CmaCh04G018600 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh04G018600
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Iron-sulfur cluster assembly protein
Location	Cma_Chr04 : 9451486 .. 9454070 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGCTGGGGCTTCTAAGTTTCTGAATCGCTCCATCGAATCTCATATCCTTTGTCGGACGAAGACGAAGGAACAGCGATTGAATTGAATATGCATCCCATGGTGTTGAATTCCTCCCCTTACCACAGAGCCCCGCAAACCCTTCAATCTCCTTCTTCCTCTTCTTCTTCTTTTTCTTCTCGCGCCTTCAAGGTCCCTTTCCTTTCCCTCTTTTACTCCTCCGTTTTCTGTTCCTCCTAACCAAATTGACAAGTTCAGATCTGGAATATCTTGTAGATCTCCTCCTTCTTCGTCCGCCATGTTTCGCCTTCAAGACAGCGCAGTCTTCTTTGCCGGAGATCATGTCGTTCCCTTCGAATTAACTCACGCACGCCAGGTACTATTTCTGCGTTCCTTCTATTGAATTTGTGTTGGATTCGTATTAAGTTCTGGTTGTTGAATCTATCCGATGTTTTTGTTTTGTAAATTGCTCGCTCTTAGGGTAGATATGCGATTGGTTATCGTAGATGTTAGAACGAAGCTCCTGCCCAATCCTCTTTCTTCTGAGATTGACAATCTTTGTCGTATGATTCAAAATTTTCTGTTTTCAGTTATTAGAGCCGTCGCAACTTCCAATTCGGCACTGGAATTGCCGCTGACTGCAGAAAATGTTGAAAGTGTTCTGGACGAGGTTCGACCATATCTTATTGCGGATGGTGGTAATGTAGCATTACATGAAATAGACGGAAATGTTGTACGGTTGAAGCTACAAGGAGCATGCGGCTCATGTCCGAGTTCTGTTACGACTATGAAGATGGGAATTGAACGGCGTTTGATGGAGAAGATCCCTGAAATAGTTGCTGTGGAACCAATAGCAGATGAGGAAACTGGATTGGAGCTCAACGAGGACAATATAGAGAAGGTAAATCACTGTTCACTCTCTATCACGCGTATTCATTCTATGATTTGGATGCAACTTAAAATTCGTTTCTGAATCGTATATTTGCCTTACACCAACCCACTTGTAATCTCTAACCTATAGACGACTTATAATGGACCTTTCAAGGTATTTGAACATTTTTTGGGAGGAAGAAGCACAATGGTATGTATAGCTCACACAGGTTCTTTGATATATTTGATTATTGAGAAATTAAGGGTAGGATTAAGCTAGCATTCTTTGATGTATGTGATTATTGAGAAATTATGGGTAGGATTAAGCTAGCATTCTTTGATATATGTGATTATTTTGAAATTAAGGGTAGGATTAAGCTAGCATTCTTTTTATTCAACTTCAACAATTCTTCAGATTGGCTTCGTTTTTTGATAAGATATTACCCATTTAGTAGGTCAAGCCTCTGTCTCCGTAGTTTTTTTGGTACTTCAGCCTTCCATTTCTCATTTCTCTGTGACCGAAGGAACGAATGGGTTTCTGAAATCATCCTTATTCGGATAAGGACTGCCAAGAAAGCATATGGCATGATTACATCTTCATTTCGTTCTTCATAGAAATATCAATTAAGTGCATCCAAGGCCCGTGTGTCCGATTTTTTAATCCGGGTGCTACTCTACTTGGTATTGGTCCAAAACTGCGACCAGCTTGATTAAGCTTGCAGCATTTGTAGACAATGAACCTGATAGTAATGCAACACAACGCTTGAATTTGCCTGTCATCATATGAAACCCAAGGGGCTGTATATCGAATCGTACTGGTAGGTTATCTTTGAAATACTTATTACTCCCCATATAAGAAATGCTCTATTCTTTTTTTTTTTTTTTTTCATACTGACTTGTCATGTGATAGATTTCCTAGCCTGTCTCATCCTTGCCTCCAAGTTGGTTGGTTATTCGTTGTCACCTGGATGGGTTGTAGTTCCATCGTTATTATTATCTATTCAATCTTGATGGAGATTCCAATGCCTCTTTCAACCTTATGAAAAATTGGAAACAGAAACTCACTCTTGTTTGTACAATTATGATTGAATGTTATTATTGCTTATTTTTTCCAGTGAATTCAGAAGCCGAGTTTTTTTTGTGCCCCTTTCTTAGGTACTCGAAGAGATAAGACCTTATCTTATCGGGGCAGCGGGAGGATCTCTCGAACTCGTGGGTATCGAGGAGCCAATAGTTAAAGTTCGGATCACAGGGCCAGCAGCTGGGGTCATGACAGTGCGTGTGGCTGTTACACAAAAATTGCGAGAGAAGATACCATCCATAGCCGCAGTTCAACTTTTGTCATAATGAATCTACAGAATACGAGGAGATGTGAATAATTCTTCATTATTCAATTCGTCACATAAGAATAGAAACTCGTAGAATTTGTGTATCATGGTTGCCTCGAGGTATCCTGGTTGTTATTGGCGCTGTATTTATGTAAAATGTAGCCTCATGAACAATTTTTTAGATTATTCCGTACAATTTGCTTTCATAAGGGCACAAATAATCTGAAAAAATTGTAAATCTCATTTCTTTACAATATGGATTACAACGAGTGGACTAGCTTGTGTTTATGTATATAATCCTTAAATTGTGAATAGTTAAGACCCAAGAATAGACCTAATTTGGTGCTTCGTTCAAACTTTTCCTACTCCTTTATAGTACAAGTACGAAG

