Cla013871 (gene) Watermelon (97103) v1

Overview
NameCla013871
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionMYB transcription factor (AHRD V1 *-** B9I4W4_POPTR); contains Interpro domain(s) IPR015495 Myb transcription factor
LocationChr8 : 15614824 .. 15616294 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGATTCTGCGGATAATCTTCATCTTAATTATCATGATCATCAGTATAAATCATCTTGTCCACGAGGCCATTGGAGGCCTGCTGAAGATGAAAAGCTTCGTCAATTAGTTGAACAATATGGTGCCCAAAATTGGAATTCCATTGCTGAAAAACTTCAAGGCAGATCAGGTACTTATTATTTATCAAAAATTTTCGCAAAAATATAATTTCTACTTTCAAGTTTTAATTTCTCTCTAATTTGTTCTTATCAGTTATGATAAATTCAAATTTCTATTGATCTTTTTTTTTTTTTTCATAATTAAACCGATCGAGGATGTTTATGTGTTTGGAGTAATTGTACGGATCAATAAAGTTGGTAAAATAACTAAAACCAGCACATCAATTTTTTTTTTTTGTATAATTTTTTTTTTAACAAGAGACTAGAGAAAAGAGGGACTAAAATGTGCACCGAGATATCTCAACTAGGTTGACACATTCTTAACATCGAATCATCATATTCTAAACCCAAAAGTGATGCATACATATATATAAGCAGAGAGCTAGAGGAGATCGGCTCAATCGGAAGAAAACAAAATACAAATAAAAAGGCTTTTTTGTGTGTAAAGGGTTTGGTTTAAAAAGGGTTAAATTTCTAAATTTGTTGTCTCAATTTGATTTGATTTGAAGTGTGTTAGTAAATAATCCTTTTAATTTTGATGTTAATTAATAAGATAATTGAAATTAAATTAATGATAATTGTGTTGTTTGTTAGGAAAGAGCTGTAGATTGAGATGGTTTAATCAACTTGATCCAAGAATAATCAGAAAGCCATTTAGTGAAGAAGAAGAGGAAAGGCTATTGGGAGCTCATAGAATACATGGAAATAAATGGTCATTAATAGCAAGATTATTTCCTGGTAGAACTGATAATGCTGTGAAGAATCATTGGCATGTTATAATGGCAAGAAAGCAAAGAGAACAATCAAAACTTTGTGGCAACAAAAGAACTTATCAACAATTTTCAGCTACTTCTTCTTCTTCTAATTTTCTCAACCAAACAACAACACAATCTTCCTCAACAAATCATCCTCAATTTACAACTACAATTCTTCTTTCTGACAACAACAACAACAATTCCCATAAAGATGGAATGGTTTGGAATTTCAGACAGGGCAGCTTCAAAGGTTATTCAGACAATATTCTCTATAGTACATCACATTATAATAATAATAATTATTATTATTATCCTAATTCATCTTCATCAGCTAGATTTCGCTTCCCAAATAATAAAATTCCTTTTGGGGTTTTTGAATTTGGTAGCCAGCTTTGCCCCTCAACTACAACACTTAAGAAGTTCATGGCTAACACTGATCATAATAATCGCCATCATCTTCATGCTCAAGAATCACAAGTACAAGAACAGGAATCTCCTAAGGACAAGGATATTCCCTTCATAGATTTCCTTGGAGTTGGAATTTCTTCTTCATAA

mRNA sequence

ATGAAGGATTCTGCGGATAATCTTCATCTTAATTATCATGATCATCAGTATAAATCATCTTGTCCACGAGGCCATTGGAGGCCTGCTGAAGATGAAAAGCTTCGTCAATTAGTTGAACAATATGGTGCCCAAAATTGGAATTCCATTGCTGAAAAACTTCAAGGCAGATCAGGAAAGAGCTGTAGATTGAGATGGTTTAATCAACTTGATCCAAGAATAATCAGAAAGCCATTTAGTGAAGAAGAAGAGGAAAGGCTATTGGGAGCTCATAGAATACATGGAAATAAATGGTCATTAATAGCAAGATTATTTCCTGGTAGAACTGATAATGCTGTGAAGAATCATTGGCATGTTATAATGGCAAGAAAGCAAAGAGAACAATCAAAACTTTGTGGCAACAAAAGAACTTATCAACAATTTTCAGCTACTTCTTCTTCTTCTAATTTTCTCAACCAAACAACAACACAATCTTCCTCAACAAATCATCCTCAATTTACAACTACAATTCTTCTTTCTGACAACAACAACAACAATTCCCATAAAGATGGAATGGTTTGGAATTTCAGACAGGGCAGCTTCAAAGGTTATTCAGACAATATTCTCTATAGTACATCACATTATAATAATAATAATTATTATTATTATCCTAATTCATCTTCATCAGCTAGATTTCGCTTCCCAAATAATAAAATTCCTTTTGGGGTTTTTGAATTTGGTAGCCAGCTTTGCCCCTCAACTACAACACTTAAGAAGTTCATGGCTAACACTGATCATAATAATCGCCATCATCTTCATGCTCAAGAATCACAAGTACAAGAACAGGAATCTCCTAAGGACAAGGATATTCCCTTCATAGATTTCCTTGGAGTTGGAATTTCTTCTTCATAA

