Cucsa.077160 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.077160
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Myb transcription factor
Location	scaffold00791 : 298388 .. 299592 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGATAGTTCTGGAGATCATAATAATTATAATAATAATCTTCATGTTAATTATCATGATCAATATAAATCTTCTTGTCCAAGAGGCCATTGGAGACCTGCTGAAGATGAAAAaCTTCGTCAATTGGTTGAACAATATGGTGCTCAAAATTGGAATTCCATTGCTGAGAAACTTCAAGGCAGATCAGGTACTTTTtATTCATCTAAAATTTTCCATCTGGCCTCTCTCTCTCTGGTTTGAAATTAGAAGGTCCACCCAAATTCATTAATTTTTTtAAAAAACTTCTCTCTAATTTGTTCTTATGATCAATTTAAATTTCTATTGATTTCTCAATCATTTTtGTTTtGTTTTGTTATTTTTCTCTTTAACCGATCGAGGATGTTTATGTGTTTGGAGTAATTGTACGGACCAATAAAGTTGGTAAAATAACTAAAACAAGTAAATTAAACCAAACCCACTTAAAAAaTAGGGTAAATTGAGTAAAGGGTTTGTCTTTAAAAAGGGTTAAATTTCTAAATTTGTTATCTCAATTTCATAAATCCTTCAATTTTGATGTTAATAAAGAAACAAAAATTAGCTTATTGTTTTTTTTCTTCAATAAACTGAAGTGAGAGATTCAAATAAAAAAAaTCTTTTGATCATGTTTGAAATTTTCTAATTTTGTTATACTGAATATATGAACCACAAACCTGAAGATGGTCGTTAGTTTATGCTAGTTGAAGTATATAAAGCTAATATGGATTGGTATTTTTGTTGTTTGATTTTGTTAGGAAAGAGTTGTAGATTGAGATGGTTTAATCAACTAGACCCAAGAATAATCAGAAAGCCATTTAGTGAAGAAGAAGAGGAAAGATTATTGGGAGCTCATAGAATACATGGAAATAAATGGTCACTTATAGCAAGACTATTTCCAGGTAGAACTGATAATGCTGTGAAGAATCATTGGCATGTTATTATGGCAAGAAAGCAAAGAGAACAATCAAAACTTTGTGGCAACAAAAGAACTTATCAACAATTTTCAAATTTAATTCTCAACAACAACCAAATTACAACACAATCTTCATCCTCAACAACAAATCATCATCATCATCATCATCATCATCCTCAACTTACAACAACTACAATTCTTGTTTCTGACTACAACAACAACAACAGCAACAGCAAAGATGGAATGGTTTGGAATTTCAGACAGGGCTTCAAAG

mRNA sequence

ATGAAGGATAGTTCTGGAGATCATAATAATTATAATAATAATCTTCATGTTAATTATCATGATCAATATAAATCTTCTTGTCCAAGAGGCCATTGGAGACCTGCTGAAGATGAAAAACTTCGTCAATTGGTTGAACAATATGGTGCTCAAAATTGGAATTCCATTGCTGAGAAACTTCAAGGCAGATCAGGAAAGAGTTGTAGATTGAGATGGTTTAATCAACTAGACCCAAGAATAATCAGAAAGCCATTTAGTGAAGAAGAAGAGGAAAGATTATTGGGAGCTCATAGAATACATGGAAATAAATGGTCACTTATAGCAAGACTATTTCCAGGTAGAACTGATAATGCTGTGAAGAATCATTGGCATGTTATTATGGCAAGAAAGCAAAGAGAACAATCAAAACTTTGTGGCAACAAAAGAACTTATCAACAATTTTCAAATTTAATTCTCAACAACAACCAAATTACAACACAATCTTCATCCTCAACAACAAatcatcatcatcatcatcatcatcatcctcaACTTACAACAACTACAATTCTTGTTTCTGACTacaacaacaacaacagcaacagcaaAGATGGAATGGTTTGGAATTTCAGACAGGGCTTCAAAG

Coding sequence (CDS)

ATGAAGGATAGTTCTGGAGATCATAATAATTATAATAATAATCTTCATGTTAATTATCATGATCAATATAAATCTTCTTGTCCAAGAGGCCATTGGAGACCTGCTGAAGATGAAAAaCTTCGTCAATTGGTTGAACAATATGGTGCTCAAAATTGGAATTCCATTGCTGAGAAACTTCAAGGCAGATCAGGAAAGAGTTGTAGATTGAGATGGTTTAATCAACTAGACCCAAGAATAATCAGAAAGCCATTTAGTGAAGAAGAAGAGGAAAGATTATTGGGAGCTCATAGAATACATGGAAATAAATGGTCACTTATAGCAAGACTATTTCCAGGTAGAACTGATAATGCTGTGAAGAATCATTGGCATGTTATTATGGCAAGAAAGCAAAGAGAACAATCAAAACTTTGTGGCAACAAAAGAACTTATCAACAATTTTCAAATTTAATTCTCAACAACAACCAAATTACAACACAATCTTCATCCTCAACAACAAATCATCATCATCATCATCATCATCATCCTCAACTTACAACAACTACAATTCTTGTTTCTGACTACAACAACAACAACAGCAACAGCAAAGATGGAATGGTTTGGAATTTCAGACAGGGCTTCAAAG

