CSPI01G10740 (gene) Wild cucumber (PI 183967)

NameCSPI01G10740
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionDUF4228 domain protein
LocationChr1 : 6728548 .. 6729418 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAATTCTTACGAGACTTTTAGGTATATATGTATTCTTTCTTTTTAAATATATTTTATTGGCCACCTAATTTTCTACCTGCGCCACGTAAGACCCCGTCGCGTCCACCGTGGCTCTTTCTCCGACGCGGTCTCTTTCCGTCCCTTCCCTTCCCCTTCCCCTTCCTTCTCTCTCTATTTAAACAAAAAATTTCCCCTAATTTCTAAATCCCAAAATCGAAATCATTTCGTAAACTCTCAAAAGAACAAAAAGCAAGAAAGAAATCACAGTAATGGGCAACTGTTGCCGAAGCCAATCCTCTACGATGGTCTTCGCCGGTGATGATTGGGGCTCCTTCAGTTCCAAGCACGGGCGTGGTTGCGGCAGAAACGGTTCCGCTGCAACCTCCGGCGGCGATCCAGAGAAACATAGATTACTTGGAGAGAAGGAAGCGGGGTCGTGTTCGCAGCCGCTAGTGAAAATCAAGATGACGAAGAGAGAGCTTGAGGTTCTGGTGAAGAAGCTGGAGATGCAAGGATTGAGTCTAGAACAAGTTATTGGGCGGATGATGAAGGGTGAAGAAGAATTTGAAATCGAGCATCATCGATCATGGAGGCCTTCTCTTCAAAGCATTCCAGAGGATTACTGATTGTGTGTAAAAAGAATCTATAGGGAAAGGAAATTTGTTGATTGGTTTTGTACAAAATTTGATCCCGCGTTGTTAGTTATATTGAGATTTGTTTTGGTTGTATATGAAAATTGGTTGCCGTATATTTGTAAATTTTAGCGCAGATTTGCATTTATTGGAAGGTGGAGAATCATGTGAAGAAAGATTAAAGATGAATTTCAGATTTCTTTTCTTCTCTTTTCTTATTAGTCAACTTTATATGTTG

mRNA sequence

ATGGGCAACTGTTGCCGAAGCCAATCCTCTACGATGGTCTTCGCCGGTGATGATTGGGGCTCCTTCAGTTCCAAGCACGGGCGTGGTTGCGGCAGAAACGGTTCCGCTGCAACCTCCGGCGGCGATCCAGAGAAACATAGATTACTTGGAGAGAAGGAAGCGGGGTCGTGTTCGCAGCCGCTAGTGAAAATCAAGATGACGAAGAGAGAGCTTGAGGTTCTGGTGAAGAAGCTGGAGATGCAAGGATTGAGTCTAGAACAAGTTATTGGGCGGATGATGAAGGGTGAAGAAGAATTTGAAATCGAGCATCATCGATCATGGAGGCCTTCTCTTCAAAGCATTCCAGAGGATTACTGA

Coding sequence (CDS)

ATGGGCAACTGTTGCCGAAGCCAATCCTCTACGATGGTCTTCGCCGGTGATGATTGGGGCTCCTTCAGTTCCAAGCACGGGCGTGGTTGCGGCAGAAACGGTTCCGCTGCAACCTCCGGCGGCGATCCAGAGAAACATAGATTACTTGGAGAGAAGGAAGCGGGGTCGTGTTCGCAGCCGCTAGTGAAAATCAAGATGACGAAGAGAGAGCTTGAGGTTCTGGTGAAGAAGCTGGAGATGCAAGGATTGAGTCTAGAACAAGTTATTGGGCGGATGATGAAGGGTGAAGAAGAATTTGAAATCGAGCATCATCGATCATGGAGGCCTTCTCTTCAAAGCATTCCAGAGGATTACTGA
BLAST of CSPI01G10740 vs. TrEMBL
Match: A0A0A0LRL1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G063490 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 4.9e-59
Identity = 117/118 (99.15%), Postives = 117/118 (99.15%), Query Frame = 1

Query: 1   MGNCCRSQSSTMVFAGDDWGSFSSKHGRGCGRNGSAATSGGDPEKHRLLGEKEAGSCSQP 60
           MGNCCRSQSSTMVFAGDDWGSFSSKHGRGCGRN SAATSGGDPEKHRLLGEKEAGSCSQP
Sbjct: 1   MGNCCRSQSSTMVFAGDDWGSFSSKHGRGCGRNVSAATSGGDPEKHRLLGEKEAGSCSQP 60

