CmoCh04G025320 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh04G025320
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
Description(MYB transcription factor) (Myb domain protein 52)
LocationCmo_Chr04 : 18604743 .. 18606095 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTAGCTAGGGTTCTAAGATCGTTGATGGTGATGATGATGAAGGACTCTGGCCTGGATCATCATGTTGATTATGAGTATAAGTCTTCTTGTTCACGAGGCCATTGGAGGCCTGCTGAAGATGAAAAGCTTCGTCAATTGGTTGACAAATATGGCGCCCAGAATTGGAACTCGATTGCTCAAAAACTTCAAGGAAGATCAGGTACTTAATTATCATCTCATGATCTCATGATCTCATATCTTTGATTTGTTTTTTTTTTTATTCTCAATTCAAGTTGCAAAAACTTTGGTGGGTTTCGGTTCTTTTCTCGAATCTTTCGACCGATCATGAATTCATTTGCGTTTGTAGTGATTGAAACGAACGATTGAAGTCATCTGATGTTTTAGAGTGAGAGAACGATCTATCAACTTTGAGATGATAATTAGTGTAACGTAAATGTTTTATTTTGAAAAGGGTTCAATTTTGAATTTGCTATCTCGATTTCATTTGTAAATCAATAAATTTTGATGGGGTTTTTGCGTGTTCGGTATTGATGTTAATTTAATATACTTTTTGTTTGGATTTTTGTTAGGAAAGAGCTGTAGATTGAGATGGTTTAATCAACTCGATCCTAGAATTATTAGAAAGCCGTTTAGTGAAGAAGAAGAGGAAAGGCTTTTGGCGGCTCATCAAATACATGGAAACAAATGGTCACTTATAGCTAGATTATTTCCGGGTCGAACTGATAACGCTGTGAAGAATCATTGGCATGTTATAATGGCTAGAAAACAAAGAGAACGATCCAAGCTTTGTGGGAGCAAGAGAACTTTCCAGGAATTTTCAGCTTTTAACTTTCCCGGGAACCAAACAGAATCTTTAGGTACTTACAACATCAACGACAACAACAATAGTTTCCTTGAACTCCAAAACTCCCACAAAGATGGAACGGTATGGAATTTCAGACACTACTTGAAAGGTTCAAACGATAATAACATTTCCATTCTCCATGATACTTATCATAAGTTTAGAACTCCCTCATCAGCTCGAGTTTGCTATCCAAATCATAAAATTCCCTTTGGGGTTTATGAGTTTGGTAGCAATAGTGAAGTGATCAAGAGAGAATTGGCATTTGTGAACTTCATCGCCAACACTGATCGTCATCGTCATTATCATCATCGTCTTCTTCATGATCAAGAACGACAAGAAGATGAATCTCTTACAGACAAGGATGTTCCTTTCATAGATTTCCTCGGAGTCGGAGTTTCTTCGTAGATCAAATATATTTCTTCTAACAAATTACTTATACATAATTTGATCTTCCTCTGTAAAAATTATTAAACGTAGTTGTATCTTTGGCAAATTTATTAAACCCTCCT

mRNA sequence

TTAGCTAGGGTTCTAAGATCGTTGATGGTGATGATGATGAAGGACTCTGGCCTGGATCATCATGTTGATTATGAGTATAAGTCTTCTTGTTCACGAGGCCATTGGAGGCCTGCTGAAGATGAAAAGCTTCGTCAATTGGTTGACAAATATGGCGCCCAGAATTGGAACTCGATTGCTCAAAAACTTCAAGGAAGATCAGGAAAGAGCTGTAGATTGAGATGGTTTAATCAACTCGATCCTAGAATTATTAGAAAGCCGTTTAGTGAAGAAGAAGAGGAAAGGCTTTTGGCGGCTCATCAAATACATGGAAACAAATGGTCACTTATAGCTAGATTATTTCCGGGTCGAACTGATAACGCTGTGAAGAATCATTGGCATGTTATAATGGCTAGAAAACAAAGAGAACGATCCAAGCTTTGTGGGAGCAAGAGAACTTTCCAGGAATTTTCAGCTTTTAACTTTCCCGGGAACCAAACAGAATCTTTAGGTACTTACAACATCAACGACAACAACAATAGTTTCCTTGAACTCCAAAACTCCCACAAAGATGGAACGGTATGGAATTTCAGACACTACTTGAAAGGTTCAAACGATAATAACATTTCCATTCTCCATGATACTTATCATAAGTTTAGAACTCCCTCATCAGCTCGAGTTTGCTATCCAAATCATAAAATTCCCTTTGGGGTTTATGAGTTTGGTAGCAATAGTGAAGTGATCAAGAGAGAATTGGCATTTGTGAACTTCATCGCCAACACTGATCGTCATCGTCATTATCATCATCGTCTTCTTCATGATCAAGAACGACAAGAAGATGAATCTCTTACAGACAAGGATGTTCCTTTCATAGATTTCCTCGGAGTCGGAGTTTCTTCGTAGATCAAATATATTTCTTCTAACAAATTACTTATACATAATTTGATCTTCCTCTGTAAAAATTATTAAACGTAGTTGTATCTTTGGCAAATTTATTAAACCCTCCT

Coding sequence (CDS)

ATGGTGATGATGATGAAGGACTCTGGCCTGGATCATCATGTTGATTATGAGTATAAGTCTTCTTGTTCACGAGGCCATTGGAGGCCTGCTGAAGATGAAAAGCTTCGTCAATTGGTTGACAAATATGGCGCCCAGAATTGGAACTCGATTGCTCAAAAACTTCAAGGAAGATCAGGAAAGAGCTGTAGATTGAGATGGTTTAATCAACTCGATCCTAGAATTATTAGAAAGCCGTTTAGTGAAGAAGAAGAGGAAAGGCTTTTGGCGGCTCATCAAATACATGGAAACAAATGGTCACTTATAGCTAGATTATTTCCGGGTCGAACTGATAACGCTGTGAAGAATCATTGGCATGTTATAATGGCTAGAAAACAAAGAGAACGATCCAAGCTTTGTGGGAGCAAGAGAACTTTCCAGGAATTTTCAGCTTTTAACTTTCCCGGGAACCAAACAGAATCTTTAGGTACTTACAACATCAACGACAACAACAATAGTTTCCTTGAACTCCAAAACTCCCACAAAGATGGAACGGTATGGAATTTCAGACACTACTTGAAAGGTTCAAACGATAATAACATTTCCATTCTCCATGATACTTATCATAAGTTTAGAACTCCCTCATCAGCTCGAGTTTGCTATCCAAATCATAAAATTCCCTTTGGGGTTTATGAGTTTGGTAGCAATAGTGAAGTGATCAAGAGAGAATTGGCATTTGTGAACTTCATCGCCAACACTGATCGTCATCGTCATTATCATCATCGTCTTCTTCATGATCAAGAACGACAAGAAGATGAATCTCTTACAGACAAGGATGTTCCTTTCATAGATTTCCTCGGAGTCGGAGTTTCTTCGTAG
Homology
[Close]
BLAST of CmoCh04G025320 vs. Swiss-Prot
Match: MYB44_ARATH (Transcription factor MYB44 OS=Arabidopsis thaliana GN=MYB44 PE=2 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 8.6e-31
Identity = 60/101 (59.41%), Postives = 75/101 (74.26%), Query Frame = 1 