Protein sequence

MKDSSGDHNNYNNNLHVNYHDQYKSSCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRIIRKPFSEEEEERLLGAHRIHGNKWSLIARLFPGRTDNAVKNHWHVIMARKQREQSKLCGNKRTYQQFSNLILNNNQITTQSSSSTTNHHHHHHHHPQLTTTTILVSDYNNNNSNSKDGMVWNFRQGFKX

Homology

[Close]

BLAST of Cucsa.077160 vs. Swiss-Prot
Match: MYB44_ARATH (Transcription factor MYB44 OS=Arabidopsis thaliana GN=MYB44 PE=2 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 3.1e-30
Identity = 59/101 (58.42%), Postives = 75/101 (74.26%), Query Frame = 1


Query: 29  RGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRIIRKPFSEEE 88
           +G W P EDE+LR+LV +YG +NW  I++ + GRSGKSCRLRW NQL P++  +PFS EE
Sbjct: 6   KGPWSPEEDEQLRRLVVKYGPRNWTVISKSIPGRSGKSCRLRWCNQLSPQVEHRPFSAEE 65

Query: 89  EERLLGAHRIHGNKWSLIARLFPGRTDNAVKNHWHVIMARK 130
           +E +  AH   GNKW+ IARL  GRTDNAVKNHW+  + RK
Sbjct: 66  DETIARAHAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRK 106

[Close]

BLAST of Cucsa.077160 vs. Swiss-Prot
Match: MYB_XENLA (Transcriptional activator Myb OS=Xenopus laevis GN=myb PE=2 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 3.2e-27
Identity = 59/157 (37.58%), Postives = 97/157 (61.78%), Query Frame = 1


Query: 29  RGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRIIRKPFSEEE 88
           +G W   ED+++ +LV +YG + W+ IA+ L+GR GK CR RW N L+P + +  ++EEE
Sbjct: 89  KGPWTKEEDQRVIELVHKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKSSWTEEE 148

Query: 89  EERLLGAHRIHGNKWSLIARLFPGRTDNAVKNHWHVIMARKQREQSKLCGNKRTYQQ--F 148
           +  +  AH+  GN+W+ IA+L PGRTDNA+KNHW+  M RK+ ++  L  + +T Q    
Sbjct: 149 DRTIYEAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKEEQEGYLQNSSKTNQHTIV 208

Query: 149 SNLILNNNQIT----------TQSSSSTTNHHHHHHH 174
           +N   +N+ +T          +Q+S+S+  ++H   H
Sbjct: 209 TNFPKSNHLMTFTHTRASAEHSQASTSSFPYYHIAEH 245

HSP 2 Score: 77.8 bits (190), Expect = 1.6e-13
Identity = 35/93 (37.63%), Postives = 55/93 (59.14%), Query Frame = 1


Query: 32  WRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRIIRKPFSEEEEER 91
           W   EDEKL++LVEQ G + W  IA  L  R+   C+ RW   L+P +I+ P+++EE++R
Sbjct: 40  WTREEDEKLKKLVEQNGTEEWKVIASFLPNRTDVQCQHRWQKVLNPELIKGPWTKEEDQR 99

Query: 92  LLG-AHRIHGNKWSLIARLFPGRTDNAVKNHWH 124
           ++   H+    +WS+IA+   GR     +  WH
Sbjct: 100 VIELVHKYGPKRWSVIAKHLKGRIGKQCRERWH 132

[Close]

BLAST of Cucsa.077160 vs. Swiss-Prot
Match: MYBA_DICDI (Myb-like protein A OS=Dictyostelium discoideum GN=mybA PE=3 SV=2)

HSP 1 Score: 120.6 bits (301), Expect = 2.1e-26
Identity = 62/166 (37.35%), Postives = 94/166 (56.63%), Query Frame = 1


Query: 8   HNNYNNNLHVNYHDQYKSSCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSC 67
           H+ Y   LH N          +G W   ED+K+ +LV+ YG + W+ IA  L+GR GK C
Sbjct: 188 HHRYQKVLHPNL--------VKGAWTKDEDDKVIELVKTYGPKKWSDIALHLKGRMGKQC 247

Query: 68  RLRWFNQLDPRIIRKPFSEEEEERLLGAHRIHGNKWSLIARLFPGRTDNAVKNHWHVIMA 127
           R RW N L+P I ++ +S+EE++ +   H IHGNKW+ IA+  PGRTDNA+KNHW+  M 
Sbjct: 248 RERWHNHLNPNIKKEAWSDEEDQIIRDQHAIHGNKWAEIAKFLPGRTDNAIKNHWNSSMK 307