mRNA sequence

CAGCTGGGGCTTCTAAGTTTCTGAATCGCTCCATCGAATCTCATATCCTTTGTCGGACGAAGACGAAGGAACAGCGATTGAATTGAATATGCATCCCATGGTGTTGAATTCCTCCCCTTACCACAGAGCCCCGCAAACCCTTCAATCTCCTTCTTCCTCTTCTTCTTCTTTTTCTTCTCGCGCCTTCAAGATCTCCTCCTTCTTCGTCCGCCATGTTTCGCCTTCAAGACAGCGCAGTCTTCTTTGCCGGAGATCATGTCGTTCCCTTCGAATTAACTCACGCACGCCAGTTATTAGAGCCGTCGCAACTTCCAATTCGGCACTGGAATTGCCGCTGACTGCAGAAAATGTTGAAAGTGTTCTGGACGAGGTTCGACCATATCTTATTGCGGATGGTGGTAATGTAGCATTACATGAAATAGACGGAAATGTTGTACGGTTGAAGCTACAAGGAGCATGCGGCTCATGTCCGAGTTCTGTTACGACTATGAAGATGGGAATTGAACGGCGTTTGATGGAGAAGATCCCTGAAATAGTTGCTGTGGAACCAATAGCAGATGAGGAAACTGGATTGGAGCTCAACGAGGACAATATAGAGAAGGTACTCGAAGAGATAAGACCTTATCTTATCGGGGCAGCGGGAGGATCTCTCGAACTCGTGGGTATCGAGGAGCCAATAGTTAAAGTTCGGATCACAGGGCCAGCAGCTGGGGTCATGACAGTGCGTGTGGCTGTTACACAAAAATTGCGAGAGAAGATACCATCCATAGCCGCAGTTCAACTTTTGTCATAATGAATCTACAGAATACGAGGAGATGTGAATAATTCTTCATTATTCAATTCGTCACATAAGAATAGAAACTCGTAGAATTTGTGTATCATGGTTGCCTCGAGGTATCCTGGTTGTTATTGGCGCTGTATTTATGTAAAATGTAGCCTCATGAACAATTTTTTAGATTATTCCGTACAATTTGCTTTCATAAGGGCACAAATAATCTGAAAAAATTGTAAATCTCATTTCTTTACAATATGGATTACAACGAGTGGACTAGCTTGTGTTTATGTATATAATCCTTAAATTGTGAATAGTTAAGACCCAAGAATAGACCTAATTTGGTGCTTCGTTCAAACTTTTCCTACTCCTTTATAGTACAAGTACGAAG

Coding sequence (CDS)

ATGCATCCCATGGTGTTGAATTCCTCCCCTTACCACAGAGCCCCGCAAACCCTTCAATCTCCTTCTTCCTCTTCTTCTTCTTTTTCTTCTCGCGCCTTCAAGATCTCCTCCTTCTTCGTCCGCCATGTTTCGCCTTCAAGACAGCGCAGTCTTCTTTGCCGGAGATCATGTCGTTCCCTTCGAATTAACTCACGCACGCCAGTTATTAGAGCCGTCGCAACTTCCAATTCGGCACTGGAATTGCCGCTGACTGCAGAAAATGTTGAAAGTGTTCTGGACGAGGTTCGACCATATCTTATTGCGGATGGTGGTAATGTAGCATTACATGAAATAGACGGAAATGTTGTACGGTTGAAGCTACAAGGAGCATGCGGCTCATGTCCGAGTTCTGTTACGACTATGAAGATGGGAATTGAACGGCGTTTGATGGAGAAGATCCCTGAAATAGTTGCTGTGGAACCAATAGCAGATGAGGAAACTGGATTGGAGCTCAACGAGGACAATATAGAGAAGGTACTCGAAGAGATAAGACCTTATCTTATCGGGGCAGCGGGAGGATCTCTCGAACTCGTGGGTATCGAGGAGCCAATAGTTAAAGTTCGGATCACAGGGCCAGCAGCTGGGGTCATGACAGTGCGTGTGGCTGTTACACAAAAATTGCGAGAGAAGATACCATCCATAGCCGCAGTTCAACTTTTGTCATAA

Protein sequence

MHPMVLNSSPYHRAPQTLQSPSSSSSSFSSRAFKISSFFVRHVSPSRQRSLLCRRSCRSLRINSRTPVIRAVATSNSALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKLQGACGSCPSSVTTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEDNIEKVLEEIRPYLIGAAGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLLS

Homology

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BLAST of CmaCh04G018600 vs. Swiss-Prot
Match: NIFU2_ARATH (NifU-like protein 2, chloroplastic OS=Arabidopsis thaliana GN=NIFU2 PE=1 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 7.5e-73
Identity = 159/238 (66.81%), Postives = 182/238 (76.47%), Query Frame = 1


Query: 1   MHPMVLNSSPYHRAPQTLQSPSSSSSSFSSRAFKISS-----FFVRHVSPSRQRSLLCRR 60
           M  + LN +   R P     PSSSSS        +SS        R  +P R+      R
Sbjct: 1   MQLLTLNPAAISRTPPQAIDPSSSSSLLLPFPQILSSQRALGLVARPCNPLRRG---LSR 60

Query: 61  SCRSLRINSRTPVIRAVATSNSALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNV 120
              S ++  R+ V++AVAT +  LE+PLT ENVESVLDE+RPYL++DGGNVALHEIDGN+
Sbjct: 61  FLSSRQLFRRSKVVKAVATPDPILEVPLTEENVESVLDEIRPYLMSDGGNVALHEIDGNI 120

Query: 121 VRLKLQGACGSCPSSVTTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEDNIEKVLEE 180
           VR+KLQGACGSCPSS  TMKMGIERRLMEKIPEIVAVE + DEETGLELNE+NIEKVLEE
Sbjct: 121 VRVKLQGACGSCPSSTMTMKMGIERRLMEKIPEIVAVEALPDEETGLELNEENIEKVLEE 180

