Cucsa.076090 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.076090
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	NifU-like protein 2
Location	scaffold00789 : 551826 .. 554292 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGGTGAGTGGTGAGGGAAGGCTAAGATATTGTTAATTCCGGAGGGAATTAGGGGGAATTAGAAGAAGAAGAAGAACCTAAGCGGAGGAGAACGGTGAAGAACAAGAAGAAGCCAACTAGGTAGAAGGAAGAAACCAAATTTTGAAAACTCACTTTTCTCATTCTCTTCATCGATTCTCATCCAACTCATCCTTCTTTGGGAGAACCAACAGCACGATCGGTTTCAATATGCAAGCTGTGTTGTTGAATTTGAATACTTCCCCTTACACTAGATCTCCGCAAACCCTAGAATCTCCTTCTTGTTCTCGTAATTTCAAGGTTTCTTTTCATTTCATCTCTCTGTTGCTCAATCCTTTCTTGGGTTCCTTTTAATCAAATTAACGTGTTTATTTCTTGTAGGTCTCGAGATTTTTTGTTCTTCGTCATGTTTCACCTTGGCGGAAATCGTGTCGTTCCCTTCGAATTCGATTGCCGTCTAGCTCACGCACGCGATGTAGGATTCCTTTTATGTCTTCTATTGAAGTGATTTAGACTGCATCAAGTTCTGGTTGTTGATTCTGTTTGATGATTTCTTTTTATTATCTTACGCTTAAGTAAGTGCGTCTAATTAGAATGAAGAGGATGAACAAACCCACTCCCCCATCCTTTTTTCTTTTGAGATTACCAATCTTTGTTTTTTATTCGAAACTTTCTGTTTTTCAGTTATAAGAGCTGTTGCAACTCCTAATTCGGCGTTGGAATTGCCACTGACTGTGGAAAATGTTGAGAGTGTGTTGGACGAAGTTCGACCGTATCTTATTGCAGATGGTGGAAATGTGGCATTACATGAAATCGACGGAAACGTTGTTCGGTTGAAGCTACAAGGAGCTTGCGGTTCATGTCCTAGTTCTGTTACGACCATGAAGATGGGAATTGAACGCCGTTTGATGGAGAAGATCCCTGAAATTGTTGCTGTGGAACCAATAGCAGATGAAGAAACTGGATTGGAGCTCAACGAAGAGAATATAGAGAAGGTACGGAATGTTCTCTTTCTATCAATCTTATTCATTCTATTATTTAGATTCAACTTAAATGTCATTTCTGAATTGCTCTTTTGCCTTAAACACACAAAACCCAACTCATAACGAGAAAGGGCTGCTGCTGCCCACCAAGGTAATTGAACTCTTTTTTGTGAGGAAGAGGCACAGTGGTATTAGCTTCCGCGGGTTCTTTGATATGAGTGGTTATTGAGAAATGAAGGATCCAAATACTTAATTACATGCCACTCTAAATTAGCCTAGAAAAAGTTCTAAAAATTATGGAACCTATGGTCAAACTCCAATGGCTTGGCTAGCTAAACTTTTATGGATTTTGATATGTATGGTTATTGAGAGAAATTAAGGGTTGGAATAAGCATGCATTCCTTTTACTCAACTTCAACGAGACATCATCTGGCATCTTTCACTTTTATGAATACTCTTGATTAAGCAACACTTCAAGCTGTTTGCGAACCTATTATTTCTGATTTCATGATTACATCTTCCTTTCCTTCTTCGTAGCAATATCAATCAATTTAGTGCATCCTTAGGTTTGTGGGTCTGATGTTCTCATCCATGTGCCACTTTACTTGGTTTTGGTACAAGACTACGACCAGCTTGATTTGGCTTGCAGCATTAGAATTTGCTTCTCATAAAGGGCTGTATAATTGAACTGTACTGGTGTTTTATGTTCGAAAACCCTATCATTCCTCAAGTTTTATCAACTTTCTCTTGTTGTAGCGAAAAGTGAACTTAGCTCAACAACAATTGACATGATTTCCTTTTCTAAAGGTTGGACGTTTGATCCACCATCTCTTCAGCTGTACTTAATAAAACTTCCCCTGGCTGTAAGAAAAACACACTTTTCCCCATCCTGGCTTGTCTGGTTGATGATTTCTTTATCCCACCTCATCCTTGCATCCAAATTAGCTGGTATTCCTTACCACCACTTGGATTGGCTGTATTTCCATCGTTATTATTATCACCTATTCAACCTTGATGGAAATTTCAATTCCTCCTTCAACCCCATGAAATATTGGAAACAAATTAAGACCCATCCTTGTTGTACAAATGTGGTTGAATGTTATTATCCCTTATCTTTTACAGTGATGCCATGAGATCGATTTAGACCACAAATTTAGAAGCTAAACTTTCTCCGTACCCTTTTCGCAGGTACTTGAAGAGATAAGACCTTACCTTGTTGGGGCAGCGGGAGGATCTCTTGAACTTGTGGGTATTGAGGAGCCAATAGTTAAAGTGCGGATTACAGGGCCAGCCGCTGGGGTTATGACAGTTCGTGTGGCTGTTACACAGAAACTGCGAGAGAAGATACCATCCATAGCGGCGGTTCAACTTTTGTCATAA