Query: 24  RGHWRPAEDEKLRQLVDKYGAQNWNSIAQKLQGRSGKSCRLRWFNQLDPRIIRKPFSEEE 83
           +G W P EDE+LR+LV KYG +NW  I++ + GRSGKSCRLRW NQL P++  +PFS EE
Sbjct: 6   KGPWSPEEDEQLRRLVVKYGPRNWTVISKSIPGRSGKSCRLRWCNQLSPQVEHRPFSAEE 65

Query: 84  EERLLAAHQIHGNKWSLIARLFPGRTDNAVKNHWHVIMARK 125
           +E +  AH   GNKW+ IARL  GRTDNAVKNHW+  + RK
Sbjct: 66  DETIARAHAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRK 106

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BLAST of CmoCh04G025320 vs. Swiss-Prot
Match: MYB_XENLA (Transcriptional activator Myb OS=Xenopus laevis GN=myb PE=2 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 4.0e-28
Identity = 56/124 (45.16%), Postives = 81/124 (65.32%), Query Frame = 1 

Query: 24  RGHWRPAEDEKLRQLVDKYGAQNWNSIAQKLQGRSGKSCRLRWFNQLDPRIIRKPFSEEE 83
           +G W   ED+++ +LV KYG + W+ IA+ L+GR GK CR RW N L+P + +  ++EEE
Sbjct: 89  KGPWTKEEDQRVIELVHKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKSSWTEEE 148

Query: 84  EERLLAAHQIHGNKWSLIARLFPGRTDNAVKNHWHVIMARKQRERSKLCGSKRTFQEFSA 143
           +  +  AH+  GN+W+ IA+L PGRTDNA+KNHW+  M RK+ +   L  S +T Q    
Sbjct: 149 DRTIYEAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKEEQEGYLQNSSKTNQHTIV 208

Query: 144 FNFP 148
            NFP
Sbjct: 209 TNFP 212

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BLAST of CmoCh04G025320 vs. Swiss-Prot
Match: MYBB_XENLA (Myb-related protein B OS=Xenopus laevis GN=mybl2 PE=2 SV=2)

HSP 1 Score: 120.6 bits (301), Expect = 2.9e-26
Identity = 51/101 (50.50%), Postives = 73/101 (72.28%), Query Frame = 1 

Query: 24  RGHWRPAEDEKLRQLVDKYGAQNWNSIAQKLQGRSGKSCRLRWFNQLDPRIIRKPFSEEE 83
           +G W   EDEK+ +LV KYG ++W  IA++L+GR GK CR RW N L+P + +  ++EEE
Sbjct: 83  KGPWTKEEDEKVIELVKKYGTKHWTLIAKQLRGRMGKQCRERWHNHLNPEVKKSSWTEEE 142

Query: 84  EERLLAAHQIHGNKWSLIARLFPGRTDNAVKNHWHVIMARK 125
           +  +  AH++ GN+W+ IA+L PGRTDNAVKNHW+  + RK
Sbjct: 143 DRIICQAHKVLGNRWAEIAKLLPGRTDNAVKNHWNSTIKRK 183

[Close]
BLAST of CmoCh04G025320 vs. Swiss-Prot
Match: MYB_HUMAN (Transcriptional activator Myb OS=Homo sapiens GN=MYB PE=1 SV=2)

HSP 1 Score: 119.8 bits (299), Expect = 4.9e-26
Identity = 55/126 (43.65%), Postives = 80/126 (63.49%), Query Frame = 1 

Query: 24  RGHWRPAEDEKLRQLVDKYGAQNWNSIAQKLQGRSGKSCRLRWFNQLDPRIIRKPFSEEE 83
           +G W   ED+++ +LV KYG + W+ IA+ L+GR GK CR RW N L+P + +  ++EEE
Sbjct: 92  KGPWTKEEDQRVIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEE 151

Query: 84  EERLLAAHQIHGNKWSLIARLFPGRTDNAVKNHWHVIMARKQRERSKLCGSKRTFQEFSA 143
           +  +  AH+  GN+W+ IA+L PGRTDNA+KNHW+  M RK  +   L  S +  Q   A
Sbjct: 152 DRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVEQEGYLQESSKASQPAVA 211

Query: 144 FNFPGN 150
            +F  N
Sbjct: 212 TSFQKN 217

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BLAST of CmoCh04G025320 vs. Swiss-Prot
Match: MYB_BOVIN (Transcriptional activator Myb OS=Bos taurus GN=MYB PE=2 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.4e-25
Identity = 54/126 (42.86%), Postives = 79/126 (62.70%), Query Frame = 1 

Query: 24  RGHWRPAEDEKLRQLVDKYGAQNWNSIAQKLQGRSGKSCRLRWFNQLDPRIIRKPFSEEE 83
           +G W   ED+++ +LV KYG + W+ IA+ L+GR GK CR RW N L+P + +  ++EEE
Sbjct: 92  KGPWTKEEDQRVIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEE 151

Query: 84  EERLLAAHQIHGNKWSLIARLFPGRTDNAVKNHWHVIMARKQRERSKLCGSKRTFQEFSA 143
           +  +  AH+  GN+W+ IA+L PGRTDNA+KNHW+  M RK  +   L  S +  Q    
Sbjct: 152 DRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVEQEGYLQESSKASQPAVT 211

Query: 144 FNFPGN 150
            +F  N
Sbjct: 212 TSFQKN 217

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BLAST of CmoCh04G025320 vs. TrEMBL
Match: A0A0A0KGJ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G344210 PE=4 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 7.5e-90
Identity = 189/316 (59.81%), Postives = 220/316 (69.62%), Query Frame = 1 