Coding sequence (CDS)

ATGAAGGATTCTGCGGATAATCTTCATCTTAATTATCATGATCATCAGTATAAATCATCTTGTCCACGAGGCCATTGGAGGCCTGCTGAAGATGAAAAGCTTCGTCAATTAGTTGAACAATATGGTGCCCAAAATTGGAATTCCATTGCTGAAAAACTTCAAGGCAGATCAGGAAAGAGCTGTAGATTGAGATGGTTTAATCAACTTGATCCAAGAATAATCAGAAAGCCATTTAGTGAAGAAGAAGAGGAAAGGCTATTGGGAGCTCATAGAATACATGGAAATAAATGGTCATTAATAGCAAGATTATTTCCTGGTAGAACTGATAATGCTGTGAAGAATCATTGGCATGTTATAATGGCAAGAAAGCAAAGAGAACAATCAAAACTTTGTGGCAACAAAAGAACTTATCAACAATTTTCAGCTACTTCTTCTTCTTCTAATTTTCTCAACCAAACAACAACACAATCTTCCTCAACAAATCATCCTCAATTTACAACTACAATTCTTCTTTCTGACAACAACAACAACAATTCCCATAAAGATGGAATGGTTTGGAATTTCAGACAGGGCAGCTTCAAAGGTTATTCAGACAATATTCTCTATAGTACATCACATTATAATAATAATAATTATTATTATTATCCTAATTCATCTTCATCAGCTAGATTTCGCTTCCCAAATAATAAAATTCCTTTTGGGGTTTTTGAATTTGGTAGCCAGCTTTGCCCCTCAACTACAACACTTAAGAAGTTCATGGCTAACACTGATCATAATAATCGCCATCATCTTCATGCTCAAGAATCACAAGTACAAGAACAGGAATCTCCTAAGGACAAGGATATTCCCTTCATAGATTTCCTTGGAGTTGGAATTTCTTCTTCATAA

Protein sequence

MKDSADNLHLNYHDHQYKSSCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRIIRKPFSEEEEERLLGAHRIHGNKWSLIARLFPGRTDNAVKNHWHVIMARKQREQSKLCGNKRTYQQFSATSSSSNFLNQTTTQSSSTNHPQFTTTILLSDNNNNNSHKDGMVWNFRQGSFKGYSDNILYSTSHYNNNNYYYYPNSSSSARFRFPNNKIPFGVFEFGSQLCPSTTTLKKFMANTDHNNRHHLHAQESQVQEQESPKDKDIPFIDFLGVGISSS
Homology
[Close]
BLAST of Cla013871 vs. Swiss-Prot
Match: MYB44_ARATH (Transcription factor MYB44 OS=Arabidopsis thaliana GN=MYB44 PE=2 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 4.4e-30
Identity = 59/101 (58.42%), Postives = 73/101 (72.28%), Query Frame = 1 

Query: 23  RGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRIIRKPFSEEE 82
           +G W P EDE+LR+LV +YG +NW  I++ + GRSGKSCRLRW NQL P++  +PFS EE
Sbjct: 6   KGPWSPEEDEQLRRLVVKYGPRNWTVISKSIPGRSGKSCRLRWCNQLSPQVEHRPFSAEE 65

Query: 83  EERLLGAHRIHGNKWSLIARLFPGRTDNAVKNHWHVIMARK 124
           +E +  AH   GNKW+ IARL  GRTDNAVKNHW+  + RK
Sbjct: 66  DETIARAHAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRK 106

[Close]
BLAST of Cla013871 vs. Swiss-Prot
Match: MYB_XENLA (Transcriptional activator Myb OS=Xenopus laevis GN=myb PE=2 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.4e-28
Identity = 60/147 (40.82%), Postives = 90/147 (61.22%), Query Frame = 1 

Query: 23  RGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRIIRKPFSEEE 82
           +G W   ED+++ +LV +YG + W+ IA+ L+GR GK CR RW N L+P + +  ++EEE
Sbjct: 89  KGPWTKEEDQRVIELVHKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKSSWTEEE 148

Query: 83  EERLLGAHRIHGNKWSLIARLFPGRTDNAVKNHWHVIMARKQREQSKLCGNKRTYQQFSA 142
           +  +  AH+  GN+W+ IA+L PGRTDNA+KNHW+  M RK+ ++  L  + +T Q    
Sbjct: 149 DRTIYEAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKEEQEGYLQNSSKTNQHTIV 208

Query: 143 TS-SSSNFLNQTTTQSSSTNHPQFTTT 169
           T+   SN L   T   +S  H Q +T+
Sbjct: 209 TNFPKSNHLMTFTHTRASAEHSQASTS 235


HSP 2 Score: 80.5 bits (197), Expect = 3.4e-14
Identity = 40/122 (32.79%), Postives = 64/122 (52.46%), Query Frame = 1 

Query: 2   KDSADNLHLNYHDHQYKSSCPRGH-----WRPAEDEKLRQLVEQYGAQNWNSIAEKLQGR 61
           ++  D + +  HD+    S  + H     W   EDEKL++LVEQ G + W  IA  L  R
Sbjct: 11  EEEDDEIEMYEHDYDGLLSKGKRHLGKTRWTREEDEKLKKLVEQNGTEEWKVIASFLPNR 70