Query: 61  LVKIKMTKRELEVLVKKLEMQGLSLEQVIGRMMKGEEEFEIEHHRSWRPSLQSIPEDY 119
           LVKIKMTKRELEVLVKKLEMQGLSLEQVIGRMMKGEEEFEIEHHRSWRPSLQSIPEDY
Sbjct: 61  LVKIKMTKRELEVLVKKLEMQGLSLEQVIGRMMKGEEEFEIEHHRSWRPSLQSIPEDY 118

BLAST of CSPI01G10740 vs. TrEMBL
Match: B9H1B9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s01580g PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 7.4e-15
Identity = 53/121 (43.80%), Postives = 81/121 (66.94%), Query Frame = 1

Query: 1   MGNCCRSQSSTMVFAGDDWGSFSS-KHGRGCGRNGSA--ATSGGDPEKHRLLGEKEAGSC 60
           MGNCC+S SS++V+A DDW S +  KH      +G+      G + E+ RLLG     S 
Sbjct: 1   MGNCCKSASSSVVWADDDWASVAHHKHHHAAMFDGADDHEEHGTNMERQRLLGTGSLSSG 60

Query: 61  SQPLVKIKMTKRELEVLVKKLEMQGLSLEQVIGRMMKGEE-EFEIE-HHRSWRPSLQSIP 117
           S   VKI++TKRELE ++ ++ +QGLS+EQV+G ++   + +FE++ +H+ W+P+LQSIP
Sbjct: 61  STREVKIRITKRELEEIMARVSIQGLSMEQVLGMLVNSTDLKFEMDLNHKHWKPALQSIP 120

BLAST of CSPI01G10740 vs. TrEMBL
Match: B9RXL9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0904870 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 7.4e-15
Identity = 56/131 (42.75%), Postives = 77/131 (58.78%), Query Frame = 1

Query: 1   MGNCCR--SQSSTMVFAGDDWGSFSSKHGRGCGRNGSAATSGGDPEKHRLLGEK------ 60
           MGNCCR  S SS++V+AGDDWGS   +       +     +    E+ RLLGE       
Sbjct: 1   MGNCCRRVSSSSSVVWAGDDWGSVGQEKISSSDHSHHHDIT----ERQRLLGEDLDMMGG 60

Query: 61  --EAGSCSQPLVKIKMTKRELEVLVKKLEMQGLSLEQVIGRMMKGEE-----EFEIEHHR 117
              + S S   VKIK+TK+ELE L+ +++MQGLS+E+V+  ++         E E  HHR
Sbjct: 61  FMSSSSSSTREVKIKITKKELEELMARVDMQGLSMEEVLASLINSSSADKNLEMECHHHR 120

BLAST of CSPI01G10740 vs. TrEMBL
Match: A0A061GFR6_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_030216 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.6e-14
Identity = 56/121 (46.28%), Postives = 74/121 (61.16%), Query Frame = 1

Query: 1   MGNCCRSQSSTMVFAGDDWGSFSSKHGRGCGRNGSAATSGGDPEKHRLLGEKEAGSCSQP 60
           MGNC R   ++  +  DDWGS +S H R    +G         EK  LLG K   S S  
Sbjct: 1   MGNCLRHGKAS--WDDDDWGSLASTH-RQEDDDGEVINI---TEKESLLGAKRVASLSSS 60

Query: 61  L-----VKIKMTKRELEVLVKKLEMQGLSLEQVIGRMMKGEEEFEIEHHRSWRPSLQSIP 117
                 VKI ++K+ELE LV+K++MQGL+LEQV+  M+KG + +E+EHHR W+P LQSIP
Sbjct: 61  SPSTREVKITISKKELEQLVRKVDMQGLTLEQVLVSMVKGGDVYELEHHRPWKPVLQSIP 115

BLAST of CSPI01G10740 vs. TrEMBL
Match: I1M107_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G205200 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 4.0e-13
Identity = 60/135 (44.44%), Postives = 75/135 (55.56%), Query Frame = 1

