLHYRCLSTILSPDSTNPLSAKQKSRAALSLLKVEENPERIIDICRAATLTPESHLDRIAFSVAISKLSESKHFDGIRLFLEELKSRPDLKNERFACHAIILYGQANMLDHAIRTFKQIDELGVRPSVKSLNALLFACNVAKDYKELKRVFMEFPKIYGIEPDLDTYNRVIKAFSKSGSASAVYSIVAEMDRKGVKPNATTFANWLAGCYKEEKYEDVEKVINLMGKYGVRRGVSTYNARILSLCKLKKSSEAKALFDGMLSRGMKPNSVTYCKLIHGFCREGNLDEAKNLFKRMINSGCQPDSDCYFTLVYFHCRGGDYDTAFKICGESMEKGWVPNITTMKSLVYGLVSISKVDEAKQLIGQIKERFSKNVEKWNEIEAGLPQ
Homology
[Close]
BLAST of Cp4.1LG20g03740 vs. Swiss-Prot
Match: PPR87_ARATH (Pentatricopeptide repeat-containing protein At1g61870, mitochondrial OS=Arabidopsis thaliana GN=PPR336 PE=2 SV=2)

HSP 1 Score: 511.1 bits (1315), Expect = 1.1e-143
Identity = 250/409 (61.12%), Postives = 324/409 (79.22%), Query Frame = 1 

Query: 1   MALLYRLRNAFPSNSSYINHRLHYRCLS---TILSPDSTNPLSAKQKSRAALSLLKVEEN 60
           MALL R+R++  S   ++N     R LS   TILSPDS  PL++K+KS+AALSLLK E++
Sbjct: 1   MALLSRIRSS-TSLFRHLNASPQIRSLSSASTILSPDSKTPLTSKEKSKAALSLLKSEKD 60

Query: 61  PERIIDICRAATLTPESHLDRIAFSVAISKLSESKHFDGIRLFLEE-LKSRPDLKNERFA 120
           P+RI++ICRAA+LTP+  +DRIAFS A+  L+E KHF  +   L+  +++RPDLK+ERFA
Sbjct: 61  PDRILEICRAASLTPDCRIDRIAFSAAVENLAEKKHFSAVSNLLDGFIENRPDLKSERFA 120

Query: 121 CHAIILYGQANMLDHAIRTFKQIDELGVRPSVKSLNALLFACNVAKDYKELKRVFMEFPK 180
            HAI+LY QANMLDH++R F+ +++  +  +VKSLNALLFAC VAKDYKE KRV++E PK
Sbjct: 121 AHAIVLYAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPK 180

Query: 181 IYGIEPDLDTYNRVIKAFSKSGSASAVYSIVAEMDRKGVKPNATTFANWLAGCYKEEKYE 240
           +YGIEPDL+TYNR+IK F +SGSAS+ YSIVAEM+RKG+KPN+++F   ++G Y E+K +
Sbjct: 181 MYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSD 240

Query: 241 DVEKVINLMGKYGVRRGVSTYNARILSLCKLKKSSEAKALFDGMLSRGMKPNSVTYCKLI 300
           +V KV+ +M   GV  GVSTYN RI SLCK KKS EAKAL DGMLS GMKPN+VTY  LI
Sbjct: 241 EVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLI 300

Query: 301 HGFCREGNLDEAKNLFKRMINSGCQPDSDCYFTLVYFHCRGGDYDTAFKICGESMEKGWV 360
           HGFC E + +EAK LFK M+N GC+PDS+CYFTL+Y+ C+GGD++TA  +C ESMEK WV
Sbjct: 301 HGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWV 360

Query: 361 PNITTMKSLVYGLVSISKVDEAKQLIGQIKERFSKNVEKWNEIEAGLPQ 406
           P+ + MKSLV GL   SKV+EAK+LIGQ+KE+F++NVE WNE+EA LPQ
Sbjct: 361 PSFSIMKSLVNGLAKDSKVEEAKELIGQVKEKFTRNVELWNEVEAALPQ 408

[Close]
BLAST of Cp4.1LG20g03740 vs. Swiss-Prot
Match: PPR33_ARATH (Pentatricopeptide repeat-containing protein At1g11630, mitochondrial OS=Arabidopsis thaliana GN=At1g11630 PE=2 SV=1)

HSP 1 Score: 441.0 bits (1133), Expect = 1.4e-122
Identity = 220/406 (54.19%), Postives = 301/406 (74.14%), Query Frame = 1 

Query: 1   MALLYRLRNAFPSNSSYINHRLHYRCLSTILSPDSTNPLSAKQK-SRAALSLLKVEENPE 60
           MA L+R+R    ++   +     +R  S+  S  +   L++KQK SR  LSLLK E NP+
Sbjct: 1   MAFLFRIR----TSEFILQKATQFRLKSSSSSIFTLKSLTSKQKKSRDTLSLLKSENNPD 60

Query: 61  RIIDICRAATLTPESHLDRIAFSVAISKLSESKHFDGIRLFLEE-LKSRPDLKNERFACH 120
           RI++ICR+ +L+P+ H+DRI FSVA+  L+  KHF  +   L+  ++++PD K+E FA  
Sbjct: 61  RILEICRSTSLSPDYHVDRIIFSVAVVTLAREKHFVAVSQLLDGFIQNQPDPKSESFAVR 120

Query: 121 AIILYGQANMLDHAIRTFKQIDELGVRPSVKSLNALLFACNVAKDYKELKRVFMEFPKIY 180
           AIILYG+ANMLD +I+TF+ +++  +  +VKSLNALLFAC +AKDYKE  RV++E PK+Y
Sbjct: 121 AIILYGRANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMY 180

Query: 181 GIEPDLDTYNRVIKAFSKSGSASAVYSIVAEMDRKGVKPNATTFANWLAGCYKEEKYEDV 240
           GIEPDL+TYNR+I+   +SGS S+ YSIVAEM+RK +KP A +F   + G YKEEK+++V
Sbjct: 181 GIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEV 240

Query: 241 EKVINLMGKYGVRRGVSTYNARILSLCKLKKSSEAKALFDGMLSRGMKPNSVTYCKLIHG 300
            KV+ +M ++GV  GV+TYN  I  LCK KKS+EAKAL DG++S  M+PNSVTY  LIHG
Sbjct: 241 RKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHG 300

Query: 301 FCREGNLDEAKNLFKRMINSGCQPDSDCYFTLVYFHCRGGDYDTAFKICGESMEKGWVPN 360
           FC E NLDEA NLF+ M+ +G +PDS+CYFTL++  C+GGD++TA  +C ESMEK WVP+
Sbjct: 301 FCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPS 360

Query: 361 ITTMKSLVYGLVSISKVDEAKQLIGQIKERFSKNVEKWNEIEAGLP 405
            + MK LV GL S SKVDEAK+LI  +KE+F++NV+ WNE+EA LP
Sbjct: 361 FSVMKWLVNGLASRSKVDEAKELIAVVKEKFTRNVDLWNEVEAALP 402

[Close]
BLAST of Cp4.1LG20g03740 vs. Swiss-Prot
Match: PP352_ARATH (Pentatricopeptide repeat-containing protein At4g36680, mitochondrial OS=Arabidopsis thaliana GN=At4g36680 PE=2 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 3.7e-51
Identity = 126/392 (32.14%), Postives = 208/392 (53.06%), Query Frame = 1 

Query: 15  SSYINHRLHYRCLSTILSPDSTNPLSAKQKSRAALSLLKVEENPERIIDICRAATLTPES 74
           SS I+ RL  R  S      +T P S K     A S L+ E +P++ + I    +    S
Sbjct: 3   SSRISLRLVRRFASAAADGTTTAPSSGKISVSKAKSTLRKEHDPDKALKIYANVSDHSAS 62

Query: 75  HLD-RIAFSVAISKLSESKHFDGIRLFLEELKSRPDLKNERFACHAIILYGQANMLDHAI 134
            +  R A  + + +L++ + F  I   +E  K+ P +K E F    I  YGQA+M +HA+
Sbjct: 63  PVSSRYAQELTVRRLAKCRRFSDIETLIESHKNDPKIKEEPFYSTLIRSYGQASMFNHAM 122

Query: 135 RTFKQIDELGVRPSVKSLNALLFACNVAKDYKELKRVFMEFPKIYG-IEPDLDTYNRVIK 194
           RTF+Q+D+ G   S  S NALL AC  +K++ ++ ++F E P+ Y  I PD  +Y  +IK
Sbjct: 123 RTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIK 182

Query: 195 AFSKSGSASAVYSIVAEMDRKGVKPNATTFANWLAGCYKEEKYEDVEKVINLMGKYGVRR 254
           ++  SG+      I+ +M  KG++     F   L+  YK+ + E  + + N M K G   
Sbjct: 183 SYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCEL 242