Query: 5   MKDSGLDH-------HVDY--EYKSSCSRGHWRPAEDEKLRQLVDKYGAQNWNSIAQKLQ 64
           MKDS  DH       HV+Y  +YKSSC RGHWRPAEDEKLRQLV++YGAQNWNSIA+KLQ
Sbjct: 1   MKDSSGDHNNYNNNLHVNYHDQYKSSCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQ 60

Query: 65  GRSGKSCRLRWFNQLDPRIIRKPFSEEEEERLLAAHQIHGNKWSLIARLFPGRTDNAVKN 124
           GRSGKSCRLRWFNQLDPRIIRKPFSEEEEERLL AH+IHGNKWSLIARLFPGRTDNAVKN
Sbjct: 61  GRSGKSCRLRWFNQLDPRIIRKPFSEEEEERLLGAHRIHGNKWSLIARLFPGRTDNAVKN 120

Query: 125 HWHVIMARKQRERSKLCGSKRTFQEFSAFNFPGNQ---TESLGTYNINDNNNSFLELQN- 184
           HWHVIMARKQRE+SKLCG+KRT+Q+FS      NQ     S  T N + +++   +L   
Sbjct: 121 HWHVIMARKQREQSKLCGNKRTYQQFSNLILNNNQITTQSSSSTTNHHHHHHHHPQLTTT 180

Query: 185 ------------SHKDGTVWNFRHYLKGSNDNN-----ISILHDTYHKF-----RTPSSA 244
                       + KDG VWNFR   KG +DNN      S  H  Y+ +      + SSA
Sbjct: 181 TILVSDYNNNNSNSKDGMVWNFRQGFKGYSDNNNILYRSSSSHFNYNYYPNSSSSSSSSA 240

Query: 245 RVCYPNHKIPFGVYEFGSNSEVIKRELAFVNFIANTDRHRHYHHRLLHDQERQEDESLTD 285
           R C+PN+KIP GV+EFGS S       A + F+ANTD   + H +    Q  Q++ESL D
Sbjct: 241 RFCFPNNKIPIGVFEFGSPSTT-----ALMKFMANTDDRNNNHDQ--QPQVLQQEESLKD 300

[Close]
BLAST of CmoCh04G025320 vs. TrEMBL
Match: E0CQL8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g15260 PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 9.8e-66
Identity = 153/318 (48.11%), Postives = 194/318 (61.01%), Query Frame = 1 

Query: 21  SCSRGHWRPAEDEKLRQLVDKYGAQNWNSIAQKLQGRSGKSCRLRWFNQLDPRIIRKPFS 80
           +C RGHWRPAEDEKLRQLV++YGAQNWNSIA+KLQGRSGKSCRLRWFNQLDPRI RKPF+
Sbjct: 10  TCPRGHWRPAEDEKLRQLVEEYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRKPFT 69

Query: 81  EEEEERLLAAHQIHGNKWSLIARLFPGRTDNAVKNHWHVIMARKQRERSKLCGSKRTFQE 140
           EEEEERLLAAH+IHGNKW+LI+RLFPGRTDNAVKNHWHVIMARKQRE+SKLCG KR++++
Sbjct: 70  EEEEERLLAAHRIHGNKWALISRLFPGRTDNAVKNHWHVIMARKQREQSKLCG-KRSYKD 129

Query: 141 F------SAFNFPGNQTESLGTYNINDNNNSFL-ELQNSHKDGTV----------WNFRH 200
                  S+  F G+ + S    + N   NS L E  N +K+G            W F  
Sbjct: 130 VLSDSNTSSNGFRGSNSRSQQYSSANRLENSRLFEFLNPNKEGIFSISPSSSSPSWTFAR 189

Query: 201 YLKGSNDNNIS---ILHDTYHKFRTPSSARVCYPNHKIPFGVYEFGSNSE---------- 260
            +  + +N+ S   +       F + SS  +    + +   +Y + SNS           
Sbjct: 190 SISKATNNSSSTDLLRRGGRDHFNSCSSDGIMDSQNSLDRSLYRYFSNSSAYGGYRTSTA 249

Query: 261 ------------------------VIKRELAFVNFIANTDRHRHYHHRLLHDQERQEDES 285
                                   ++KRE  FVNF    D    +   ++ +Q+ QEDES
Sbjct: 250 FGFPNYKRVVSGPVGYSKLGDPHGMLKRE--FVNF---GDNSPTFAKMIMTNQQEQEDES 309

[Close]
BLAST of CmoCh04G025320 vs. TrEMBL
Match: K4BT45_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 8.3e-65
Identity = 139/299 (46.49%), Postives = 189/299 (63.21%), Query Frame = 1 

Query: 19  KSSCSRGHWRPAEDEKLRQLVDKYGAQNWNSIAQKLQGRSGKSCRLRWFNQLDPRIIRKP 78
           +SSC RGHWRPAEDEKLRQLV++YG QNWNSIA+KLQGRSGKSCRLRWFNQLDPRI R+P
Sbjct: 13  RSSCPRGHWRPAEDEKLRQLVEQYGPQNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRP 72

Query: 79  FSEEEEERLLAAHQIHGNKWSLIARLFPGRTDNAVKNHWHVIMARKQRERSKLCGSKRTF 138
           FSE+EEE+L+ AH+IHGNKW+LI+RLFPGRTDNAVKNHWHV+MARKQRE+SK+CG +  +
Sbjct: 73  FSEDEEEKLIGAHRIHGNKWALISRLFPGRTDNAVKNHWHVLMARKQREQSKICGKRSLY 132

Query: 139 QEFSAFNFPGNQTESLGTY--NINDNNNSFLELQNSHKDGTVWNFRHYLKGSNDNNISIL 198
           Q+    +F  +   S   +    N+NNN+ + +Q  +  G+  NF  + +  N + +  +
Sbjct: 133 QQQQHDSFLSDSKSSCYGFRRRNNNNNNNNMRIQEGNY-GSKINFFEF-QNPNKDRVFSM 192

Query: 199 HDTY-------------HKFRTPSSARVCYPNHKIPFGVYEFGSNSEVIKRELAFVNFIA 258
             TY             H FR  S  +     + + F  +  G ++   KR   F N  +
Sbjct: 193 STTYSSSSPEFCGRIGSHLFRESSIDQKSLRQNNLSFSSHGRGGDNNNCKRSTTFQNPFS 252

