Cp4.1LG13g04250 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG13g04250
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Myb transcription factor
Location	Cp4.1LG13 : 6219010 .. 6220166 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCATGAAGGATTCTGGGGATCTTCATGTTTATGATCATGAGTATAAATCGTCGTGTCCACGAGGTCATTGGAGACCGGCTGAGGATCAAAAGCTTCGACGGTTGGTTGAACAATACGGCGCTCAAAATTGGAACTCCATTGCTGAGAAGCTTCAAGGCAGATCAGGTACCCCGATTCTCTCGTCTAACATATCATCTATTTCCTCTTTCGGGTTCGAGCGGAGAGAAATAATCACTGTAGATCGTCTTTAATTCAAAATTTTTTGAATCGAATCTCGATCGAGGACGTATTGGAATGATTGTACGGATCGAAAAAGTTGGTAAATAAACAAACCGACATGAATAATTTCAATAATTTGATGATATATGTAGATTCGAGTAAAGGGTTTGTTGAATTTCTAAATTTGTTATATTAATTTAACCTAATTCTTTAATTTTTTGTTTGTTGTTTGTTAGGAAAGAGCTGTAGATTGAGATGGTTTAATCAGCTCGACCCTAGGATCATTAGGAAGCCATTTAGTGAAGAAGAAGAGGAAAGGCTTTTGGCGGCTCATCGGATACATGGAAACAAATGGTCACTTATTGCTAGACTATTTCCGGGTCGAACCGATAACGCTGTGAAGAATCATTGGCATGTTATAATGGCAAGAAAGCAACTGGAACAATCCAAACTTCCCAAACGAACGCATCAACACTTTCCAGTTACTTCTTCTAATTTTCTCGGCAACCAAACAGAATCTTCCTCACTAGATCGTCGTCAGTTTAGTACTACAATTCTTGTCTCCGACAACAACCGCTCCCATAAAGATGGAATGGTTTGGAATTTCAGACAGAGCTTGAAAGGTTATTCAGACCATAACAATATTCCCGTTCTCCATAGACATTATTATCCTAATTATTCCTCAAAGTATGCAAACTTTAGAACCTCCCCATCATCAGCTCGATTTTGCTTCCCGACTGCTAAAATTCCTTTTGGGGTTTTTGAATTTGGTAGCACATCAACGACTCCACTTGTGAAGTTCATGGCTAATACCGATAATCATCATCGTCATCATCATCTTCATGCTCAAGAACAACGACAAGAACAAGAATCACTCAACAACGACAAAGATACTCCCTTCATAGATTTCCTCGGAGTAGGAATTTCTTCTTGA

mRNA sequence

ATGATCATGAAGGATTCTGGGGATCTTCATGTTTATGATCATGAGTATAAATCGTCGTGTCCACGAGGTCATTGGAGACCGGCTGAGGATCAAAAGCTTCGACGGTTGGTTGAACAATACGGCGCTCAAAATTGGAACTCCATTGCTGAGAAGCTTCAAGGCAGATCAGGAAAGAGCTGTAGATTGAGATGGTTTAATCAGCTCGACCCTAGGATCATTAGGAAGCCATTTAGTGAAGAAGAAGAGGAAAGGCTTTTGGCGGCTCATCGGATACATGGAAACAAATGGTCACTTATTGCTAGACTATTTCCGGGTCGAACCGATAACGCTGTGAAGAATCATTGGCATGTTATAATGGCAAGAAAGCAACTGGAACAATCCAAACTTCCCAAACGAACGCATCAACACTTTCCAGTTACTTCTTCTAATTTTCTCGGCAACCAAACAGAATCTTCCTCACTAGATCGTCGTCAGTTTAGTACTACAATTCTTGTCTCCGACAACAACCGCTCCCATAAAGATGGAATGGTTTGGAATTTCAGACAGAGCTTGAAAGGTTATTCAGACCATAACAATATTCCCGTTCTCCATAGACATTATTATCCTAATTATTCCTCAAAGTATGCAAACTTTAGAACCTCCCCATCATCAGCTCGATTTTGCTTCCCGACTGCTAAAATTCCTTTTGGGGTTTTTGAATTTGGTAGCACATCAACGACTCCACTTGTGAAGTTCATGGCTAATACCGATAATCATCATCGTCATCATCATCTTCATGCTCAAGAACAACGACAAGAACAAGAATCACTCAACAACGACAAAGATACTCCCTTCATAGATTTCCTCGGAGTAGGAATTTCTTCTTGA

Coding sequence (CDS)

ATGATCATGAAGGATTCTGGGGATCTTCATGTTTATGATCATGAGTATAAATCGTCGTGTCCACGAGGTCATTGGAGACCGGCTGAGGATCAAAAGCTTCGACGGTTGGTTGAACAATACGGCGCTCAAAATTGGAACTCCATTGCTGAGAAGCTTCAAGGCAGATCAGGAAAGAGCTGTAGATTGAGATGGTTTAATCAGCTCGACCCTAGGATCATTAGGAAGCCATTTAGTGAAGAAGAAGAGGAAAGGCTTTTGGCGGCTCATCGGATACATGGAAACAAATGGTCACTTATTGCTAGACTATTTCCGGGTCGAACCGATAACGCTGTGAAGAATCATTGGCATGTTATAATGGCAAGAAAGCAACTGGAACAATCCAAACTTCCCAAACGAACGCATCAACACTTTCCAGTTACTTCTTCTAATTTTCTCGGCAACCAAACAGAATCTTCCTCACTAGATCGTCGTCAGTTTAGTACTACAATTCTTGTCTCCGACAACAACCGCTCCCATAAAGATGGAATGGTTTGGAATTTCAGACAGAGCTTGAAAGGTTATTCAGACCATAACAATATTCCCGTTCTCCATAGACATTATTATCCTAATTATTCCTCAAAGTATGCAAACTTTAGAACCTCCCCATCATCAGCTCGATTTTGCTTCCCGACTGCTAAAATTCCTTTTGGGGTTTTTGAATTTGGTAGCACATCAACGACTCCACTTGTGAAGTTCATGGCTAATACCGATAATCATCATCGTCATCATCATCTTCATGCTCAAGAACAACGACAAGAACAAGAATCACTCAACAACGACAAAGATACTCCCTTCATAGATTTCCTCGGAGTAGGAATTTCTTCTTGA