mRNA sequence

GTGGTGAGTGGTGAGGGAAGGCTAAGATATTGTTAATTCCGGAGGGAATTAGGGGGAATTagaagaagaagaagaacctaagcggaggagaacggtgaagaacaagaagaagCCAACTAGCACGATCGGTTTCAATATGCAAGCTGTGTTGTTGAATTTGAATACTTCCCCTTACACTAGATCTCCGCAAACCCTAGAATCTCCTTCTTGTTCTCGTAATTTCAAGGTTTCTTTTCATTTCATCTCTCTGTTGCTCAATCCTTTCTTGGTTATAAGAGCTGTTGCAACTCCTAATTCGGCGTTGGAATTGCCACTGACTGTGGAAAATGTTGAGAGTGTGTTGGACGAAGTTCGACCGTATCTTATTGCAGATGGTGGAAATGTGGCATTACATGAAATCGACGGAAACGTTGTTCGGTTGAAGCTACAAGGAGCTTGCGGTTCATGTCCTAGTTCTGTTACGACCATGAAGATGGGAATTGAACGCCGTTTGATGGAGAAGATCCCTGAAATTGTTGCTGTGGAACCAATAGCAGATGAAGAAACTGGATTGGAGCTCAACGAAGAGAATATAGAGAAGGTACTTGAAGAGATAAGACCTTACCTTGTTGGGGCAGCGGGAGGATCTCTTGAACTTGTGGGTATTGAGGAGCCAATAGTTAAAGTGCGGATTACAGGGCCAGCCGCTGGGGTTATGACAGTTCGTGTGGCTGTTACACAGAAACTGCGAGAGAAGATACCATCCATAGCGGCGGTTCAACTTTTGTCATAA

Coding sequence (CDS)

ATGCAAGCTGTGTTGTTGAATTTGAATACTTCCCCTTACACTAGATCTCCGCAAACCCTAGAATCTCCTTCTTGTTCTCGTAATTTCAAGGTTTCTTTTCATTTCATCTCTCTGTTGCTCAATCCTTTCTTGGTTATAAGAGCTGTTGCAACTCCTAATTCGGCGTTGGAATTGCCACTGACTGTGGAAAATGTTGAGAGTGTGTTGGACGAAGTTCGACCGTATCTTATTGCAGATGGTGGAAATGTGGCATTACATGAAATCGACGGAAACGTTGTTCGGTTGAAGCTACAAGGAGCTTGCGGTTCATGTCCTAGTTCTGTTACGACCATGAAGATGGGAATTGAACGCCGTTTGATGGAGAAGATCCCTGAAATTGTTGCTGTGGAACCAATAGCAGATGAAGAAACTGGATTGGAGCTCAACGAAGAGAATATAGAGAAGGTACTTGAAGAGATAAGACCTTACCTTGTTGGGGCAGCGGGAGGATCTCTTGAACTTGTGGGTATTGAGGAGCCAATAGTTAAAGTGCGGATTACAGGGCCAGCCGCTGGGGTTATGACAGTTCGTGTGGCTGTTACACAGAAACTGCGAGAGAAGATACCATCCATAGCGGCGGTTCAACTTTTGTCATAA

Protein sequence

MQAVLLNLNTSPYTRSPQTLESPSCSRNFKVSFHFISLLLNPFLVIRAVATPNSALELPLTVENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKLQGACGSCPSSVTTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLLS*

Homology

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BLAST of Cucsa.076090 vs. Swiss-Prot
Match: NIFU2_ARATH (NifU-like protein 2, chloroplastic OS=Arabidopsis thaliana GN=NIFU2 PE=1 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 8.4e-77
Identity = 154/233 (66.09%), Postives = 179/233 (76.82%), Query Frame = 1


Query: 5   LLNLNTSPYTRSPQTLESPSCSRNFKV----------SRFFVLRHVSPWRKSCRSLRIRL 64
           LL LN +  +R+P     PS S +  +          +   V R  +P R+         
Sbjct: 3   LLTLNPAAISRTPPQAIDPSSSSSLLLPFPQILSSQRALGLVARPCNPLRRGLSRFLSSR 62

Query: 65  PSSSRTRFIRAVATPNSALELPLTVENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKL 124
               R++ ++AVATP+  LE+PLT ENVESVLDE+RPYL++DGGNVALHEIDGN+VR+KL
Sbjct: 63  QLFRRSKVVKAVATPDPILEVPLTEENVESVLDEIRPYLMSDGGNVALHEIDGNIVRVKL 122

Query: 125 QGACGSCPSSVTTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEENIEKVLEEIRPYL 184
           QGACGSCPSS  TMKMGIERRLMEKIPEIVAVE + DEETGLELNEENIEKVLEEIRPYL
Sbjct: 123 QGACGSCPSSTMTMKMGIERRLMEKIPEIVAVEALPDEETGLELNEENIEKVLEEIRPYL 182

Query: 185 VGAAGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLL 228
           +G A GSL+LV IE+PIVK+RITGPAAGVMTVRVAVTQKLREKIPSIAAVQL+
Sbjct: 183 IGTADGSLDLVEIEDPIVKIRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLI 235

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BLAST of Cucsa.076090 vs. Swiss-Prot
Match: NIFU1_ORYSJ (NifU-like protein 1, chloroplastic OS=Oryza sativa subsp. japonica GN=NIFU1 PE=1 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 5.3e-63
Identity = 137/222 (61.71%), Postives = 163/222 (73.42%), Query Frame = 1


Query: 16  SPQTLESPSCSRNFKVSRFFVLRHVSPWRKSCRSLR------IRLPSSSRTRFI-RAVA- 75
           +P T  S S S  FKV+ +        W  SCRS        +  P+  R   +  A+A 
Sbjct: 15  APSTTTSSSAS--FKVAAY-------AW-SSCRSSSSPATRLVAAPNHQRPPLVVGAIAG 74

Query: 76  -TPNSALELPLTVENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKLQGACGSCPSSVT 135
             P +A++LPLT  NVESVLD+VRPYL ADGG+VALHEI GNVVRLKLQGACGSCPSS+ 
Sbjct: 75  LDPVTAVQLPLTAGNVESVLDQVRPYLTADGGDVALHEIAGNVVRLKLQGACGSCPSSLI 134