Query: 181 IRPYLIGAAGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLL 234
           IRPYLIG A GSL+LV IE+PIVK+RITGPAAGVMTVRVAVTQKLREKIPSIAAVQL+
Sbjct: 181 IRPYLIGTADGSLDLVEIEDPIVKIRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLI 235

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BLAST of CmaCh04G018600 vs. Swiss-Prot
Match: NIFU1_ORYSJ (NifU-like protein 1, chloroplastic OS=Oryza sativa subsp. japonica GN=NIFU1 PE=1 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 4.3e-60
Identity = 136/232 (58.62%), Postives = 166/232 (71.55%), Query Frame = 1


Query: 20  SPSSSSSSFSSRAFKISSFFVRHVSPSRQRSLLCRRSCRSLRINSRTPVIRAVATSN--- 79
           +PS+++SS  S +FK++++                 SCRS    S +P  R VA  N   
Sbjct: 15  APSTTTSS--SASFKVAAY--------------AWSSCRS----SSSPATRLVAAPNHQR 74

Query: 80  --------------SALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKLQG 139
                         +A++LPLTA NVESVLD+VRPYL ADGG+VALHEI GNVVRLKLQG
Sbjct: 75  PPLVVGAIAGLDPVTAVQLPLTAGNVESVLDQVRPYLTADGGDVALHEIAGNVVRLKLQG 134

Query: 140 ACGSCPSSVTTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEDNIEKVLEEIRPYLIG 199
           ACGSCPSS+ T+K GIERRLMEKIP++ AVEP+ D+ETGLELNE+N+EKVL EIRPYL G
Sbjct: 135 ACGSCPSSLITIKRGIERRLMEKIPDVAAVEPVTDKETGLELNEENVEKVLNEIRPYLAG 194

Query: 200 AAGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLLS 235
             GG L+ + I+ PIVKVR+TGPAA V TVR+AV++KLREKIPSI  VQLLS
Sbjct: 195 TGGGGLQFLMIKGPIVKVRLTGPAAVVRTVRIAVSKKLREKIPSIQIVQLLS 226

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BLAST of CmaCh04G018600 vs. Swiss-Prot
Match: NIFU3_ARATH (NifU-like protein 3, chloroplastic OS=Arabidopsis thaliana GN=NIFU3 PE=2 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 9.2e-55
Identity = 128/214 (59.81%), Postives = 150/214 (70.09%), Query Frame = 1


Query: 22  SSSSSSFSSRAFKISSF-FVRHVSPSRQRSLLCRRSCRSLRINSRTPVIRAVATSNSALE 81
           SS  S+F    F+   F +++H  P R+R++    SC                       
Sbjct: 44  SSKCSTFLRGQFQRIHFSWLQHTRPLRKRTVFGHVSC----------------------V 103

Query: 82  LPLTAENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKLQGACGSCPSSVTTMKMGIER 141
           +PLT ENVE VLDEVRP L+ADGGNVALHEIDG VV LKLQGACGSCPSS  T+KMGIE 
Sbjct: 104 MPLTEENVERVLDEVRPSLMADGGNVALHEIDGLVVVLKLQGACGSCPSSSMTLKMGIES 163

Query: 142 RLMEKIPEIVAVEPIADEET-GLELNEDNIEKVLEEIRPYLIGAAGGSLELVGIEEPIVK 201
           RL +KIPEI++VE   + ET GLELN++NIEKVL E+RPYL G  GG LELV I+  +VK
Sbjct: 164 RLRDKIPEIMSVEQFLESETGGLELNDENIEKVLSELRPYLSGTGGGGLELVEIDGYVVK 223

Query: 202 VRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLL 234
           VR+TGPAAGVMTVRVA+TQKLRE IPSI AVQLL
Sbjct: 224 VRLTGPAAGVMTVRVALTQKLRETIPSIGAVQLL 235

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BLAST of CmaCh04G018600 vs. Swiss-Prot
Match: NIFU1_ARATH (NifU-like protein 1, chloroplastic OS=Arabidopsis thaliana GN=NIFU1 PE=1 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 6.7e-21
Identity = 61/147 (41.50%), Postives = 92/147 (62.59%), Query Frame = 1


Query: 77  SALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKLQGACGSCPSSVTTMKM 136
           SA    LT +NV+ VL++VRP+LI+DGGNV +  ++  VV LKLQGAC SCPSS TTM M
Sbjct: 79  SAQTFDLTPQNVDLVLEDVRPFLISDGGNVDVVSVEDGVVSLKLQGACTSCPSSSTTMTM 138

Query: 137 GIERRLMEKIPEIVA-VEPIADEETGLELNEDNIEKVLEEIRPYLIGAAGGSLELVGIEE 196
           GIER L EK  + +  +  + DEE   ++  + +   L+ +RP  I   GGS+E++ +E 
Sbjct: 139 GIERVLKEKFGDALKDIRQVFDEEV-KQITVEAVNAHLDILRP-AIKNYGGSVEVLSVEG 198

Query: 197 PIVKVRITGPAAGVMTVRVAVTQKLRE 223
               V+  GP +  M ++ A+ +K ++
Sbjct: 199 EDCVVKYVGPESIGMGIQAAIKEKFKD 223

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BLAST of CmaCh04G018600 vs. Swiss-Prot
Match: YUTI_BACSU (Putative nitrogen fixation protein YutI OS=Bacillus subtilis (strain 168) GN=yutI PE=3 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 8.4e-16
Identity = 37/70 (52.86%), Postives = 54/70 (77.14%), Query Frame = 1


Query: 86  ENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKLQGACGSCPSSVTTMKMGIERRLMEK 145
           E V+ VLD++RP+L+ DGG+  L ++D  +V+L+L GACGSCPSS  T+K GIER L+E+
Sbjct: 41  EQVQEVLDKLRPFLLRDGGDCELVDVDEGIVKLRLLGACGSCPSSTITLKAGIERALLEE 100