Query: 255 GVSTYNARILSLCKLKKSSEAKALFDGMLSRGMKPNSVTYCKLIHGFCREGNLDEAKNLF 314
             + YN RI+S  K +     K L + M S G+KP++++Y  L+  +C  G LDEAK ++
Sbjct: 243 DNAAYNVRIMSAQK-ESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVY 302

Query: 315 KRMINSGCQPDSDCYFTLVYFHCRGGDYDTAFKICGESMEKGWVPNITTMKSLVYGLVSI 374
           + +  + C P++  + TL++  C    Y+  + I  +S+    +P+  T+K LV GLV  
Sbjct: 303 EGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVGLVEN 362

Query: 375 SKVDEAKQLIGQIKERFSKN-VEKWNEIEAGL 404
            K D+AK LI  +K++F  + +  W ++E  L
Sbjct: 363 KKRDDAKGLIRTVKKKFPPSFLNAWKKLEEEL 393

[Close]
BLAST of Cp4.1LG20g03740 vs. Swiss-Prot
Match: PP226_ARATH (Pentatricopeptide repeat-containing protein At3g13160, mitochondrial OS=Arabidopsis thaliana GN=At3g13160 PE=2 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 9.4e-47
Identity = 111/378 (29.37%), Postives = 196/378 (51.85%), Query Frame = 1 

Query: 5   YRLRNAFPSNSSYINHRLHYRCLSTILSPDSTNPLSAKQKSRAALSLLKVEENPERIIDI 64
           + LR  F S S++ N R      +   +P    P        + ++L+  E +P+ I + 
Sbjct: 7   FLLRGNF-SFSTHTNRRFFSAVTAAAATPSPPKP--------SLITLVNDERDPKFITEK 66

Query: 65  CRAATLTPESHLDRIAFSVAISKLSESKHFDGIRLFLEELKSRPDLKNERFACHAIILYG 124
            + A        +   +   + +L+ +K F+ +   LEE    P++  E F    I LYG
Sbjct: 67  FKKACQAEWFRKNIAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYG 126

Query: 125 QANMLDHAIRTFKQIDELGVRPSVKSLNALLFACNVAKDYKELKRVFMEFPKIYGIEPDL 184
           +  M ++A + F ++ E   + +  S NALL AC  +K +  ++ +F E P    IEPD+
Sbjct: 127 RVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDV 186

Query: 185 DTYNRVIKAFSKSGSASAVYSIVAEMDRKGVKPNATTFANWLAGCYKEEKYEDVEKVINL 244
            +YN +IK     GS +   +++ E++ KG+KP+  TF   L   Y + K+E+ E++   
Sbjct: 187 ASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWAR 246

Query: 245 MGKYGVRRGVSTYNARILSLCKLKKSSEAKALFDGMLSRGMKPNSVTYCKLIHGFCREGN 304
           M +  V+R + +YNAR+L L    KS E  +LFD +    +KP+  T+  +I GF  EG 
Sbjct: 247 MVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGK 306

Query: 305 LDEAKNLFKRMINSGCQPDSDCYFTLVYFHCRGGDYDTAFKICGESMEKGWVPNITTMKS 364
           LDEA   +K +  +GC+P    + +L+   C+ GD ++A+++C E   K  + +   ++ 
Sbjct: 307 LDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQE 366

Query: 365 LVYGLVSISKVDEAKQLI 383
           +V  LV  SK DEA++++
Sbjct: 367 VVDALVKGSKQDEAEEIV 375

[Close]
BLAST of Cp4.1LG20g03740 vs. Swiss-Prot
Match: PPR82_ARATH (Pentatricopeptide repeat-containing protein At1g55890, mitochondrial OS=Arabidopsis thaliana GN=At1g55890 PE=2 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.6e-46
Identity = 105/355 (29.58%), Postives = 190/355 (53.52%), Query Frame = 1 

Query: 28  STILSPDSTNPLSAKQKSRAALSLLKVEENPERIIDICRAATLTPESHLDRIAFSVAISK 87
           +T++S  +    +     ++  SL+  E NP+RI++  + A  +     +   +   + +
Sbjct: 24  ATVVSEPTAVTAAISPPQKSLTSLVNGERNPKRIVEKFKKACESERFRTNIAVYDRTVRR 83

Query: 88  LSESKHFDGIRLFLEELKSRPDLKNERFACHAIILYGQANMLDHAIRTFKQIDELGVRPS 147
           L  +K    +   LEE K   D+  E FA   I LYG+A M ++A + F+++     + S
Sbjct: 84  LVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFEEMPNRDCKRS 143

Query: 148 VKSLNALLFACNVAKDYKELKRVFMEFPKIYGIEPDLDTYNRVIKAFSKSGSASAVYSIV 207
           V S NALL A  ++K +  ++ +F E P    I+PD+ +YN +IKA  +  S     +++
Sbjct: 144 VLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALL 203

Query: 208 AEMDRKGVKPNATTFANWLAGCYKEEKYEDVEKVINLMGKYGVRRGVSTYNARILSLCKL 267
            E++ KG+KP+  TF   L   Y + ++E  E++   M +  V   + TYNAR+L L   
Sbjct: 204 DEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANE 263

Query: 268 KKSSEAKALFDGMLSRGMKPNSVTYCKLIHGFCREGNLDEAKNLFKRMINSGCQPDSDCY 327
            KS E   LF  + + G+KP+  ++  +I G   EG +DEA+  +K ++  G +PD   +
Sbjct: 264 AKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATF 323

Query: 328 FTLVYFHCRGGDYDTAFKICGESMEKGWVPNITTMKSLVYGLVSISKVDEAKQLI 383
             L+   C+ GD+++A ++  E+  K ++   TT++ LV  LV  SK +EA++++
Sbjct: 324 ALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEEIV 378

[Close]
BLAST of Cp4.1LG20g03740 vs. TrEMBL
Match: A0A0A0LRL9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G063590 PE=4 SV=1)

HSP 1 Score: 731.9 bits (1888), Expect = 4.3e-208
Identity = 359/405 (88.64%), Postives = 388/405 (95.80%), Query Frame = 1 

Query: 1   MALLYRLRNAFPSNSSYINHRLHYRCLSTILSPDSTNPLSAKQKSRAALSLLKVEENPER 60
           MALLYRLR+AFPSNS+YIN+RLHYR LSTILSPDS+NPLSAKQKSRAALSLLK EENPER
Sbjct: 1   MALLYRLRSAFPSNSTYINYRLHYRSLSTILSPDSSNPLSAKQKSRAALSLLKTEENPER 60

Query: 61  IIDICRAATLTPESHLDRIAFSVAISKLSESKHFDGIRLFLEELKSRPDLKNERFACHAI 120
           IIDICRAA+LTPE HLDRIAFSVAISKLS+ KHFDGIR FLEELKSRPDLKNERFACHAI
Sbjct: 61  IIDICRAASLTPEFHLDRIAFSVAISKLSKFKHFDGIRRFLEELKSRPDLKNERFACHAI 120

Query: 121 ILYGQANMLDHAIRTFKQIDELGVRPSVKSLNALLFACNVAKDYKELKRVFMEFPKIYGI 180
           +LYGQANMLDHAIRTFKQIDELGVR SVK+LNALLFACN+AKDYKELKRV+MEFPKIYGI
Sbjct: 121 VLYGQANMLDHAIRTFKQIDELGVRHSVKTLNALLFACNLAKDYKELKRVYMEFPKIYGI 180

Query: 181 EPDLDTYNRVIKAFSKSGSASAVYSIVAEMDRKGVKPNATTFANWLAGCYKEEKYEDVEK 240
           EPD+DTYNRVIKAFS+SGS+S+V SIVAEMDRK VKPNATTFANWLAGCY EEK+EDVEK
Sbjct: 181 EPDIDTYNRVIKAFSESGSSSSVSSIVAEMDRKDVKPNATTFANWLAGCYMEEKFEDVEK 240

Query: 241 VINLMGKYGVRRGVSTYNARILSLCKLKKSSEAKALFDGMLSRGMKPNSVTYCKLIHGFC 300
           V+NLM KYGVRRGV+TYNARI SLCKLK+S+EAKALFDGMLSRGM PNSVTYC+LIHGFC
Sbjct: 241 VLNLMEKYGVRRGVATYNARIRSLCKLKRSTEAKALFDGMLSRGMDPNSVTYCELIHGFC 300