Query: 62  SGKSCRLRWFNQLDPRIIRKPFSEEEEERLLG-AHRIHGNKWSLIARLFPGRTDNAVKNH 118
           +   C+ RW   L+P +I+ P+++EE++R++   H+    +WS+IA+   GR     +  
Sbjct: 71  TDVQCQHRWQKVLNPELIKGPWTKEEDQRVIELVHKYGPKRWSVIAKHLKGRIGKQCRER 130

[Close]
BLAST of Cla013871 vs. Swiss-Prot
Match: MYBAA_DICDI (Myb-like protein AA OS=Dictyostelium discoideum GN=mybAA PE=3 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.7e-26
Identity = 69/200 (34.50%), Postives = 108/200 (54.00%), Query Frame = 1 

Query: 23  RGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRIIRKPFSEEE 82
           +GHW   EDEKLR LV+ +G + W  IA  L  R+G+ CR RW NQLDP I R  ++ EE
Sbjct: 757 KGHWTKEEDEKLRSLVDLHGTKRWKYIASLLCLRNGRQCRERWSNQLDPSIKRDAWTLEE 816

Query: 83  EERLLGAHRIHGNKWSLIARLFPGRTDNAVKNHWHVIMARKQREQSKLCGNKRTYQQFSA 142
           +  +L AH  +GNKW+ I++L PGRT+ A+KNHW+  M RK  ++     +         
Sbjct: 817 DRIILDAHSKYGNKWAEISKLLPGRTNCAIKNHWNSTMKRKLSKKQYDFSSLPPISSSIV 876

Query: 143 TSSSSNFLNQTTTQSSSTNHPQFTTTILLSDNNNNNSHKDGMVWNFRQGSFKGY-SDNIL 202
           + +SS+    T + SSS +    T +  +  N+ ++  +      ++Q   +   S N  
Sbjct: 877 SDNSSSLSTPTDSISSSPSTSPITLSSNVVVNDFDSQQQQQQQQTYQQPPPQSQDSGNNQ 936

Query: 203 YSTSHYNNNNYYYYPNSSSS 222
           ++ ++ NNNN     N+++S
Sbjct: 937 FNFNNNNNNNNNNNNNNNNS 956

[Close]
BLAST of Cla013871 vs. Swiss-Prot
Match: MYB_HUMAN (Transcriptional activator Myb OS=Homo sapiens GN=MYB PE=1 SV=2)

HSP 1 Score: 120.6 bits (301), Expect = 3.0e-26
Identity = 54/126 (42.86%), Postives = 80/126 (63.49%), Query Frame = 1 

Query: 23  RGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRIIRKPFSEEE 82
           +G W   ED+++ +LV++YG + W+ IA+ L+GR GK CR RW N L+P + +  ++EEE
Sbjct: 92  KGPWTKEEDQRVIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEE 151

Query: 83  EERLLGAHRIHGNKWSLIARLFPGRTDNAVKNHWHVIMARKQREQSKLCGNKRTYQQFSA 142
           +  +  AH+  GN+W+ IA+L PGRTDNA+KNHW+  M RK  ++  L  + +  Q   A
Sbjct: 152 DRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVEQEGYLQESSKASQPAVA 211

Query: 143 TSSSSN 149
           TS   N
Sbjct: 212 TSFQKN 217


HSP 2 Score: 79.7 bits (195), Expect = 5.8e-14
Identity = 40/113 (35.40%), Postives = 59/113 (52.21%), Query Frame = 1 

Query: 14  DHQYKSSCPRG--------HWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRW 73
           DH Y    P+          W   EDEKL++LVEQ G  +W  IA  L  R+   C+ RW
Sbjct: 23  DHDYDGLLPKSGKRHLGKTRWTREEDEKLKKLVEQNGTDDWKVIANYLPNRTDVQCQHRW 82

Query: 74  FNQLDPRIIRKPFSEEEEERLLGAHRIHGNK-WSLIARLFPGRTDNAVKNHWH 118
              L+P +I+ P+++EE++R++   + +G K WS+IA+   GR     +  WH
Sbjct: 83  QKVLNPELIKGPWTKEEDQRVIELVQKYGPKRWSVIAKHLKGRIGKQCRERWH 135

[Close]
BLAST of Cla013871 vs. Swiss-Prot
Match: MYBA_DICDI (Myb-like protein A OS=Dictyostelium discoideum GN=mybA PE=3 SV=2)

HSP 1 Score: 119.4 bits (298), Expect = 6.6e-26
Identity = 60/146 (41.10%), Postives = 86/146 (58.90%), Query Frame = 1 

Query: 23  RGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRIIRKPFSEEE 82
           +G W   ED+K+ +LV+ YG + W+ IA  L+GR GK CR RW N L+P I ++ +S+EE
Sbjct: 201 KGAWTKDEDDKVIELVKTYGPKKWSDIALHLKGRMGKQCRERWHNHLNPNIKKEAWSDEE 260