Query: 136 TMKMGIERRLMEKIPEIVAVEPIADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVG 195
           T+K GIERRLMEKIP++ AVEP+ D+ETGLELNEEN+EKVL EIRPYL G  GG L+ + 
Sbjct: 135 TIKRGIERRLMEKIPDVAAVEPVTDKETGLELNEENVEKVLNEIRPYLAGTGGGGLQFLM 194

Query: 196 IEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLLS 229
           I+ PIVKVR+TGPAA V TVR+AV++KLREKIPSI  VQLLS
Sbjct: 195 IKGPIVKVRLTGPAAVVRTVRIAVSKKLREKIPSIQIVQLLS 226

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BLAST of Cucsa.076090 vs. Swiss-Prot
Match: NIFU3_ARATH (NifU-like protein 3, chloroplastic OS=Arabidopsis thaliana GN=NIFU3 PE=2 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 7.4e-57
Identity = 117/154 (75.97%), Postives = 130/154 (84.42%), Query Frame = 1


Query: 75  LPLTVENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKLQGACGSCPSSVTTMKMGIER 134
           +PLT ENVE VLDEVRP L+ADGGNVALHEIDG VV LKLQGACGSCPSS  T+KMGIE 
Sbjct: 82  MPLTEENVERVLDEVRPSLMADGGNVALHEIDGLVVVLKLQGACGSCPSSSMTLKMGIES 141

Query: 135 RLMEKIPEIVAVEPIADEET-GLELNEENIEKVLEEIRPYLVGAAGGSLELVGIEEPIVK 194
           RL +KIPEI++VE   + ET GLELN+ENIEKVL E+RPYL G  GG LELV I+  +VK
Sbjct: 142 RLRDKIPEIMSVEQFLESETGGLELNDENIEKVLSELRPYLSGTGGGGLELVEIDGYVVK 201

Query: 195 VRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLL 228
           VR+TGPAAGVMTVRVA+TQKLRE IPSI AVQLL
Sbjct: 202 VRLTGPAAGVMTVRVALTQKLRETIPSIGAVQLL 235

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BLAST of Cucsa.076090 vs. Swiss-Prot
Match: NIFU1_ARATH (NifU-like protein 1, chloroplastic OS=Arabidopsis thaliana GN=NIFU1 PE=1 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 5.9e-22
Identity = 61/147 (41.50%), Postives = 92/147 (62.59%), Query Frame = 1


Query: 71  SALELPLTVENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKLQGACGSCPSSVTTMKM 130
           SA    LT +NV+ VL++VRP+LI+DGGNV +  ++  VV LKLQGAC SCPSS TTM M
Sbjct: 79  SAQTFDLTPQNVDLVLEDVRPFLISDGGNVDVVSVEDGVVSLKLQGACTSCPSSSTTMTM 138

Query: 131 GIERRLMEKIPEIVA-VEPIADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVGIEE 190
           GIER L EK  + +  +  + DEE   ++  E +   L+ +RP  +   GGS+E++ +E 
Sbjct: 139 GIERVLKEKFGDALKDIRQVFDEEV-KQITVEAVNAHLDILRP-AIKNYGGSVEVLSVEG 198

Query: 191 PIVKVRITGPAAGVMTVRVAVTQKLRE 217
               V+  GP +  M ++ A+ +K ++
Sbjct: 199 EDCVVKYVGPESIGMGIQAAIKEKFKD 223

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BLAST of Cucsa.076090 vs. Swiss-Prot
Match: YUTI_BACSU (Putative nitrogen fixation protein YutI OS=Bacillus subtilis (strain 168) GN=yutI PE=3 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 8.2e-16
Identity = 37/70 (52.86%), Postives = 54/70 (77.14%), Query Frame = 1


Query: 80  ENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKLQGACGSCPSSVTTMKMGIERRLMEK 139
           E V+ VLD++RP+L+ DGG+  L ++D  +V+L+L GACGSCPSS  T+K GIER L+E+
Sbjct: 41  EQVQEVLDKLRPFLLRDGGDCELVDVDEGIVKLRLLGACGSCPSSTITLKAGIERALLEE 100

Query: 140 IPEIVAVEPI 150
           +P +V VE +
Sbjct: 101 VPGVVEVEQV 110

HSP 2 Score: 47.0 bits (110), Expect = 3.3e-04
Identity = 25/80 (31.25%), Postives = 51/80 (63.75%), Query Frame = 1


Query: 150 ADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVGIEEPIVKVRITGPA----AGVMT 209
           A+  T +E+ E+ +++VL+++RP+L+   GG  ELV ++E IVK+R+ G      +  +T
Sbjct: 31  ANVMTEVEMKEQ-VQEVLDKLRPFLL-RDGGDCELVDVDEGIVKLRLLGACGSCPSSTIT 90

Query: 210 VRVAVTQKLREKIPSIAAVQ 226
           ++  + + L E++P +  V+
Sbjct: 91  LKAGIERALLEEVPGVVEVE 108

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BLAST of Cucsa.076090 vs. TrEMBL
Match: A0A0A0KRX2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G586560 PE=4 SV=1)

HSP 1 Score: 441.0 bits (1133), Expect = 8.6e-121
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 1


Query: 1   MQAVLLNLNTSPYTRSPQTLESPSCSRNFKVSRFFVLRHVSPWRKSCRSLRIRLPSSSRT 60
           MQAVLLNLNTSPYTRSPQTLESPSCSRNFKVSRFFVLRHVSPWRKSCRSLRIRLPSSSRT
Sbjct: 1   MQAVLLNLNTSPYTRSPQTLESPSCSRNFKVSRFFVLRHVSPWRKSCRSLRIRLPSSSRT 60