Query: 301 REGNLDEAKNLFKRMINSGCQPDSDCYFTLVYFHCRGGDYDTAFKICGESMEKGWVPNIT 360
           +EGNLDEAK++FKRMINSGCQPDS+CYFTL YF CRGGDY+TAFKIC ESM+KGWVPN +
Sbjct: 301 KEGNLDEAKSIFKRMINSGCQPDSECYFTLTYFLCRGGDYETAFKICLESMKKGWVPNFS 360

Query: 361 TMKSLVYGLVSISKVDEAKQLIGQIKERFSKNVEKWNEIEAGLPQ 406
           TMKSLV GLVSISKV+EAKQLIGQIKERFSKNVEKW+EIEAGLPQ
Sbjct: 361 TMKSLVDGLVSISKVEEAKQLIGQIKERFSKNVEKWSEIEAGLPQ 405

[Close]
BLAST of Cp4.1LG20g03740 vs. TrEMBL
Match: A0A059CAY2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E04079 PE=4 SV=1)

HSP 1 Score: 565.1 bits (1455), Expect = 7.0e-158
Identity = 272/378 (71.96%), Postives = 320/378 (84.66%), Query Frame = 1 

Query: 28  STILSPDSTNPLSAKQKSRAALSLLKVEENPERIIDICRAATLTPESHLDRIAFSVAISK 87
           S+ILSPDS+ PLS+K+K+RAALSLLK E+NPERIIDICRAA+LTP+SHLDR+AFSVAISK
Sbjct: 29  SSILSPDSSAPLSSKEKTRAALSLLKAEKNPERIIDICRAASLTPQSHLDRVAFSVAISK 88

Query: 88  LSESKHFDGIRLFLEELKSRPDLKNERFACHAIILYGQANMLDHAIRTFKQIDELGVRPS 147
           L+ES +FDGIR FLEE K RPDL+NERF CHAI+LYGQA ML+ AI TFK ++ELG+R +
Sbjct: 89  LTESSYFDGIRRFLEESKGRPDLRNERFMCHAIVLYGQAGMLNEAIDTFKHVEELGIRRT 148

Query: 148 VKSLNALLFACNVAKDYKELKRVFMEFPKIYGIEPDLDTYNRVIKAFSKSGSASAVYSIV 207
           VKSLNALLFA  VAKD+KE KR+FMEFP+IY + PDL+T+N VIKAFS+S S S+ YS +
Sbjct: 149 VKSLNALLFASIVAKDFKETKRIFMEFPRIYSVAPDLETFNTVIKAFSESESTSSAYSAL 208

Query: 208 AEMDRKGVKPNATTFANWLAGCYKEEKYEDVEKVINLMGKYGVRRGVSTYNARILSLCKL 267
           AEMDRKGVKPNATTF   LAG YKEEKYEDV KV+ LM KYGV RGVS YN RI SLCKL
Sbjct: 209 AEMDRKGVKPNATTFGTMLAGFYKEEKYEDVGKVLELMQKYGVARGVSIYNIRIHSLCKL 268

Query: 268 KKSSEAKALFDGMLSRGMKPNSVTYCKLIHGFCREGNLDEAKNLFKRMINSGCQPDSDCY 327
           +KS EAK L DGML+RGMKPNS TY  LIHGFC E   DEAK +FK M+N GC+P SDCY
Sbjct: 269 RKSDEAKVLLDGMLARGMKPNSETYAHLIHGFCSEERYDEAKKMFKSMMNHGCRPTSDCY 328

Query: 328 FTLVYFHCRGGDYDTAFKICGESMEKGWVPNITTMKSLVYGLVSISKVDEAKQLIGQIKE 387
           FT +++ C+GG++DTA +IC ESMEKGW+PN  TMKSLV GLVSI KVDEA++LI Q+KE
Sbjct: 329 FTFIHYLCKGGEFDTALQICKESMEKGWIPNFGTMKSLVNGLVSIDKVDEARELIKQVKE 388

Query: 388 RFSKNVEKWNEIEAGLPQ 406
           RFS+N + W+E+EAGLPQ
Sbjct: 389 RFSRNTDLWDEVEAGLPQ 406

[Close]
BLAST of Cp4.1LG20g03740 vs. TrEMBL
Match: F6HRE2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0116g00030 PE=4 SV=1)

HSP 1 Score: 565.1 bits (1455), Expect = 7.0e-158
Identity = 280/405 (69.14%), Postives = 341/405 (84.20%), Query Frame = 1 

Query: 1   MALLYRLRNAFPSNSSYINHRLHYRCLSTILSPDSTNPLSAKQKSRAALSLLKVEENPER 60
           MA L RLR   P +S    HR  +   S+ILSPDS  PLS+K+KSRAALSLLK E++P+R
Sbjct: 1   MAFLSRLR---PISS----HRCRF--FSSILSPDSATPLSSKEKSRAALSLLKSEQDPQR 60

Query: 61  IIDICRAATLTPESHLDRIAFSVAISKLSESKHFDGIRLFLEELKSRPDLKNERFACHAI 120
           I++ICRAA LTPESHLDR+AFSVAISKL++SKHFD IR FL+ELK+RPDL+ ERF  HAI
Sbjct: 61  ILEICRAAALTPESHLDRVAFSVAISKLADSKHFDSIRHFLDELKARPDLRTERFVSHAI 120

Query: 121 ILYGQANMLDHAIRTFKQIDELGVRPSVKSLNALLFACNVAKDYKELKRVFMEFPKIYGI 180
           +L+GQA ML+ A+RTF+Q+ +LGV  +V+SLNALLF+C +AK+YKE  R+F+EFPK YGI
Sbjct: 121 VLFGQAGMLNDAVRTFEQMHQLGVDRTVRSLNALLFSCILAKNYKEANRIFLEFPKTYGI 180

Query: 181 EPDLDTYNRVIKAFSKSGSASAVYSIVAEMDRKGVKPNATTFANWLAGCYKEEKYEDVEK 240
           E +LD+YN V+KAFS+SGS+S+ YSI+AEM RKGVKPNAT+F   LAG Y EEKYEDV K
Sbjct: 181 ELNLDSYNTVLKAFSESGSSSSGYSILAEMGRKGVKPNATSFGILLAGFYNEEKYEDVGK 240

Query: 241 VINLMGKYGVRRGVSTYNARILSLCKLKKSSEAKALFDGMLSRGMKPNSVTYCKLIHGFC 300
           V+ +M +Y ++ G+STYN RI SLCKLKKSSEAKAL DG+L+R MKPNS TYC LIHGFC
Sbjct: 241 VLKMMEEYKMQPGISTYNIRIQSLCKLKKSSEAKALLDGILARRMKPNSETYCHLIHGFC 300

Query: 301 REGNLDEAKNLFKRMINSGCQPDSDCYFTLVYFHCRGGDYDTAFKICGESMEKGWVPNIT 360
           +EGNLDEAK LFK M+N GC+PDSDCYFTLVYF C+GGD+++A + C E MEKGW PNI+
Sbjct: 301 KEGNLDEAKKLFKDMVNRGCKPDSDCYFTLVYFLCQGGDFESALRFCKECMEKGWFPNIS 360

Query: 361 TMKSLVYGLVSISKVDEAKQLIGQIKERFSKNVEKWNEIEAGLPQ 406
           TM SLV GLVSISKV+EA++LIGQIKE+FS+NV+KWNEIEAGLPQ
Sbjct: 361 TMTSLVNGLVSISKVEEARELIGQIKEKFSRNVDKWNEIEAGLPQ 396

[Close]
BLAST of Cp4.1LG20g03740 vs. TrEMBL
Match: A5AGX1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027645 PE=4 SV=1)

HSP 1 Score: 564.7 bits (1454), Expect = 9.1e-158
Identity = 280/405 (69.14%), Postives = 341/405 (84.20%), Query Frame = 1 

Query: 1   MALLYRLRNAFPSNSSYINHRLHYRCLSTILSPDSTNPLSAKQKSRAALSLLKVEENPER 60
           MA L RLR   P +S    HR  +   S+ILSPDS  PLS+K+KSRAALSLLK E++P+R
Sbjct: 1   MAFLSRLR---PISS----HRCRF--FSSILSPDSATPLSSKEKSRAALSLLKSEQDPQR 60

Query: 61  IIDICRAATLTPESHLDRIAFSVAISKLSESKHFDGIRLFLEELKSRPDLKNERFACHAI 120
           I++ICRAA LTPESHLDR+AFSVAISKL++SKHFD IR FL+ELK+RPDL+ ERF  HAI
Sbjct: 61  ILEICRAAALTPESHLDRVAFSVAISKLADSKHFDSIRHFLDELKARPDLRTERFVSHAI 120