Query: 146 IPEIVAVEPI 156
           +P +V VE +
Sbjct: 101 VPGVVEVEQV 110

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BLAST of CmaCh04G018600 vs. TrEMBL
Match: A0A0A0KRX2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G586560 PE=4 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 1.2e-93
Identity = 199/234 (85.04%), Postives = 207/234 (88.46%), Query Frame = 1


Query: 6   LNSSPYHRAPQTLQSPSSSSSSFSSRAFKISSFFV-RHVSPSRQRSLLCRRSCRSLRI-- 65
           LN+SPY R+PQTL+SPS S      R FK+S FFV RHVSP        R+SCRSLRI  
Sbjct: 8   LNTSPYTRSPQTLESPSCS------RNFKVSRFFVLRHVSP-------WRKSCRSLRIRL 67

Query: 66  --NSRTPVIRAVATSNSALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKL 125
             +SRT  IRAVAT NSALELPLT ENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKL
Sbjct: 68  PSSSRTRFIRAVATPNSALELPLTVENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKL 127

Query: 126 QGACGSCPSSVTTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEDNIEKVLEEIRPYL 185
           QGACGSCPSSVTTMKMGIERRLMEKIPEIVAVEPIADEETGLELNE+NIEKVLEEIRPYL
Sbjct: 128 QGACGSCPSSVTTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEENIEKVLEEIRPYL 187

Query: 186 IGAAGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLLS 235
           +GAAGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLLS
Sbjct: 188 VGAAGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLLS 228

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BLAST of CmaCh04G018600 vs. TrEMBL
Match: A0A067LEA0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00216 PE=4 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 4.1e-86
Identity = 189/237 (79.75%), Postives = 198/237 (83.54%), Query Frame = 1


Query: 1   MHPMVLNSSPYHRAPQTLQSPSSSSSSFSSRAFKISSFFVRHVSPSRQRSLLCRRSCRSL 60
           M  +VLN   Y RA QT  SPSSS        FK SS F   VS  R+R+ L R  CRSL
Sbjct: 1   MQAVVLNPI-YCRAQQTPDSPSSS------HPFKSSSLFATQVSLKRERNQLRRIPCRSL 60

Query: 61  RIN----SRTPVIRAVATSNSALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNVV 120
           RI     +R  V+RAVAT  SALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNVV
Sbjct: 61  RIRLPAFNRRLVLRAVATPESALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNVV 120

Query: 121 RLKLQGACGSCPSSVTTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEDNIEKVLEEI 180
           RLKLQGACGSCPSSV TMKMGIERRLMEKIPEIVAVEP+ADEETGLELNE+NIEKVLEEI
Sbjct: 121 RLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVEPVADEETGLELNEENIEKVLEEI 180

Query: 181 RPYLIGAAGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLL 234
           RPYL+GAAGGSLELV IEEPIVKVRITGPAAGVMTVRVAVTQKLREKIP+IAAVQLL
Sbjct: 181 RPYLVGAAGGSLELVAIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 230

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BLAST of CmaCh04G018600 vs. TrEMBL
Match: B9SSN2_RICCO (Nitrogen fixation protein nifU, putative OS=Ricinus communis GN=RCOM_1374380 PE=4 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 1.2e-85
Identity = 186/233 (79.83%), Postives = 198/233 (84.98%), Query Frame = 1


Query: 1   MHPMVLNSSPYHRAPQTLQSPSSSSSSFSSRAFKISSFFVRHVSPSRQRSLLCRRSCRSL 60
           M  +V+N + Y R  QTL S  SSS     R FK SS F   VS +R R+ L R  CRS+
Sbjct: 1   MQAVVINPT-YSRPHQTLDSAPSSS-----RPFKSSSLFSARVSLNRGRNHLRRIPCRSV 60

Query: 61  RINSRTPVIRAVATSNSALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKL 120
           R+  R  V+RAVAT NSALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKL
Sbjct: 61  RLTRRL-VVRAVATPNSALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKL 120

Query: 121 QGACGSCPSSVTTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEDNIEKVLEEIRPYL 180
           QGACGSCPSSV TMKMGIERRLMEKIPEIVAVEPIADEETGLELNE+NIEKVLEEIRPYL
Sbjct: 121 QGACGSCPSSVMTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEENIEKVLEEIRPYL 180

Query: 181 IGAAGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLL 234
           +GAAGGSLELV IEEPI K+RITGPAAGVMTVRVAVTQKLREKIP+IAAVQLL
Sbjct: 181 VGAAGGSLELVAIEEPIAKIRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 226

[Close]

BLAST of CmaCh04G018600 vs. TrEMBL
Match: W9QYF8_9ROSA (NifU-like protein 2 OS=Morus notabilis GN=L484_018448 PE=4 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 2.1e-82
Identity = 180/243 (74.07%), Postives = 191/243 (78.60%), Query Frame = 1


Query: 1   MHPMVLNSSPYHRAPQTLQSPS---------SSSSSFSSRAFKISSFFVRHVSPSRQRSL 60
           M  +VLNS PY RA QTLQ PS         S+ +SF    F +   F+R   PS  R L
Sbjct: 1   MQAVVLNSRPYCRAQQTLQPPSVSKNWSSLGSTHASFRRGHFPVRRCFIRIRLPSASRGL 60

Query: 61  LCRRSCRSLRINSRTPVIRAVATSNSALELPLTAENVESVLDEVRPYLIADGGNVALHEI 120
                           V++AVAT N ALELPLTAENVESVLDE+RPYLIADGGNVALHEI
Sbjct: 61  ----------------VVKAVATPNPALELPLTAENVESVLDEIRPYLIADGGNVALHEI 120

Query: 121 DGNVVRLKLQGACGSCPSSVTTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEDNIEK 180
           DGNVVRLKLQGACGSCPSSV TMKMGIERRLME IPEIVAVEPIADEE GLELNE+NIEK
Sbjct: 121 DGNVVRLKLQGACGSCPSSVVTMKMGIERRLMENIPEIVAVEPIADEEMGLELNEENIEK 180

Query: 181 VLEEIRPYLIGAAGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPSIAAVQ 235
           VLEEIRPYL+GAAGGSLELV IEEPIVKVRITGPAAGVMTVRVAVTQKLREKIP+IAAVQ
Sbjct: 181 VLEEIRPYLVGAAGGSLELVAIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQ 227

[Close]

BLAST of CmaCh04G018600 vs. TrEMBL
Match: A0A067DYA7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g026830mg PE=4 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 2.8e-82
Identity = 180/237 (75.95%), Postives = 197/237 (83.12%), Query Frame = 1


Query: 1   MHPMVLNSSPYHRAPQTLQSPSSSSSSFSSRAFKISSFFVRHVSPSRQRSLLCRRSCRSL 60
           M  +VLN S Y R  QTL SPS S  +  S      SFF   VS +R R+ +C  SCR L
Sbjct: 1   MQGVVLNPS-YSRPHQTLDSPSCSRPASKST----KSFFGERVSLTRWRNPVCHSSCRLL 60

Query: 61  RIN----SRTPVIRAVATSNSALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNVV 120
            I     +R  VI+AVAT +SA+ELPLTAEN+ESVLDE+RPYLI+DGGNVALHEIDGNVV
Sbjct: 61  LIRKRGAARRNVIKAVATPDSAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVV 120

Query: 121 RLKLQGACGSCPSSVTTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEDNIEKVLEEI 180
           RLKLQGACGSCPSSV TMKMGIERRLMEKIPEIVAVE +ADEETGLELNE+NIEKVLEEI
Sbjct: 121 RLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLELNEENIEKVLEEI 180

Query: 181 RPYLIGAAGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLL 234
           RPYL+GAAGGSLELV I+EPIVKVRITGPAAGVMTVRVAVTQKLREKIP+IAAVQLL
Sbjct: 181 RPYLVGAAGGSLELVTIDEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232

[Close]

BLAST of CmaCh04G018600 vs. TAIR10
Match: AT5G49940.1 (AT5G49940.1 NIFU-like protein 2)

HSP 1 Score: 275.0 bits (702), Expect = 4.2e-74
Identity = 159/238 (66.81%), Postives = 182/238 (76.47%), Query Frame = 1


Query: 1   MHPMVLNSSPYHRAPQTLQSPSSSSSSFSSRAFKISS-----FFVRHVSPSRQRSLLCRR 60
           M  + LN +   R P     PSSSSS        +SS        R  +P R+      R
Sbjct: 1   MQLLTLNPAAISRTPPQAIDPSSSSSLLLPFPQILSSQRALGLVARPCNPLRRG---LSR 60

Query: 61  SCRSLRINSRTPVIRAVATSNSALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNV 120
              S ++  R+ V++AVAT +  LE+PLT ENVESVLDE+RPYL++DGGNVALHEIDGN+
Sbjct: 61  FLSSRQLFRRSKVVKAVATPDPILEVPLTEENVESVLDEIRPYLMSDGGNVALHEIDGNI 120

Query: 121 VRLKLQGACGSCPSSVTTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEDNIEKVLEE 180
           VR+KLQGACGSCPSS  TMKMGIERRLMEKIPEIVAVE + DEETGLELNE+NIEKVLEE
Sbjct: 121 VRVKLQGACGSCPSSTMTMKMGIERRLMEKIPEIVAVEALPDEETGLELNEENIEKVLEE 180

Query: 181 IRPYLIGAAGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLL 234
           IRPYLIG A GSL+LV IE+PIVK+RITGPAAGVMTVRVAVTQKLREKIPSIAAVQL+
Sbjct: 181 IRPYLIGTADGSLDLVEIEDPIVKIRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLI 235

[Close]

BLAST of CmaCh04G018600 vs. TAIR10
Match: AT4G25910.1 (AT4G25910.1 NFU domain protein 3)

HSP 1 Score: 214.9 bits (546), Expect = 5.2e-56
Identity = 128/214 (59.81%), Postives = 150/214 (70.09%), Query Frame = 1


Query: 22  SSSSSSFSSRAFKISSF-FVRHVSPSRQRSLLCRRSCRSLRINSRTPVIRAVATSNSALE 81
           SS  S+F    F+   F +++H  P R+R++    SC                       
Sbjct: 44  SSKCSTFLRGQFQRIHFSWLQHTRPLRKRTVFGHVSC----------------------V 103

Query: 82  LPLTAENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKLQGACGSCPSSVTTMKMGIER 141
           +PLT ENVE VLDEVRP L+ADGGNVALHEIDG VV LKLQGACGSCPSS  T+KMGIE 
Sbjct: 104 MPLTEENVERVLDEVRPSLMADGGNVALHEIDGLVVVLKLQGACGSCPSSSMTLKMGIES 163

Query: 142 RLMEKIPEIVAVEPIADEET-GLELNEDNIEKVLEEIRPYLIGAAGGSLELVGIEEPIVK 201
           RL +KIPEI++VE   + ET GLELN++NIEKVL E+RPYL G  GG LELV I+  +VK
Sbjct: 164 RLRDKIPEIMSVEQFLESETGGLELNDENIEKVLSELRPYLSGTGGGGLELVEIDGYVVK 223

Query: 202 VRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLL 234
           VR+TGPAAGVMTVRVA+TQKLRE IPSI AVQLL
Sbjct: 224 VRLTGPAAGVMTVRVALTQKLRETIPSIGAVQLL 235

[Close]

BLAST of CmaCh04G018600 vs. TAIR10
Match: AT4G01940.1 (AT4G01940.1 NFU domain protein 1)

HSP 1 Score: 102.4 bits (254), Expect = 3.8e-22
Identity = 61/147 (41.50%), Postives = 92/147 (62.59%), Query Frame = 1