Protein sequence

MIMKDSGDLHVYDHEYKSSCPRGHWRPAEDQKLRRLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRIIRKPFSEEEEERLLAAHRIHGNKWSLIARLFPGRTDNAVKNHWHVIMARKQLEQSKLPKRTHQHFPVTSSNFLGNQTESSSLDRRQFSTTILVSDNNRSHKDGMVWNFRQSLKGYSDHNNIPVLHRHYYPNYSSKYANFRTSPSSARFCFPTAKIPFGVFEFGSTSTTPLVKFMANTDNHHRHHHLHAQEQRQEQESLNNDKDTPFIDFLGVGISS

Homology

[Close]

BLAST of Cp4.1LG13g04250 vs. Swiss-Prot
Match: MYB44_ARATH (Transcription factor MYB44 OS=Arabidopsis thaliana GN=MYB44 PE=2 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.9e-30
Identity = 59/101 (58.42%), Postives = 75/101 (74.26%), Query Frame = 1


Query: 22  RGHWRPAEDQKLRRLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRIIRKPFSEEE 81
           +G W P ED++LRRLV +YG +NW  I++ + GRSGKSCRLRW NQL P++  +PFS EE
Sbjct: 6   KGPWSPEEDEQLRRLVVKYGPRNWTVISKSIPGRSGKSCRLRWCNQLSPQVEHRPFSAEE 65

Query: 82  EERLLAAHRIHGNKWSLIARLFPGRTDNAVKNHWHVIMARK 123
           +E +  AH   GNKW+ IARL  GRTDNAVKNHW+  + RK
Sbjct: 66  DETIARAHAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRK 106

[Close]

BLAST of Cp4.1LG13g04250 vs. Swiss-Prot
Match: MYB_XENLA (Transcriptional activator Myb OS=Xenopus laevis GN=myb PE=2 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 7.7e-27
Identity = 63/147 (42.86%), Postives = 94/147 (63.95%), Query Frame = 1


Query: 22  RGHWRPAEDQKLRRLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRIIRKPFSEEE 81
           +G W   EDQ++  LV +YG + W+ IA+ L+GR GK CR RW N L+P + +  ++EEE
Sbjct: 89  KGPWTKEEDQRVIELVHKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKSSWTEEE 148

Query: 82  EERLLAAHRIHGNKWSLIARLFPGRTDNAVKNHWHVIMARKQLEQSKL--PKRTHQHFPV 141
           +  +  AH+  GN+W+ IA+L PGRTDNA+KNHW+  M RK+ ++  L    +T+QH  V
Sbjct: 149 DRTIYEAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKEEQEGYLQNSSKTNQHTIV 208

Query: 142 TS---SNFLGNQTES-SSLDRRQFSTT 163
           T+   SN L   T + +S +  Q ST+
Sbjct: 209 TNFPKSNHLMTFTHTRASAEHSQASTS 235

[Close]

BLAST of Cp4.1LG13g04250 vs. Swiss-Prot
Match: MYB_HUMAN (Transcriptional activator Myb OS=Homo sapiens GN=MYB PE=1 SV=2)

HSP 1 Score: 119.8 bits (299), Expect = 5.0e-26
Identity = 53/126 (42.06%), Postives = 82/126 (65.08%), Query Frame = 1


Query: 22  RGHWRPAEDQKLRRLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRIIRKPFSEEE 81
           +G W   EDQ++  LV++YG + W+ IA+ L+GR GK CR RW N L+P + +  ++EEE
Sbjct: 92  KGPWTKEEDQRVIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEE 151

Query: 82  EERLLAAHRIHGNKWSLIARLFPGRTDNAVKNHWHVIMARKQLEQSKLPKRTHQHFPVTS 141
           +  +  AH+  GN+W+ IA+L PGRTDNA+KNHW+  M RK  ++  L + +    P  +
Sbjct: 152 DRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVEQEGYLQESSKASQPAVA 211

Query: 142 SNFLGN 148
           ++F  N
Sbjct: 212 TSFQKN 217

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BLAST of Cp4.1LG13g04250 vs. Swiss-Prot
Match: MYB_BOVIN (Transcriptional activator Myb OS=Bos taurus GN=MYB PE=2 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 5.0e-26
Identity = 53/126 (42.06%), Postives = 82/126 (65.08%), Query Frame = 1


Query: 22  RGHWRPAEDQKLRRLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRIIRKPFSEEE 81
           +G W   EDQ++  LV++YG + W+ IA+ L+GR GK CR RW N L+P + +  ++EEE
Sbjct: 92  KGPWTKEEDQRVIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEE 151

Query: 82  EERLLAAHRIHGNKWSLIARLFPGRTDNAVKNHWHVIMARKQLEQSKLPKRTHQHFPVTS 141
           +  +  AH+  GN+W+ IA+L PGRTDNA+KNHW+  M RK  ++  L + +    P  +
Sbjct: 152 DRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVEQEGYLQESSKASQPAVT 211

Query: 142 SNFLGN 148
           ++F  N
Sbjct: 212 TSFQKN 217

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BLAST of Cp4.1LG13g04250 vs. Swiss-Prot
Match: MYB_CHICK (Transcriptional activator Myb OS=Gallus gallus GN=MYB PE=1 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.1e-25
Identity = 52/123 (42.28%), Postives = 80/123 (65.04%), Query Frame = 1


Query: 22  RGHWRPAEDQKLRRLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRIIRKPFSEEE 81
           +G W   EDQ++  LV++YG + W+ IA+ L+GR GK CR RW N L+P + +  ++EEE
Sbjct: 92  KGPWTKEEDQRVIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEE 151

Query: 82  EERLLAAHRIHGNKWSLIARLFPGRTDNAVKNHWHVIMARKQLEQSKLPKRTHQHFPVTS 141
           +  +  AH+  GN+W+ IA+L PGRTDNA+KNHW+  M RK  ++  L + +    P  +
Sbjct: 152 DRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVEQEGYLQESSKAGLPSAT 211

Query: 142 SNF 145
           + F
Sbjct: 212 TGF 214

[Close]

BLAST of Cp4.1LG13g04250 vs. TrEMBL
Match: A0A0A0KGJ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G344210 PE=4 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 7.3e-101
Identity = 207/307 (67.43%), Postives = 233/307 (75.90%), Query Frame = 1