Query: 61  RFIRAVATPNSALELPLTVENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKLQGACGS 120
           RFIRAVATPNSALELPLTVENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKLQGACGS
Sbjct: 61  RFIRAVATPNSALELPLTVENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKLQGACGS 120

Query: 121 CPSSVTTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEENIEKVLEEIRPYLVGAAGG 180
           CPSSVTTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEENIEKVLEEIRPYLVGAAGG
Sbjct: 121 CPSSVTTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEENIEKVLEEIRPYLVGAAGG 180

Query: 181 SLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLLS 229
           SLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLLS
Sbjct: 181 SLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLLS 228

[Close]

BLAST of Cucsa.076090 vs. TrEMBL
Match: A0A067LEA0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00216 PE=4 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 2.7e-90
Identity = 189/234 (80.77%), Postives = 199/234 (85.04%), Query Frame = 1


Query: 1   MQAVLLNLNTSPYTRSPQTLESPSCSRNFKVSRFFVLRHVSPWRKS-------CRSLRIR 60
           MQAV+LN     Y R+ QT +SPS S  FK S  F  + VS  R+        CRSLRIR
Sbjct: 1   MQAVVLN---PIYCRAQQTPDSPSSSHPFKSSSLFATQ-VSLKRERNQLRRIPCRSLRIR 60

Query: 61  LPSSSRTRFIRAVATPNSALELPLTVENVESVLDEVRPYLIADGGNVALHEIDGNVVRLK 120
           LP+ +R   +RAVATP SALELPLT ENVESVLDEVRPYLIADGGNVALHEIDGNVVRLK
Sbjct: 61  LPAFNRRLVLRAVATPESALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNVVRLK 120

Query: 121 LQGACGSCPSSVTTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEENIEKVLEEIRPY 180
           LQGACGSCPSSV TMKMGIERRLMEKIPEIVAVEP+ADEETGLELNEENIEKVLEEIRPY
Sbjct: 121 LQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVEPVADEETGLELNEENIEKVLEEIRPY 180

Query: 181 LVGAAGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLL 228
           LVGAAGGSLELV IEEPIVKVRITGPAAGVMTVRVAVTQKLREKIP+IAAVQLL
Sbjct: 181 LVGAAGGSLELVAIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 230

[Close]

BLAST of Cucsa.076090 vs. TrEMBL
Match: W9QYF8_9ROSA (NifU-like protein 2 OS=Morus notabilis GN=L484_018448 PE=4 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 3.3e-88
Identity = 183/231 (79.22%), Postives = 197/231 (85.28%), Query Frame = 1


Query: 1   MQAVLLNLNTSPYTRSPQTLESPSCSRNFKV---SRFFVLRHVSPWRKSCRSLRIRLPSS 60
           MQAV+LN  + PY R+ QTL+ PS S+N+     +     R   P R+    +RIRLPS+
Sbjct: 1   MQAVVLN--SRPYCRAQQTLQPPSVSKNWSSLGSTHASFRRGHFPVRRCF--IRIRLPSA 60

Query: 61  SRTRFIRAVATPNSALELPLTVENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKLQGA 120
           SR   ++AVATPN ALELPLT ENVESVLDE+RPYLIADGGNVALHEIDGNVVRLKLQGA
Sbjct: 61  SRGLVVKAVATPNPALELPLTAENVESVLDEIRPYLIADGGNVALHEIDGNVVRLKLQGA 120

Query: 121 CGSCPSSVTTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEENIEKVLEEIRPYLVGA 180
           CGSCPSSV TMKMGIERRLME IPEIVAVEPIADEE GLELNEENIEKVLEEIRPYLVGA
Sbjct: 121 CGSCPSSVVTMKMGIERRLMENIPEIVAVEPIADEEMGLELNEENIEKVLEEIRPYLVGA 180

Query: 181 AGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLLS 229
           AGGSLELV IEEPIVKVRITGPAAGVMTVRVAVTQKLREKIP+IAAVQLLS
Sbjct: 181 AGGSLELVAIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLLS 227

[Close]

BLAST of Cucsa.076090 vs. TrEMBL
Match: D7TGV2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0035g00770 PE=4 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 8.1e-87
Identity = 180/228 (78.95%), Postives = 194/228 (85.09%), Query Frame = 1


Query: 1   MQAVLLNLNTSPYTRSPQTLE-SPSCSRNFKVSRFFVLRHVSPWRKSCRSLRIRLPSSSR 60
           MQ V++  N S   R+   LE S S S   K+  FF        R S RSLRIR P  +R
Sbjct: 1   MQGVVV-ANPSYCCRAKHALEPSSSSSSPIKIPSFFTRGSDLRRRASSRSLRIRNPIRTR 60

Query: 61  TRFIRAVATPNSALELPLTVENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKLQGACG 120
           +R ++AVATP+SA+ELPLT ENVESVLDE+RPYLI+DGGNVALHEIDGNVVRLKLQGACG
Sbjct: 61  SRVVKAVATPDSAVELPLTAENVESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACG 120

Query: 121 SCPSSVTTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEENIEKVLEEIRPYLVGAAG 180
           SCPSSV TMKMGIERRLMEKIPEIVAVEPIADEETGLELNEENIEKVLEEIRPYLVGAAG
Sbjct: 121 SCPSSVMTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEENIEKVLEEIRPYLVGAAG 180

Query: 181 GSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLL 228
           GSLELVGI+EPIVKVRITGPAAGVMTVRVAVTQKLREKIP+IAAVQLL
Sbjct: 181 GSLELVGIDEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 227

[Close]

BLAST of Cucsa.076090 vs. TrEMBL
Match: B9SSN2_RICCO (Nitrogen fixation protein nifU, putative OS=Ricinus communis GN=RCOM_1374380 PE=4 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 8.1e-87
Identity = 182/229 (79.48%), Postives = 193/229 (84.28%), Query Frame = 1