Query: 83  EERLLGAHRIHGNKWSLIARLFPGRTDNAVKNHWHVIMARKQREQSKLCGNKRTYQQFSA 142
           ++ +   H IHGNKW+ IA+  PGRTDNA+KNHW+  M R       L    +++    +
Sbjct: 261 DQIIRDQHAIHGNKWAEIAKFLPGRTDNAIKNHWNSSMKRVSNNNVHL----KSHAIEHS 320

Query: 143 TSSSSNFLNQTTTQSSSTNHPQFTTT 169
            SS  N  +  +  +SS+  P  TTT
Sbjct: 321 LSSQDNQDSPKSIITSSSPIPTTTTT 342

[Close]
BLAST of Cla013871 vs. TrEMBL
Match: A0A0A0KGJ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G344210 PE=4 SV=1)

HSP 1 Score: 444.5 bits (1142), Expect = 1.0e-121
Identity = 246/321 (76.64%), Postives = 261/321 (81.31%), Query Frame = 1 

Query: 1   MKDSA-------DNLHLNYHDHQYKSSCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKL 60
           MKDS+       +NLH+NYHD QYKSSCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKL
Sbjct: 1   MKDSSGDHNNYNNNLHVNYHD-QYKSSCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKL 60

Query: 61  QGRSGKSCRLRWFNQLDPRIIRKPFSEEEEERLLGAHRIHGNKWSLIARLFPGRTDNAVK 120
           QGRSGKSCRLRWFNQLDPRIIRKPFSEEEEERLLGAHRIHGNKWSLIARLFPGRTDNAVK
Sbjct: 61  QGRSGKSCRLRWFNQLDPRIIRKPFSEEEEERLLGAHRIHGNKWSLIARLFPGRTDNAVK 120

Query: 121 NHWHVIMARKQREQSKLCGNKRTYQQFSATSSSSNFLNQTTTQSSST---------NHPQ 180
           NHWHVIMARKQREQSKLCGNKRTYQQFS    ++   NQ TTQSSS+         +HPQ
Sbjct: 121 NHWHVIMARKQREQSKLCGNKRTYQQFSNLILNN---NQITTQSSSSTTNHHHHHHHHPQ 180

Query: 181 F-TTTILLSDNNNNNSH-KDGMVWNFRQGSFKGYSD--NILY--STSHYNNNNYYYYPN- 240
             TTTIL+SD NNNNS+ KDGMVWNFRQG FKGYSD  NILY  S+SH+   NY YYPN 
Sbjct: 181 LTTTTILVSDYNNNNSNSKDGMVWNFRQG-FKGYSDNNNILYRSSSSHF---NYNYYPNS 240

Query: 241 ---SSSSARFRFPNNKIPFGVFEFGSQLCPSTTTLKKFMANTDHNNRHHLHAQESQVQEQ 295
              SSSSARF FPNNKIP GVFEFGS   PSTT L KFMANTD  N +H   Q   +Q++
Sbjct: 241 SSSSSSSARFCFPNNKIPIGVFEFGS---PSTTALMKFMANTDDRNNNH-DQQPQVLQQE 300

[Close]
BLAST of Cla013871 vs. TrEMBL
Match: E0CQL8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g15260 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 3.3e-72
Identity = 167/316 (52.85%), Postives = 197/316 (62.34%), Query Frame = 1 

Query: 20  SCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRIIRKPFS 79
           +CPRGHWRPAEDEKLRQLVE+YGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRI RKPF+
Sbjct: 10  TCPRGHWRPAEDEKLRQLVEEYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRKPFT 69

Query: 80  EEEEERLLGAHRIHGNKWSLIARLFPGRTDNAVKNHWHVIMARKQREQSKLCGNKRTY-- 139
           EEEEERLL AHRIHGNKW+LI+RLFPGRTDNAVKNHWHVIMARKQREQSKLCG KR+Y  
Sbjct: 70  EEEEERLLAAHRIHGNKWALISRLFPGRTDNAVKNHWHVIMARKQREQSKLCG-KRSYKD 129

Query: 140 -------------------QQFSATSSSSN-----FLNQTT----TQSSSTNHPQFTTTI 199
                              QQ+S+ +   N     FLN       + S S++ P +T   
Sbjct: 130 VLSDSNTSSNGFRGSNSRSQQYSSANRLENSRLFEFLNPNKEGIFSISPSSSSPSWTFAR 189

Query: 200 LLSDNNNNNSHKDGMVWNFRQGSFKGYSDNILYSTSHYNNNNYYYYPNSS------SSAR 259
            +S   NN+S  D +    R       SD I+ S +  + + Y Y+ NSS      +S  
Sbjct: 190 SISKATNNSSSTDLLRRGGRDHFNSCSSDGIMDSQNSLDRSLYRYFSNSSAYGGYRTSTA 249

Query: 260 FRFPNNKI----PFGVFEFGSQLCPSTTTLKKFMANTDHNNRH-HLHAQESQVQEQESPK 295
           F FPN K     P G  + G    P     ++F+   D++     +     Q QE ES K
Sbjct: 250 FGFPNYKRVVSGPVGYSKLGD---PHGMLKREFVNFGDNSPTFAKMIMTNQQEQEDESIK 309