Query: 259 NTDRHRH--YHHRLLH----------------DQERQEDESLTDKDVPFIDFLGVGVSS 285
             DR+ +     R+++                +Q++  +E+   KD+PFIDFLGVG+SS
Sbjct: 253 YVDRNEYDSITERVVNVSNSTFSFGKILKENIEQQKYGEEAREKKDIPFIDFLGVGISS 309

[Close]
BLAST of CmoCh04G025320 vs. TrEMBL
Match: A0A067H7L1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g020106mg PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 1.1e-64
Identity = 161/336 (47.92%), Postives = 198/336 (58.93%), Query Frame = 1 

Query: 5   MKDSGLDHHVDYEYKSS--CSRGHWRPAEDEKLRQLVDKYGAQNWNSIAQKLQGRSGKSC 64
           M+DSG     D    S+  C RGHWRPAEDEKLRQLV++YGAQNWNSIA+KLQGRSGKSC
Sbjct: 1   MEDSGAGSSDDATKSSTSTCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSC 60

Query: 65  RLRWFNQLDPRIIRKPFSEEEEERLLAAHQIHGNKWSLIARLFPGRTDNAVKNHWHVIMA 124
           RLRWFNQLDPRI R+PF+E+EEERLLAAH+IHGNKW+LIARLFPGRTDNAVKNHWHVIMA
Sbjct: 61  RLRWFNQLDPRINRRPFTEDEEERLLAAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMA 120

Query: 125 RKQRERSKLCGSKRTFQE----FSAFNF-----PGNQTESLGTYNINDNNNSFLELQNSH 184
           RKQRE+SKLCG KR+ Q+     S  NF       +Q   L +    D N+   E +N +
Sbjct: 121 RKQREQSKLCG-KRSHQDTGNIISDQNFIHARRSRSQDAMLSSKFGFDQNSRIFEFRNPN 180

Query: 185 KDGT-----------VWNFRHYLKGSNDNNISI---------LHDTYHKFRTPSSARVCY 244
            D T            W F      ++ NN S+           +T  K       R CY
Sbjct: 181 HDRTFAVSPPPSSSLTWAFGAAPIVTSSNNSSVDLSRREAGDFFNTSTKVSDQHPYRSCY 240

Query: 245 PNHKI---------------------PFGVYEFGSNSE---VIKRELAFVNFIANTDRHR 285
           PN                        PFG  + G + E   VIK+E+  + F  N+  H 
Sbjct: 241 PNSSAYGSYRGSSSFGVTNYRRFVPSPFGYVKVGDDYESHGVIKKEV--IKFSDNSPSHL 300

[Close]
BLAST of CmoCh04G025320 vs. TrEMBL
Match: V4TD41_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001803mg PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 1.1e-64
Identity = 161/336 (47.92%), Postives = 198/336 (58.93%), Query Frame = 1 

Query: 5   MKDSGLDHHVDYEYKSS--CSRGHWRPAEDEKLRQLVDKYGAQNWNSIAQKLQGRSGKSC 64
           M+DSG     D    S+  C RGHWRPAEDEKLRQLV++YGAQNWNSIA+KLQGRSGKSC
Sbjct: 1   MEDSGAGSSDDATKSSTSTCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSC 60

Query: 65  RLRWFNQLDPRIIRKPFSEEEEERLLAAHQIHGNKWSLIARLFPGRTDNAVKNHWHVIMA 124
           RLRWFNQLDPRI R+PF+E+EEERLLAAH+IHGNKW+LIARLFPGRTDNAVKNHWHVIMA
Sbjct: 61  RLRWFNQLDPRINRRPFTEDEEERLLAAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMA 120

Query: 125 RKQRERSKLCGSKRTFQE----FSAFNF-----PGNQTESLGTYNINDNNNSFLELQNSH 184
           RKQRE+SKLCG KR+ Q+     S  NF       +Q   L +    D N+   E +N +
Sbjct: 121 RKQREQSKLCG-KRSHQDTGNIISDQNFIHARRSRSQDAMLSSKFGFDQNSRIFEFRNPN 180

Query: 185 KDGT-----------VWNFRHYLKGSNDNNISI---------LHDTYHKFRTPSSARVCY 244
            D T            W F      ++ NN S+           +T  K       R CY
Sbjct: 181 HDRTFAVSPPPSSSLTWAFGAAPIVTSSNNSSVDLSRREAGDFFNTSTKVSDQHPYRSCY 240

Query: 245 PNHKI---------------------PFGVYEFGSNSE---VIKRELAFVNFIANTDRHR 285
           PN                        PFG  + G + E   VIK+E+  + F  N+  H 
Sbjct: 241 PNSSAYGSYRGSSSFGVTNYRRFVPSPFGYVKVGDDYESHGVIKKEV--IKFSDNSPSHL 300

[Close]
BLAST of CmoCh04G025320 vs. TAIR10
Match: AT1G17950.1 (AT1G17950.1 myb domain protein 52)

HSP 1 Score: 206.5 bits (524), Expect = 2.2e-53
Identity = 92/110 (83.64%), Postives = 103/110 (93.64%), Query Frame = 1 

Query: 22  CSRGHWRPAEDEKLRQLVDKYGAQNWNSIAQKLQGRSGKSCRLRWFNQLDPRIIRKPFSE 81
           CSRGHWRPAEDEKLR+LV+++G  NWN+IAQKL GRSGKSCRLRWFNQLDPRI R PF+E
Sbjct: 3   CSRGHWRPAEDEKLRELVEQFGPHNWNAIAQKLSGRSGKSCRLRWFNQLDPRINRNPFTE 62

Query: 82  EEEERLLAAHQIHGNKWSLIARLFPGRTDNAVKNHWHVIMARKQRERSKL 132
           EEEERLLA+H+IHGN+WS+IAR FPGRTDNAVKNHWHVIMAR+ RERSKL
Sbjct: 63  EEEERLLASHRIHGNRWSVIARFFPGRTDNAVKNHWHVIMARRGRERSKL 112

[Close]
BLAST of CmoCh04G025320 vs. TAIR10
Match: AT1G73410.1 (AT1G73410.1 myb domain protein 54)

HSP 1 Score: 198.4 bits (503), Expect = 6.1e-51
Identity = 119/267 (44.57%), Postives = 155/267 (58.05%), Query Frame = 1 