Query: 6   SGDLHV-YDHEYKSSCPRGHWRPAEDQKLRRLVEQYGAQNWNSIAEKLQGRSGKSCRLRW 65
           + +LHV Y  +YKSSCPRGHWRPAED+KLR+LVEQYGAQNWNSIAEKLQGRSGKSCRLRW
Sbjct: 12  NNNLHVNYHDQYKSSCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRW 71

Query: 66  FNQLDPRIIRKPFSEEEEERLLAAHRIHGNKWSLIARLFPGRTDNAVKNHWHVIMARKQL 125
           FNQLDPRIIRKPFSEEEEERLL AHRIHGNKWSLIARLFPGRTDNAVKNHWHVIMARKQ 
Sbjct: 72  FNQLDPRIIRKPFSEEEEERLLGAHRIHGNKWSLIARLFPGRTDNAVKNHWHVIMARKQR 131

Query: 126 EQSKL--PKRTHQHFP--VTSSNFLGNQTESSSLDRRQF--------STTILVSD---NN 185
           EQSKL   KRT+Q F   + ++N +  Q+ SS+ +            +TTILVSD   NN
Sbjct: 132 EQSKLCGNKRTYQQFSNLILNNNQITTQSSSSTTNHHHHHHHHPQLTTTTILVSDYNNNN 191

Query: 186 RSHKDGMVWNFRQSLKGYSDHNNIPVLHR--------HYYPNYSSKYANFRTSPSSARFC 245
            + KDGMVWNFRQ  KGYSD+NNI  L+R        +YYPN SS      +S SSARFC
Sbjct: 192 SNSKDGMVWNFRQGFKGYSDNNNI--LYRSSSSHFNYNYYPNSSS------SSSSSARFC 251

Query: 246 FPTAKIPFGVFEFGSTSTTPLVKFMANTDNHHRHHHLHAQEQRQEQESLNNDKDTPFIDF 289
           FP  KIP GVFEFGS STT L+KFMANTD+ + +H    Q  +QE ESL +  + PFIDF
Sbjct: 252 FPNNKIPIGVFEFGSPSTTALMKFMANTDDRNNNHDQQPQVLQQE-ESLKDKDNIPFIDF 309

[Close]

BLAST of Cp4.1LG13g04250 vs. TrEMBL
Match: A0A061FIQ0_THECC (Myb domain protein 52 OS=Theobroma cacao GN=TCM_035359 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 2.3e-62
Identity = 156/336 (46.43%), Postives = 192/336 (57.14%), Query Frame = 1


Query: 3   MKDSGDLHVYDHEYKSSCPRGHWRPAEDQKLRRLVEQYGAQNWNSIAEKLQGRSGKSCRL 62
           M+DSG     D +   +CPRGHWRPAED+KLR+LVEQYGAQNWNSIAEKLQGRSGKSCRL
Sbjct: 1   MEDSGAASSDDVK---TCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRL 60

Query: 63  RWFNQLDPRIIRKPFSEEEEERLLAAHRIHGNKWSLIARLFPGRTDNAVKNHWHVIMARK 122
           RWFNQLDPRI R+PF+EEEEERLLAAHRIHGNKW+LIARLFPGRTDNAVKNHWHVIMARK
Sbjct: 61  RWFNQLDPRINRRPFTEEEEERLLAAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARK 120

Query: 123 QLEQSKL-PKRTHQ--------------------------HFPVTSSNFLGNQT------ 182
           Q EQSKL  KR+ Q                                S FL  Q       
Sbjct: 121 QREQSKLCGKRSFQDGLSDSKLSSTGFTPRKARCQEAFSSRIGFGDSRFLEFQNPSKERI 180

Query: 183 -----ESSSLDRRQFSTTILVSDNNRSHKDGMVWNFRQSLKG----YSDHNNIPVLHRHY 242
                 S+S     F+++ ++  NN S  +    + +  L G    Y    N  +L +  
Sbjct: 181 FSVSYSSTSSPSWTFASSTMMPSNNSSSAELSRRDGKDYLSGSGSSYYSMENSKILDQSL 240

Query: 243 YPNYSSKYANFRTSPSSARFCFPTAK----IPFGVFEFG----STSTTPLVKFMANTDNH 289
           Y  +S+  A   +  +S+ F  P  +     PFG  + G    S +     + M+  DN 
Sbjct: 241 YKYHSNASAYCSSLKNSSAFGLPNYRRVVPSPFGYLKLGDNYESNNGVMRKELMSVIDNA 300

[Close]

BLAST of Cp4.1LG13g04250 vs. TrEMBL
Match: A0A059BTH1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02756 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 1.4e-59
Identity = 159/328 (48.48%), Postives = 189/328 (57.62%), Query Frame = 1


Query: 6   SGDLHVYDHEYKSSCPRGHWRPAEDQKLRRLVEQYGAQNWNSIAEKLQGRSGKSCRLRWF 65
           SGD    D +  ++CPRGHWRPAED+KLR+LVEQYGAQNWNSIAEKLQGRSGKSCRLRWF
Sbjct: 47  SGD----DGKSAAACPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWF 106

Query: 66  NQLDPRIIRKPFSEEEEERLLAAHRIHGNKWSLIARLFPGRTDNAVKNHWHVIMARKQLE 125
           NQLDPRI R+PF+EEEEERLLAAHR+HGNKW+LIARLFPGRTDNAVKNHWHVIMARKQ E
Sbjct: 107 NQLDPRINRRPFTEEEEERLLAAHRVHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRE 166

Query: 126 QSKL-PKRTHQHFPVTSSNFL-GNQTE-SSSLDRRQF------STTILVSDNNRSH---- 185
           QSKL  KR HQ + +     L G +T     L   QF         I  S     +    
Sbjct: 167 QSKLCGKRIHQEYSLGDPTGLQGRKTHFQDELLGSQFRFDQGKGFFIFQSPGKERNFALP 226

Query: 186 -KDGMVWNFRQSLKGYSDHNNIPV------LHRHYYPNYSSKYAN----------FRTSP 245
                 W F       S HN+  V        R YY   S+ Y+           F + P
Sbjct: 227 SSSSASWTFGSQSLAKSAHNSSSVDDLNRIERRDYYNRASNNYSGREGARSLSQPFHSHP 286