Query: 1   MQAVLLNLNTSPYTRSPQTLES-PSCSRNFKVSRFFVLR-HVSPWRKSCRSLRIRLPSSS 60
           MQAV++N     Y+R  QTL+S PS SR FK S  F  R  ++  R   R +  R    +
Sbjct: 1   MQAVVIN---PTYSRPHQTLDSAPSSSRPFKSSSLFSARVSLNRGRNHLRRIPCRSVRLT 60

Query: 61  RTRFIRAVATPNSALELPLTVENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKLQGAC 120
           R   +RAVATPNSALELPLT ENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKLQGAC
Sbjct: 61  RRLVVRAVATPNSALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKLQGAC 120

Query: 121 GSCPSSVTTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEENIEKVLEEIRPYLVGAA 180
           GSCPSSV TMKMGIERRLMEKIPEIVAVEPIADEETGLELNEENIEKVLEEIRPYLVGAA
Sbjct: 121 GSCPSSVMTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEENIEKVLEEIRPYLVGAA 180

Query: 181 GGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLL 228
           GGSLELV IEEPI K+RITGPAAGVMTVRVAVTQKLREKIP+IAAVQLL
Sbjct: 181 GGSLELVAIEEPIAKIRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 226

[Close]

BLAST of Cucsa.076090 vs. TAIR10
Match: AT5G49940.1 (AT5G49940.1 NIFU-like protein 2)

HSP 1 Score: 288.1 bits (736), Expect = 4.7e-78
Identity = 154/233 (66.09%), Postives = 179/233 (76.82%), Query Frame = 1


Query: 5   LLNLNTSPYTRSPQTLESPSCSRNFKV----------SRFFVLRHVSPWRKSCRSLRIRL 64
           LL LN +  +R+P     PS S +  +          +   V R  +P R+         
Sbjct: 3   LLTLNPAAISRTPPQAIDPSSSSSLLLPFPQILSSQRALGLVARPCNPLRRGLSRFLSSR 62

Query: 65  PSSSRTRFIRAVATPNSALELPLTVENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKL 124
               R++ ++AVATP+  LE+PLT ENVESVLDE+RPYL++DGGNVALHEIDGN+VR+KL
Sbjct: 63  QLFRRSKVVKAVATPDPILEVPLTEENVESVLDEIRPYLMSDGGNVALHEIDGNIVRVKL 122

Query: 125 QGACGSCPSSVTTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEENIEKVLEEIRPYL 184
           QGACGSCPSS  TMKMGIERRLMEKIPEIVAVE + DEETGLELNEENIEKVLEEIRPYL
Sbjct: 123 QGACGSCPSSTMTMKMGIERRLMEKIPEIVAVEALPDEETGLELNEENIEKVLEEIRPYL 182

Query: 185 VGAAGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLL 228
           +G A GSL+LV IE+PIVK+RITGPAAGVMTVRVAVTQKLREKIPSIAAVQL+
Sbjct: 183 IGTADGSLDLVEIEDPIVKIRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLI 235

[Close]

BLAST of Cucsa.076090 vs. TAIR10
Match: AT4G25910.1 (AT4G25910.1 NFU domain protein 3)

HSP 1 Score: 221.9 bits (564), Expect = 4.2e-58
Identity = 117/154 (75.97%), Postives = 130/154 (84.42%), Query Frame = 1


Query: 75  LPLTVENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKLQGACGSCPSSVTTMKMGIER 134
           +PLT ENVE VLDEVRP L+ADGGNVALHEIDG VV LKLQGACGSCPSS  T+KMGIE 
Sbjct: 82  MPLTEENVERVLDEVRPSLMADGGNVALHEIDGLVVVLKLQGACGSCPSSSMTLKMGIES 141

Query: 135 RLMEKIPEIVAVEPIADEET-GLELNEENIEKVLEEIRPYLVGAAGGSLELVGIEEPIVK 194
           RL +KIPEI++VE   + ET GLELN+ENIEKVL E+RPYL G  GG LELV I+  +VK
Sbjct: 142 RLRDKIPEIMSVEQFLESETGGLELNDENIEKVLSELRPYLSGTGGGGLELVEIDGYVVK 201

Query: 195 VRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLL 228
           VR+TGPAAGVMTVRVA+TQKLRE IPSI AVQLL
Sbjct: 202 VRLTGPAAGVMTVRVALTQKLRETIPSIGAVQLL 235

[Close]

BLAST of Cucsa.076090 vs. TAIR10
Match: AT4G01940.1 (AT4G01940.1 NFU domain protein 1)

HSP 1 Score: 105.9 bits (263), Expect = 3.3e-23
Identity = 61/147 (41.50%), Postives = 92/147 (62.59%), Query Frame = 1


Query: 71  SALELPLTVENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKLQGACGSCPSSVTTMKM 130
           SA    LT +NV+ VL++VRP+LI+DGGNV +  ++  VV LKLQGAC SCPSS TTM M
Sbjct: 79  SAQTFDLTPQNVDLVLEDVRPFLISDGGNVDVVSVEDGVVSLKLQGACTSCPSSSTTMTM 138

Query: 131 GIERRLMEKIPEIVA-VEPIADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVGIEE 190
           GIER L EK  + +  +  + DEE   ++  E +   L+ +RP  +   GGS+E++ +E 
Sbjct: 139 GIERVLKEKFGDALKDIRQVFDEEV-KQITVEAVNAHLDILRP-AIKNYGGSVEVLSVEG 198

Query: 191 PIVKVRITGPAAGVMTVRVAVTQKLRE 217
               V+  GP +  M ++ A+ +K ++
Sbjct: 199 EDCVVKYVGPESIGMGIQAAIKEKFKD 223