Query: 1   MGNCCRS--QSSTMVFAGDDWGSFSSKHGRGCGRNGSA-----ATSGGDPEKHRLLGEKE 60
           MGNCC S  +SS+M + GDDWGSFSS   R   R           S G+ EK +LLG   
Sbjct: 1   MGNCCASATESSSMDWGGDDWGSFSSSKRRRSSRKNKVFDEVHGESLGNVEKEKLLGALR 60

Query: 61  AGSCSQPLVKIKMTKRELEVLVKKLE----MQG----LSLEQVIGRMMKGEE----EFEI 117
           A S +   VKIK++K+ELE L+   E     QG     S EQV+ R++   +    E+  
Sbjct: 61  ASSDANGKVKIKISKKELEKLLGGKENNSNKQGDHGHASAEQVLARLIHARDHASNEYHD 120

BLAST of CSPI01G10740 vs. TAIR10
Match: AT4G21920.1 (AT4G21920.1 unknown protein)

HSP 1 Score: 58.5 bits (140), Expect = 3.2e-09
Identity = 39/131 (29.77%), Postives = 73/131 (55.73%), Query Frame = 1

Query: 1   MGNC-CRSQSSTMVFAGDDWGSFSSKHGRGCGRNGSAATSGGDPEKHRLLGE-------K 60
           MGNC C ++ +T  ++GDD GS++ +  R      S      + +  +LLGE        
Sbjct: 1   MGNCICVTEKTTTSWSGDDNGSYNKRRRR----RRSTVVHDDNDDGEKLLGETSNVTSTS 60

Query: 61  EAGSCSQPLVKIKMTKRELEVLVKKLEMQGLSLEQVIGRMM-KGEEEFEI------EHHR 117
            + S  +  +KI++TK+ELE L++ + ++ L+ E+++ +++ +G ++          HH+
Sbjct: 61  SSSSSERREIKIRITKKELEDLMRNIGLKSLTAEEILSKLIFEGGDQIGFSAVDVTNHHQ 120

BLAST of CSPI01G10740 vs. NCBI nr
Match: gi|778658415|ref|XP_011652689.1| (PREDICTED: uncharacterized protein LOC105435046 [Cucumis sativus])

HSP 1 Score: 235.0 bits (598), Expect = 7.0e-59
Identity = 117/118 (99.15%), Postives = 117/118 (99.15%), Query Frame = 1

Query: 1   MGNCCRSQSSTMVFAGDDWGSFSSKHGRGCGRNGSAATSGGDPEKHRLLGEKEAGSCSQP 60
           MGNCCRSQSSTMVFAGDDWGSFSSKHGRGCGRN SAATSGGDPEKHRLLGEKEAGSCSQP
Sbjct: 1   MGNCCRSQSSTMVFAGDDWGSFSSKHGRGCGRNVSAATSGGDPEKHRLLGEKEAGSCSQP 60

Query: 61  LVKIKMTKRELEVLVKKLEMQGLSLEQVIGRMMKGEEEFEIEHHRSWRPSLQSIPEDY 119
           LVKIKMTKRELEVLVKKLEMQGLSLEQVIGRMMKGEEEFEIEHHRSWRPSLQSIPEDY
Sbjct: 61  LVKIKMTKRELEVLVKKLEMQGLSLEQVIGRMMKGEEEFEIEHHRSWRPSLQSIPEDY 118

BLAST of CSPI01G10740 vs. NCBI nr
Match: gi|659068809|ref|XP_008446374.1| (PREDICTED: uncharacterized protein LOC103489132 [Cucumis melo])

HSP 1 Score: 193.0 bits (489), Expect = 3.0e-46
Identity = 99/108 (91.67%), Postives = 103/108 (95.37%), Query Frame = 1

Query: 12  MVFAGDDWGSFSSKHGRGCGRNGSAATSGGDPEKHRLLG-EKEAGSCSQPLVKIKMTKRE 71
           MVFAGDDWGSFSSKHGRGCG  G+A TSGGDPEKHRLLG +KEA SCSQPLVKIKMTKRE
Sbjct: 1   MVFAGDDWGSFSSKHGRGCG--GNATTSGGDPEKHRLLGDQKEAASCSQPLVKIKMTKRE 60