Query: 246 ----SSARFCFPTAKI---PFGVFEFG----STSTTPLVKFMANTDNHHR----HHHLHA 289
               SSA       ++   PFG    G     ++T    + ++  D   R      H+++
Sbjct: 287 YSSLSSAYSISQYQRVVPSPFGYVCLGDGCNDSNTMKKQEIVSFHDEMPRLEKTRLHVNS 346

[Close]

BLAST of Cp4.1LG13g04250 vs. TrEMBL
Match: B9H7M6_POPTR (Putative MYB transcription factor family protein OS=Populus trichocarpa GN=POPTR_0005s20870g PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 1.8e-59
Identity = 149/326 (45.71%), Postives = 192/326 (58.90%), Query Frame = 1


Query: 13  DHEYKSSCPRGHWRPAEDQKLRRLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRI 72
           D    ++CPRGHWRPAED KLR+LVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRI
Sbjct: 11  DDAKSTACPRGHWRPAEDDKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRI 70

Query: 73  IRKPFSEEEEERLLAAHRIHGNKWSLIARLFPGRTDNAVKNHWHVIMARKQLEQSKLPKR 132
            R+PFSEEEEERLLAAHRIHGNKW+LIARLFPGRTDNAVKNHWHVIMAR+Q EQSKL  +
Sbjct: 71  NRRPFSEEEEERLLAAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARRQREQSKLCGK 130

Query: 133 THQHFPVTSSNFLGNQTESSSLDRRQFSTTILVSDN-----NRSHKDGMV---------- 192
                 ++ SN   +     S  +  F++ I   D+         KD ++          
Sbjct: 131 RSYQDNLSESNATNSSHAGKSRAQDVFNSRIGFDDSRVLEFRNPGKDRILSISPSGSSPS 190

Query: 193 WNFRQS-LKGYSDHNNIPVLHRHYYPNY--SSKYANFRTSP-----------SSARFC-- 252
           WNF  S +   ++ +++ +  R    NY  SS +    +S            +++  C  
Sbjct: 191 WNFAPSTIAASNNSSSVDLSRREGRDNYFNSSLFCTTESSKLISDQPIYRYYTNSSVCGS 250

Query: 253 FPTAKIPFGVFEFGSTSTTPLVKFMANTDNHHRH----------------HHLHAQEQRQ 289
           + ++ I FG+  +     +P   ++   D++  H                ++L A    Q
Sbjct: 251 YRSSSI-FGLPNYRRVVPSPFGSYLKLGDDYENHGMIKKELASCHNSSTLNNLRATSNHQ 310

[Close]

BLAST of Cp4.1LG13g04250 vs. TrEMBL
Match: A0A072V0T7_MEDTR (Myb transcription factor OS=Medicago truncatula GN=MTR_3g089045 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 3.1e-59
Identity = 148/300 (49.33%), Postives = 175/300 (58.33%), Query Frame = 1


Query: 15  EYKSSCPRGHWRPAEDQKLRRLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRIIR 74
           E   SCPRGHWRPAED+KLR+LVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRI R
Sbjct: 9   EDTKSCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRINR 68

Query: 75  KPFSEEEEERLLAAHRIHGNKWSLIARLFPGRTDNAVKNHWHVIMARKQLEQSKL-PKRT 134
           +PF+EEEEERLLAAHRIHGNKW+LIARLFPGRTDNAVKNHWHVIMARKQ EQSKL  KR+
Sbjct: 69  RPFTEEEEERLLAAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQREQSKLCGKRS 128

Query: 135 HQ---------HFPVT------SSNFLGNQTESSSLDRRQFST----------TILVSDN 194
            Q         +FP T      +  F  N T SSSL    F++          + ++ DN
Sbjct: 129 FQEVFSNSSILNFPYTTRIGYENGRFYDN-TPSSSLASWNFASMSTKPNTTTASTILPDN 188

Query: 195 NRSHKDGMVWNFRQSLKGYSDHNNIPVLHRHYYPNYSSKYANFRTSPSSARFCFPTAKIP 254
             + K   V+        Y    N        Y   +     F  S    R       + 
Sbjct: 189 CITRKGSNVYKGSDRSFLYRICPNQAFSSLPNYKRVAPNAFGFLNSSDDGRI---KKDLV 248

Query: 255 FGVFEFGSTSTTPLVKFMANTDNHHRHHHLHAQEQRQEQESLNNDKDTPFIDFLGVGISS 289
             + +  ST  T L   M              +EQ +++  + + K+ PFIDFLGVG+SS
Sbjct: 249 SSLCDNSSTLITNLKSSM-------------EKEQDRDEVEIEHHKEVPFIDFLGVGVSS 291

[Close]

BLAST of Cp4.1LG13g04250 vs. TAIR10
Match: AT1G17950.1 (AT1G17950.1 myb domain protein 52)

HSP 1 Score: 204.9 bits (520), Expect = 6.6e-53
Identity = 100/154 (64.94%), Postives = 118/154 (76.62%), Query Frame = 1


Query: 20  CPRGHWRPAEDQKLRRLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRIIRKPFSE 79
           C RGHWRPAED+KLR LVEQ+G  NWN+IA+KL GRSGKSCRLRWFNQLDPRI R PF+E
Sbjct: 3   CSRGHWRPAEDEKLRELVEQFGPHNWNAIAQKLSGRSGKSCRLRWFNQLDPRINRNPFTE 62

Query: 80  EEEERLLAAHRIHGNKWSLIARLFPGRTDNAVKNHWHVIMARKQLEQSKL-PKRTHQHFP 139
           EEEERLLA+HRIHGN+WS+IAR FPGRTDNAVKNHWHVIMAR+  E+SKL P+       
Sbjct: 63  EEEERLLASHRIHGNRWSVIARFFPGRTDNAVKNHWHVIMARRGRERSKLRPRGLGHDGT 122

Query: 140 VTSSNFLGNQTESSSLDRRQFSTTILVSDNNRSH 173
           V ++  +GN  +    +RR  +TT +      SH
Sbjct: 123 VAATGMIGNYKDCDK-ERRLATTTAINFPYQFSH 155

[Close]

BLAST of Cp4.1LG13g04250 vs. TAIR10
Match: AT1G73410.1 (AT1G73410.1 myb domain protein 54)

HSP 1 Score: 201.8 bits (512), Expect = 5.6e-52
Identity = 123/270 (45.56%), Postives = 154/270 (57.04%), Query Frame = 1