[Close]

BLAST of Cucsa.076090 vs. TAIR10
Match: AT3G20970.1 (AT3G20970.1 NFU domain protein 4)

HSP 1 Score: 57.8 bits (138), Expect = 1.0e-08
Identity = 34/92 (36.96%), Postives = 51/92 (55.43%), Query Frame = 1


Query: 78  TVENVESVLD-EVRPYLIADGGNVALHEID--GNVVRLKLQGACGSCPSSVTTMKMGIER 137
           TV  ++ +L+  +RP +  DGG++     D    +V+L++QGAC  CPSS  T+K GIE 
Sbjct: 192 TVAMIKELLETRIRPAVQDDGGDIEYCGFDPESGIVKLRMQGACSGCPSSSVTLKSGIEN 251

Query: 138 RLMEKIPEIVAVEPIAD--EETGLELNEENIE 165
            LM  + E+  VE   D  +E G    E  +E
Sbjct: 252 MLMHYVSEVKGVEQEFDGEDEEGTLSGEMRVE 283

[Close]

BLAST of Cucsa.076090 vs. TAIR10
Match: AT1G51390.1 (AT1G51390.1 NFU domain protein 5)

HSP 1 Score: 57.0 bits (136), Expect = 1.8e-08
Identity = 30/79 (37.97%), Postives = 47/79 (59.49%), Query Frame = 1


Query: 78  TVENVESVLD-EVRPYLIADGGNVAL--HEIDGNVVRLKLQGACGSCPSSVTTMKMGIER 137
           TV  ++ +L+  +RP +  DGG++     + +  +V+L++QGAC  CPSS  T+K GIE 
Sbjct: 187 TVAMIKELLETRIRPSVQDDGGDIEYCGFDTETGIVKLRMQGACSGCPSSSVTLKSGIEN 246

Query: 138 RLMEKIPEIVAVEPIADEE 154
            LM  + E+  VE   D E
Sbjct: 247 MLMHYVSEVKGVEQEFDGE 265

[Close]

BLAST of Cucsa.076090 vs. NCBI nr
Match: gi|449435134|ref|XP_004135350.1| (PREDICTED: nifU-like protein 2, chloroplastic [Cucumis sativus])

HSP 1 Score: 441.0 bits (1133), Expect = 1.2e-120
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 1


Query: 1   MQAVLLNLNTSPYTRSPQTLESPSCSRNFKVSRFFVLRHVSPWRKSCRSLRIRLPSSSRT 60
           MQAVLLNLNTSPYTRSPQTLESPSCSRNFKVSRFFVLRHVSPWRKSCRSLRIRLPSSSRT
Sbjct: 1   MQAVLLNLNTSPYTRSPQTLESPSCSRNFKVSRFFVLRHVSPWRKSCRSLRIRLPSSSRT 60

Query: 61  RFIRAVATPNSALELPLTVENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKLQGACGS 120
           RFIRAVATPNSALELPLTVENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKLQGACGS
Sbjct: 61  RFIRAVATPNSALELPLTVENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKLQGACGS 120

Query: 121 CPSSVTTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEENIEKVLEEIRPYLVGAAGG 180
           CPSSVTTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEENIEKVLEEIRPYLVGAAGG
Sbjct: 121 CPSSVTTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEENIEKVLEEIRPYLVGAAGG 180

Query: 181 SLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLLS 229
           SLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLLS
Sbjct: 181 SLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLLS 228

[Close]

BLAST of Cucsa.076090 vs. NCBI nr
Match: gi|659090369|ref|XP_008445979.1| (PREDICTED: nifU-like protein 2, chloroplastic [Cucumis melo])

HSP 1 Score: 418.7 bits (1075), Expect = 6.6e-114
Identity = 217/228 (95.18%), Postives = 221/228 (96.93%), Query Frame = 1


Query: 1   MQAVLLNLNTSPYTRSPQTLESPSCSRNFKVSRFFVLRHVSPWRKSCRSLRIRLPSSSRT 60
           M AV+ NLNTSPYTR+PQTLESPSCSRNFKVSRFF  RHVSPWRKSCRSLRIRLPSSSRT
Sbjct: 1   MHAVVWNLNTSPYTRAPQTLESPSCSRNFKVSRFF-FRHVSPWRKSCRSLRIRLPSSSRT 60

Query: 61  RFIRAVATPNSALELPLTVENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKLQGACGS 120
           R IRAVATPNSALELPLT ENVESVLDEVRPYLIADGGNVALHEIDGN+VRLKLQGACGS
Sbjct: 61  RLIRAVATPNSALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNIVRLKLQGACGS 120

Query: 121 CPSSVTTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEENIEKVLEEIRPYLVGAAGG 180
           CPSSVTTMKMGIERRLMEKIPEIVAVEPIAD ETGLELNEENIEKVLEEIRPYLVGAAGG
Sbjct: 121 CPSSVTTMKMGIERRLMEKIPEIVAVEPIADVETGLELNEENIEKVLEEIRPYLVGAAGG 180

Query: 181 SLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLLS 229
           SLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIP+IAAVQLLS
Sbjct: 181 SLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLLS 227

[Close]

BLAST of Cucsa.076090 vs. NCBI nr
Match: gi|802562967|ref|XP_012066647.1| (PREDICTED: nifU-like protein 2, chloroplastic [Jatropha curcas])

HSP 1 Score: 339.7 bits (870), Expect = 3.9e-90
Identity = 189/234 (80.77%), Postives = 199/234 (85.04%), Query Frame = 1