[Close]
BLAST of Cla013871 vs. TrEMBL
Match: A0A0B0NFX4_GOSAR (Transcription factor MYB44-like protein OS=Gossypium arboreum GN=F383_14856 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 2.6e-69
Identity = 160/325 (49.23%), Postives = 196/325 (60.31%), Query Frame = 1 

Query: 20  SCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRIIRKPFS 79
           +CPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRI R+PF+
Sbjct: 15  TCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFT 74

Query: 80  EEEEERLLGAHRIHGNKWSLIARLFPGRTDNAVKNHWHVIMARKQREQSKLC-------- 139
           EEEEERLL AH IHGNKW+LIARLFPGRTDNAVKNHWHVIMARKQREQSKLC        
Sbjct: 75  EEEEERLLAAHHIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQREQSKLCGKRSFQDA 134

Query: 140 ------------------------------GNKRTYQQFSATSSSSNFLNQTTTQSSSTN 199
                                         G+ R + QF        F   +T+ +SS +
Sbjct: 135 FSDSKLSSTGFSTSRKLARCQEAFSSRFGFGDSRFFDQFQNQGKDKIFSVSSTSTTSSPS 194

Query: 200 HPQFTTTILLSDNNNNN--SHKDGMVWNFRQGSFKGYSDN---ILYSTSHYNNNNYYYYP 259
               ++T++ S+N+++   S +DG     R GS     D    +  S   Y++N   Y  
Sbjct: 195 WNFASSTMVASNNSSSAQLSIRDGKNHLLRSGSSYYSMDTSKLLDQSLYKYHSNASAYCS 254

Query: 260 NSSSSARFRFPNNK----IPFGVFEFGSQLCPSTTTL-KKFMANTDHNNRH-HLHAQESQ 295
           +  +S+ F   N +     PFG  + G     +   + K+F++ TD+  +  +L    SQ
Sbjct: 255 SFRNSSAFGIHNYRRVVPSPFGYLKLGDNFESNNGVMTKEFLSITDNAPKSANLRVSNSQ 314

[Close]
BLAST of Cla013871 vs. TrEMBL
Match: A0A067H7L1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g020106mg PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 4.4e-69
Identity = 155/316 (49.05%), Postives = 192/316 (60.76%), Query Frame = 1 

Query: 19  SSCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRIIRKPF 78
           S+CPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRI R+PF
Sbjct: 18  STCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPF 77

Query: 79  SEEEEERLLGAHRIHGNKWSLIARLFPGRTDNAVKNHWHVIMARKQREQSKLCGNKRTYQ 138
           +E+EEERLL AHRIHGNKW+LIARLFPGRTDNAVKNHWHVIMARKQREQSKLCG KR++Q
Sbjct: 78  TEDEEERLLAAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQREQSKLCG-KRSHQ 137

Query: 139 QFSATSSSSNFLN------QTTTQSSSTNHPQFTTTILLSDNNNNNSH------KDGMVW 198
                 S  NF++      Q    SS     Q +      + N++ +          + W
Sbjct: 138 DTGNIISDQNFIHARRSRSQDAMLSSKFGFDQNSRIFEFRNPNHDRTFAVSPPPSSSLTW 197

Query: 199 NFRQGSFKGYSDNI-----------LYSTSHYNNNNYYY---YPNSSSSARFRFPNN--- 258
            F        S+N             ++TS   ++ + Y   YPNSS+   +R  ++   
Sbjct: 198 AFGAAPIVTSSNNSSVDLSRREAGDFFNTSTKVSDQHPYRSCYPNSSAYGSYRGSSSFGV 257

Query: 259 -------KIPFGVFEFGSQLCPSTTTLKKFMANTDHNNRHHLH----AQESQVQEQESPK 295
                    PFG  + G     S   +KK +     N+  HL+     Q++Q  +Q    
Sbjct: 258 TNYRRFVPSPFGYVKVGDDY-ESHGVIKKEVIKFSDNSPSHLNLRLSTQQAQADDQSIKH 317

[Close]
BLAST of Cla013871 vs. TrEMBL
Match: V4TD41_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001803mg PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 4.4e-69
Identity = 155/316 (49.05%), Postives = 192/316 (60.76%), Query Frame = 1 

Query: 19  SSCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRIIRKPF 78
           S+CPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRI R+PF
Sbjct: 18  STCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPF 77

Query: 79  SEEEEERLLGAHRIHGNKWSLIARLFPGRTDNAVKNHWHVIMARKQREQSKLCGNKRTYQ 138
           +E+EEERLL AHRIHGNKW+LIARLFPGRTDNAVKNHWHVIMARKQREQSKLCG KR++Q
Sbjct: 78  TEDEEERLLAAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQREQSKLCG-KRSHQ 137

Query: 139 QFSATSSSSNFLN------QTTTQSSSTNHPQFTTTILLSDNNNNNSH------KDGMVW 198
                 S  NF++      Q    SS     Q +      + N++ +          + W
Sbjct: 138 DTGNIISDQNFIHARRSRSQDAMLSSKFGFDQNSRIFEFRNPNHDRTFAVSPPPSSSLTW 197