Query: 128 RKQREQSKLCGNKRTYQQFS--------NLILNNNQITTQSSSSTT 166
           R       L  +   +   S        ++I +++ I T ++++TT
Sbjct: 308 RVSNNNVHLKSHAIEHSLSSQDNQDSPKSIITSSSPIPTTTTTTTT 345

[Close]

BLAST of Cucsa.077160 vs. Swiss-Prot
Match: MYBB_XENLA (Myb-related protein B OS=Xenopus laevis GN=mybl2 PE=2 SV=2)

HSP 1 Score: 119.0 bits (297), Expect = 6.1e-26
Identity = 50/101 (49.50%), Postives = 74/101 (73.27%), Query Frame = 1


Query: 29  RGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRIIRKPFSEEE 88
           +G W   EDEK+ +LV++YG ++W  IA++L+GR GK CR RW N L+P + +  ++EEE
Sbjct: 83  KGPWTKEEDEKVIELVKKYGTKHWTLIAKQLRGRMGKQCRERWHNHLNPEVKKSSWTEEE 142

Query: 89  EERLLGAHRIHGNKWSLIARLFPGRTDNAVKNHWHVIMARK 130
           +  +  AH++ GN+W+ IA+L PGRTDNAVKNHW+  + RK
Sbjct: 143 DRIICQAHKVLGNRWAEIAKLLPGRTDNAVKNHWNSTIKRK 183

HSP 2 Score: 77.8 bits (190), Expect = 1.6e-13
Identity = 33/93 (35.48%), Postives = 56/93 (60.22%), Query Frame = 1


Query: 32  WRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRIIRKPFSEEEEER 91
           W P EDE L+ LV+++G   W +IA  L  R+ + C+ RW   L P +++ P+++EE+E+
Sbjct: 34  WTPEEDETLKALVKKHGQGEWKTIASNLNNRTEQQCQHRWLRVLHPDLVKGPWTKEEDEK 93

Query: 92  LLGAHRIHGNK-WSLIARLFPGRTDNAVKNHWH 124
           ++   + +G K W+LIA+   GR     +  WH
Sbjct: 94  VIELVKKYGTKHWTLIAKQLRGRMGKQCRERWH 126

[Close]

BLAST of Cucsa.077160 vs. Swiss-Prot
Match: MYBAA_DICDI (Myb-like protein AA OS=Dictyostelium discoideum GN=mybAA PE=3 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.4e-25
Identity = 65/171 (38.01%), Postives = 98/171 (57.31%), Query Frame = 1


Query: 29  RGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRIIRKPFSEEE 88
           +GHW   EDEKLR LV+ +G + W  IA  L  R+G+ CR RW NQLDP I R  ++ EE
Sbjct: 757 KGHWTKEEDEKLRSLVDLHGTKRWKYIASLLCLRNGRQCRERWSNQLDPSIKRDAWTLEE 816

Query: 89  EERLLGAHRIHGNKWSLIARLFPGRTDNAVKNHWHVIMARKQREQSKLCGNKRTYQQFSN 148
           +  +L AH  +GNKW+ I++L PGRT+ A+KNHW+  M RK         +K+ Y  FS+
Sbjct: 817 DRIILDAHSKYGNKWAEISKLLPGRTNCAIKNHWNSTMKRKL--------SKKQY-DFSS 876

Query: 149 LILNNNQITTQSSSSTTNHHHHHHHHPQLTTTT----ILVSDYNNNNSNSK 196
           L   ++ I + +SSS +         P  +  T    ++V+D+++     +
Sbjct: 877 LPPISSSIVSDNSSSLSTPTDSISSSPSTSPITLSSNVVVNDFDSQQQQQQ 918

[Close]

BLAST of Cucsa.077160 vs. TrEMBL
Match: A0A0A0KGJ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G344210 PE=4 SV=1)

HSP 1 Score: 447.2 bits (1149), Expect = 1.1e-122
Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 1


Query: 1   MKDSSGDHNNYNNNLHVNYHDQYKSSCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQ 60
           MKDSSGDHNNYNNNLHVNYHDQYKSSCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQ
Sbjct: 1   MKDSSGDHNNYNNNLHVNYHDQYKSSCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQ 60

Query: 61  GRSGKSCRLRWFNQLDPRIIRKPFSEEEEERLLGAHRIHGNKWSLIARLFPGRTDNAVKN 120
           GRSGKSCRLRWFNQLDPRIIRKPFSEEEEERLLGAHRIHGNKWSLIARLFPGRTDNAVKN
Sbjct: 61  GRSGKSCRLRWFNQLDPRIIRKPFSEEEEERLLGAHRIHGNKWSLIARLFPGRTDNAVKN 120

Query: 121 HWHVIMARKQREQSKLCGNKRTYQQFSNLILNNNQITTQSSSSTTNHHHHHHHHPQLTTT 180
           HWHVIMARKQREQSKLCGNKRTYQQFSNLILNNNQITTQSSSSTTNHHHHHHHHPQLTTT
Sbjct: 121 HWHVIMARKQREQSKLCGNKRTYQQFSNLILNNNQITTQSSSSTTNHHHHHHHHPQLTTT 180