Query: 1   MQAVLLNLNTSPYTRSPQTLESPSCSRNFKVSRFFVLRHVSPWRKS-------CRSLRIR 60
           MQAV+LN     Y R+ QT +SPS S  FK S  F  + VS  R+        CRSLRIR
Sbjct: 1   MQAVVLN---PIYCRAQQTPDSPSSSHPFKSSSLFATQ-VSLKRERNQLRRIPCRSLRIR 60

Query: 61  LPSSSRTRFIRAVATPNSALELPLTVENVESVLDEVRPYLIADGGNVALHEIDGNVVRLK 120
           LP+ +R   +RAVATP SALELPLT ENVESVLDEVRPYLIADGGNVALHEIDGNVVRLK
Sbjct: 61  LPAFNRRLVLRAVATPESALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNVVRLK 120

Query: 121 LQGACGSCPSSVTTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEENIEKVLEEIRPY 180
           LQGACGSCPSSV TMKMGIERRLMEKIPEIVAVEP+ADEETGLELNEENIEKVLEEIRPY
Sbjct: 121 LQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVEPVADEETGLELNEENIEKVLEEIRPY 180

Query: 181 LVGAAGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLL 228
           LVGAAGGSLELV IEEPIVKVRITGPAAGVMTVRVAVTQKLREKIP+IAAVQLL
Sbjct: 181 LVGAAGGSLELVAIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 230

[Close]

BLAST of Cucsa.076090 vs. NCBI nr
Match: gi|703065335|ref|XP_010087421.1| (NifU-like protein 2 [Morus notabilis])

HSP 1 Score: 332.8 bits (852), Expect = 4.7e-88
Identity = 183/231 (79.22%), Postives = 197/231 (85.28%), Query Frame = 1


Query: 1   MQAVLLNLNTSPYTRSPQTLESPSCSRNFKV---SRFFVLRHVSPWRKSCRSLRIRLPSS 60
           MQAV+LN  + PY R+ QTL+ PS S+N+     +     R   P R+    +RIRLPS+
Sbjct: 1   MQAVVLN--SRPYCRAQQTLQPPSVSKNWSSLGSTHASFRRGHFPVRRCF--IRIRLPSA 60

Query: 61  SRTRFIRAVATPNSALELPLTVENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKLQGA 120
           SR   ++AVATPN ALELPLT ENVESVLDE+RPYLIADGGNVALHEIDGNVVRLKLQGA
Sbjct: 61  SRGLVVKAVATPNPALELPLTAENVESVLDEIRPYLIADGGNVALHEIDGNVVRLKLQGA 120

Query: 121 CGSCPSSVTTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEENIEKVLEEIRPYLVGA 180
           CGSCPSSV TMKMGIERRLME IPEIVAVEPIADEE GLELNEENIEKVLEEIRPYLVGA
Sbjct: 121 CGSCPSSVVTMKMGIERRLMENIPEIVAVEPIADEEMGLELNEENIEKVLEEIRPYLVGA 180

Query: 181 AGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLLS 229
           AGGSLELV IEEPIVKVRITGPAAGVMTVRVAVTQKLREKIP+IAAVQLLS
Sbjct: 181 AGGSLELVAIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLLS 227

[Close]

BLAST of Cucsa.076090 vs. NCBI nr
Match: gi|1021507883|ref|XP_016197280.1| (PREDICTED: nifU-like protein 2, chloroplastic [Arachis ipaensis])

HSP 1 Score: 330.9 bits (847), Expect = 1.8e-87
Identity = 179/228 (78.51%), Postives = 190/228 (83.33%), Query Frame = 1


Query: 1   MQAVLLNLNTSPYTRSPQTLESPSCSRNFKVSRFFVLRHVSPWRKSCRSLRIRLPSSSRT 60
           MQAV+LN  +      P +  +      ++ + FF  R     R  C SLRIRLP +SR 
Sbjct: 1   MQAVVLNTQSRCRGLEPPSSSTSQKGWQWQRTSFFGRRGNLARRTLCSSLRIRLPHTSRR 60

Query: 61  RFIRAVATPNSALELPLTVENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKLQGACGS 120
             +RAVATPN A+ELPLT ENVESVLDE+RPYLIADGGNVALHEIDGNVVRLKLQGACGS
Sbjct: 61  HVLRAVATPNPAVELPLTAENVESVLDEIRPYLIADGGNVALHEIDGNVVRLKLQGACGS 120

Query: 121 CPSSVTTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEENIEKVLEEIRPYLVGAAGG 180
           CPSSV TMKMGIERRLMEKIPEI AVEPIADEETGLELNEENIEKVLEEIRPYLVGAA G
Sbjct: 121 CPSSVMTMKMGIERRLMEKIPEIFAVEPIADEETGLELNEENIEKVLEEIRPYLVGAADG 180

Query: 181 SLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLLS 229
           SLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLLS
Sbjct: 181 SLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLLS 228

The following BLAST results are available for this feature:

BLAST of Cucsa.076090 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NIFU2_ARATH	8.4e-77	66.09	NifU-like protein 2, chloroplastic OS=Arabidopsis thaliana GN=NIFU2 PE=1 SV=1	[more]
NIFU1_ORYSJ	5.3e-63	61.71	NifU-like protein 1, chloroplastic OS=Oryza sativa subsp. japonica GN=NIFU1 PE=1...	[more]
NIFU3_ARATH	7.4e-57	75.97	NifU-like protein 3, chloroplastic OS=Arabidopsis thaliana GN=NIFU3 PE=2 SV=1	[more]
NIFU1_ARATH	5.9e-22	41.50	NifU-like protein 1, chloroplastic OS=Arabidopsis thaliana GN=NIFU1 PE=1 SV=1	[more]
YUTI_BACSU	8.2e-16	52.86	Putative nitrogen fixation protein YutI OS=Bacillus subtilis (strain 168) GN=yut...	[more]