Query: 22  CSRGHWRPAEDEKLRQLVDKYGAQNWNSIAQKLQGRSGKSCRLRWFNQLDPRIIRKPFSE 81
           CSRGHWRPAEDEKL+ LV++YG  NWN+IA KL GRSGKSCRLRWFNQLDPRI R PF+E
Sbjct: 4   CSRGHWRPAEDEKLKDLVEQYGPHNWNAIALKLPGRSGKSCRLRWFNQLDPRINRNPFTE 63

Query: 82  EEEERLLAAHQIHGNKWSLIARLFPGRTDNAVKNHWHVIMARKQRERSK--LCGSKRTFQ 141
           EEEERLLAAH+IHGN+WS+IARLFPGRTDNAVKNHWHVIMAR+ R+ SK  L  S  +  
Sbjct: 64  EEEERLLAAHRIHGNRWSIIARLFPGRTDNAVKNHWHVIMARRTRQTSKPRLLPSTTSSS 123

Query: 142 EFSAFNFPGNQTESLGTYNINDNNNSFLELQNSHKDGTVWNFRHYLKGSNDNNISILHDT 201
              A         S G YN N +++   ++  +      + F H       N++  L + 
Sbjct: 124 SLMASE---QIMMSSGGYNHNYSSDDRKKIFPADFINFPYKFSHI------NHLHFLKEF 183

Query: 202 YHKFRTPSSARVCYPNHKIPFGVYEFGSNSEVIKRELAFVNF--IANTDRHRHYHHRLLH 261
           +       + ++   NHK           +   K+ + F NF  +           +   
Sbjct: 184 F-------TGKIAL-NHK-----------ANQSKKPMEFYNFLQVNTDSNKSEIIDQDSG 242

Query: 262 DQERQEDESLTDKDVPFIDFLGVGVSS 285
             +R + ++  +  VPF DFL VG S+
Sbjct: 244 QSKRSDSDTKHESHVPFFDFLSVGNSA 242

[Close]
BLAST of CmoCh04G025320 vs. TAIR10
Match: AT1G69560.1 (AT1G69560.1 myb domain protein 105)

HSP 1 Score: 195.7 bits (496), Expect = 4.0e-50
Identity = 90/132 (68.18%), Postives = 109/132 (82.58%), Query Frame = 1 

Query: 6   KDSGLDHHVDYEYKSSCSRGHWRPAEDEKLRQLVDKYGAQNWNSIAQKLQGRSGKSCRLR 65
           KD+ +     +  K+S SRGHWRPAED KL++LV  YG QNWN IA+KLQGRSGKSCRLR
Sbjct: 89  KDTTVYRSCGHSSKASVSRGHWRPAEDTKLKELVAVYGPQNWNLIAEKLQGRSGKSCRLR 148

Query: 66  WFNQLDPRIIRKPFSEEEEERLLAAHQIHGNKWSLIARLFPGRTDNAVKNHWHVIMARKQ 125
           WFNQLDPRI R+ F+EEEEERL+ AH+++GNKW++IARLFPGRTDN+VKNHWHVIMARK 
Sbjct: 149 WFNQLDPRINRRAFTEEEEERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVIMARKF 208

Query: 126 RERSKLCGSKRT 138
           RE+S     ++T
Sbjct: 209 REQSSSYRRRKT 220

[Close]
BLAST of CmoCh04G025320 vs. TAIR10
Match: AT1G26780.2 (AT1G26780.2 myb domain protein 117)

HSP 1 Score: 189.5 bits (480), Expect = 2.8e-48
Identity = 124/294 (42.18%), Postives = 159/294 (54.08%), Query Frame = 1 

Query: 7   DSGLDHHVDYEYKSSCSRGHWRPAEDEKLRQLVDKYGAQNWNSIAQKLQGRSGKSCRLRW 66
           DSG          S   RGHWRPAED KL++LV  YG QNWN IA+KLQGRSGKSCRLRW
Sbjct: 81  DSGQSWSSSSSKPSVLGRGHWRPAEDVKLKELVSIYGPQNWNLIAEKLQGRSGKSCRLRW 140

Query: 67  FNQLDPRIIRKPFSEEEEERLLAAHQIHGNKWSLIARLFPGRTDNAVKNHWHVIMARKQR 126
           FNQLDPRI R+ F+EEEEERL+ AH+++GNKW++IARLFPGRTDN+VKNHWHV+MARK R
Sbjct: 141 FNQLDPRINRRAFTEEEEERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVVMARKYR 200

Query: 127 ERSKLCGSKRTFQEFSAFNFPGNQTESLGTYNINDNNNSFLELQNSH-KDGTVWNFRHYL 186
           E S     ++            N        N N N +SF+   +   +    +N  H+L
Sbjct: 201 EHSSAYRRRKLMSNNPLKPHLTNNHHP----NPNPNYHSFISTNHYFAQPFPEFNLTHHL 260

Query: 187 KGSNDNNISILHDTYHKFRTPSSARVCYPNHKIPFGVYEFGSNSEVIKRELAFVNFIANT 246
                NN  I  D +++   P      Y N++ P  V  FG+   V        N  A +
Sbjct: 261 V----NNAPITSD-HNQLVLPFHCFQGYENNEPPMVVSMFGNQMMVGD------NVGATS 320

Query: 247 DRHRHYHHRLLHDQERQE-------------DESLTDK---DVPFIDFLGVGVS 284
           D   +  H    +QE+ E             DE + +K      F DFLG+G +
Sbjct: 321 DALCNIPHIDPSNQEKPEPNDAMHWIGMDAVDEEVFEKAKQQPHFFDFLGLGTA 359

[Close]
BLAST of CmoCh04G025320 vs. TAIR10
Match: AT4G33450.1 (AT4G33450.1 myb domain protein 69)

HSP 1 Score: 186.4 bits (472), Expect = 2.4e-47
Identity = 104/239 (43.51%), Postives = 137/239 (57.32%), Query Frame = 1 

Query: 19  KSSCSRGHWRPAEDEKLRQLVDKYGAQNWNSIAQKLQGRSGKSCRLRWFNQLDPRIIRKP 78
           K SC RGHWRP ED+ LRQLV++YG +NWN IAQ L GRSGKSCRLRW+NQLDP I +KP
Sbjct: 14  KPSCQRGHWRPVEDDNLRQLVEQYGPKNWNFIAQHLYGRSGKSCRLRWYNQLDPNITKKP 73