Query: 199 NFRQGSFKGYSDNI-----------LYSTSHYNNNNYYY---YPNSSSSARFRFPNN--- 258
            F        S+N             ++TS   ++ + Y   YPNSS+   +R  ++   
Sbjct: 198 AFGAAPIVTSSNNSSVDLSRREAGDFFNTSTKVSDQHPYRSCYPNSSAYGSYRGSSSFGV 257

Query: 259 -------KIPFGVFEFGSQLCPSTTTLKKFMANTDHNNRHHLH----AQESQVQEQESPK 295
                    PFG  + G     S   +KK +     N+  HL+     Q++Q  +Q    
Sbjct: 258 TNYRRFVPSPFGYVKVGDDY-ESHGVIKKEVIKFSDNSPSHLNLRLSTQQAQADDQSIKH 317

[Close]
BLAST of Cla013871 vs. NCBI nr
Match: gi|659081894|ref|XP_008441565.1| (PREDICTED: transcriptional activator Myb-like isoform X1 [Cucumis melo])

HSP 1 Score: 449.9 bits (1156), Expect = 3.4e-123
Identity = 245/322 (76.09%), Postives = 262/322 (81.37%), Query Frame = 1 

Query: 1   MKDSA-------DNLHLNYHDHQYKSSCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKL 60
           MKDS+       +NLH+ YHD QYK+SCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKL
Sbjct: 1   MKDSSGDHNNYNNNLHVGYHD-QYKASCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKL 60

Query: 61  QGRSGKSCRLRWFNQLDPRIIRKPFSEEEEERLLGAHRIHGNKWSLIARLFPGRTDNAVK 120
           QGRSGKSCRLRWFNQLDPRIIRKPFSEEEEERLLGAHRIHGNKWSLIARLFPGRTDNAVK
Sbjct: 61  QGRSGKSCRLRWFNQLDPRIIRKPFSEEEEERLLGAHRIHGNKWSLIARLFPGRTDNAVK 120

Query: 121 NHWHVIMARKQREQSKLCGNKRTYQQFSATSSSSNFLNQTTTQSSST----------NHP 180
           NHWHVIMARKQREQSKLCGNKRTYQQFS    ++N    TTTQSSS+          +HP
Sbjct: 121 NHWHVIMARKQREQSKLCGNKRTYQQFSNLILNNNNNQITTTQSSSSTTNHHHLHHHHHP 180

Query: 181 QFTTTILLSD--NNNNNSHKDGMVWNFRQGSFKGYSD--NILY--STSHYNNNNYYYYPN 240
           QFTTTIL+SD  NNNN++ KDGMVWNFRQG FKGYSD  NILY  S+SHY   NY YYPN
Sbjct: 181 QFTTTILVSDYNNNNNSNSKDGMVWNFRQG-FKGYSDNNNILYRSSSSHY---NYNYYPN 240

Query: 241 ----SSSSARFRFPNNKIPFGVFEFGSQLCPSTTTLKKFMANTDHNNRHHLHAQESQVQE 295
               SSSSARF FPN+KIPFGVFEFGS    STTTL KFMANTD  N +H   Q   +Q+
Sbjct: 241 SSSSSSSSARFCFPNSKIPFGVFEFGSS---STTTLMKFMANTDDRNNNH-DQQPQVLQQ 300

[Close]
BLAST of Cla013871 vs. NCBI nr
Match: gi|778714940|ref|XP_004144300.2| (PREDICTED: transcription factor MYB57-like isoform X1 [Cucumis sativus])

HSP 1 Score: 444.5 bits (1142), Expect = 1.4e-121
Identity = 246/321 (76.64%), Postives = 261/321 (81.31%), Query Frame = 1 

Query: 1   MKDSA-------DNLHLNYHDHQYKSSCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKL 60
           MKDS+       +NLH+NYHD QYKSSCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKL
Sbjct: 1   MKDSSGDHNNYNNNLHVNYHD-QYKSSCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKL 60

Query: 61  QGRSGKSCRLRWFNQLDPRIIRKPFSEEEEERLLGAHRIHGNKWSLIARLFPGRTDNAVK 120
           QGRSGKSCRLRWFNQLDPRIIRKPFSEEEEERLLGAHRIHGNKWSLIARLFPGRTDNAVK
Sbjct: 61  QGRSGKSCRLRWFNQLDPRIIRKPFSEEEEERLLGAHRIHGNKWSLIARLFPGRTDNAVK 120

Query: 121 NHWHVIMARKQREQSKLCGNKRTYQQFSATSSSSNFLNQTTTQSSST---------NHPQ 180
           NHWHVIMARKQREQSKLCGNKRTYQQFS    ++   NQ TTQSSS+         +HPQ
Sbjct: 121 NHWHVIMARKQREQSKLCGNKRTYQQFSNLILNN---NQITTQSSSSTTNHHHHHHHHPQ 180

Query: 181 F-TTTILLSDNNNNNSH-KDGMVWNFRQGSFKGYSD--NILY--STSHYNNNNYYYYPN- 240
             TTTIL+SD NNNNS+ KDGMVWNFRQG FKGYSD  NILY  S+SH+   NY YYPN 
Sbjct: 181 LTTTTILVSDYNNNNSNSKDGMVWNFRQG-FKGYSDNNNILYRSSSSHF---NYNYYPNS 240