Query: 72  LEVLVKKLEMQGLSLEQVIGRMMKGEEEFEIEHHRSWRPSLQSIPEDY 119
           LEVLVKKLEMQGL+LEQVIGRMMKGEEE+EIEHHRSWRPSLQSIPEDY
Sbjct: 61  LEVLVKKLEMQGLTLEQVIGRMMKGEEEYEIEHHRSWRPSLQSIPEDY 106

BLAST of CSPI01G10740 vs. NCBI nr
Match: gi|255554901|ref|XP_002518488.1| (PREDICTED: uncharacterized protein LOC8284205 [Ricinus communis])

HSP 1 Score: 88.2 bits (217), Expect = 1.1e-14
Identity = 56/131 (42.75%), Postives = 77/131 (58.78%), Query Frame = 1

Query: 1   MGNCCR--SQSSTMVFAGDDWGSFSSKHGRGCGRNGSAATSGGDPEKHRLLGEK------ 60
           MGNCCR  S SS++V+AGDDWGS   +       +     +    E+ RLLGE       
Sbjct: 1   MGNCCRRVSSSSSVVWAGDDWGSVGQEKISSSDHSHHHDIT----ERQRLLGEDLDMMGG 60

Query: 61  --EAGSCSQPLVKIKMTKRELEVLVKKLEMQGLSLEQVIGRMMKGEE-----EFEIEHHR 117
              + S S   VKIK+TK+ELE L+ +++MQGLS+E+V+  ++         E E  HHR
Sbjct: 61  FMSSSSSSTREVKIKITKKELEELMARVDMQGLSMEEVLASLINSSSADKNLEMECHHHR 120

BLAST of CSPI01G10740 vs. NCBI nr
Match: gi|224076238|ref|XP_002304911.1| (hypothetical protein POPTR_0004s01580g [Populus trichocarpa])

HSP 1 Score: 88.2 bits (217), Expect = 1.1e-14
Identity = 53/121 (43.80%), Postives = 81/121 (66.94%), Query Frame = 1

Query: 1   MGNCCRSQSSTMVFAGDDWGSFSS-KHGRGCGRNGSA--ATSGGDPEKHRLLGEKEAGSC 60
           MGNCC+S SS++V+A DDW S +  KH      +G+      G + E+ RLLG     S 
Sbjct: 1   MGNCCKSASSSVVWADDDWASVAHHKHHHAAMFDGADDHEEHGTNMERQRLLGTGSLSSG 60

Query: 61  SQPLVKIKMTKRELEVLVKKLEMQGLSLEQVIGRMMKGEE-EFEIE-HHRSWRPSLQSIP 117
           S   VKI++TKRELE ++ ++ +QGLS+EQV+G ++   + +FE++ +H+ W+P+LQSIP
Sbjct: 61  STREVKIRITKRELEEIMARVSIQGLSMEQVLGMLVNSTDLKFEMDLNHKHWKPALQSIP 120

BLAST of CSPI01G10740 vs. NCBI nr
Match: gi|747095805|ref|XP_011095795.1| (PREDICTED: uncharacterized protein LOC105175147 [Sesamum indicum])

HSP 1 Score: 87.4 bits (215), Expect = 1.8e-14
Identity = 56/116 (48.28%), Postives = 74/116 (63.79%), Query Frame = 1

Query: 1   MGNCCRSQSSTMVFAGDDWGSFSSKHGRGCGRNGSAATSGGDPEKHRLLGEKEAGSCSQP 60
           MGNC R + S   + G+DWGSF+S  G   G  G   +     +K  LLGE + G  S  
Sbjct: 1   MGNCIR-KGSAAEWGGEDWGSFAS--GDKTGTRGDLYSHSLGVQKKSLLGESD-GVLSST 60

Query: 61  LVKIKMTKRELEVLVKKLEMQGLSLEQVIGRMMKGEEEFEIEHHRSWRPSLQSIPE 117
            VKIK++K+ELE LVKK + QGLS++QV+ ++M   + FE  H RSWRP+LQSIPE
Sbjct: 61  EVKIKISKKELEQLVKKADAQGLSVQQVLAQLMDVGDRFE-AHQRSWRPALQSIPE 111