Query: 121 ILYGQANMLDHAIRTFKQIDELGVRPSVKSLNALLFACNVAKDYKELKRVFMEFPKIYGI 180
           +L+GQA ML+ A+RTF+Q+ +LGV  +V+SLNALLF+C +AK+YKE  R+F+EFPK YGI
Sbjct: 121 VLFGQAGMLNDAVRTFEQMHQLGVDRTVRSLNALLFSCILAKNYKEANRIFLEFPKTYGI 180

Query: 181 EPDLDTYNRVIKAFSKSGSASAVYSIVAEMDRKGVKPNATTFANWLAGCYKEEKYEDVEK 240
           E +LD+YN V+KAFS+SGS+S+ YSI+AEM RKGVKPNAT+F   LAG Y EEKYEDV K
Sbjct: 181 ELNLDSYNTVLKAFSESGSSSSGYSILAEMGRKGVKPNATSFGILLAGFYNEEKYEDVGK 240

Query: 241 VINLMGKYGVRRGVSTYNARILSLCKLKKSSEAKALFDGMLSRGMKPNSVTYCKLIHGFC 300
           V+ +M +Y ++ G+STYN RI SLCKLKKSSEAKAL DG+L+R MKPNS TYC LIHGFC
Sbjct: 241 VLKMMEEYKMQPGISTYNIRIQSLCKLKKSSEAKALLDGILARRMKPNSETYCHLIHGFC 300

Query: 301 REGNLDEAKNLFKRMINSGCQPDSDCYFTLVYFHCRGGDYDTAFKICGESMEKGWVPNIT 360
           +EGNLDEAK LFK M+N GC+PDSDCYFTLVYF C+GGD+++A + C E MEKGW PNI+
Sbjct: 301 KEGNLDEAKKLFKDMVNRGCKPDSDCYFTLVYFLCQGGDFESALRFCKECMEKGWFPNIS 360

Query: 361 TMKSLVYGLVSISKVDEAKQLIGQIKERFSKNVEKWNEIEAGLPQ 406
           TM SLV GLVSISKV+EA++LIGQIKE+FS+NV+KWNEIEAGLPQ
Sbjct: 361 TMTSLVNGLVSISKVEEAQELIGQIKEKFSRNVDKWNEIEAGLPQ 396

[Close]
BLAST of Cp4.1LG20g03740 vs. TrEMBL
Match: W9RQY2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_012870 PE=4 SV=1)

HSP 1 Score: 530.8 bits (1366), Expect = 1.5e-147
Identity = 259/405 (63.95%), Postives = 327/405 (80.74%), Query Frame = 1 

Query: 1   MALLYRLRNAFPSNSSYINHRLHYRCLSTILSPDSTNPLSAKQKSRAALSLLKVEENPER 60
           M+L+ RLR A  S+  +          ST+LSPDS  PLSAK+K+RAAL+L+K E+NP R
Sbjct: 1   MSLISRLRQASLSHCRF----------STLLSPDS-KPLSAKEKTRAALALIKTEKNPSR 60

Query: 61  IIDICRAATLTPESHLDRIAFSVAISKLSESKHFDGIRLFLEELKSRPDLKNERFACHAI 120
           I+++C+AA+LTPE++LDRI  SVA+SKL++S HFD IR FL++LK+R DLK ERF  H I
Sbjct: 61  IVELCKAASLTPETYLDRITLSVAVSKLADSNHFDAIRQFLDDLKTRADLKTERFVSHVI 120

Query: 121 ILYGQANMLDHAIRTFKQIDELGVRPSVKSLNALLFACNVAKDYKELKRVFMEFPKIYGI 180
           +LYGQA M+D A+R+FKQ DELGV  SV+ LN+L+FAC +AK+YKE   VF+EFPKIYGI
Sbjct: 121 VLYGQAKMIDCAVRSFKQCDELGVARSVRVLNSLIFACILAKNYKEANHVFVEFPKIYGI 180

Query: 181 EPDLDTYNRVIKAFSKSGSASAVYSIVAEMDRKGVKPNATTFANWLAGCYKEEKYEDVEK 240
           EPD+DTYN VI+AF++SGS SA YS++ EMDRKGVKPN+TTF N L G   EEK+EDV K
Sbjct: 181 EPDVDTYNWVIRAFAESGSTSAAYSVLGEMDRKGVKPNSTTFGNMLPGFSSEEKFEDVGK 240

Query: 241 VINLMGKYGVRRGVSTYNARILSLCKLKKSSEAKALFDGMLSRGMKPNSVTYCKLIHGFC 300
           VINLM KYGVR+G+STYN RI SLCK K++SEAKAL D M+SRGMKPNSV++  LI+G+C
Sbjct: 241 VINLMKKYGVRQGLSTYNIRIQSLCKRKRTSEAKALLDSMISRGMKPNSVSFNHLIYGYC 300

Query: 301 REGNLDEAKNLFKRMINSGCQPDSDCYFTLVYFHCRGGDYDTAFKICGESMEKGWVPNIT 360
           +EG L+EAK LFK M+  GC+P+S+CYFTLVYF C+G D+D A +IC ES+ K WVPN +
Sbjct: 301 KEGKLEEAKKLFKEMVYRGCKPESNCYFTLVYFMCQGKDFDAALEICKESIAKNWVPNFS 360

Query: 361 TMKSLVYGLVSISKVDEAKQLIGQIKERFSKNVEKWNEIEAGLPQ 406
           TMKSLV GLVS S+V EA++LI Q+KE+F+ NV+ WNEIEAGLPQ
Sbjct: 361 TMKSLVEGLVSASRVTEARELISQVKEKFTVNVDMWNEIEAGLPQ 394

[Close]
BLAST of Cp4.1LG20g03740 vs. TAIR10
Match: AT1G61870.1 (AT1G61870.1 pentatricopeptide repeat 336)

HSP 1 Score: 511.1 bits (1315), Expect = 6.1e-145
Identity = 250/409 (61.12%), Postives = 324/409 (79.22%), Query Frame = 1 

Query: 1   MALLYRLRNAFPSNSSYINHRLHYRCLS---TILSPDSTNPLSAKQKSRAALSLLKVEEN 60
           MALL R+R++  S   ++N     R LS   TILSPDS  PL++K+KS+AALSLLK E++
Sbjct: 1   MALLSRIRSS-TSLFRHLNASPQIRSLSSASTILSPDSKTPLTSKEKSKAALSLLKSEKD 60

Query: 61  PERIIDICRAATLTPESHLDRIAFSVAISKLSESKHFDGIRLFLEE-LKSRPDLKNERFA 120
           P+RI++ICRAA+LTP+  +DRIAFS A+  L+E KHF  +   L+  +++RPDLK+ERFA
Sbjct: 61  PDRILEICRAASLTPDCRIDRIAFSAAVENLAEKKHFSAVSNLLDGFIENRPDLKSERFA 120

Query: 121 CHAIILYGQANMLDHAIRTFKQIDELGVRPSVKSLNALLFACNVAKDYKELKRVFMEFPK 180
            HAI+LY QANMLDH++R F+ +++  +  +VKSLNALLFAC VAKDYKE KRV++E PK
Sbjct: 121 AHAIVLYAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPK 180

Query: 181 IYGIEPDLDTYNRVIKAFSKSGSASAVYSIVAEMDRKGVKPNATTFANWLAGCYKEEKYE 240
           +YGIEPDL+TYNR+IK F +SGSAS+ YSIVAEM+RKG+KPN+++F   ++G Y E+K +
Sbjct: 181 MYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSD 240

Query: 241 DVEKVINLMGKYGVRRGVSTYNARILSLCKLKKSSEAKALFDGMLSRGMKPNSVTYCKLI 300
           +V KV+ +M   GV  GVSTYN RI SLCK KKS EAKAL DGMLS GMKPN+VTY  LI
Sbjct: 241 EVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLI 300

Query: 301 HGFCREGNLDEAKNLFKRMINSGCQPDSDCYFTLVYFHCRGGDYDTAFKICGESMEKGWV 360
           HGFC E + +EAK LFK M+N GC+PDS+CYFTL+Y+ C+GGD++TA  +C ESMEK WV
Sbjct: 301 HGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWV 360

Query: 361 PNITTMKSLVYGLVSISKVDEAKQLIGQIKERFSKNVEKWNEIEAGLPQ 406
           P+ + MKSLV GL   SKV+EAK+LIGQ+KE+F++NVE WNE+EA LPQ
Sbjct: 361 PSFSIMKSLVNGLAKDSKVEEAKELIGQVKEKFTRNVELWNEVEAALPQ 408

[Close]
BLAST of Cp4.1LG20g03740 vs. TAIR10
Match: AT1G11630.1 (AT1G11630.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 441.0 bits (1133), Expect = 7.7e-124
Identity = 220/406 (54.19%), Postives = 301/406 (74.14%), Query Frame = 1 

