Cucsa.085870 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTTTCTTTTTAAATATATTTTATTGGCCACCTAATTTTCTACCTGCGCCACGTAAGACCCCGTCGCGTCCACCGTGGCTCTTTCTCCGACGCGGTCTCTTTCCGTCCCTTCCCTTCCCCTTCCCCTTCCTTCTCTCTCTATTTAAACAAAAAATTTCCCCTAATTTCTAAATCCCAAAATCGAAATCATTTCGTAAACTCTCAAAAGAAGAAAAAGCAAGAAAGAAATCACAGTAATGGGCAACTGTTGCCGAAGCCAATCCTCTACGATGGTCTTCGCCGGTGATGATTGGGGCTCCTTCAGTTCCAAGCACGGGCGTGGTTGCGGCAGAAACGTTTCCGCTGCAACCTCCGGCGGCGATCCAGAGAAACATAGATTACTTGGAGAGAAGGAAGCGGGGTCGTGTTCGCAGCCGCTAGTGAAAATCAAGATGACGAAGAGAGAGCTTGAGGTTCTGGTGAAGAAGCTGGAGATGCAAGGATTGAGTCTAGAACAAGTTATTGGGCGGATGATGAAGGGTGAAGAAGAATTTGAAATCGAGCATCATCGATCATGGAGGCCTTCTCTTCAAAGCATTCCAGAGGATTACTGAATTGTGTGTAAAAAGAATCTATAGGGAAAGGAAATTTGTTGATTGGTTTTGTACAAAATTTGATCCCGCGTTGTTAGTTATATTGAGATTTGTTTTGGTTGTATATGAAAATTGGTTGCCGTATATTGTAAATTTTAGCGCAGATTTGCATTTATTGGAAGGTGGAGAATCATGTGAAGAAAGATTAAA TCTTTCTTTTTAAATATATTTTATTGGCCACCTAATTTTCTACCTGCGCCACGTAAGACCCCGTCGCGTCCACCGTGGCTCTTTCTCCGACGCGGtctctttccgtcccttcccttccccttccccttccttctctCTCTATTTAAACAAAAAATTTCCCCTAATTTCTAAATCCCAAAATCGAAATCATTTCGTAAACTCTCAAAAGAAGAAAAAGCAAGAAAGAAATCACAGTAATGGGCAACTGTTGCCGAAGCCAATCCTCTACGATGGTCTTCGCCGGTGATGATTGGGGCTCCTTCAGTTCCAAGCACGGGCGTGGTTGCGGCAGAAACGTTTCCGCTGCAACCTCCGGCGGCGATCCAGAGAAACATAGATTACTTGGAGAGAAGGAAGCGGGGTCGTGTTCGCAGCCGCTAGTGAAAATCAAGATGACGAAGAGAGAGCTTGAGGTTCTGGTGAAGAAGCTGGAGATGCAAGGATTGAGTCTAGAACAAGTTATTGGGCGGATGATGAAGGGTGAAGAAGAATTTGAAATCGAGCATCATCGATCATGGAGGCCTTCTCTTCAAAGCATTCCAGAGGATTACTGAATTGTGTGTAAAAAGAATCTATAGGGAAAGGAAATTTGTTGATTGGTTTTGTACAAAATTTGATCCCGCGTTGTTAGTTATATTGAGATTTGTTTTGGTTGTATATGAAAATTGGTTGCCGTATATTGTAAATTTTAGCGCAGATTTGCATTTATTGGAAGGTGGAGAATCATGTGAAGAAAGATTAAA ATGGGCAACTGTTGCCGAAGCCAATCCTCTACGATGGTCTTCGCCGGTGATGATTGGGGCTCCTTCAGTTCCAAGCACGGGCGTGGTTGCGGCAGAAACGTTTCCGCTGCAACCTCCGGCGGCGATCCAGAGAAACATAGATTACTTGGAGAGAAGGAAGCGGGGTCGTGTTCGCAGCCGCTAGTGAAAATCAAGATGACGAAGAGAGAGCTTGAGGTTCTGGTGAAGAAGCTGGAGATGCAAGGATTGAGTCTAGAACAAGTTATTGGGCGGATGATGAAGGGTGAAGAAGAATTTGAAATCGAGCATCATCGATCATGGAGGCCTTCTCTTCAAAGCATTCCAGAGGATTACTGA MGNCCRSQSSTMVFAGDDWGSFSSKHGRGCGRNVSAATSGGDPEKHRLLGEKEAGSCSQPLVKIKMTKRELEVLVKKLEMQGLSLEQVIGRMMKGEEEFEIEHHRSWRPSLQSIPEDY*
BLAST of Cucsa.085870 vs. TrEMBL
Match: A0A0A0LRL1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G063490 PE=4 SV=1) HSP 1 Score: 245.4 bits (625), Expect = 3.6e-62 Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 1
BLAST of Cucsa.085870 vs. TrEMBL