Query: 79  FSEEEEERLLAAHQIHGNKWSLIARLFPGRTDNAVKNHWHVIMARKQRERSKLCGSKRTF 138
           F+EEEEERLL AH+I GN+W+ IARLFPGRTDNAVKNH+HVIMAR++RE      +    
Sbjct: 74  FTEEEEERLLKAHRIQGNRWASIARLFPGRTDNAVKNHFHVIMARRKRENFSSTATSTFN 133

Query: 139 QEFSAFNFPGNQTESLGTYNINDNNNSFLELQNSHKDGT--VWNFRHYLKGSN----DNN 198
           Q +     P +    L        N S   L    KD +  +W +      +N     ++
Sbjct: 134 QTWHTVLSPSSSLTRL--------NRSHFGLWRYRKDKSCGLWPYSFVSPPTNGQFGSSS 193

Query: 199 ISILHDTYHKFRTPSSARV---------CYPNHKIPFGVYEFGSNSEVIKRELAFVNFI 243
           +S +H   +  R  S   V           P+HK+           +  K ++ F++F+
Sbjct: 194 VSNVHHEIYLERRKSKELVDPQNYTFHAATPDHKMTSNEDGPSMGDDGEKNDVTFIDFL 244

[Close]
BLAST of CmoCh04G025320 vs. NCBI nr
Match: gi|778714940|ref|XP_004144300.2| (PREDICTED: transcription factor MYB57-like isoform X1 [Cucumis sativus])

HSP 1 Score: 338.6 bits (867), Expect = 1.1e-89
Identity = 189/316 (59.81%), Postives = 220/316 (69.62%), Query Frame = 1 

Query: 5   MKDSGLDH-------HVDY--EYKSSCSRGHWRPAEDEKLRQLVDKYGAQNWNSIAQKLQ 64
           MKDS  DH       HV+Y  +YKSSC RGHWRPAEDEKLRQLV++YGAQNWNSIA+KLQ
Sbjct: 1   MKDSSGDHNNYNNNLHVNYHDQYKSSCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQ 60

Query: 65  GRSGKSCRLRWFNQLDPRIIRKPFSEEEEERLLAAHQIHGNKWSLIARLFPGRTDNAVKN 124
           GRSGKSCRLRWFNQLDPRIIRKPFSEEEEERLL AH+IHGNKWSLIARLFPGRTDNAVKN
Sbjct: 61  GRSGKSCRLRWFNQLDPRIIRKPFSEEEEERLLGAHRIHGNKWSLIARLFPGRTDNAVKN 120

Query: 125 HWHVIMARKQRERSKLCGSKRTFQEFSAFNFPGNQ---TESLGTYNINDNNNSFLELQN- 184
           HWHVIMARKQRE+SKLCG+KRT+Q+FS      NQ     S  T N + +++   +L   
Sbjct: 121 HWHVIMARKQREQSKLCGNKRTYQQFSNLILNNNQITTQSSSSTTNHHHHHHHHPQLTTT 180

Query: 185 ------------SHKDGTVWNFRHYLKGSNDNN-----ISILHDTYHKF-----RTPSSA 244
                       + KDG VWNFR   KG +DNN      S  H  Y+ +      + SSA
Sbjct: 181 TILVSDYNNNNSNSKDGMVWNFRQGFKGYSDNNNILYRSSSSHFNYNYYPNSSSSSSSSA 240

Query: 245 RVCYPNHKIPFGVYEFGSNSEVIKRELAFVNFIANTDRHRHYHHRLLHDQERQEDESLTD 285
           R C+PN+KIP GV+EFGS S       A + F+ANTD   + H +    Q  Q++ESL D
Sbjct: 241 RFCFPNNKIPIGVFEFGSPSTT-----ALMKFMANTDDRNNNHDQ--QPQVLQQEESLKD 300

[Close]
BLAST of CmoCh04G025320 vs. NCBI nr
Match: gi|659081894|ref|XP_008441565.1| (PREDICTED: transcriptional activator Myb-like isoform X1 [Cucumis melo])

HSP 1 Score: 336.7 bits (862), Expect = 4.1e-89
Identity = 189/328 (57.62%), Postives = 218/328 (66.46%), Query Frame = 1 

Query: 5   MKDSGLDH-------HVDY--EYKSSCSRGHWRPAEDEKLRQLVDKYGAQNWNSIAQKLQ 64
           MKDS  DH       HV Y  +YK+SC RGHWRPAEDEKLRQLV++YGAQNWNSIA+KLQ
Sbjct: 1   MKDSSGDHNNYNNNLHVGYHDQYKASCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQ 60

Query: 65  GRSGKSCRLRWFNQLDPRIIRKPFSEEEEERLLAAHQIHGNKWSLIARLFPGRTDNAVKN 124
           GRSGKSCRLRWFNQLDPRIIRKPFSEEEEERLL AH+IHGNKWSLIARLFPGRTDNAVKN
Sbjct: 61  GRSGKSCRLRWFNQLDPRIIRKPFSEEEEERLLGAHRIHGNKWSLIARLFPGRTDNAVKN 120

Query: 125 HWHVIMARKQRERSKLCGSKRTFQEFSAFNFPGNQTESLGT------------------- 184
           HWHVIMARKQRE+SKLCG+KRT+Q+FS      N  +   T                   
Sbjct: 121 HWHVIMARKQREQSKLCGNKRTYQQFSNLILNNNNNQITTTQSSSSTTNHHHLHHHHHPQ 180

Query: 185 ---------YNINDNNNSFLELQNSHKDGTVWNFRHYLKGSNDNN-----ISILHDTYHK 244
                    YN N+N+NS        KDG VWNFR   KG +DNN      S  H  Y+ 
Sbjct: 181 FTTTILVSDYNNNNNSNS--------KDGMVWNFRQGFKGYSDNNNILYRSSSSHYNYNY 240

Query: 245 F-----RTPSSARVCYPNHKIPFGVYEFGSNSEVIKRELAFVNFIANTDRHRHYHHRLLH 285
           +      + SSAR C+PN KIPFGV+EFGS+S         + F+ANTD   + H +   
Sbjct: 241 YPNSSSSSSSSARFCFPNSKIPFGVFEFGSSSTT-----TLMKFMANTDDRNNNHDQ--Q 300

[Close]
BLAST of CmoCh04G025320 vs. NCBI nr
Match: gi|359492779|ref|XP_002278632.2| (PREDICTED: trichome differentiation protein GL1 [Vitis vinifera])

HSP 1 Score: 258.5 bits (659), Expect = 1.4e-65
Identity = 153/318 (48.11%), Postives = 194/318 (61.01%), Query Frame = 1 