Query: 20  CPRGHWRPAEDQKLRRLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRIIRKPFSE 79
           C RGHWRPAED+KL+ LVEQYG  NWN+IA KL GRSGKSCRLRWFNQLDPRI R PF+E
Sbjct: 4   CSRGHWRPAEDEKLKDLVEQYGPHNWNAIALKLPGRSGKSCRLRWFNQLDPRINRNPFTE 63

Query: 80  EEEERLLAAHRIHGNKWSLIARLFPGRTDNAVKNHWHVIMARKQLEQSKLPKRTHQHFPV 139
           EEEERLLAAHRIHGN+WS+IARLFPGRTDNAVKNHWHVIMAR+  + SK           
Sbjct: 64  EEEERLLAAHRIHGNRWSIIARLFPGRTDNAVKNHWHVIMARRTRQTSK----------- 123

Query: 140 TSSNFLGNQTESSSLDRRQFSTTILVSDNNRSHKDGMVWNFRQSLKGY-SDHNNIPVLHR 199
                L + T SSSL     S  I++S    +H     ++     K + +D  N P    
Sbjct: 124 --PRLLPSTTSSSSL---MASEQIMMSSGGYNHN----YSSDDRKKIFPADFINFPYKFS 183

Query: 200 HYYPNYSSKYANFRTSPSSARFCFPTAKIPFGVFEFGSTSTTPLVKFMANTDNHHRHHHL 259
           H   N+      F T   +       +K P   + F   +T      + + D+       
Sbjct: 184 HI--NHLHFLKEFFTGKIALNHKANQSKKPMEFYNFLQVNTDSNKSEIIDQDS------- 242

Query: 260 HAQEQRQEQESLNNDKDTPFIDFLGVGISS 289
             Q +R + ++  ++   PF DFL VG S+
Sbjct: 244 -GQSKRSDSDT-KHESHVPFFDFLSVGNSA 242

[Close]

BLAST of Cp4.1LG13g04250 vs. TAIR10
Match: AT1G69560.1 (AT1G69560.1 myb domain protein 105)

HSP 1 Score: 196.1 bits (497), Expect = 3.1e-50
Identity = 92/129 (71.32%), Postives = 104/129 (80.62%), Query Frame = 1


Query: 4   KDSGDLHVYDHEYKSSCPRGHWRPAEDQKLRRLVEQYGAQNWNSIAEKLQGRSGKSCRLR 63
           KD+       H  K+S  RGHWRPAED KL+ LV  YG QNWN IAEKLQGRSGKSCRLR
Sbjct: 89  KDTTVYRSCGHSSKASVSRGHWRPAEDTKLKELVAVYGPQNWNLIAEKLQGRSGKSCRLR 148

Query: 64  WFNQLDPRIIRKPFSEEEEERLLAAHRIHGNKWSLIARLFPGRTDNAVKNHWHVIMARKQ 123
           WFNQLDPRI R+ F+EEEEERL+ AHR++GNKW++IARLFPGRTDN+VKNHWHVIMARK 
Sbjct: 149 WFNQLDPRINRRAFTEEEEERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVIMARKF 208

Query: 124 LEQSKLPKR 133
            EQS   +R
Sbjct: 209 REQSSSYRR 217

[Close]

BLAST of Cp4.1LG13g04250 vs. TAIR10
Match: AT1G26780.2 (AT1G26780.2 myb domain protein 117)

HSP 1 Score: 189.5 bits (480), Expect = 2.9e-48
Identity = 93/153 (60.78%), Postives = 106/153 (69.28%), Query Frame = 1


Query: 5   DSGDLHVYDHEYKSSCPRGHWRPAEDQKLRRLVEQYGAQNWNSIAEKLQGRSGKSCRLRW 64
           DSG          S   RGHWRPAED KL+ LV  YG QNWN IAEKLQGRSGKSCRLRW
Sbjct: 81  DSGQSWSSSSSKPSVLGRGHWRPAEDVKLKELVSIYGPQNWNLIAEKLQGRSGKSCRLRW 140

Query: 65  FNQLDPRIIRKPFSEEEEERLLAAHRIHGNKWSLIARLFPGRTDNAVKNHWHVIMARKQL 124
           FNQLDPRI R+ F+EEEEERL+ AHR++GNKW++IARLFPGRTDN+VKNHWHV+MARK  
Sbjct: 141 FNQLDPRINRRAFTEEEEERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVVMARKYR 200

Query: 125 EQSKL-------------PKRTHQHFPVTSSNF 145
           E S               P  T+ H P  + N+
Sbjct: 201 EHSSAYRRRKLMSNNPLKPHLTNNHHPNPNPNY 233

[Close]

BLAST of Cp4.1LG13g04250 vs. TAIR10
Match: AT4G33450.1 (AT4G33450.1 myb domain protein 69)

HSP 1 Score: 182.6 bits (462), Expect = 3.5e-46
Identity = 114/278 (41.01%), Postives = 143/278 (51.44%), Query Frame = 1


Query: 17  KSSCPRGHWRPAEDQKLRRLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRIIRKP 76
           K SC RGHWRP ED  LR+LVEQYG +NWN IA+ L GRSGKSCRLRW+NQLDP I +KP
Sbjct: 14  KPSCQRGHWRPVEDDNLRQLVEQYGPKNWNFIAQHLYGRSGKSCRLRWYNQLDPNITKKP 73

Query: 77  FSEEEEERLLAAHRIHGNKWSLIARLFPGRTDNAVKNHWHVIMARKQLEQSKLPKRTHQH 136
           F+EEEEERLL AHRI GN+W+ IARLFPGRTDNAVKNH+HVIMAR++ E           
Sbjct: 74  FTEEEEERLLKAHRIQGNRWASIARLFPGRTDNAVKNHFHVIMARRKRE--NFSSTATST 133

Query: 137 FPVTSSNFLGNQTESSSLDRRQFSTTILVSDNNRSHKDGMVWNF---RQSLKGYSDHNNI 196
           F  T    L   +  + L+R  F          R  K   +W +        G    +++
Sbjct: 134 FNQTWHTVLSPSSSLTRLNRSHFGLW-----RYRKDKSCGLWPYSFVSPPTNGQFGSSSV 193

Query: 197 PVLHRHYYPNYSSKYANFRTSPSSARFCFPTAKIPFGVFEFGSTSTTPLVKFMANTDNHH 256
             +H   Y     + +     P +  F                 + TP  K  +N D   
Sbjct: 194 SNVHHEIY--LERRKSKELVDPQNYTF----------------HAATPDHKMTSNEDG-- 250