Query: 181 TILVSDYNNNNSNSKDGMVWNFRQGFK 208
           TILVSDYNNNNSNSKDGMVWNFRQGFK
Sbjct: 181 TILVSDYNNNNSNSKDGMVWNFRQGFK 207

[Close]

BLAST of Cucsa.077160 vs. TrEMBL
Match: A0A067L752_JATCU (MYB family protein OS=Jatropha curcas GN=JCGZ_25264 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 3.3e-63
Identity = 119/152 (78.29%), Postives = 133/152 (87.50%), Query Frame = 1


Query: 25  SSCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRIIRKPF 84
           +SCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRI R+PF
Sbjct: 21  ASCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPF 80

Query: 85  SEEEEERLLGAHRIHGNKWSLIARLFPGRTDNAVKNHWHVIMARKQREQSKLCGNKRTYQ 144
           SEEEEERLL AHRIHGNKW+LIARLFPGRTDNAVKNHWHVIMARKQREQ+K+ G KR+Y 
Sbjct: 81  SEEEEERLLAAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQREQAKISG-KRSYH 140

Query: 145 QFSNLILNNNQITTQSSSSTTNHHHHHHHHPQ 177
              NLI++++      S ST  + HHH ++P+
Sbjct: 141 HQENLIISHD------SKSTKPNDHHHFNNPR 165

[Close]

BLAST of Cucsa.077160 vs. TrEMBL
Match: M5VN75_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016398mg PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 2.8e-62
Identity = 123/173 (71.10%), Postives = 140/173 (80.92%), Query Frame = 1


Query: 19  YHDQYKS-SCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDP 78
           Y D+ KS SCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDP
Sbjct: 4   YGDEAKSTSCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDP 63

Query: 79  RIIRKPFSEEEEERLLGAHRIHGNKWSLIARLFPGRTDNAVKNHWHVIMARKQREQSKLC 138
           RI R+PFSEEEEERLL AHRIHGNKW+LIARLFPGRTDNAVKNHWHVIMAR+QREQSK+C
Sbjct: 64  RINRRPFSEEEEERLLAAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARRQREQSKVC 123

Query: 139 GNKRTYQQFSNLILNNNQITTQSSSSTTNHHHHHHHHPQLTTTTILVSDYNNN 191
           G KR+YQ F     N++   T S S+  +         +L +++ +  D N++
Sbjct: 124 G-KRSYQDF----CNDHSSNTSSISNNFDVSRKFKSQGELRSSSSIGFDQNSS 171

[Close]

BLAST of Cucsa.077160 vs. TrEMBL
Match: W9RYV9_9ROSA (Transcription factor OS=Morus notabilis GN=L484_005386 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 4.8e-62
Identity = 124/213 (58.22%), Postives = 150/213 (70.42%), Query Frame = 1


Query: 1   MKDSSGDHNNYNNNLHVNYHDQYKSSCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQ 60
           M+DS+G  N+  ++           SCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQ
Sbjct: 1   MEDSAGPTNSSADDA---------KSCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQ 60

Query: 61  GRSGKSCRLRWFNQLDPRIIRKPFSEEEEERLLGAHRIHGNKWSLIARLFPGRTDNAVKN 120
           GRSGKSCRLRWFNQLDPRI R+PF+EEEEE+LL AHRIHGNKW+LIARLFPGRTDNAVKN
Sbjct: 61  GRSGKSCRLRWFNQLDPRINRRPFTEEEEEKLLAAHRIHGNKWALIARLFPGRTDNAVKN 120

Query: 121 HWHVIMARKQREQSKLCGNKRTYQQFSNLILNNNQ-------ITTQSSSSTTNHHHHHHH 180
           HWHVIMARKQRE+SKLCG + + Q   ++  N+++       IT+         H+H+H 
Sbjct: 121 HWHVIMARKQREESKLCGKRSSCQLQDHVYCNDSEGNFPARKITSFGIYDNNIDHYHNHG 180

Query: 181 HPQLTTTTI----LVSDYNNNNSNSKDGMVWNF 203
           H       I    ++   + +++ S     WNF
Sbjct: 181 HQYFKQVMIDKDRMLLSESPSSTTSSPPSNWNF 204

[Close]

BLAST of Cucsa.077160 vs. TrEMBL
Match: V4TD41_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001803mg PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 8.2e-62
Identity = 116/139 (83.45%), Postives = 126/139 (90.65%), Query Frame = 1


Query: 25  SSCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRIIRKPF 84
           S+CPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRI R+PF
Sbjct: 18  STCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPF 77

Query: 85  SEEEEERLLGAHRIHGNKWSLIARLFPGRTDNAVKNHWHVIMARKQREQSKLCGNKRTYQ 144
           +E+EEERLL AHRIHGNKW+LIARLFPGRTDNAVKNHWHVIMARKQREQSKLCG KR++Q
Sbjct: 78  TEDEEERLLAAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQREQSKLCG-KRSHQ 137

Query: 145 QFSNLILNNNQITTQSSSS 164
              N+I + N I  + S S
Sbjct: 138 DTGNIISDQNFIHARRSRS 155

[Close]