Query: 21  SCSRGHWRPAEDEKLRQLVDKYGAQNWNSIAQKLQGRSGKSCRLRWFNQLDPRIIRKPFS 80
           +C RGHWRPAEDEKLRQLV++YGAQNWNSIA+KLQGRSGKSCRLRWFNQLDPRI RKPF+
Sbjct: 10  TCPRGHWRPAEDEKLRQLVEEYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRKPFT 69

Query: 81  EEEEERLLAAHQIHGNKWSLIARLFPGRTDNAVKNHWHVIMARKQRERSKLCGSKRTFQE 140
           EEEEERLLAAH+IHGNKW+LI+RLFPGRTDNAVKNHWHVIMARKQRE+SKLCG KR++++
Sbjct: 70  EEEEERLLAAHRIHGNKWALISRLFPGRTDNAVKNHWHVIMARKQREQSKLCG-KRSYKD 129

Query: 141 F------SAFNFPGNQTESLGTYNINDNNNSFL-ELQNSHKDGTV----------WNFRH 200
                  S+  F G+ + S    + N   NS L E  N +K+G            W F  
Sbjct: 130 VLSDSNTSSNGFRGSNSRSQQYSSANRLENSRLFEFLNPNKEGIFSISPSSSSPSWTFAR 189

Query: 201 YLKGSNDNNIS---ILHDTYHKFRTPSSARVCYPNHKIPFGVYEFGSNSE---------- 260
            +  + +N+ S   +       F + SS  +    + +   +Y + SNS           
Sbjct: 190 SISKATNNSSSTDLLRRGGRDHFNSCSSDGIMDSQNSLDRSLYRYFSNSSAYGGYRTSTA 249

Query: 261 ------------------------VIKRELAFVNFIANTDRHRHYHHRLLHDQERQEDES 285
                                   ++KRE  FVNF    D    +   ++ +Q+ QEDES
Sbjct: 250 FGFPNYKRVVSGPVGYSKLGDPHGMLKRE--FVNF---GDNSPTFAKMIMTNQQEQEDES 309

[Close]
BLAST of CmoCh04G025320 vs. NCBI nr
Match: gi|970023577|ref|XP_015073122.1| (PREDICTED: transcription factor MYB59-like [Solanum pennellii])

HSP 1 Score: 258.1 bits (658), Expect = 1.8e-65
Identity = 143/302 (47.35%), Postives = 190/302 (62.91%), Query Frame = 1 

Query: 19  KSSCSRGHWRPAEDEKLRQLVDKYGAQNWNSIAQKLQGRSGKSCRLRWFNQLDPRIIRKP 78
           +SSC RGHWRPAEDEKLRQLV++YG QNWNSIA+KLQGRSGKSCRLRWFNQLDPRI R+P
Sbjct: 13  RSSCPRGHWRPAEDEKLRQLVEQYGPQNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRP 72

Query: 79  FSEEEEERLLAAHQIHGNKWSLIARLFPGRTDNAVKNHWHVIMARKQRERSKLCGSKRTF 138
           FSE+EEERL+ AH+IHGNKW+LI+RLFPGRTDNAVKNHWHV+MARKQRE+SK+CG +  +
Sbjct: 73  FSEDEEERLIGAHRIHGNKWALISRLFPGRTDNAVKNHWHVLMARKQREQSKICGKRSLY 132

Query: 139 QEFSAF-NFPGNQTESLGTY----NINDNNNSFLELQNSHKDGTVWNFRHYLKGSNDNNI 198
           Q+     NF  +   S   +    N N+NNN+ + +Q  +  G+  NF  + +  N + +
Sbjct: 133 QQQQQHDNFLSDSKSSCYGFRRRNNNNNNNNNNMRIQEGNY-GSKINFFEF-QNPNKDRV 192

Query: 199 SILHDTY-------------HKFRTPSSARVCYPNHKIPFGVYEFGSNSEVIKRELAFVN 258
             +  TY             H FR  S  +     + + F ++  G ++   KR   F N
Sbjct: 193 FSMSTTYSSSSPEFCGRIGSHLFRESSIDQKSLCQNNLSFSIHGRGGDNNNCKRSTTFQN 252

Query: 259 FIANTDRHRH---------------YHHRLLH---DQERQEDESLTDKDVPFIDFLGVGV 285
             +  DR+ +                  R+L    +Q++  +E+   KD+PFIDFLGVG+
Sbjct: 253 PFSYVDRNEYDSITERVVNVSNSTFSFGRILKENIEQQKYGEEAREKKDIPFIDFLGVGI 312

[Close]
BLAST of CmoCh04G025320 vs. NCBI nr
Match: gi|460384106|ref|XP_004237755.1| (PREDICTED: transcription factor MYB59-like [Solanum lycopersicum])

HSP 1 Score: 255.4 bits (651), Expect = 1.2e-64
Identity = 139/299 (46.49%), Postives = 189/299 (63.21%), Query Frame = 1 

Query: 19  KSSCSRGHWRPAEDEKLRQLVDKYGAQNWNSIAQKLQGRSGKSCRLRWFNQLDPRIIRKP 78
           +SSC RGHWRPAEDEKLRQLV++YG QNWNSIA+KLQGRSGKSCRLRWFNQLDPRI R+P
Sbjct: 13  RSSCPRGHWRPAEDEKLRQLVEQYGPQNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRP 72

Query: 79  FSEEEEERLLAAHQIHGNKWSLIARLFPGRTDNAVKNHWHVIMARKQRERSKLCGSKRTF 138
           FSE+EEE+L+ AH+IHGNKW+LI+RLFPGRTDNAVKNHWHV+MARKQRE+SK+CG +  +
Sbjct: 73  FSEDEEEKLIGAHRIHGNKWALISRLFPGRTDNAVKNHWHVLMARKQREQSKICGKRSLY 132

Query: 139 QEFSAFNFPGNQTESLGTY--NINDNNNSFLELQNSHKDGTVWNFRHYLKGSNDNNISIL 198
           Q+    +F  +   S   +    N+NNN+ + +Q  +  G+  NF  + +  N + +  +
Sbjct: 133 QQQQHDSFLSDSKSSCYGFRRRNNNNNNNNMRIQEGNY-GSKINFFEF-QNPNKDRVFSM 192

Query: 199 HDTY-------------HKFRTPSSARVCYPNHKIPFGVYEFGSNSEVIKRELAFVNFIA 258
             TY             H FR  S  +     + + F  +  G ++   KR   F N  +
Sbjct: 193 STTYSSSSPEFCGRIGSHLFRESSIDQKSLRQNNLSFSSHGRGGDNNNCKRSTTFQNPFS 252