Query: 257 RHHHLHAQEQRQEQESLNND---KDTPFIDFLGVGISS 289
                          S+ +D    D  FIDFLGVG++S
Sbjct: 254 --------------PSMGDDGEKNDVTFIDFLGVGLAS 250

[Close]

BLAST of Cp4.1LG13g04250 vs. NCBI nr
Match: gi|659081894|ref|XP_008441565.1| (PREDICTED: transcriptional activator Myb-like isoform X1 [Cucumis melo])

HSP 1 Score: 379.8 bits (974), Expect = 4.3e-102
Identity = 212/311 (68.17%), Postives = 235/311 (75.56%), Query Frame = 1


Query: 6   SGDLHV-YDHEYKSSCPRGHWRPAEDQKLRRLVEQYGAQNWNSIAEKLQGRSGKSCRLRW 65
           + +LHV Y  +YK+SCPRGHWRPAED+KLR+LVEQYGAQNWNSIAEKLQGRSGKSCRLRW
Sbjct: 12  NNNLHVGYHDQYKASCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRW 71

Query: 66  FNQLDPRIIRKPFSEEEEERLLAAHRIHGNKWSLIARLFPGRTDNAVKNHWHVIMARKQL 125
           FNQLDPRIIRKPFSEEEEERLL AHRIHGNKWSLIARLFPGRTDNAVKNHWHVIMARKQ 
Sbjct: 72  FNQLDPRIIRKPFSEEEEERLLGAHRIHGNKWSLIARLFPGRTDNAVKNHWHVIMARKQR 131

Query: 126 EQSKL--PKRTHQHFPVTSSNFLGNQ---TESSSLDRR----------QFSTTILVSD-- 185
           EQSKL   KRT+Q F     N   NQ   T+SSS              QF+TTILVSD  
Sbjct: 132 EQSKLCGNKRTYQQFSNLILNNNNNQITTTQSSSSTTNHHHLHHHHHPQFTTTILVSDYN 191

Query: 186 --NNRSHKDGMVWNFRQSLKGYSDHNNIPVLHR--------HYYPNYSSKYANFRTSPSS 245
             NN + KDGMVWNFRQ  KGYSD+NNI  L+R        +YYPN SS      +S SS
Sbjct: 192 NNNNSNSKDGMVWNFRQGFKGYSDNNNI--LYRSSSSHYNYNYYPNSSS------SSSSS 251

Query: 246 ARFCFPTAKIPFGVFEFGSTSTTPLVKFMANTDNHHRHHHLHAQEQRQEQESLNNDKDTP 289
           ARFCFP +KIPFGVFEFGS+STT L+KFMANTD+ + +H    Q  +QE ESL +  + P
Sbjct: 252 ARFCFPNSKIPFGVFEFGSSSTTTLMKFMANTDDRNNNHDQQPQVLQQE-ESLKDKDNIP 311

[Close]

BLAST of Cp4.1LG13g04250 vs. NCBI nr
Match: gi|778714940|ref|XP_004144300.2| (PREDICTED: transcription factor MYB57-like isoform X1 [Cucumis sativus])

HSP 1 Score: 375.2 bits (962), Expect = 1.0e-100
Identity = 207/307 (67.43%), Postives = 233/307 (75.90%), Query Frame = 1


Query: 6   SGDLHV-YDHEYKSSCPRGHWRPAEDQKLRRLVEQYGAQNWNSIAEKLQGRSGKSCRLRW 65
           + +LHV Y  +YKSSCPRGHWRPAED+KLR+LVEQYGAQNWNSIAEKLQGRSGKSCRLRW
Sbjct: 12  NNNLHVNYHDQYKSSCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRW 71

Query: 66  FNQLDPRIIRKPFSEEEEERLLAAHRIHGNKWSLIARLFPGRTDNAVKNHWHVIMARKQL 125
           FNQLDPRIIRKPFSEEEEERLL AHRIHGNKWSLIARLFPGRTDNAVKNHWHVIMARKQ 
Sbjct: 72  FNQLDPRIIRKPFSEEEEERLLGAHRIHGNKWSLIARLFPGRTDNAVKNHWHVIMARKQR 131

Query: 126 EQSKL--PKRTHQHFP--VTSSNFLGNQTESSSLDRRQF--------STTILVSD---NN 185
           EQSKL   KRT+Q F   + ++N +  Q+ SS+ +            +TTILVSD   NN
Sbjct: 132 EQSKLCGNKRTYQQFSNLILNNNQITTQSSSSTTNHHHHHHHHPQLTTTTILVSDYNNNN 191

Query: 186 RSHKDGMVWNFRQSLKGYSDHNNIPVLHR--------HYYPNYSSKYANFRTSPSSARFC 245
            + KDGMVWNFRQ  KGYSD+NNI  L+R        +YYPN SS      +S SSARFC
Sbjct: 192 SNSKDGMVWNFRQGFKGYSDNNNI--LYRSSSSHFNYNYYPNSSS------SSSSSARFC 251

Query: 246 FPTAKIPFGVFEFGSTSTTPLVKFMANTDNHHRHHHLHAQEQRQEQESLNNDKDTPFIDF 289
           FP  KIP GVFEFGS STT L+KFMANTD+ + +H    Q  +QE ESL +  + PFIDF
Sbjct: 252 FPNNKIPIGVFEFGSPSTTALMKFMANTDDRNNNHDQQPQVLQQE-ESLKDKDNIPFIDF 309

[Close]

BLAST of Cp4.1LG13g04250 vs. NCBI nr
Match: gi|590599994|ref|XP_007019337.1| (Myb domain protein 52 [Theobroma cacao])

HSP 1 Score: 247.3 bits (630), Expect = 3.3e-62
Identity = 156/336 (46.43%), Postives = 192/336 (57.14%), Query Frame = 1


Query: 3   MKDSGDLHVYDHEYKSSCPRGHWRPAEDQKLRRLVEQYGAQNWNSIAEKLQGRSGKSCRL 62
           M+DSG     D +   +CPRGHWRPAED+KLR+LVEQYGAQNWNSIAEKLQGRSGKSCRL
Sbjct: 1   MEDSGAASSDDVK---TCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRL 60