Query: 1   MALLYRLRNAFPSNSSYINHRLHYRCLSTILSPDSTNPLSAKQK-SRAALSLLKVEENPE 60
           MA L+R+R    ++   +     +R  S+  S  +   L++KQK SR  LSLLK E NP+
Sbjct: 1   MAFLFRIR----TSEFILQKATQFRLKSSSSSIFTLKSLTSKQKKSRDTLSLLKSENNPD 60

Query: 61  RIIDICRAATLTPESHLDRIAFSVAISKLSESKHFDGIRLFLEE-LKSRPDLKNERFACH 120
           RI++ICR+ +L+P+ H+DRI FSVA+  L+  KHF  +   L+  ++++PD K+E FA  
Sbjct: 61  RILEICRSTSLSPDYHVDRIIFSVAVVTLAREKHFVAVSQLLDGFIQNQPDPKSESFAVR 120

Query: 121 AIILYGQANMLDHAIRTFKQIDELGVRPSVKSLNALLFACNVAKDYKELKRVFMEFPKIY 180
           AIILYG+ANMLD +I+TF+ +++  +  +VKSLNALLFAC +AKDYKE  RV++E PK+Y
Sbjct: 121 AIILYGRANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMY 180

Query: 181 GIEPDLDTYNRVIKAFSKSGSASAVYSIVAEMDRKGVKPNATTFANWLAGCYKEEKYEDV 240
           GIEPDL+TYNR+I+   +SGS S+ YSIVAEM+RK +KP A +F   + G YKEEK+++V
Sbjct: 181 GIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEV 240

Query: 241 EKVINLMGKYGVRRGVSTYNARILSLCKLKKSSEAKALFDGMLSRGMKPNSVTYCKLIHG 300
            KV+ +M ++GV  GV+TYN  I  LCK KKS+EAKAL DG++S  M+PNSVTY  LIHG
Sbjct: 241 RKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHG 300

Query: 301 FCREGNLDEAKNLFKRMINSGCQPDSDCYFTLVYFHCRGGDYDTAFKICGESMEKGWVPN 360
           FC E NLDEA NLF+ M+ +G +PDS+CYFTL++  C+GGD++TA  +C ESMEK WVP+
Sbjct: 301 FCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPS 360

Query: 361 ITTMKSLVYGLVSISKVDEAKQLIGQIKERFSKNVEKWNEIEAGLP 405
            + MK LV GL S SKVDEAK+LI  +KE+F++NV+ WNE+EA LP
Sbjct: 361 FSVMKWLVNGLASRSKVDEAKELIAVVKEKFTRNVDLWNEVEAALP 402

[Close]
BLAST of Cp4.1LG20g03740 vs. TAIR10
Match: AT4G36680.1 (AT4G36680.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 203.8 bits (517), Expect = 2.1e-52
Identity = 126/392 (32.14%), Postives = 208/392 (53.06%), Query Frame = 1 

Query: 15  SSYINHRLHYRCLSTILSPDSTNPLSAKQKSRAALSLLKVEENPERIIDICRAATLTPES 74
           SS I+ RL  R  S      +T P S K     A S L+ E +P++ + I    +    S
Sbjct: 3   SSRISLRLVRRFASAAADGTTTAPSSGKISVSKAKSTLRKEHDPDKALKIYANVSDHSAS 62

Query: 75  HLD-RIAFSVAISKLSESKHFDGIRLFLEELKSRPDLKNERFACHAIILYGQANMLDHAI 134
            +  R A  + + +L++ + F  I   +E  K+ P +K E F    I  YGQA+M +HA+
Sbjct: 63  PVSSRYAQELTVRRLAKCRRFSDIETLIESHKNDPKIKEEPFYSTLIRSYGQASMFNHAM 122

Query: 135 RTFKQIDELGVRPSVKSLNALLFACNVAKDYKELKRVFMEFPKIYG-IEPDLDTYNRVIK 194
           RTF+Q+D+ G   S  S NALL AC  +K++ ++ ++F E P+ Y  I PD  +Y  +IK
Sbjct: 123 RTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIK 182

Query: 195 AFSKSGSASAVYSIVAEMDRKGVKPNATTFANWLAGCYKEEKYEDVEKVINLMGKYGVRR 254
           ++  SG+      I+ +M  KG++     F   L+  YK+ + E  + + N M K G   
Sbjct: 183 SYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCEL 242

Query: 255 GVSTYNARILSLCKLKKSSEAKALFDGMLSRGMKPNSVTYCKLIHGFCREGNLDEAKNLF 314
             + YN RI+S  K +     K L + M S G+KP++++Y  L+  +C  G LDEAK ++
Sbjct: 243 DNAAYNVRIMSAQK-ESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVY 302

Query: 315 KRMINSGCQPDSDCYFTLVYFHCRGGDYDTAFKICGESMEKGWVPNITTMKSLVYGLVSI 374
           + +  + C P++  + TL++  C    Y+  + I  +S+    +P+  T+K LV GLV  
Sbjct: 303 EGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVGLVEN 362

Query: 375 SKVDEAKQLIGQIKERFSKN-VEKWNEIEAGL 404
            K D+AK LI  +K++F  + +  W ++E  L
Sbjct: 363 KKRDDAKGLIRTVKKKFPPSFLNAWKKLEEEL 393

[Close]
BLAST of Cp4.1LG20g03740 vs. TAIR10
Match: AT3G13160.1 (AT3G13160.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 189.1 bits (479), Expect = 5.3e-48
Identity = 111/378 (29.37%), Postives = 196/378 (51.85%), Query Frame = 1 

Query: 5   YRLRNAFPSNSSYINHRLHYRCLSTILSPDSTNPLSAKQKSRAALSLLKVEENPERIIDI 64
           + LR  F S S++ N R      +   +P    P        + ++L+  E +P+ I + 
Sbjct: 7   FLLRGNF-SFSTHTNRRFFSAVTAAAATPSPPKP--------SLITLVNDERDPKFITEK 66

Query: 65  CRAATLTPESHLDRIAFSVAISKLSESKHFDGIRLFLEELKSRPDLKNERFACHAIILYG 124
            + A        +   +   + +L+ +K F+ +   LEE    P++  E F    I LYG
Sbjct: 67  FKKACQAEWFRKNIAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYG 126

Query: 125 QANMLDHAIRTFKQIDELGVRPSVKSLNALLFACNVAKDYKELKRVFMEFPKIYGIEPDL 184
           +  M ++A + F ++ E   + +  S NALL AC  +K +  ++ +F E P    IEPD+
Sbjct: 127 RVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDV 186

Query: 185 DTYNRVIKAFSKSGSASAVYSIVAEMDRKGVKPNATTFANWLAGCYKEEKYEDVEKVINL 244
            +YN +IK     GS +   +++ E++ KG+KP+  TF   L   Y + K+E+ E++   
Sbjct: 187 ASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWAR 246

Query: 245 MGKYGVRRGVSTYNARILSLCKLKKSSEAKALFDGMLSRGMKPNSVTYCKLIHGFCREGN 304
           M +  V+R + +YNAR+L L    KS E  +LFD +    +KP+  T+  +I GF  EG 
Sbjct: 247 MVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGK 306

Query: 305 LDEAKNLFKRMINSGCQPDSDCYFTLVYFHCRGGDYDTAFKICGESMEKGWVPNITTMKS 364
           LDEA   +K +  +GC+P    + +L+   C+ GD ++A+++C E   K  + +   ++ 
Sbjct: 307 LDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQE 366

Query: 365 LVYGLVSISKVDEAKQLI 383
           +V  LV  SK DEA++++
Sbjct: 367 VVDALVKGSKQDEAEEIV 375

[Close]
BLAST of Cp4.1LG20g03740 vs. TAIR10
Match: AT1G55890.1 (AT1G55890.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 188.3 bits (477), Expect = 9.0e-48
Identity = 105/355 (29.58%), Postives = 190/355 (53.52%), Query Frame = 1 

Query: 28  STILSPDSTNPLSAKQKSRAALSLLKVEENPERIIDICRAATLTPESHLDRIAFSVAISK 87
           +T++S  +    +     ++  SL+  E NP+RI++  + A  +     +   +   + +
Sbjct: 24  ATVVSEPTAVTAAISPPQKSLTSLVNGERNPKRIVEKFKKACESERFRTNIAVYDRTVRR 83

Query: 88  LSESKHFDGIRLFLEELKSRPDLKNERFACHAIILYGQANMLDHAIRTFKQIDELGVRPS 147
           L  +K    +   LEE K   D+  E FA   I LYG+A M ++A + F+++     + S
Sbjct: 84  LVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFEEMPNRDCKRS 143