Match: B9RXL9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0904870 PE=4 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 7.9e-17 Identity = 57/134 (42.54%), Postives = 79/134 (58.96%), Query Frame = 1
BLAST of Cucsa.085870 vs. TrEMBL
Match: A0A061GFR6_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_030216 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 2.3e-16 Identity = 55/123 (44.72%), Postives = 75/123 (60.98%), Query Frame = 1
BLAST of Cucsa.085870 vs. TrEMBL
Match: B9H1B9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s01580g PE=4 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 3.9e-16 Identity = 51/121 (42.15%), Postives = 77/121 (63.64%), Query Frame = 1
BLAST of Cucsa.085870 vs. TrEMBL
Match: I1M107_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G205200 PE=4 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 4.3e-15 Identity = 60/135 (44.44%), Postives = 75/135 (55.56%), Query Frame = 1
BLAST of Cucsa.085870 vs. TAIR10
Match: AT4G21920.1 (AT4G21920.1 unknown protein) HSP 1 Score: 65.5 bits (158), Expect = 2.6e-11 Identity = 42/131 (32.06%), Postives = 74/131 (56.49%), Query Frame = 1
BLAST of Cucsa.085870 vs. NCBI nr
Match: gi|778658415|ref|XP_011652689.1| (PREDICTED: uncharacterized protein LOC105435046 [Cucumis sativus]) HSP 1 Score: 245.4 bits (625), Expect = 5.2e-62 Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 1
BLAST of Cucsa.085870 vs. NCBI nr
Match: gi|659068809|ref|XP_008446374.1| (PREDICTED: uncharacterized protein LOC103489132 [Cucumis melo]) HSP 1 Score: 198.7 bits (504), Expect = 5.6e-48 Identity = 99/108 (91.67%), Postives = 102/108 (94.44%), Query Frame = 1
BLAST of Cucsa.085870 vs. NCBI nr
Match: gi|255554901|ref|XP_002518488.1| (PREDICTED: uncharacterized protein LOC8284205 [Ricinus communis]) HSP 1 Score: 94.7 bits (234), Expect = 1.1e-16 Identity = 57/134 (42.54%), Postives = 79/134 (58.96%), Query Frame = 1
BLAST of Cucsa.085870 vs. NCBI nr
Match: gi|747095805|ref|XP_011095795.1| (PREDICTED: uncharacterized protein LOC105175147 [Sesamum indicum]) HSP 1 Score: 93.2 bits (230), Expect = 3.3e-16 Identity = 55/116 (47.41%), Postives = 76/116 (65.52%), Query Frame = 1
BLAST of Cucsa.085870 vs. NCBI nr
Match: gi|590626072|ref|XP_007026063.1| (Uncharacterized protein TCM_030216 [Theobroma cacao]) HSP 1 Score: 93.2 bits (230), Expect = 3.3e-16 Identity = 55/123 (44.72%), Postives = 75/123 (60.98%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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