BLAST of Cucsa.076090 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KRX2_CUCSA	8.6e-121	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G586560 PE=4 SV=1	[more]
A0A067LEA0_JATCU	2.7e-90	80.77	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00216 PE=4 SV=1	[more]
W9QYF8_9ROSA	3.3e-88	79.22	NifU-like protein 2 OS=Morus notabilis GN=L484_018448 PE=4 SV=1	[more]
D7TGV2_VITVI	8.1e-87	78.95	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0035g00770 PE=4 SV=...	[more]
B9SSN2_RICCO	8.1e-87	79.48	Nitrogen fixation protein nifU, putative OS=Ricinus communis GN=RCOM_1374380 PE=...	[more]

BLAST of Cucsa.076090 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G49940.1	4.7e-78	66.09	NIFU-like protein 2	[more]
AT4G25910.1	4.2e-58	75.97	NFU domain protein 3	[more]
AT4G01940.1	3.3e-23	41.50	NFU domain protein 1	[more]
AT3G20970.1	1.0e-08	36.96	NFU domain protein 4	[more]
AT1G51390.1	1.8e-08	37.97	NFU domain protein 5	[more]

BLAST of Cucsa.076090 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449435134\|ref\|XP_004135350.1\|	1.2e-120	100.00	PREDICTED: nifU-like protein 2, chloroplastic [Cucumis sativus]	[more]
gi\|659090369\|ref\|XP_008445979.1\|	6.6e-114	95.18	PREDICTED: nifU-like protein 2, chloroplastic [Cucumis melo]	[more]
gi\|802562967\|ref\|XP_012066647.1\|	3.9e-90	80.77	PREDICTED: nifU-like protein 2, chloroplastic [Jatropha curcas]	[more]
gi\|703065335\|ref\|XP_010087421.1\|	4.7e-88	79.22	NifU-like protein 2 [Morus notabilis]	[more]
gi\|1021507883\|ref\|XP_016197280.1\|	1.8e-87	78.51	PREDICTED: nifU-like protein 2, chloroplastic [Arachis ipaensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001075	NIF_FeS_clus_asmbl_NifU_C
IPR001075	NIF_FeS_clus_asmbl_NifU_C

Vocabulary: **Molecular Function**
Term	Definition
GO:0005506	iron ion binding
GO:0051536	iron-sulfur cluster binding
GO:0005506	iron ion binding
GO:0051536	iron-sulfur cluster binding

Vocabulary: **Biological Process**
Term	Definition
GO:0016226	iron-sulfur cluster assembly
GO:0016226	iron-sulfur cluster assembly

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0016226	iron-sulfur cluster assembly
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0051536	iron-sulfur cluster binding
molecular_function	GO:0005198	structural molecule activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.076090.2	Cucsa.076090.2	mRNA
Cucsa.076090.1	Cucsa.076090.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001075	NIF system FeS cluster assembly, NifU, C-terminal	PRODOM	PD002830		coord: 150..211 score: 4.0E-22coord: 69..133 score: 4.0
IPR001075	NIF system FeS cluster assembly, NifU, C-terminal	PFAM	PF01106	NifU	coord: 146..208 score: 3.0E-13coord: 65..130 score: 1.8
None	No IPR available	PANTHER	PTHR31942	FAMILY NOT NAMED	coord: 45..211 score: 1.4E
None	No IPR available	PANTHER	PTHR31942:SF30	SUBFAMILY NOT NAMED	coord: 45..211 score: 1.4E
None	No IPR available	unknown	SSF117916	Fe-S cluster assembly (FSCA) domain-like	coord: 61..136 score: 9.59E-25coord: 140..209 score: 1.87

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.076090	Cla022934	Watermelon (97103) v1	cgywmB080
Cucsa.076090	Csa5G586560	Cucumber (Chinese Long) v2	cgycuB073
Cucsa.076090	MELO3C011825	Melon (DHL92) v3.5.1	cgymeB077
Cucsa.076090	ClCG11G013330	Watermelon (Charleston Gray)	cgywcgB076
Cucsa.076090	CSPI05G21030	Wild cucumber (PI 183967)	cgycpiB076
Cucsa.076090	CmaCh18G006740	Cucurbita maxima (Rimu)	cgycmaB0125
Cucsa.076090	CmaCh04G018600	Cucurbita maxima (Rimu)	cgycmaB0126
Cucsa.076090	CmoCh04G019580	Cucurbita moschata (Rifu)	cgycmoB0123
Cucsa.076090	CmoCh18G006490	Cucurbita moschata (Rifu)	cgycmoB0120
Cucsa.076090	Lsi04G007130	Bottle gourd (USVL1VR-Ls)	cgylsiB076
Cucsa.076090	Cp4.1LG09g05700	Cucurbita pepo (Zucchini)	cgycpeB0120
Cucsa.076090	Cp4.1LG01g16440	Cucurbita pepo (Zucchini)	cgycpeB0123
Cucsa.076090	MELO3C011825.2	Melon (DHL92) v3.6.1	cgymedB076
Cucsa.076090	CsaV3_5G029830	Cucumber (Chinese Long) v3	cgycucB076
Cucsa.076090	Cla97C11G219240	Watermelon (97103) v2	cgywmbB072
Cucsa.076090	BhiUN887G6	Wax gourd	cgywgoB084
Cucsa.076090	Carg24421	Silver-seed gourd	carcgyB0166
Cucsa.076090	Carg21207	Silver-seed gourd	carcgyB0772

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.076090	Cucurbita maxima (Rimu)	cgycmaB0127
Cucsa.076090	Wild cucumber (PI 183967)	cgycpiB074
Cucsa.076090	Cucurbita pepo (Zucchini)	cgycpeB0121
Cucsa.076090	Cucumber (Chinese Long) v3	cgycucB077