Query: 148 VKSLNALLFACNVAKDYKELKRVFMEFPKIYGIEPDLDTYNRVIKAFSKSGSASAVYSIV 207
           V S NALL A  ++K +  ++ +F E P    I+PD+ +YN +IKA  +  S     +++
Sbjct: 144 VLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALL 203

Query: 208 AEMDRKGVKPNATTFANWLAGCYKEEKYEDVEKVINLMGKYGVRRGVSTYNARILSLCKL 267
            E++ KG+KP+  TF   L   Y + ++E  E++   M +  V   + TYNAR+L L   
Sbjct: 204 DEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANE 263

Query: 268 KKSSEAKALFDGMLSRGMKPNSVTYCKLIHGFCREGNLDEAKNLFKRMINSGCQPDSDCY 327
            KS E   LF  + + G+KP+  ++  +I G   EG +DEA+  +K ++  G +PD   +
Sbjct: 264 AKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATF 323

Query: 328 FTLVYFHCRGGDYDTAFKICGESMEKGWVPNITTMKSLVYGLVSISKVDEAKQLI 383
             L+   C+ GD+++A ++  E+  K ++   TT++ LV  LV  SK +EA++++
Sbjct: 324 ALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEEIV 378

[Close]
BLAST of Cp4.1LG20g03740 vs. NCBI nr
Match: gi|778658444|ref|XP_011652746.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g61870, mitochondrial [Cucumis sativus])

HSP 1 Score: 731.9 bits (1888), Expect = 6.2e-208
Identity = 359/405 (88.64%), Postives = 388/405 (95.80%), Query Frame = 1 

Query: 1   MALLYRLRNAFPSNSSYINHRLHYRCLSTILSPDSTNPLSAKQKSRAALSLLKVEENPER 60
           MALLYRLR+AFPSNS+YIN+RLHYR LSTILSPDS+NPLSAKQKSRAALSLLK EENPER
Sbjct: 1   MALLYRLRSAFPSNSTYINYRLHYRSLSTILSPDSSNPLSAKQKSRAALSLLKTEENPER 60

Query: 61  IIDICRAATLTPESHLDRIAFSVAISKLSESKHFDGIRLFLEELKSRPDLKNERFACHAI 120
           IIDICRAA+LTPE HLDRIAFSVAISKLS+ KHFDGIR FLEELKSRPDLKNERFACHAI
Sbjct: 61  IIDICRAASLTPEFHLDRIAFSVAISKLSKFKHFDGIRRFLEELKSRPDLKNERFACHAI 120

Query: 121 ILYGQANMLDHAIRTFKQIDELGVRPSVKSLNALLFACNVAKDYKELKRVFMEFPKIYGI 180
           +LYGQANMLDHAIRTFKQIDELGVR SVK+LNALLFACN+AKDYKELKRV+MEFPKIYGI
Sbjct: 121 VLYGQANMLDHAIRTFKQIDELGVRHSVKTLNALLFACNLAKDYKELKRVYMEFPKIYGI 180

Query: 181 EPDLDTYNRVIKAFSKSGSASAVYSIVAEMDRKGVKPNATTFANWLAGCYKEEKYEDVEK 240
           EPD+DTYNRVIKAFS+SGS+S+V SIVAEMDRK VKPNATTFANWLAGCY EEK+EDVEK
Sbjct: 181 EPDIDTYNRVIKAFSESGSSSSVSSIVAEMDRKDVKPNATTFANWLAGCYMEEKFEDVEK 240

Query: 241 VINLMGKYGVRRGVSTYNARILSLCKLKKSSEAKALFDGMLSRGMKPNSVTYCKLIHGFC 300
           V+NLM KYGVRRGV+TYNARI SLCKLK+S+EAKALFDGMLSRGM PNSVTYC+LIHGFC
Sbjct: 241 VLNLMEKYGVRRGVATYNARIRSLCKLKRSTEAKALFDGMLSRGMDPNSVTYCELIHGFC 300

Query: 301 REGNLDEAKNLFKRMINSGCQPDSDCYFTLVYFHCRGGDYDTAFKICGESMEKGWVPNIT 360
           +EGNLDEAK++FKRMINSGCQPDS+CYFTL YF CRGGDY+TAFKIC ESM+KGWVPN +
Sbjct: 301 KEGNLDEAKSIFKRMINSGCQPDSECYFTLTYFLCRGGDYETAFKICLESMKKGWVPNFS 360

Query: 361 TMKSLVYGLVSISKVDEAKQLIGQIKERFSKNVEKWNEIEAGLPQ 406
           TMKSLV GLVSISKV+EAKQLIGQIKERFSKNVEKW+EIEAGLPQ
Sbjct: 361 TMKSLVDGLVSISKVEEAKQLIGQIKERFSKNVEKWSEIEAGLPQ 405

[Close]
BLAST of Cp4.1LG20g03740 vs. NCBI nr
Match: gi|659067768|ref|XP_008441198.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g61870, mitochondrial [Cucumis melo])

HSP 1 Score: 710.3 bits (1832), Expect = 1.9e-201
Identity = 351/405 (86.67%), Postives = 376/405 (92.84%), Query Frame = 1 

Query: 1   MALLYRLRNAFPSNSSYINHRLHYRCLSTILSPDSTNPLSAKQKSRAALSLLKVEENPER 60
           MALLYRLR+AF SNS+YIN+ LHYR LSTILSPDS+ PLSAKQKSRAALSLLK EENPER
Sbjct: 1   MALLYRLRSAFSSNSTYINYHLHYRSLSTILSPDSSTPLSAKQKSRAALSLLKTEENPER 60

Query: 61  IIDICRAATLTPESHLDRIAFSVAISKLSESKHFDGIRLFLEELKSRPDLKNERFACHAI 120
           IIDICRAA LTPE HLDRIAFSVAISKLS+SKH+DGI  FLEELKSRPDLKNERFACH I
Sbjct: 61  IIDICRAAALTPEFHLDRIAFSVAISKLSKSKHYDGIHRFLEELKSRPDLKNERFACHVI 120

Query: 121 ILYGQANMLDHAIRTFKQIDELGVRPSVKSLNALLFACNVAKDYKELKRVFMEFPKIYGI 180
            LYGQANMLDHAIRTFKQIDELGVR SVK LN+LLFACNVAKDYKELKRVFMEFPKIYGI
Sbjct: 121 ALYGQANMLDHAIRTFKQIDELGVRHSVKLLNSLLFACNVAKDYKELKRVFMEFPKIYGI 180

Query: 181 EPDLDTYNRVIKAFSKSGSASAVYSIVAEMDRKGVKPNATTFANWLAGCYKEEKYEDVEK 240
           EPD+DTYNRVIKAFS+SGS+S+V SIVAEMDRK VKPNAT+FANWLAGCY EEKYEDVEK
Sbjct: 181 EPDIDTYNRVIKAFSESGSSSSVSSIVAEMDRKNVKPNATSFANWLAGCYMEEKYEDVEK 240

Query: 241 VINLMGKYGVRRGVSTYNARILSLCKLKKSSEAKALFDGMLSRGMKPNSVTYCKLIHGFC 300
           V+ LM KYGVRRGV+TYNARI SLCKLKKS+EAKALFDGMLSRG KPN VTYC+LIHGF 
Sbjct: 241 VLKLMEKYGVRRGVATYNARIQSLCKLKKSAEAKALFDGMLSRGTKPNCVTYCELIHGFS 300

Query: 301 REGNLDEAKNLFKRMINSGCQPDSDCYFTLVYFHCRGGDYDTAFKICGESMEKGWVPNIT 360
           +EGNLDEAK+LFKRMINSGC+PDS+CYFTL+YF CRGGDY+TA KIC ESMEKGWVPN  
Sbjct: 301 KEGNLDEAKSLFKRMINSGCKPDSNCYFTLIYFLCRGGDYETALKICSESMEKGWVPNFG 360

Query: 361 TMKSLVYGLVSISKVDEAKQLIGQIKERFSKNVEKWNEIEAGLPQ 406
           TMKSLV GLVSISKV+EAKQLIGQIKERFS NVEKW+E+EAGLPQ
Sbjct: 361 TMKSLVDGLVSISKVEEAKQLIGQIKERFSNNVEKWSEMEAGLPQ 405

[Close]
BLAST of Cp4.1LG20g03740 vs. NCBI nr
Match: gi|702351964|ref|XP_010057943.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g61870, mitochondrial-like [Eucalyptus grandis])

HSP 1 Score: 565.1 bits (1455), Expect = 1.0e-157
Identity = 272/378 (71.96%), Postives = 320/378 (84.66%), Query Frame = 1 