Query: 241 ---SSSSARFRFPNNKIPFGVFEFGSQLCPSTTTLKKFMANTDHNNRHHLHAQESQVQEQ 295
              SSSSARF FPNNKIP GVFEFGS   PSTT L KFMANTD  N +H   Q   +Q++
Sbjct: 241 SSSSSSSARFCFPNNKIPIGVFEFGS---PSTTALMKFMANTDDRNNNH-DQQPQVLQQE 300

[Close]
BLAST of Cla013871 vs. NCBI nr
Match: gi|359492779|ref|XP_002278632.2| (PREDICTED: trichome differentiation protein GL1 [Vitis vinifera])

HSP 1 Score: 280.0 bits (715), Expect = 4.7e-72
Identity = 167/316 (52.85%), Postives = 197/316 (62.34%), Query Frame = 1 

Query: 20  SCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRIIRKPFS 79
           +CPRGHWRPAEDEKLRQLVE+YGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRI RKPF+
Sbjct: 10  TCPRGHWRPAEDEKLRQLVEEYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRKPFT 69

Query: 80  EEEEERLLGAHRIHGNKWSLIARLFPGRTDNAVKNHWHVIMARKQREQSKLCGNKRTY-- 139
           EEEEERLL AHRIHGNKW+LI+RLFPGRTDNAVKNHWHVIMARKQREQSKLCG KR+Y  
Sbjct: 70  EEEEERLLAAHRIHGNKWALISRLFPGRTDNAVKNHWHVIMARKQREQSKLCG-KRSYKD 129

Query: 140 -------------------QQFSATSSSSN-----FLNQTT----TQSSSTNHPQFTTTI 199
                              QQ+S+ +   N     FLN       + S S++ P +T   
Sbjct: 130 VLSDSNTSSNGFRGSNSRSQQYSSANRLENSRLFEFLNPNKEGIFSISPSSSSPSWTFAR 189

Query: 200 LLSDNNNNNSHKDGMVWNFRQGSFKGYSDNILYSTSHYNNNNYYYYPNSS------SSAR 259
            +S   NN+S  D +    R       SD I+ S +  + + Y Y+ NSS      +S  
Sbjct: 190 SISKATNNSSSTDLLRRGGRDHFNSCSSDGIMDSQNSLDRSLYRYFSNSSAYGGYRTSTA 249

Query: 260 FRFPNNKI----PFGVFEFGSQLCPSTTTLKKFMANTDHNNRH-HLHAQESQVQEQESPK 295
           F FPN K     P G  + G    P     ++F+   D++     +     Q QE ES K
Sbjct: 250 FGFPNYKRVVSGPVGYSKLGD---PHGMLKREFVNFGDNSPTFAKMIMTNQQEQEDESIK 309

[Close]
BLAST of Cla013871 vs. NCBI nr
Match: gi|1009175080|ref|XP_015868687.1| (PREDICTED: transcription factor MYB51-like [Ziziphus jujuba])

HSP 1 Score: 278.9 bits (712), Expect = 1.0e-71
Identity = 162/336 (48.21%), Postives = 192/336 (57.14%), Query Frame = 1 

Query: 20  SCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRIIRKPFS 79
           +CPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRI R+PF+
Sbjct: 14  TCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFT 73

Query: 80  EEEEERLLGAHRIHGNKWSLIARLFPGRTDNAVKNHWHVIMARKQREQSKLCGNKRTYQQ 139
           EEEEERLL AHRIHGNKW+LIARLFPGRTDNAVKNHWHVIMARKQREQSKLCGNKR+YQ 
Sbjct: 74  EEEEERLLAAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQREQSKLCGNKRSYQD 133

Query: 140 FSATSSSSNFLNQTTTQSSS-------------------TNHPQFTTTILLSDNNNNNSH 199
               +S  + +N  T ++++                    ++P     +   DNNNN+S 
Sbjct: 134 LCNNNSEPSSINFLTRKAAAQGEFKLGNGLVENAKLFQINHNPNKDRKLASMDNNNNSSP 193

Query: 200 KDGMVWNF--------RQGSFKGYS------DNILYSTSHYNNNNYYYYP-------NSS 259
                WNF        R  S    S      D    ST+   + NYY          NS 
Sbjct: 194 SSSPSWNFFSLGASSNRLSSASSLSMRREGRDCFKSSTTTTTSANYYISSEISKGIINSD 253

Query: 260 SSARFRF-PNNKIPFGVF--EFGSQLCPSTTTLKKFMANTDHNNRHHLH----------- 295
               ++  P +     ++   FG Q          F     +++RHH H           
Sbjct: 254 QHLLYKINPTSTSSSSLWYGSFGLQSYKRVVPSSPFECFNLNHDRHHHHHHHYEHHGRSK 313

[Close]
BLAST of Cla013871 vs. NCBI nr
Match: gi|728832297|gb|KHG11740.1| (Transcription factor MYB44 -like protein [Gossypium arboreum])

HSP 1 Score: 270.4 bits (690), Expect = 3.7e-69
Identity = 160/325 (49.23%), Postives = 196/325 (60.31%), Query Frame = 1 