BLAST of Cucsa.077160 vs. TAIR10
Match: AT1G17950.1 (AT1G17950.1 myb domain protein 52)

HSP 1 Score: 204.1 bits (518), Expect = 8.1e-53
Identity = 91/110 (82.73%), Postives = 101/110 (91.82%), Query Frame = 1


Query: 27  CPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRIIRKPFSE 86
           C RGHWRPAEDEKLR+LVEQ+G  NWN+IA+KL GRSGKSCRLRWFNQLDPRI R PF+E
Sbjct: 3   CSRGHWRPAEDEKLRELVEQFGPHNWNAIAQKLSGRSGKSCRLRWFNQLDPRINRNPFTE 62

Query: 87  EEEERLLGAHRIHGNKWSLIARLFPGRTDNAVKNHWHVIMARKQREQSKL 137
           EEEERLL +HRIHGN+WS+IAR FPGRTDNAVKNHWHVIMAR+ RE+SKL
Sbjct: 63  EEEERLLASHRIHGNRWSVIARFFPGRTDNAVKNHWHVIMARRGRERSKL 112

[Close]

BLAST of Cucsa.077160 vs. TAIR10
Match: AT1G73410.1 (AT1G73410.1 myb domain protein 54)

HSP 1 Score: 201.4 bits (511), Expect = 5.3e-52
Identity = 91/109 (83.49%), Postives = 98/109 (89.91%), Query Frame = 1


Query: 27  CPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRIIRKPFSE 86
           C RGHWRPAEDEKL+ LVEQYG  NWN+IA KL GRSGKSCRLRWFNQLDPRI R PF+E
Sbjct: 4   CSRGHWRPAEDEKLKDLVEQYGPHNWNAIALKLPGRSGKSCRLRWFNQLDPRINRNPFTE 63

Query: 87  EEEERLLGAHRIHGNKWSLIARLFPGRTDNAVKNHWHVIMARKQREQSK 136
           EEEERLL AHRIHGN+WS+IARLFPGRTDNAVKNHWHVIMAR+ R+ SK
Sbjct: 64  EEEERLLAAHRIHGNRWSIIARLFPGRTDNAVKNHWHVIMARRTRQTSK 112

[Close]

BLAST of Cucsa.077160 vs. TAIR10
Match: AT1G69560.1 (AT1G69560.1 myb domain protein 105)

HSP 1 Score: 200.3 bits (508), Expect = 1.2e-51
Identity = 105/197 (53.30%), Postives = 125/197 (63.45%), Query Frame = 1


Query: 1   MKDSSGDHNNYNNNLHVNYHD---QYKSSCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAE 60
           M  +  D++N N      Y       K+S  RGHWRPAED KL++LV  YG QNWN IAE
Sbjct: 76  MNPNLSDYSNCNKKDTTVYRSCGHSSKASVSRGHWRPAEDTKLKELVAVYGPQNWNLIAE 135

Query: 61  KLQGRSGKSCRLRWFNQLDPRIIRKPFSEEEEERLLGAHRIHGNKWSLIARLFPGRTDNA 120
           KLQGRSGKSCRLRWFNQLDPRI R+ F+EEEEERL+ AHR++GNKW++IARLFPGRTDN+
Sbjct: 136 KLQGRSGKSCRLRWFNQLDPRINRRAFTEEEEERLMQAHRLYGNKWAMIARLFPGRTDNS 195

Query: 121 VKNHWHVIMARKQREQSKLCGNKRTYQQFSNLILNNNQITTQ-SSSSTTNHHHHHHHHPQ 180
           VKNHWHVIMARK REQS     ++T      LI  N  I      +     H     H Q
Sbjct: 196 VKNHWHVIMARKFREQSSSYRRRKTMVSLKPLINPNPHIFNDFDPTRLALTHLASSDHKQ 255

Query: 181 LTTTTILVSDYNNNNSN 194
           L         Y++ N +
Sbjct: 256 LMLPVPCFPGYDHENES 272

[Close]

BLAST of Cucsa.077160 vs. TAIR10
Match: AT1G26780.2 (AT1G26780.2 myb domain protein 117)

HSP 1 Score: 193.0 bits (489), Expect = 1.9e-49
Identity = 91/141 (64.54%), Postives = 109/141 (77.30%), Query Frame = 1


Query: 29  RGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRIIRKPFSEEE 88
           RGHWRPAED KL++LV  YG QNWN IAEKLQGRSGKSCRLRWFNQLDPRI R+ F+EEE
Sbjct: 98  RGHWRPAEDVKLKELVSIYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRINRRAFTEEE 157

Query: 89  EERLLGAHRIHGNKWSLIARLFPGRTDNAVKNHWHVIMARKQREQSKLCGNKRTYQQFSN 148
           EERL+ AHR++GNKW++IARLFPGRTDN+VKNHWHV+MARK RE S     ++       
Sbjct: 158 EERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVVMARKYREHSSAYRRRK------- 217

Query: 149 LILNNNQITTQSSSSTTNHHH 170
            +++NN +        TN+HH
Sbjct: 218 -LMSNNPL----KPHLTNNHH 226

[Close]

BLAST of Cucsa.077160 vs. TAIR10
Match: AT4G33450.1 (AT4G33450.1 myb domain protein 69)

HSP 1 Score: 192.6 bits (488), Expect = 2.5e-49
Identity = 90/145 (62.07%), Postives = 108/145 (74.48%), Query Frame = 1


Query: 18  NYHDQYKSSCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDP 77
           N  D  K SC RGHWRP ED+ LRQLVEQYG +NWN IA+ L GRSGKSCRLRW+NQLDP
Sbjct: 8   NSFDNKKPSCQRGHWRPVEDDNLRQLVEQYGPKNWNFIAQHLYGRSGKSCRLRWYNQLDP 67

Query: 78  RIIRKPFSEEEEERLLGAHRIHGNKWSLIARLFPGRTDNAVKNHWHVIMARKQREQSKLC 137
            I +KPF+EEEEERLL AHRI GN+W+ IARLFPGRTDNAVKNH+HVIMAR++RE     
Sbjct: 68  NITKKPFTEEEEERLLKAHRIQGNRWASIARLFPGRTDNAVKNHFHVIMARRKRENFSST 127

Query: 138 GNKRTYQQFSNLILNNNQITTQSSS 163
                 Q +  ++  ++ +T  + S
Sbjct: 128 ATSTFNQTWHTVLSPSSSLTRLNRS 152

[Close]

BLAST of Cucsa.077160 vs. NCBI nr
Match: gi|778714940|ref|XP_004144300.2| (PREDICTED: transcription factor MYB57-like isoform X1 [Cucumis sativus])

HSP 1 Score: 447.2 bits (1149), Expect = 1.6e-122
Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 1


Query: 1   MKDSSGDHNNYNNNLHVNYHDQYKSSCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQ 60
           MKDSSGDHNNYNNNLHVNYHDQYKSSCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQ
Sbjct: 1   MKDSSGDHNNYNNNLHVNYHDQYKSSCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQ 60

Query: 61  GRSGKSCRLRWFNQLDPRIIRKPFSEEEEERLLGAHRIHGNKWSLIARLFPGRTDNAVKN 120
           GRSGKSCRLRWFNQLDPRIIRKPFSEEEEERLLGAHRIHGNKWSLIARLFPGRTDNAVKN
Sbjct: 61  GRSGKSCRLRWFNQLDPRIIRKPFSEEEEERLLGAHRIHGNKWSLIARLFPGRTDNAVKN 120

Query: 121 HWHVIMARKQREQSKLCGNKRTYQQFSNLILNNNQITTQSSSSTTNHHHHHHHHPQLTTT 180
           HWHVIMARKQREQSKLCGNKRTYQQFSNLILNNNQITTQSSSSTTNHHHHHHHHPQLTTT
Sbjct: 121 HWHVIMARKQREQSKLCGNKRTYQQFSNLILNNNQITTQSSSSTTNHHHHHHHHPQLTTT 180

Query: 181 TILVSDYNNNNSNSKDGMVWNFRQGFK 208
           TILVSDYNNNNSNSKDGMVWNFRQGFK
Sbjct: 181 TILVSDYNNNNSNSKDGMVWNFRQGFK 207

[Close]

BLAST of Cucsa.077160 vs. NCBI nr
Match: gi|659081894|ref|XP_008441565.1| (PREDICTED: transcriptional activator Myb-like isoform X1 [Cucumis melo])

HSP 1 Score: 417.2 bits (1071), Expect = 1.7e-113
Identity = 201/212 (94.81%), Postives = 202/212 (95.28%), Query Frame = 1


Query: 1   MKDSSGDHNNYNNNLHVNYHDQYKSSCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQ 60
           MKDSSGDHNNYNNNLHV YHDQYK+SCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQ
Sbjct: 1   MKDSSGDHNNYNNNLHVGYHDQYKASCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQ 60

Query: 61  GRSGKSCRLRWFNQLDPRIIRKPFSEEEEERLLGAHRIHGNKWSLIARLFPGRTDNAVKN 120
           GRSGKSCRLRWFNQLDPRIIRKPFSEEEEERLLGAHRIHGNKWSLIARLFPGRTDNAVKN
Sbjct: 61  GRSGKSCRLRWFNQLDPRIIRKPFSEEEEERLLGAHRIHGNKWSLIARLFPGRTDNAVKN 120

Query: 121 HWHVIMARKQREQSKLCGNKRTYQQFSNLILNNNQ---ITTQSSSSTTNHHH-HHHHHPQ 180
           HWHVIMARKQREQSKLCGNKRTYQQFSNLILNNN     TTQSSSSTTNHHH HHHHHPQ
Sbjct: 121 HWHVIMARKQREQSKLCGNKRTYQQFSNLILNNNNNQITTTQSSSSTTNHHHLHHHHHPQ 180