Query: 28  STILSPDSTNPLSAKQKSRAALSLLKVEENPERIIDICRAATLTPESHLDRIAFSVAISK 87
           S+ILSPDS+ PLS+K+K+RAALSLLK E+NPERIIDICRAA+LTP+SHLDR+AFSVAISK
Sbjct: 29  SSILSPDSSAPLSSKEKTRAALSLLKAEKNPERIIDICRAASLTPQSHLDRVAFSVAISK 88

Query: 88  LSESKHFDGIRLFLEELKSRPDLKNERFACHAIILYGQANMLDHAIRTFKQIDELGVRPS 147
           L+ES +FDGIR FLEE K RPDL+NERF CHAI+LYGQA ML+ AI TFK ++ELG+R +
Sbjct: 89  LTESSYFDGIRRFLEESKGRPDLRNERFMCHAIVLYGQAGMLNEAIDTFKHVEELGIRRT 148

Query: 148 VKSLNALLFACNVAKDYKELKRVFMEFPKIYGIEPDLDTYNRVIKAFSKSGSASAVYSIV 207
           VKSLNALLFA  VAKD+KE KR+FMEFP+IY + PDL+T+N VIKAFS+S S S+ YS +
Sbjct: 149 VKSLNALLFASIVAKDFKETKRIFMEFPRIYSVAPDLETFNTVIKAFSESESTSSAYSAL 208

Query: 208 AEMDRKGVKPNATTFANWLAGCYKEEKYEDVEKVINLMGKYGVRRGVSTYNARILSLCKL 267
           AEMDRKGVKPNATTF   LAG YKEEKYEDV KV+ LM KYGV RGVS YN RI SLCKL
Sbjct: 209 AEMDRKGVKPNATTFGTMLAGFYKEEKYEDVGKVLELMQKYGVARGVSIYNIRIHSLCKL 268

Query: 268 KKSSEAKALFDGMLSRGMKPNSVTYCKLIHGFCREGNLDEAKNLFKRMINSGCQPDSDCY 327
           +KS EAK L DGML+RGMKPNS TY  LIHGFC E   DEAK +FK M+N GC+P SDCY
Sbjct: 269 RKSDEAKVLLDGMLARGMKPNSETYAHLIHGFCSEERYDEAKKMFKSMMNHGCRPTSDCY 328

Query: 328 FTLVYFHCRGGDYDTAFKICGESMEKGWVPNITTMKSLVYGLVSISKVDEAKQLIGQIKE 387
           FT +++ C+GG++DTA +IC ESMEKGW+PN  TMKSLV GLVSI KVDEA++LI Q+KE
Sbjct: 329 FTFIHYLCKGGEFDTALQICKESMEKGWIPNFGTMKSLVNGLVSIDKVDEARELIKQVKE 388

Query: 388 RFSKNVEKWNEIEAGLPQ 406
           RFS+N + W+E+EAGLPQ
Sbjct: 389 RFSRNTDLWDEVEAGLPQ 406

[Close]
BLAST of Cp4.1LG20g03740 vs. NCBI nr
Match: gi|731435181|ref|XP_003634851.2| (PREDICTED: pentatricopeptide repeat-containing protein At1g61870, mitochondrial-like [Vitis vinifera])

HSP 1 Score: 565.1 bits (1455), Expect = 1.0e-157
Identity = 280/405 (69.14%), Postives = 341/405 (84.20%), Query Frame = 1 

Query: 1   MALLYRLRNAFPSNSSYINHRLHYRCLSTILSPDSTNPLSAKQKSRAALSLLKVEENPER 60
           MA L RLR   P +S    HR  +   S+ILSPDS  PLS+K+KSRAALSLLK E++P+R
Sbjct: 27  MAFLSRLR---PISS----HRCRF--FSSILSPDSATPLSSKEKSRAALSLLKSEQDPQR 86

Query: 61  IIDICRAATLTPESHLDRIAFSVAISKLSESKHFDGIRLFLEELKSRPDLKNERFACHAI 120
           I++ICRAA LTPESHLDR+AFSVAISKL++SKHFD IR FL+ELK+RPDL+ ERF  HAI
Sbjct: 87  ILEICRAAALTPESHLDRVAFSVAISKLADSKHFDSIRHFLDELKARPDLRTERFVSHAI 146

Query: 121 ILYGQANMLDHAIRTFKQIDELGVRPSVKSLNALLFACNVAKDYKELKRVFMEFPKIYGI 180
           +L+GQA ML+ A+RTF+Q+ +LGV  +V+SLNALLF+C +AK+YKE  R+F+EFPK YGI
Sbjct: 147 VLFGQAGMLNDAVRTFEQMHQLGVDRTVRSLNALLFSCILAKNYKEANRIFLEFPKTYGI 206

Query: 181 EPDLDTYNRVIKAFSKSGSASAVYSIVAEMDRKGVKPNATTFANWLAGCYKEEKYEDVEK 240
           E +LD+YN V+KAFS+SGS+S+ YSI+AEM RKGVKPNAT+F   LAG Y EEKYEDV K
Sbjct: 207 ELNLDSYNTVLKAFSESGSSSSGYSILAEMGRKGVKPNATSFGILLAGFYNEEKYEDVGK 266

Query: 241 VINLMGKYGVRRGVSTYNARILSLCKLKKSSEAKALFDGMLSRGMKPNSVTYCKLIHGFC 300
           V+ +M +Y ++ G+STYN RI SLCKLKKSSEAKAL DG+L+R MKPNS TYC LIHGFC
Sbjct: 267 VLKMMEEYKMQPGISTYNIRIQSLCKLKKSSEAKALLDGILARRMKPNSETYCHLIHGFC 326

Query: 301 REGNLDEAKNLFKRMINSGCQPDSDCYFTLVYFHCRGGDYDTAFKICGESMEKGWVPNIT 360
           +EGNLDEAK LFK M+N GC+PDSDCYFTLVYF C+GGD+++A + C E MEKGW PNI+
Sbjct: 327 KEGNLDEAKKLFKDMVNRGCKPDSDCYFTLVYFLCQGGDFESALRFCKECMEKGWFPNIS 386

Query: 361 TMKSLVYGLVSISKVDEAKQLIGQIKERFSKNVEKWNEIEAGLPQ 406
           TM SLV GLVSISKV+EA++LIGQIKE+FS+NV+KWNEIEAGLPQ
Sbjct: 387 TMTSLVNGLVSISKVEEARELIGQIKEKFSRNVDKWNEIEAGLPQ 422

[Close]
BLAST of Cp4.1LG20g03740 vs. NCBI nr
Match: gi|147767812|emb|CAN77919.1| (hypothetical protein VITISV_027645 [Vitis vinifera])

HSP 1 Score: 564.7 bits (1454), Expect = 1.3e-157
Identity = 280/405 (69.14%), Postives = 341/405 (84.20%), Query Frame = 1 

Query: 1   MALLYRLRNAFPSNSSYINHRLHYRCLSTILSPDSTNPLSAKQKSRAALSLLKVEENPER 60
           MA L RLR   P +S    HR  +   S+ILSPDS  PLS+K+KSRAALSLLK E++P+R
Sbjct: 1   MAFLSRLR---PISS----HRCRF--FSSILSPDSATPLSSKEKSRAALSLLKSEQDPQR 60

Query: 61  IIDICRAATLTPESHLDRIAFSVAISKLSESKHFDGIRLFLEELKSRPDLKNERFACHAI 120
           I++ICRAA LTPESHLDR+AFSVAISKL++SKHFD IR FL+ELK+RPDL+ ERF  HAI
Sbjct: 61  ILEICRAAALTPESHLDRVAFSVAISKLADSKHFDSIRHFLDELKARPDLRTERFVSHAI 120

Query: 121 ILYGQANMLDHAIRTFKQIDELGVRPSVKSLNALLFACNVAKDYKELKRVFMEFPKIYGI 180
           +L+GQA ML+ A+RTF+Q+ +LGV  +V+SLNALLF+C +AK+YKE  R+F+EFPK YGI
Sbjct: 121 VLFGQAGMLNDAVRTFEQMHQLGVDRTVRSLNALLFSCILAKNYKEANRIFLEFPKTYGI 180

Query: 181 EPDLDTYNRVIKAFSKSGSASAVYSIVAEMDRKGVKPNATTFANWLAGCYKEEKYEDVEK 240
           E +LD+YN V+KAFS+SGS+S+ YSI+AEM RKGVKPNAT+F   LAG Y EEKYEDV K
Sbjct: 181 ELNLDSYNTVLKAFSESGSSSSGYSILAEMGRKGVKPNATSFGILLAGFYNEEKYEDVGK 240