Query: 63  RWFNQLDPRIIRKPFSEEEEERLLAAHRIHGNKWSLIARLFPGRTDNAVKNHWHVIMARK 122
           RWFNQLDPRI R+PF+EEEEERLLAAHRIHGNKW+LIARLFPGRTDNAVKNHWHVIMARK
Sbjct: 61  RWFNQLDPRINRRPFTEEEEERLLAAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARK 120

Query: 123 QLEQSKL-PKRTHQ--------------------------HFPVTSSNFLGNQT------ 182
           Q EQSKL  KR+ Q                                S FL  Q       
Sbjct: 121 QREQSKLCGKRSFQDGLSDSKLSSTGFTPRKARCQEAFSSRIGFGDSRFLEFQNPSKERI 180

Query: 183 -----ESSSLDRRQFSTTILVSDNNRSHKDGMVWNFRQSLKG----YSDHNNIPVLHRHY 242
                 S+S     F+++ ++  NN S  +    + +  L G    Y    N  +L +  
Sbjct: 181 FSVSYSSTSSPSWTFASSTMMPSNNSSSAELSRRDGKDYLSGSGSSYYSMENSKILDQSL 240

Query: 243 YPNYSSKYANFRTSPSSARFCFPTAK----IPFGVFEFG----STSTTPLVKFMANTDNH 289
           Y  +S+  A   +  +S+ F  P  +     PFG  + G    S +     + M+  DN 
Sbjct: 241 YKYHSNASAYCSSLKNSSAFGLPNYRRVVPSPFGYLKLGDNYESNNGVMRKELMSVIDNA 300

[Close]

BLAST of Cp4.1LG13g04250 vs. NCBI nr
Match: gi|657963349|ref|XP_008373285.1| (PREDICTED: transcription factor MYB44-like [Malus domestica])

HSP 1 Score: 243.4 bits (620), Expect = 4.8e-61
Identity = 162/349 (46.42%), Postives = 191/349 (54.73%), Query Frame = 1


Query: 12  YDHEYKSS-CPRGHWRPAEDQKLRRLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDP 71
           Y  E KS+ CPRGHWRPAED+KLR+LVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDP
Sbjct: 4   YGDEAKSTGCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDP 63

Query: 72  RIIRKPFSEEEEERLLAAHRIHGNKWSLIARLFPGRTDNAVKNHWHVIMARKQLEQSKL- 131
           RI R+PFSEEEEERLLAAHRIHGNKW+LIARLFPGRTDNAVKNHWHVIMAR+Q EQSK+ 
Sbjct: 64  RINRRPFSEEEEERLLAAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARRQREQSKVC 123

Query: 132 PKRTHQ-----HFPVTSS---NF-----LGNQTESSSLDRRQFSTTILVSDNNRSHKDGM 191
            K++ Q     H P +SS   NF     L +Q  S    R   ST  L   N    +   
Sbjct: 124 GKKSFQDFFNDHSPNSSSISNNFDASRKLRSQGSSIGFGRNNISTKFLEFQNPNKDRAMF 183

Query: 192 V-----------WNFRQSLKGYSDHNNIPVL----------------------------- 251
           +           WNF       ++ +++ +L                             
Sbjct: 184 MDSRPTSSFPYNWNFASMSTTSNNSSSVDLLGRERRDYINNGSSNYTISELSKGSHPQLV 243

Query: 252 HRHYYPNYSSKYANFRTSPSSARFCFPTAKIPFGV------------FEFGSTSTTPLVK 289
           HR + P  S  Y  +R S S+A F  PT   PFG              + GST    L  
Sbjct: 244 HRRHNPTSSFLYGCYRGSSSNA-FGRPTYSSPFGCPSNHADRLINRQDQHGSTFKEVLPN 303

[Close]

BLAST of Cp4.1LG13g04250 vs. NCBI nr
Match: gi|702373957|ref|XP_010062174.1| (PREDICTED: myb-like protein Q [Eucalyptus grandis])

HSP 1 Score: 238.0 bits (606), Expect = 2.0e-59
Identity = 159/328 (48.48%), Postives = 189/328 (57.62%), Query Frame = 1


Query: 6   SGDLHVYDHEYKSSCPRGHWRPAEDQKLRRLVEQYGAQNWNSIAEKLQGRSGKSCRLRWF 65
           SGD    D +  ++CPRGHWRPAED+KLR+LVEQYGAQNWNSIAEKLQGRSGKSCRLRWF
Sbjct: 47  SGD----DGKSAAACPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWF 106

Query: 66  NQLDPRIIRKPFSEEEEERLLAAHRIHGNKWSLIARLFPGRTDNAVKNHWHVIMARKQLE 125
           NQLDPRI R+PF+EEEEERLLAAHR+HGNKW+LIARLFPGRTDNAVKNHWHVIMARKQ E
Sbjct: 107 NQLDPRINRRPFTEEEEERLLAAHRVHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRE 166

Query: 126 QSKL-PKRTHQHFPVTSSNFL-GNQTE-SSSLDRRQF------STTILVSDNNRSH---- 185
           QSKL  KR HQ + +     L G +T     L   QF         I  S     +    
Sbjct: 167 QSKLCGKRIHQEYSLGDPTGLQGRKTHFQDELLGSQFRFDQGKGFFIFQSPGKERNFALP 226

Query: 186 -KDGMVWNFRQSLKGYSDHNNIPV------LHRHYYPNYSSKYAN----------FRTSP 245
                 W F       S HN+  V        R YY   S+ Y+           F + P
Sbjct: 227 SSSSASWTFGSQSLAKSAHNSSSVDDLNRIERRDYYNRASNNYSGREGARSLSQPFHSHP 286

Query: 246 ----SSARFCFPTAKI---PFGVFEFG----STSTTPLVKFMANTDNHHR----HHHLHA 289
               SSA       ++   PFG    G     ++T    + ++  D   R      H+++
Sbjct: 287 YSSLSSAYSISQYQRVVPSPFGYVCLGDGCNDSNTMKKQEIVSFHDEMPRLEKTRLHVNS 346

The following BLAST results are available for this feature:

BLAST of Cp4.1LG13g04250 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MYB44_ARATH	1.9e-30	58.42	Transcription factor MYB44 OS=Arabidopsis thaliana GN=MYB44 PE=2 SV=1	[more]
MYB_XENLA	7.7e-27	42.86	Transcriptional activator Myb OS=Xenopus laevis GN=myb PE=2 SV=1	[more]
MYB_HUMAN	5.0e-26	42.06	Transcriptional activator Myb OS=Homo sapiens GN=MYB PE=1 SV=2	[more]
MYB_BOVIN	5.0e-26	42.06	Transcriptional activator Myb OS=Bos taurus GN=MYB PE=2 SV=1	[more]
MYB_CHICK	1.1e-25	42.28	Transcriptional activator Myb OS=Gallus gallus GN=MYB PE=1 SV=1	[more]

BLAST of Cp4.1LG13g04250 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGJ9_CUCSA	7.3e-101	67.43	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G344210 PE=4 SV=1	[more]
A0A061FIQ0_THECC	2.3e-62	46.43	Myb domain protein 52 OS=Theobroma cacao GN=TCM_035359 PE=4 SV=1	[more]
A0A059BTH1_EUCGR	1.4e-59	48.48	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02756 PE=4 SV=1	[more]
B9H7M6_POPTR	1.8e-59	45.71	Putative MYB transcription factor family protein OS=Populus trichocarpa GN=POPTR...	[more]
A0A072V0T7_MEDTR	3.1e-59	49.33	Myb transcription factor OS=Medicago truncatula GN=MTR_3g089045 PE=4 SV=1	[more]

BLAST of Cp4.1LG13g04250 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G17950.1	6.6e-53	64.94	myb domain protein 52	[more]
AT1G73410.1	5.6e-52	45.56	myb domain protein 54	[more]
AT1G69560.1	3.1e-50	71.32	myb domain protein 105	[more]
AT1G26780.2	2.9e-48	60.78	myb domain protein 117	[more]
AT4G33450.1	3.5e-46	41.01	myb domain protein 69	[more]

BLAST of Cp4.1LG13g04250 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659081894\|ref\|XP_008441565.1\|	4.3e-102	68.17	PREDICTED: transcriptional activator Myb-like isoform X1 [Cucumis melo]	[more]
gi\|778714940\|ref\|XP_004144300.2\|	1.0e-100	67.43	PREDICTED: transcription factor MYB57-like isoform X1 [Cucumis sativus]	[more]
gi\|590599994\|ref\|XP_007019337.1\|	3.3e-62	46.43	Myb domain protein 52 [Theobroma cacao]	[more]
gi\|657963349\|ref\|XP_008373285.1\|	4.8e-61	46.42	PREDICTED: transcription factor MYB44-like [Malus domestica]	[more]
gi\|702373957\|ref\|XP_010062174.1\|	2.0e-59	48.48	PREDICTED: myb-like protein Q [Eucalyptus grandis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR017930	Myb_dom
IPR009057	Homeobox-like_sf
IPR001005	SANT/Myb

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:2000652	regulation of secondary cell wall biogenesis
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG13g04250.1	Cp4.1LG13g04250.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 74..116 score: 7.0E-16coord: 22..67 score: 5.2
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 21..70 score: 1.6E-14coord: 73..121 score: 1.2
IPR009057	Homeodomain-like	GENE3D	G3DSA:1.10.10.60		coord: 76..122 score: 3.9E-21coord: 23..75 score: 1.0
IPR009057	Homeodomain-like	unknown	SSF46689	Homeodomain-like	coord: 20..115 score: 1.09
IPR017930	Myb domain	PROFILE	PS51294	HTH_MYB	coord: 17..68 score: 19.136coord: 69..123 score: 26
None	No IPR available	PANTHER	PTHR10641	MYB-LIKE DNA-BINDING PROTEIN MYB	coord: 208..249 score: 3.7E-89coord: 18..126 score: 3.7E-89coord: 277..287 score: 3.7
None	No IPR available	PANTHER	PTHR10641:SF496	SUBFAMILY NOT NAMED	coord: 277..287 score: 3.7E-89coord: 208..249 score: 3.7E-89coord: 18..126 score: 3.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG13g04250	Cucsa.077160	Cucumber (Gy14) v1	cgycpeB0127
Cp4.1LG13g04250	CmaCh09G010740	Cucurbita maxima (Rimu)	cmacpeB033
Cp4.1LG13g04250	CmaCh15G006330	Cucurbita maxima (Rimu)	cmacpeB305
Cp4.1LG13g04250	CmaCh04G024150	Cucurbita maxima (Rimu)	cmacpeB705
Cp4.1LG13g04250	CmoCh15G006410	Cucurbita moschata (Rifu)	cmocpeB268
Cp4.1LG13g04250	CmoCh09G010810	Cucurbita moschata (Rifu)	cmocpeB009
Cp4.1LG13g04250	CmoCh04G025320	Cucurbita moschata (Rifu)	cmocpeB657
Cp4.1LG13g04250	Cla013871	Watermelon (97103) v1	cpewmB170
Cp4.1LG13g04250	Csa6G344210	Cucumber (Chinese Long) v2	cpecuB200
Cp4.1LG13g04250	MELO3C008423	Melon (DHL92) v3.5.1	cpemeB168
Cp4.1LG13g04250	ClCG08G006350	Watermelon (Charleston Gray)	cpewcgB180
Cp4.1LG13g04250	CSPI06G18190	Wild cucumber (PI 183967)	cpecpiB201
Cp4.1LG13g04250	Lsi08G005130	Bottle gourd (USVL1VR-Ls)	cpelsiB158
Cp4.1LG13g04250	MELO3C008423.2	Melon (DHL92) v3.6.1	cpemedB200
Cp4.1LG13g04250	CsaV3_6G031070	Cucumber (Chinese Long) v3	cpecucB0240
Cp4.1LG13g04250	Bhi04G001431	Wax gourd	cpewgoB0252
Cp4.1LG13g04250	CsGy6G017650	Cucumber (Gy14) v2	cgybcpeB743
Cp4.1LG13g04250	Carg01573	Silver-seed gourd	carcpeB1157
Cp4.1LG13g04250	Carg15764	Silver-seed gourd	carcpeB0095

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG13g04250	Cp4.1LG01g20980	Cucurbita pepo (Zucchini)	cpecpeB199
Cp4.1LG13g04250	Cp4.1LG06g07790	Cucurbita pepo (Zucchini)	cpecpeB228

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG13g04250	Cucumber (Chinese Long) v3	cpecucB0237
Cp4.1LG13g04250	Cucumber (Gy14) v2	cgybcpeB740