Query: 181 LTTTTILVSDY-NNNNSNSKDGMVWNFRQGFK 208
             TTTILVSDY NNNNSNSKDGMVWNFRQGFK
Sbjct: 181 F-TTTILVSDYNNNNNSNSKDGMVWNFRQGFK 211

[Close]

BLAST of Cucsa.077160 vs. NCBI nr
Match: gi|802559359|ref|XP_012066143.1| (PREDICTED: transcription factor LAF1-like [Jatropha curcas])

HSP 1 Score: 249.6 bits (636), Expect = 4.8e-63
Identity = 119/152 (78.29%), Postives = 133/152 (87.50%), Query Frame = 1


Query: 25  SSCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRIIRKPF 84
           +SCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRI R+PF
Sbjct: 21  ASCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPF 80

Query: 85  SEEEEERLLGAHRIHGNKWSLIARLFPGRTDNAVKNHWHVIMARKQREQSKLCGNKRTYQ 144
           SEEEEERLL AHRIHGNKW+LIARLFPGRTDNAVKNHWHVIMARKQREQ+K+ G KR+Y 
Sbjct: 81  SEEEEERLLAAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQREQAKISG-KRSYH 140

Query: 145 QFSNLILNNNQITTQSSSSTTNHHHHHHHHPQ 177
              NLI++++      S ST  + HHH ++P+
Sbjct: 141 HQENLIISHD------SKSTKPNDHHHFNNPR 165

[Close]

BLAST of Cucsa.077160 vs. NCBI nr
Match: gi|1009175080|ref|XP_015868687.1| (PREDICTED: transcription factor MYB51-like [Ziziphus jujuba])

HSP 1 Score: 248.4 bits (633), Expect = 1.1e-62
Identity = 128/191 (67.02%), Postives = 138/191 (72.25%), Query Frame = 1


Query: 26  SCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRIIRKPFS 85
           +CPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRI R+PF+
Sbjct: 14  TCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFT 73

Query: 86  EEEEERLLGAHRIHGNKWSLIARLFPGRTDNAVKNHWHVIMARKQREQSKLCGNKRTYQQ 145
           EEEEERLL AHRIHGNKW+LIARLFPGRTDNAVKNHWHVIMARKQREQSKLCGNKR+YQ 
Sbjct: 74  EEEEERLLAAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQREQSKLCGNKRSYQD 133

Query: 146 FSNLILNNNQ----------ITTQSSSSTTNHHHHHHHHPQL----TTTTILVSDYNNNN 203
             N   NN++             Q      N    +    Q+         L S  NNNN
Sbjct: 134 LCN---NNSEPSSINFLTRKAAAQGEFKLGNGLVENAKLFQINHNPNKDRKLASMDNNNN 193

[Close]

BLAST of Cucsa.077160 vs. NCBI nr
Match: gi|470112665|ref|XP_004292552.1| (PREDICTED: myb-like protein AA [Fragaria vesca subsp. vesca])

HSP 1 Score: 247.7 bits (631), Expect = 1.8e-62
Identity = 126/182 (69.23%), Postives = 146/182 (80.22%), Query Frame = 1


Query: 21  DQYKS-SCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRI 80
           D+ KS SCPRGHWRPAEDE+LRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRI
Sbjct: 13  DESKSTSCPRGHWRPAEDERLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRI 72

Query: 81  IRKPFSEEEEERLLGAHRIHGNKWSLIARLFPGRTDNAVKNHWHVIMARKQREQSKL-CG 140
            R+PFSEEEEERLL AHRIHGNKW++IARLFPGRTDNAVKNHWHVIMAR+QREQSKL CG
Sbjct: 73  NRRPFSEEEEERLLAAHRIHGNKWAMIARLFPGRTDNAVKNHWHVIMARRQREQSKLICG 132

Query: 141 NKRTYQQFSNLILNNNQITTQSSS-----------STTNHHHHHHHHPQLTTTTILVSDY 190
           +KR+YQ F   +++N+ ++  SSS           S+T   H+     Q ++TT  V ++
Sbjct: 133 SKRSYQDF---LISNDSLSNTSSSISNAFDLRILKSSTGFDHN-----QSSSTTSTVFEF 186

The following BLAST results are available for this feature:

BLAST of Cucsa.077160 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MYB44_ARATH	3.1e-30	58.42	Transcription factor MYB44 OS=Arabidopsis thaliana GN=MYB44 PE=2 SV=1	[more]
MYB_XENLA	3.2e-27	37.58	Transcriptional activator Myb OS=Xenopus laevis GN=myb PE=2 SV=1	[more]
MYBA_DICDI	2.1e-26	37.35	Myb-like protein A OS=Dictyostelium discoideum GN=mybA PE=3 SV=2	[more]
MYBB_XENLA	6.1e-26	49.50	Myb-related protein B OS=Xenopus laevis GN=mybl2 PE=2 SV=2	[more]
MYBAA_DICDI	1.4e-25	38.01	Myb-like protein AA OS=Dictyostelium discoideum GN=mybAA PE=3 SV=1	[more]