Query: 241 VINLMGKYGVRRGVSTYNARILSLCKLKKSSEAKALFDGMLSRGMKPNSVTYCKLIHGFC 300
           V+ +M +Y ++ G+STYN RI SLCKLKKSSEAKAL DG+L+R MKPNS TYC LIHGFC
Sbjct: 241 VLKMMEEYKMQPGISTYNIRIQSLCKLKKSSEAKALLDGILARRMKPNSETYCHLIHGFC 300

Query: 301 REGNLDEAKNLFKRMINSGCQPDSDCYFTLVYFHCRGGDYDTAFKICGESMEKGWVPNIT 360
           +EGNLDEAK LFK M+N GC+PDSDCYFTLVYF C+GGD+++A + C E MEKGW PNI+
Sbjct: 301 KEGNLDEAKKLFKDMVNRGCKPDSDCYFTLVYFLCQGGDFESALRFCKECMEKGWFPNIS 360

Query: 361 TMKSLVYGLVSISKVDEAKQLIGQIKERFSKNVEKWNEIEAGLPQ 406
           TM SLV GLVSISKV+EA++LIGQIKE+FS+NV+KWNEIEAGLPQ
Sbjct: 361 TMTSLVNGLVSISKVEEAQELIGQIKEKFSRNVDKWNEIEAGLPQ 396

The following BLAST results are available for this feature:
BLAST of Cp4.1LG20g03740 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PPR87_ARATH1.1e-14361.12Pentatricopeptide repeat-containing protein At1g61870, mitochondrial OS=Arabidop... [more]
PPR33_ARATH1.4e-12254.19Pentatricopeptide repeat-containing protein At1g11630, mitochondrial OS=Arabidop... [more]
PP352_ARATH3.7e-5132.14Pentatricopeptide repeat-containing protein At4g36680, mitochondrial OS=Arabidop... [more]
PP226_ARATH9.4e-4729.37Pentatricopeptide repeat-containing protein At3g13160, mitochondrial OS=Arabidop... [more]
PPR82_ARATH1.6e-4629.58Pentatricopeptide repeat-containing protein At1g55890, mitochondrial OS=Arabidop... [more]
BLAST of Cp4.1LG20g03740 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LRL9_CUCSA4.3e-20888.64Uncharacterized protein OS=Cucumis sativus GN=Csa_1G063590 PE=4 SV=1[more]
A0A059CAY2_EUCGR7.0e-15871.96Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E04079 PE=4 SV=1[more]
F6HRE2_VITVI7.0e-15869.14Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0116g00030 PE=4 SV=... [more]
A5AGX1_VITVI9.1e-15869.14Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027645 PE=4 SV=1[more]
W9RQY2_9ROSA1.5e-14763.95Uncharacterized protein OS=Morus notabilis GN=L484_012870 PE=4 SV=1[more]
BLAST of Cp4.1LG20g03740 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G61870.16.1e-14561.12 pentatricopeptide repeat 336[more]
AT1G11630.17.7e-12454.19 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT4G36680.12.1e-5232.14 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G13160.15.3e-4829.37 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G55890.19.0e-4829.58 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
BLAST of Cp4.1LG20g03740 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778658444|ref|XP_011652746.1|6.2e-20888.64PREDICTED: pentatricopeptide repeat-containing protein At1g61870, mitochondrial ... [more]
gi|659067768|ref|XP_008441198.1|1.9e-20186.67PREDICTED: pentatricopeptide repeat-containing protein At1g61870, mitochondrial ... [more]
gi|702351964|ref|XP_010057943.1|1.0e-15771.96PREDICTED: pentatricopeptide repeat-containing protein At1g61870, mitochondrial-... [more]
gi|731435181|ref|XP_003634851.2|1.0e-15769.14PREDICTED: pentatricopeptide repeat-containing protein At1g61870, mitochondrial-... [more]
gi|147767812|emb|CAN77919.1|1.3e-15769.14hypothetical protein VITISV_027645 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006333 chromatin assembly or disassembly
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG20g03740.1Cp4.1LG20g03740.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 221..250
score:
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 253..301
score: 1.1
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 136..195
score: 2.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 256..289
score: 3.7E-7coord: 290..324
score: 1.0E-11coord: 329..359
score: 4.5E-4coord: 186..219
score: 2.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 77..107
score: 5.7coord: 323..357
score: 8.988coord: 183..217
score: 11.192coord: 112..146
score: 7.004coord: 218..252
score: 7.662coord: 253..287
score: 10.863coord: 147..182
score: 6.193coord: 288..322
score: 14.447coord: 358..388
score: 6
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 256..398
score: 4.8E-9coord: 39..164
score: 4.
IPR011990Tetratricopeptide-like helical domainunknownSSF48452TPR-likecoord: 72..395
score: 6.9
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 25..399
score: 3.6E
NoneNo IPR availablePANTHERPTHR24015:SF579SUBFAMILY NOT NAMEDcoord: 25..399
score: 3.6E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG20g03740Cucsa.085960Cucumber (Gy14) v1cgycpeB0159
Cp4.1LG20g03740CmaCh18G002480Cucurbita maxima (Rimu)cmacpeB442
Cp4.1LG20g03740CmoCh18G002800Cucurbita moschata (Rifu)cmocpeB403
Cp4.1LG20g03740CmoCh13G007550Cucurbita moschata (Rifu)cmocpeB201
Cp4.1LG20g03740Cla019393Watermelon (97103) v1cpewmB503
Cp4.1LG20g03740Csa1G063590Cucumber (Chinese Long) v2cpecuB506
Cp4.1LG20g03740ClCG03G004860Watermelon (Charleston Gray)cpewcgB463
Cp4.1LG20g03740CSPI01G10830Wild cucumber (PI 183967)cpecpiB506
Cp4.1LG20g03740Lsi02G006120Bottle gourd (USVL1VR-Ls)cpelsiB417
Cp4.1LG20g03740MELO3C007342.2Melon (DHL92) v3.6.1cpemedB572
Cp4.1LG20g03740CsaV3_1G010890Cucumber (Chinese Long) v3cpecucB0624
Cp4.1LG20g03740Bhi08G001523Wax gourdcpewgoB0637
Cp4.1LG20g03740CsGy1G010710Cucumber (Gy14) v2cgybcpeB070
Cp4.1LG20g03740Carg07537Silver-seed gourdcarcpeB1401
Cp4.1LG20g03740Carg06855Silver-seed gourdcarcpeB0697
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG20g03740Cp4.1LG09g09080Cucurbita pepo (Zucchini)cpecpeB048
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG20g03740Wax gourdcpewgoB0632
Cp4.1LG20g03740Wax gourdcpewgoB0655
Cp4.1LG20g03740Cucurbita pepo (Zucchini)cpecpeB086
Cp4.1LG20g03740Cucurbita pepo (Zucchini)cpecpeB412
Cp4.1LG20g03740Cucurbita pepo (Zucchini)cpecpeB437
Cp4.1LG20g03740Cucurbita pepo (Zucchini)cpecpeB445
Cp4.1LG20g03740Cucumber (Gy14) v1cgycpeB0040
Cp4.1LG20g03740Cucurbita maxima (Rimu)cmacpeB234
Cp4.1LG20g03740Cucurbita maxima (Rimu)cmacpeB677
Cp4.1LG20g03740Cucurbita maxima (Rimu)cmacpeB881
Cp4.1LG20g03740Cucurbita moschata (Rifu)cmocpeB443
Cp4.1LG20g03740Cucurbita moschata (Rifu)cmocpeB631
Cp4.1LG20g03740Cucurbita moschata (Rifu)cmocpeB818
Cp4.1LG20g03740Wild cucumber (PI 183967)cpecpiB527
Cp4.1LG20g03740Cucumber (Chinese Long) v2cpecuB525
Cp4.1LG20g03740Cucumber (Chinese Long) v2cpecuB526
Cp4.1LG20g03740Bottle gourd (USVL1VR-Ls)cpelsiB415
Cp4.1LG20g03740Watermelon (Charleston Gray)cpewcgB450
Cp4.1LG20g03740Watermelon (97103) v1cpewmB513
Cp4.1LG20g03740Melon (DHL92) v3.5.1cpemeB485
Cp4.1LG20g03740Melon (DHL92) v3.5.1cpemeB477
Cp4.1LG20g03740Cucumber (Gy14) v2cgybcpeB814
Cp4.1LG20g03740Melon (DHL92) v3.6.1cpemedB559
Cp4.1LG20g03740Melon (DHL92) v3.6.1cpemedB573
Cp4.1LG20g03740Silver-seed gourdcarcpeB0916
Cp4.1LG20g03740Silver-seed gourdcarcpeB1222
Cp4.1LG20g03740Silver-seed gourdcarcpeB1291
Cp4.1LG20g03740Cucumber (Chinese Long) v3cpecucB0650