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LRL1_CUCSA4.9e-5999.15Uncharacterized protein OS=Cucumis sativus GN=Csa_1G063490 PE=4 SV=1[more]
B9H1B9_POPTR7.4e-1543.80Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s01580g PE=4 SV=1[more]
B9RXL9_RICCO7.4e-1542.75Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0904870 PE=4 SV=1[more]
A0A061GFR6_THECC1.6e-1446.28Uncharacterized protein OS=Theobroma cacao GN=TCM_030216 PE=4 SV=1[more]
I1M107_SOYBN4.0e-1344.44Uncharacterized protein OS=Glycine max GN=GLYMA_13G205200 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G21920.13.2e-0929.77 unknown protein[more]
Match NameE-valueIdentityDescription
gi|778658415|ref|XP_011652689.1|7.0e-5999.15PREDICTED: uncharacterized protein LOC105435046 [Cucumis sativus][more]
gi|659068809|ref|XP_008446374.1|3.0e-4691.67PREDICTED: uncharacterized protein LOC103489132 [Cucumis melo][more]
gi|255554901|ref|XP_002518488.1|1.1e-1442.75PREDICTED: uncharacterized protein LOC8284205 [Ricinus communis][more]
gi|224076238|ref|XP_002304911.1|1.1e-1443.80hypothetical protein POPTR_0004s01580g [Populus trichocarpa][more]
gi|747095805|ref|XP_011095795.1|1.8e-1448.28PREDICTED: uncharacterized protein LOC105175147 [Sesamum indicum][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G10740.1CSPI01G10740.1mRNA


Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 61..81
scor
NoneNo IPR availablePANTHERPTHR33647FAMILY NOT NAMEDcoord: 2..116
score: 1.2
NoneNo IPR availablePANTHERPTHR33647:SF4SUBFAMILY NOT NAMEDcoord: 2..116
score: 1.2

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI01G10740Cla019385Watermelon (97103) v1cpiwmB010
CSPI01G10740Cla014457Watermelon (97103) v1cpiwmB043
CSPI01G10740Csa1G063490Cucumber (Chinese Long) v2cpicuB000
CSPI01G10740Csa6G514300Cucumber (Chinese Long) v2cpicuB044
CSPI01G10740MELO3C002460Melon (DHL92) v3.5.1cpimeB024
CSPI01G10740ClCG03G004770Watermelon (Charleston Gray)cpiwcgB038
CSPI01G10740ClCG01G022040Watermelon (Charleston Gray)cpiwcgB016
CSPI01G10740Lsi02G006040Bottle gourd (USVL1VR-Ls)cpilsiB021
CSPI01G10740MELO3C007385.2Melon (DHL92) v3.6.1cpimedB076
CSPI01G10740MELO3C002460.2Melon (DHL92) v3.6.1cpimedB023
CSPI01G10740CsaV3_1G010810Cucumber (Chinese Long) v3cpicucB001
CSPI01G10740CsaV3_6G049100Cucumber (Chinese Long) v3cpicucB051
CSPI01G10740Cla97C05G095570Watermelon (97103) v2cpiwmbB061
CSPI01G10740Cla97C01G021680Watermelon (97103) v2cpiwmbB001
CSPI01G10740Cla97C03G055920Watermelon (97103) v2cpiwmbB032
CSPI01G10740Bhi08G001513Wax gourdcpiwgoB033
CSPI01G10740Bhi03G000438Wax gourdcpiwgoB023
CSPI01G10740Cucsa.085870Cucumber (Gy14) v1cgycpiB090
CSPI01G10740Cucsa.045280Cucumber (Gy14) v1cgycpiB016
CSPI01G10740CmaCh03G005330Cucurbita maxima (Rimu)cmacpiB656
CSPI01G10740CmaCh09G009520Cucurbita maxima (Rimu)cmacpiB009
CSPI01G10740CmoCh03G005570Cucurbita moschata (Rifu)cmocpiB648
CSPI01G10740Cp4.1LG20g03500Cucurbita pepo (Zucchini)cpecpiB506
CSPI01G10740Cp4.1LG10g09660Cucurbita pepo (Zucchini)cpecpiB050
CSPI01G10740CsGy6G033170Cucumber (Gy14) v2cgybcpiB247
CSPI01G10740CsGy1G010640Cucumber (Gy14) v2cgybcpiB001
CSPI01G10740Carg07545Silver-seed gourdcarcpiB1044
CSPI01G10740Carg13700Silver-seed gourdcarcpiB0968
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CSPI01G10740CSPI06G33620Wild cucumber (PI 183967)cpicpiB038