BLAST of Cucsa.077160 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGJ9_CUCSA	1.1e-122	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G344210 PE=4 SV=1	[more]
A0A067L752_JATCU	3.3e-63	78.29	MYB family protein OS=Jatropha curcas GN=JCGZ_25264 PE=4 SV=1	[more]
M5VN75_PRUPE	2.8e-62	71.10	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016398mg PE=4 SV=1	[more]
W9RYV9_9ROSA	4.8e-62	58.22	Transcription factor OS=Morus notabilis GN=L484_005386 PE=4 SV=1	[more]
V4TD41_9ROSI	8.2e-62	83.45	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001803mg PE=4 SV=1	[more]

BLAST of Cucsa.077160 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G17950.1	8.1e-53	82.73	myb domain protein 52	[more]
AT1G73410.1	5.3e-52	83.49	myb domain protein 54	[more]
AT1G69560.1	1.2e-51	53.30	myb domain protein 105	[more]
AT1G26780.2	1.9e-49	64.54	myb domain protein 117	[more]
AT4G33450.1	2.5e-49	62.07	myb domain protein 69	[more]

BLAST of Cucsa.077160 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778714940\|ref\|XP_004144300.2\|	1.6e-122	100.00	PREDICTED: transcription factor MYB57-like isoform X1 [Cucumis sativus]	[more]
gi\|659081894\|ref\|XP_008441565.1\|	1.7e-113	94.81	PREDICTED: transcriptional activator Myb-like isoform X1 [Cucumis melo]	[more]
gi\|802559359\|ref\|XP_012066143.1\|	4.8e-63	78.29	PREDICTED: transcription factor LAF1-like [Jatropha curcas]	[more]
gi\|1009175080\|ref\|XP_015868687.1\|	1.1e-62	67.02	PREDICTED: transcription factor MYB51-like [Ziziphus jujuba]	[more]
gi\|470112665\|ref\|XP_004292552.1\|	1.8e-62	69.23	PREDICTED: myb-like protein AA [Fragaria vesca subsp. vesca]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001005	SANT/Myb
IPR009057	Homeobox-like_sf
IPR017930	Myb_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:2000652	regulation of secondary cell wall biogenesis
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0008150	biological_process
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.077160.1	Cucsa.077160.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 29..74 score: 1.7E-17coord: 81..123 score: 2.3
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 28..77 score: 8.4E-15coord: 80..128 score: 4.9
IPR009057	Homeodomain-like	GENE3D	G3DSA:1.10.10.60		coord: 83..129 score: 8.6E-21coord: 30..82 score: 5.0
IPR009057	Homeodomain-like	unknown	SSF46689	Homeodomain-like	coord: 27..122 score: 3.33
IPR017930	Myb domain	PROFILE	PS51294	HTH_MYB	coord: 80..130 score: 21.037coord: 24..79 score: 25
None	No IPR available	PANTHER	PTHR10641	MYB-LIKE DNA-BINDING PROTEIN MYB	coord: 1..145 score: 3.1
None	No IPR available	PANTHER	PTHR10641:SF496	SUBFAMILY NOT NAMED	coord: 1..145 score: 3.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.077160	Cla013871	Watermelon (97103) v1	cgywmB082
Cucsa.077160	Csa6G344210	Cucumber (Chinese Long) v2	cgycuB074
Cucsa.077160	MELO3C008423	Melon (DHL92) v3.5.1	cgymeB079
Cucsa.077160	ClCG08G006350	Watermelon (Charleston Gray)	cgywcgB080
Cucsa.077160	CSPI06G18190	Wild cucumber (PI 183967)	cgycpiB077
Cucsa.077160	CmaCh15G006330	Cucurbita maxima (Rimu)	cgycmaB0130
Cucsa.077160	CmaCh04G024150	Cucurbita maxima (Rimu)	cgycmaB0131
Cucsa.077160	CmoCh04G025320	Cucurbita moschata (Rifu)	cgycmoB0128
Cucsa.077160	CmoCh15G006410	Cucurbita moschata (Rifu)	cgycmoB0127
Cucsa.077160	Lsi08G005130	Bottle gourd (USVL1VR-Ls)	cgylsiB079
Cucsa.077160	Cp4.1LG13g04250	Cucurbita pepo (Zucchini)	cgycpeB0127
Cucsa.077160	Cp4.1LG01g20980	Cucurbita pepo (Zucchini)	cgycpeB0128
Cucsa.077160	Cp4.1LG06g07790	Cucurbita pepo (Zucchini)	cgycpeB0129
Cucsa.077160	MELO3C008423.2	Melon (DHL92) v3.6.1	cgymedB078
Cucsa.077160	CsaV3_6G031070	Cucumber (Chinese Long) v3	cgycucB078
Cucsa.077160	Cla97C08G149140	Watermelon (97103) v2	cgywmbB076
Cucsa.077160	Bhi04G001431	Wax gourd	cgywgoB089
Cucsa.077160	Carg15764	Silver-seed gourd	carcgyB0070
Cucsa.077160	Carg01573	Silver-seed gourd	carcgyB0944

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None