Query: 77  SALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKLQGACGSCPSSVTTMKM 136
           SA    LT +NV+ VL++VRP+LI+DGGNV +  ++  VV LKLQGAC SCPSS TTM M
Sbjct: 79  SAQTFDLTPQNVDLVLEDVRPFLISDGGNVDVVSVEDGVVSLKLQGACTSCPSSSTTMTM 138

Query: 137 GIERRLMEKIPEIVA-VEPIADEETGLELNEDNIEKVLEEIRPYLIGAAGGSLELVGIEE 196
           GIER L EK  + +  +  + DEE   ++  + +   L+ +RP  I   GGS+E++ +E 
Sbjct: 139 GIERVLKEKFGDALKDIRQVFDEEV-KQITVEAVNAHLDILRP-AIKNYGGSVEVLSVEG 198

Query: 197 PIVKVRITGPAAGVMTVRVAVTQKLRE 223
               V+  GP +  M ++ A+ +K ++
Sbjct: 199 EDCVVKYVGPESIGMGIQAAIKEKFKD 223

[Close]

BLAST of CmaCh04G018600 vs. TAIR10
Match: AT1G51390.1 (AT1G51390.1 NFU domain protein 5)

HSP 1 Score: 55.1 bits (131), Expect = 6.9e-08
Identity = 29/79 (36.71%), Postives = 46/79 (58.23%), Query Frame = 1


Query: 84  TAENVESVLD-EVRPYLIADGGNVAL--HEIDGNVVRLKLQGACGSCPSSVTTMKMGIER 143
           T   ++ +L+  +RP +  DGG++     + +  +V+L++QGAC  CPSS  T+K GIE 
Sbjct: 187 TVAMIKELLETRIRPSVQDDGGDIEYCGFDTETGIVKLRMQGACSGCPSSSVTLKSGIEN 246

Query: 144 RLMEKIPEIVAVEPIADEE 160
            LM  + E+  VE   D E
Sbjct: 247 MLMHYVSEVKGVEQEFDGE 265

[Close]

BLAST of CmaCh04G018600 vs. TAIR10
Match: AT3G20970.1 (AT3G20970.1 NFU domain protein 4)

HSP 1 Score: 53.9 bits (128), Expect = 1.5e-07
Identity = 36/107 (33.64%), Postives = 56/107 (52.34%), Query Frame = 1


Query: 56  SCRSLRINSRTPVIRAVATSNSALELPLTAENVESVLD-EVRPYLIADGGNVALHEID-- 115
           S + L ++S+    +  A S    E   T   ++ +L+  +RP +  DGG++     D  
Sbjct: 167 SGQPLFLDSQAAAAKDTAISEDDSE---TVAMIKELLETRIRPAVQDDGGDIEYCGFDPE 226

Query: 116 GNVVRLKLQGACGSCPSSVTTMKMGIERRLMEKIPEIVAVEPIADEE 160
             +V+L++QGAC  CPSS  T+K GIE  LM  + E+  VE   D E
Sbjct: 227 SGIVKLRMQGACSGCPSSSVTLKSGIENMLMHYVSEVKGVEQEFDGE 270

[Close]

BLAST of CmaCh04G018600 vs. NCBI nr
Match: gi|659090369|ref|XP_008445979.1| (PREDICTED: nifU-like protein 2, chloroplastic [Cucumis melo])

HSP 1 Score: 354.0 bits (907), Expect = 2.0e-94
Identity = 200/240 (83.33%), Postives = 211/240 (87.92%), Query Frame = 1


Query: 1   MHPMV--LNSSPYHRAPQTLQSPSSSSSSFSSRAFKISSFFVRHVSPSRQRSLLCRRSCR 60
           MH +V  LN+SPY RAPQTL+SPS S      R FK+S FF RHVSP        R+SCR
Sbjct: 1   MHAVVWNLNTSPYTRAPQTLESPSCS------RNFKVSRFFFRHVSP-------WRKSCR 60

Query: 61  SLRI----NSRTPVIRAVATSNSALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGN 120
           SLRI    +SRT +IRAVAT NSALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGN
Sbjct: 61  SLRIRLPSSSRTRLIRAVATPNSALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGN 120

Query: 121 VVRLKLQGACGSCPSSVTTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEDNIEKVLE 180
           +VRLKLQGACGSCPSSVTTMKMGIERRLMEKIPEIVAVEPIAD ETGLELNE+NIEKVLE
Sbjct: 121 IVRLKLQGACGSCPSSVTTMKMGIERRLMEKIPEIVAVEPIADVETGLELNEENIEKVLE 180

Query: 181 EIRPYLIGAAGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLLS 235
           EIRPYL+GAAGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIP+IAAVQLLS
Sbjct: 181 EIRPYLVGAAGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLLS 227

[Close]

BLAST of CmaCh04G018600 vs. NCBI nr
Match: gi|449435134|ref|XP_004135350.1| (PREDICTED: nifU-like protein 2, chloroplastic [Cucumis sativus])

HSP 1 Score: 350.9 bits (899), Expect = 1.7e-93
Identity = 199/234 (85.04%), Postives = 207/234 (88.46%), Query Frame = 1


Query: 6   LNSSPYHRAPQTLQSPSSSSSSFSSRAFKISSFFV-RHVSPSRQRSLLCRRSCRSLRI-- 65
           LN+SPY R+PQTL+SPS S      R FK+S FFV RHVSP        R+SCRSLRI  
Sbjct: 8   LNTSPYTRSPQTLESPSCS------RNFKVSRFFVLRHVSP-------WRKSCRSLRIRL 67

Query: 66  --NSRTPVIRAVATSNSALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKL 125
             +SRT  IRAVAT NSALELPLT ENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKL
Sbjct: 68  PSSSRTRFIRAVATPNSALELPLTVENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKL 127