Query: 259 NTDRHRH--YHHRLLH----------------DQERQEDESLTDKDVPFIDFLGVGVSS 285
             DR+ +     R+++                +Q++  +E+   KD+PFIDFLGVG+SS
Sbjct: 253 YVDRNEYDSITERVVNVSNSTFSFGKILKENIEQQKYGEEAREKKDIPFIDFLGVGISS 309

The following BLAST results are available for this feature:
BLAST of CmoCh04G025320 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MYB44_ARATH8.6e-3159.41Transcription factor MYB44 OS=Arabidopsis thaliana GN=MYB44 PE=2 SV=1[more]
MYB_XENLA4.0e-2845.16Transcriptional activator Myb OS=Xenopus laevis GN=myb PE=2 SV=1[more]
MYBB_XENLA2.9e-2650.50Myb-related protein B OS=Xenopus laevis GN=mybl2 PE=2 SV=2[more]
MYB_HUMAN4.9e-2643.65Transcriptional activator Myb OS=Homo sapiens GN=MYB PE=1 SV=2[more]
MYB_BOVIN1.4e-2542.86Transcriptional activator Myb OS=Bos taurus GN=MYB PE=2 SV=1[more]
BLAST of CmoCh04G025320 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KGJ9_CUCSA7.5e-9059.81Uncharacterized protein OS=Cucumis sativus GN=Csa_6G344210 PE=4 SV=1[more]
E0CQL8_VITVI9.8e-6648.11Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g15260 PE=4 SV=... [more]
K4BT45_SOLLC8.3e-6546.49Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1[more]
A0A067H7L1_CITSI1.1e-6447.92Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g020106mg PE=4 SV=1[more]
V4TD41_9ROSI1.1e-6447.92Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001803mg PE=4 SV=1[more]
BLAST of CmoCh04G025320 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G17950.12.2e-5383.64 myb domain protein 52[more]
AT1G73410.16.1e-5144.57 myb domain protein 54[more]
AT1G69560.14.0e-5068.18 myb domain protein 105[more]
AT1G26780.22.8e-4842.18 myb domain protein 117[more]
AT4G33450.12.4e-4743.51 myb domain protein 69[more]
BLAST of CmoCh04G025320 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778714940|ref|XP_004144300.2|1.1e-8959.81PREDICTED: transcription factor MYB57-like isoform X1 [Cucumis sativus][more]
gi|659081894|ref|XP_008441565.1|4.1e-8957.62PREDICTED: transcriptional activator Myb-like isoform X1 [Cucumis melo][more]
gi|359492779|ref|XP_002278632.2|1.4e-6548.11PREDICTED: trichome differentiation protein GL1 [Vitis vinifera][more]
gi|970023577|ref|XP_015073122.1|1.8e-6547.35PREDICTED: transcription factor MYB59-like [Solanum pennellii][more]
gi|460384106|ref|XP_004237755.1|1.2e-6446.49PREDICTED: transcription factor MYB59-like [Solanum lycopersicum][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR009057Homeobox-like_sf
IPR017930Myb_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:2000652 regulation of secondary cell wall biogenesis
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G025320.1CmoCh04G025320.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 24..69
score: 5.0E-17coord: 76..118
score: 5.0
IPR001005SANT/Myb domainSMARTSM00717santcoord: 75..123
score: 1.3E-15coord: 23..72
score: 3.7
IPR009057Homeodomain-likeGENE3DG3DSA:1.10.10.60coord: 78..124
score: 1.5E-21coord: 25..77
score: 2.3
IPR009057Homeodomain-likeunknownSSF46689Homeodomain-likecoord: 23..117
score: 4.12
IPR017930Myb domainPROFILEPS51294HTH_MYBcoord: 19..70
score: 19.964coord: 71..125
score: 26
NoneNo IPR availablePANTHERPTHR10641MYB-LIKE DNA-BINDING PROTEIN MYBcoord: 208..237
score: 2.0E-89coord: 273..283
score: 2.0E-89coord: 1..140
score: 2.0
NoneNo IPR availablePANTHERPTHR10641:SF496SUBFAMILY NOT NAMEDcoord: 273..283
score: 2.0E-89coord: 208..237
score: 2.0E-89coord: 1..140
score: 2.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh04G025320Cucsa.077160Cucumber (Gy14) v1cgycmoB0128
CmoCh04G025320CmaCh15G006330Cucurbita maxima (Rimu)cmacmoB309
CmoCh04G025320CmaCh04G024150Cucurbita maxima (Rimu)cmacmoB729
CmoCh04G025320Cla013871Watermelon (97103) v1cmowmB661
CmoCh04G025320Csa6G344210Cucumber (Chinese Long) v2cmocuB762
CmoCh04G025320MELO3C008423Melon (DHL92) v3.5.1cmomeB672
CmoCh04G025320ClCG08G006350Watermelon (Charleston Gray)cmowcgB680
CmoCh04G025320CSPI06G18190Wild cucumber (PI 183967)cmocpiB771
CmoCh04G025320Lsi08G005130Bottle gourd (USVL1VR-Ls)cmolsiB697
CmoCh04G025320Cp4.1LG13g04250Cucurbita pepo (Zucchini)cmocpeB657
CmoCh04G025320Cp4.1LG01g20980Cucurbita pepo (Zucchini)cmocpeB673
CmoCh04G025320Cp4.1LG06g07790Cucurbita pepo (Zucchini)cmocpeB708
CmoCh04G025320MELO3C008423.2Melon (DHL92) v3.6.1cmomedB760
CmoCh04G025320CsaV3_6G031070Cucumber (Chinese Long) v3cmocucB0902
CmoCh04G025320Cla97C08G149140Watermelon (97103) v2cmowmbB760
CmoCh04G025320Bhi04G001431Wax gourdcmowgoB0865
CmoCh04G025320CsGy6G017650Cucumber (Gy14) v2cgybcmoB819
CmoCh04G025320Carg01573Silver-seed gourdcarcmoB1121
CmoCh04G025320Carg15764Silver-seed gourdcarcmoB0094
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh04G025320CmoCh09G010810Cucurbita moschata (Rifu)cmocmoB029
CmoCh04G025320CmoCh15G006410Cucurbita moschata (Rifu)cmocmoB262
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh04G025320Cucurbita moschata (Rifu)cmocmoB367