Query: 20  SCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRIIRKPFS 79
           +CPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRI R+PF+
Sbjct: 15  TCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFT 74

Query: 80  EEEEERLLGAHRIHGNKWSLIARLFPGRTDNAVKNHWHVIMARKQREQSKLC-------- 139
           EEEEERLL AH IHGNKW+LIARLFPGRTDNAVKNHWHVIMARKQREQSKLC        
Sbjct: 75  EEEEERLLAAHHIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQREQSKLCGKRSFQDA 134

Query: 140 ------------------------------GNKRTYQQFSATSSSSNFLNQTTTQSSSTN 199
                                         G+ R + QF        F   +T+ +SS +
Sbjct: 135 FSDSKLSSTGFSTSRKLARCQEAFSSRFGFGDSRFFDQFQNQGKDKIFSVSSTSTTSSPS 194

Query: 200 HPQFTTTILLSDNNNNN--SHKDGMVWNFRQGSFKGYSDN---ILYSTSHYNNNNYYYYP 259
               ++T++ S+N+++   S +DG     R GS     D    +  S   Y++N   Y  
Sbjct: 195 WNFASSTMVASNNSSSAQLSIRDGKNHLLRSGSSYYSMDTSKLLDQSLYKYHSNASAYCS 254

Query: 260 NSSSSARFRFPNNK----IPFGVFEFGSQLCPSTTTL-KKFMANTDHNNRH-HLHAQESQ 295
           +  +S+ F   N +     PFG  + G     +   + K+F++ TD+  +  +L    SQ
Sbjct: 255 SFRNSSAFGIHNYRRVVPSPFGYLKLGDNFESNNGVMTKEFLSITDNAPKSANLRVSNSQ 314

The following BLAST results are available for this feature:
BLAST of Cla013871 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MYB44_ARATH4.4e-3058.42Transcription factor MYB44 OS=Arabidopsis thaliana GN=MYB44 PE=2 SV=1[more]
MYB_XENLA1.4e-2840.82Transcriptional activator Myb OS=Xenopus laevis GN=myb PE=2 SV=1[more]
MYBAA_DICDI1.7e-2634.50Myb-like protein AA OS=Dictyostelium discoideum GN=mybAA PE=3 SV=1[more]
MYB_HUMAN3.0e-2642.86Transcriptional activator Myb OS=Homo sapiens GN=MYB PE=1 SV=2[more]
MYBA_DICDI6.6e-2641.10Myb-like protein A OS=Dictyostelium discoideum GN=mybA PE=3 SV=2[more]
BLAST of Cla013871 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KGJ9_CUCSA1.0e-12176.64Uncharacterized protein OS=Cucumis sativus GN=Csa_6G344210 PE=4 SV=1[more]
E0CQL8_VITVI3.3e-7252.85Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g15260 PE=4 SV=... [more]
A0A0B0NFX4_GOSAR2.6e-6949.23Transcription factor MYB44-like protein OS=Gossypium arboreum GN=F383_14856 PE=4... [more]
A0A067H7L1_CITSI4.4e-6949.05Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g020106mg PE=4 SV=1[more]
V4TD41_9ROSI4.4e-6949.05Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001803mg PE=4 SV=1[more]
BLAST of Cla013871 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659081894|ref|XP_008441565.1|3.4e-12376.09PREDICTED: transcriptional activator Myb-like isoform X1 [Cucumis melo][more]
gi|778714940|ref|XP_004144300.2|1.4e-12176.64PREDICTED: transcription factor MYB57-like isoform X1 [Cucumis sativus][more]
gi|359492779|ref|XP_002278632.2|4.7e-7252.85PREDICTED: trichome differentiation protein GL1 [Vitis vinifera][more]
gi|1009175080|ref|XP_015868687.1|1.0e-7148.21PREDICTED: transcription factor MYB51-like [Ziziphus jujuba][more]
gi|728832297|gb|KHG11740.1|3.7e-6949.23Transcription factor MYB44 -like protein [Gossypium arboreum][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR009057Homeobox-like_sf
IPR017930Myb_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:2000652 regulation of secondary cell wall biogenesis
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0008150 biological_process
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005575 cellular_component
cellular_component GO:0000785 chromatin
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0003682 chromatin binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla013871Cla013871.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 23..68
score: 2.9E-17coord: 75..117
score: 4.1
IPR001005SANT/Myb domainSMARTSM00717santcoord: 74..122
score: 4.9E-14coord: 22..71
score: 8.4
IPR009057Homeodomain-likeGENE3DG3DSA:1.10.10.60coord: 24..76
score: 9.5E-27coord: 77..123
score: 1.6
IPR009057Homeodomain-likeunknownSSF46689Homeodomain-likecoord: 21..116
score: 7.49
IPR017930Myb domainPROFILEPS51294HTH_MYBcoord: 74..124
score: 21.037coord: 18..73
score: 25
NoneNo IPR availablePANTHERPTHR10641MYB-LIKE DNA-BINDING PROTEIN MYBcoord: 19..166
score: 3.8E-93coord: 283..293
score: 3.8
NoneNo IPR availablePANTHERPTHR10641:SF496SUBFAMILY NOT NAMEDcoord: 19..166
score: 3.8E-93coord: 283..293
score: 3.8