Query: 126 QGACGSCPSSVTTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEDNIEKVLEEIRPYL 185
           QGACGSCPSSVTTMKMGIERRLMEKIPEIVAVEPIADEETGLELNE+NIEKVLEEIRPYL
Sbjct: 128 QGACGSCPSSVTTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEENIEKVLEEIRPYL 187

Query: 186 IGAAGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLLS 235
           +GAAGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLLS
Sbjct: 188 VGAAGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLLS 228

[Close]

BLAST of CmaCh04G018600 vs. NCBI nr
Match: gi|802562967|ref|XP_012066647.1| (PREDICTED: nifU-like protein 2, chloroplastic [Jatropha curcas])

HSP 1 Score: 325.9 bits (834), Expect = 5.9e-86
Identity = 189/237 (79.75%), Postives = 198/237 (83.54%), Query Frame = 1


Query: 1   MHPMVLNSSPYHRAPQTLQSPSSSSSSFSSRAFKISSFFVRHVSPSRQRSLLCRRSCRSL 60
           M  +VLN   Y RA QT  SPSSS        FK SS F   VS  R+R+ L R  CRSL
Sbjct: 1   MQAVVLNPI-YCRAQQTPDSPSSS------HPFKSSSLFATQVSLKRERNQLRRIPCRSL 60

Query: 61  RIN----SRTPVIRAVATSNSALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNVV 120
           RI     +R  V+RAVAT  SALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNVV
Sbjct: 61  RIRLPAFNRRLVLRAVATPESALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNVV 120

Query: 121 RLKLQGACGSCPSSVTTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEDNIEKVLEEI 180
           RLKLQGACGSCPSSV TMKMGIERRLMEKIPEIVAVEP+ADEETGLELNE+NIEKVLEEI
Sbjct: 121 RLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVEPVADEETGLELNEENIEKVLEEI 180

Query: 181 RPYLIGAAGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLL 234
           RPYL+GAAGGSLELV IEEPIVKVRITGPAAGVMTVRVAVTQKLREKIP+IAAVQLL
Sbjct: 181 RPYLVGAAGGSLELVAIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 230

[Close]

BLAST of CmaCh04G018600 vs. NCBI nr
Match: gi|255576215|ref|XP_002529001.1| (PREDICTED: nifU-like protein 2, chloroplastic [Ricinus communis])

HSP 1 Score: 324.3 bits (830), Expect = 1.7e-85
Identity = 186/233 (79.83%), Postives = 198/233 (84.98%), Query Frame = 1


Query: 1   MHPMVLNSSPYHRAPQTLQSPSSSSSSFSSRAFKISSFFVRHVSPSRQRSLLCRRSCRSL 60
           M  +V+N + Y R  QTL S  SSS     R FK SS F   VS +R R+ L R  CRS+
Sbjct: 1   MQAVVINPT-YSRPHQTLDSAPSSS-----RPFKSSSLFSARVSLNRGRNHLRRIPCRSV 60

Query: 61  RINSRTPVIRAVATSNSALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKL 120
           R+  R  V+RAVAT NSALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKL
Sbjct: 61  RLTRRL-VVRAVATPNSALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKL 120

Query: 121 QGACGSCPSSVTTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEDNIEKVLEEIRPYL 180
           QGACGSCPSSV TMKMGIERRLMEKIPEIVAVEPIADEETGLELNE+NIEKVLEEIRPYL
Sbjct: 121 QGACGSCPSSVMTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEENIEKVLEEIRPYL 180

Query: 181 IGAAGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLL 234
           +GAAGGSLELV IEEPI K+RITGPAAGVMTVRVAVTQKLREKIP+IAAVQLL
Sbjct: 181 VGAAGGSLELVAIEEPIAKIRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 226

[Close]

BLAST of CmaCh04G018600 vs. NCBI nr
Match: gi|703065335|ref|XP_010087421.1| (NifU-like protein 2 [Morus notabilis])

HSP 1 Score: 313.5 bits (802), Expect = 3.0e-82
Identity = 180/243 (74.07%), Postives = 191/243 (78.60%), Query Frame = 1


Query: 1   MHPMVLNSSPYHRAPQTLQSPS---------SSSSSFSSRAFKISSFFVRHVSPSRQRSL 60
           M  +VLNS PY RA QTLQ PS         S+ +SF    F +   F+R   PS  R L
Sbjct: 1   MQAVVLNSRPYCRAQQTLQPPSVSKNWSSLGSTHASFRRGHFPVRRCFIRIRLPSASRGL 60

Query: 61  LCRRSCRSLRINSRTPVIRAVATSNSALELPLTAENVESVLDEVRPYLIADGGNVALHEI 120
                           V++AVAT N ALELPLTAENVESVLDE+RPYLIADGGNVALHEI
Sbjct: 61  ----------------VVKAVATPNPALELPLTAENVESVLDEIRPYLIADGGNVALHEI 120

Query: 121 DGNVVRLKLQGACGSCPSSVTTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEDNIEK 180
           DGNVVRLKLQGACGSCPSSV TMKMGIERRLME IPEIVAVEPIADEE GLELNE+NIEK
Sbjct: 121 DGNVVRLKLQGACGSCPSSVVTMKMGIERRLMENIPEIVAVEPIADEEMGLELNEENIEK 180

Query: 181 VLEEIRPYLIGAAGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPSIAAVQ 235
           VLEEIRPYL+GAAGGSLELV IEEPIVKVRITGPAAGVMTVRVAVTQKLREKIP+IAAVQ
Sbjct: 181 VLEEIRPYLVGAAGGSLELVAIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQ 227

The following BLAST results are available for this feature:

BLAST of CmaCh04G018600 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NIFU2_ARATH	7.5e-73	66.81	NifU-like protein 2, chloroplastic OS=Arabidopsis thaliana GN=NIFU2 PE=1 SV=1	[more]
NIFU1_ORYSJ	4.3e-60	58.62	NifU-like protein 1, chloroplastic OS=Oryza sativa subsp. japonica GN=NIFU1 PE=1...	[more]
NIFU3_ARATH	9.2e-55	59.81	NifU-like protein 3, chloroplastic OS=Arabidopsis thaliana GN=NIFU3 PE=2 SV=1	[more]
NIFU1_ARATH	6.7e-21	41.50	NifU-like protein 1, chloroplastic OS=Arabidopsis thaliana GN=NIFU1 PE=1 SV=1	[more]
YUTI_BACSU	8.4e-16	52.86	Putative nitrogen fixation protein YutI OS=Bacillus subtilis (strain 168) GN=yut...	[more]

BLAST of CmaCh04G018600 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KRX2_CUCSA	1.2e-93	85.04	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G586560 PE=4 SV=1	[more]
A0A067LEA0_JATCU	4.1e-86	79.75	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00216 PE=4 SV=1	[more]
B9SSN2_RICCO	1.2e-85	79.83	Nitrogen fixation protein nifU, putative OS=Ricinus communis GN=RCOM_1374380 PE=...	[more]
W9QYF8_9ROSA	2.1e-82	74.07	NifU-like protein 2 OS=Morus notabilis GN=L484_018448 PE=4 SV=1	[more]
A0A067DYA7_CITSI	2.8e-82	75.95	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g026830mg PE=4 SV=1	[more]

BLAST of CmaCh04G018600 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G49940.1	4.2e-74	66.81	NIFU-like protein 2	[more]
AT4G25910.1	5.2e-56	59.81	NFU domain protein 3	[more]
AT4G01940.1	3.8e-22	41.50	NFU domain protein 1	[more]
AT1G51390.1	6.9e-08	36.71	NFU domain protein 5	[more]
AT3G20970.1	1.5e-07	33.64	NFU domain protein 4	[more]

BLAST of CmaCh04G018600 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659090369\|ref\|XP_008445979.1\|	2.0e-94	83.33	PREDICTED: nifU-like protein 2, chloroplastic [Cucumis melo]	[more]
gi\|449435134\|ref\|XP_004135350.1\|	1.7e-93	85.04	PREDICTED: nifU-like protein 2, chloroplastic [Cucumis sativus]	[more]
gi\|802562967\|ref\|XP_012066647.1\|	5.9e-86	79.75	PREDICTED: nifU-like protein 2, chloroplastic [Jatropha curcas]	[more]
gi\|255576215\|ref\|XP_002529001.1\|	1.7e-85	79.83	PREDICTED: nifU-like protein 2, chloroplastic [Ricinus communis]	[more]
gi\|703065335\|ref\|XP_010087421.1\|	3.0e-82	74.07	NifU-like protein 2 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001075	NIF_FeS_clus_asmbl_NifU_C

Vocabulary: **Molecular Function**
Term	Definition
GO:0005506	iron ion binding
GO:0051536	iron-sulfur cluster binding

Vocabulary: **Biological Process**
Term	Definition
GO:0016226	iron-sulfur cluster assembly

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0016226	iron-sulfur cluster assembly
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0051536	iron-sulfur cluster binding
molecular_function	GO:0005198	structural molecule activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G018600.1	CmaCh04G018600.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001075	NIF system FeS cluster assembly, NifU, C-terminal	PRODOM	PD002830		coord: 92..156 score: 8.0E-31coord: 173..234 score: 6.0
IPR001075	NIF system FeS cluster assembly, NifU, C-terminal	PFAM	PF01106	NifU	coord: 88..153 score: 2.1E-26coord: 169..231 score: 3.5
None	No IPR available	PANTHER	PTHR31942	FAMILY NOT NAMED	coord: 14..234 score: 5.9E
None	No IPR available	unknown	SSF117916	Fe-S cluster assembly (FSCA) domain-like	coord: 85..159 score: 2.07E-24coord: 163..232 score: 3.27

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh04G018600	Cucsa.076090	Cucumber (Gy14) v1	cgycmaB0126
CmaCh04G018600	Cla022934	Watermelon (97103) v1	cmawmB738
CmaCh04G018600	Csa5G586560	Cucumber (Chinese Long) v2	cmacuB749
CmaCh04G018600	MELO3C011825	Melon (DHL92) v3.5.1	cmameB641
CmaCh04G018600	ClCG11G013330	Watermelon (Charleston Gray)	cmawcgB629
CmaCh04G018600	CSPI05G21030	Wild cucumber (PI 183967)	cmacpiB758
CmaCh04G018600	CmoCh04G019580	Cucurbita moschata (Rifu)	cmacmoB728
CmaCh04G018600	CmoCh18G006490	Cucurbita moschata (Rifu)	cmacmoB707
CmaCh04G018600	Lsi04G007130	Bottle gourd (USVL1VR-Ls)	cmalsiB670
CmaCh04G018600	Cp4.1LG09g05700	Cucurbita pepo (Zucchini)	cmacpeB694
CmaCh04G018600	Cp4.1LG01g16440	Cucurbita pepo (Zucchini)	cmacpeB720
CmaCh04G018600	MELO3C011825.2	Melon (DHL92) v3.6.1	cmamedB727
CmaCh04G018600	CsaV3_5G029830	Cucumber (Chinese Long) v3	cmacucB0886
CmaCh04G018600	Cla97C11G219240	Watermelon (97103) v2	cmawmbB735
CmaCh04G018600	BhiUN887G6	Wax gourd	cmawgoB0834
CmaCh04G018600	CsGy5G020570	Cucumber (Gy14) v2	cgybcmaB675
CmaCh04G018600	Carg21207	Silver-seed gourd	carcmaB0971
CmaCh04G018600	Carg24421	Silver-seed gourd	carcmaB0179

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh04G018600	CmaCh18G006740	Cucurbita maxima (Rimu)	cmacmaB404

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh04G018600	Wild cucumber (PI 183967)	cmacpiB745