Cucsa.055990 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.055990
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Damaged dna-binding 2, putative isoform 2
Location	scaffold00602 : 163281 .. 165195 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TACAATTTCTCTTATCAAAATGAAAAGTAGTTCAGGTTAGGTTGGAGCCAGTGTGGACTTTGGTTTTTtCGTTTTAGGTTAGAGACAGTTTTTGTTATTGTTAAAGAAAAGGTTAGAAATTAAAAAGGATAAGAAAAAGGTGAGAGCGGAACATGAAAGGGCGATGGAAGCGCAGGCAGGGGATAAAAGGCTAAAATAATAAAAGAAAAGGAAAAAAaGAGAAAATAATAAAGTGATGAATGGAAGCCCGGCAGATGAGGATAAGGCCTTGGGCTTTCCTTTTCGGAGTTCTTTATCCTTTTCATTAACTCTCTCATCCTAGATGATATTACTCTTCTCTTCTCCTTCATTAATTGTCTACAAATCCATAATTTTCTATATTTAAATTCTTGTCTCTTCTTCTCTACACAATCTCTCCACTCCCATCGATATATCAATGCCAAACTATATTTCTTAATCTCATCTTCATTTTAAAaCTATAATCTTCTTCCTTCTCTATCCCATTTGAATCACTCAATTATGTCAATTGCTCTGGAAACCAATACCGTTTTTtCTCAACCTGGATTGCCCTCTTACTGTTCTGTCTTGAATACCACCGGAATTATTCCGGTTGTTCGGCGAGAGGCGGCTCTTGCTGATGCGGTGGCGCCGGCGGATGTGGATAGATGTACTTCCTCTTCATCGTCCTCGATCGGAGAAAATAGTGGTTTCTCTGTACGATTATCGGATAATGACGATGGAGAGGATAATGAGGCGGAAAGTTCGTATAAAGGACCTCTAGGAATGGAGTCGTTGGAAGAAGTTCTGCCTATCAGGTTAGCGATTTTGATTTTtTTtCTTTCTTTTTTTTTtGGGTTCTTCGTAATCTTCTTCTTTTCCATGGTTTCAAGATTTAGAGCAACTTGATCTATCGCTTGTTGATTTCGAGATTCAGTTGAGTTTTGACAAATTATATCATCTTGTGAATGTTATGCAGGAGAGGAATTTCAAATTTCTATAACGGGAAATCGAAATCCTTCACAAGCCTAGTAGACGCTTCCTCCTCCTCCTCCATTAAAGACATAGCGAAGCCTGAAAACGCTTTCTCTCGAAAACGGAGGAATCTTCTTGCATCTAATCTAATCGCCGGCGGCATATCAAAGCGTCCGATTATTAGTTCAAGTCGAAGCTCGTTAGCGTTGGCCGTCGTCCTGAGCAGTTCTGAAATCCACAAAAATAACGATCTGAATTCAATATTACCTCCGCCGACGCTGATTCGTCCTCCATTGTACCCCAACGGGCGAGGATCTCGTATCAATTCAGGTTCTGCAGTTCCATCTCTCTGTAAATTCCCAACTTGGCGATCATACTCCATGGCCAATATACAGTAGCTAGCGTAGGGAAGGGTTTTCCCATGGCGTCCATGGAAGCTAAATCACCATGAAAGACTAACTTAACCTCTTGTGAAACCGAGTTTCATCGAATTGGTTTCTGACGAATAACTCATTTTCTTTCAAATTTCCCACGATCTTAGGAACTCTGTTTTGATTTCCTTTTTGTATGAATGTATGTAAAGTGAAAAGAGAAAAAGCATAGCAGTTCATATTTTGAATCGATTTCTGTTTGTTCATACAATTTGAATATCAGCAAATGGAGAGAGCATGAGAGTTTCTTTTTTtAAATAAAGTAATGGGAAAAATACAGATAAGAGTTTGGGGCAAACTGAAAAGGAATTGGTAATGAATGTGTCAATGTCATATAAAGCTGATGGACTAAAATGGCATTAGAAGTGTTTATGGGATTTTATCCAATTCAATCTAAAATTACAACTAATTGTTGTTTAATAGATTGAAGGAAAGGAAAAGTGGTCAATTTGGGAGATGTTGTATCATGTGTGAAATTATATACTTTCACAATTATCAAATCATACAAAGTC

mRNA sequence

TACAATTTCTCTTATCAAAATGAAAAGTAGTTCAGGTTAGGTTGGAGCCAGTGTGGACTTTGGTTTTTTCGTTTTAGGTTAGAGACAGTTTTTGTTATTGTTAAAGAAAAGGTTAGAAATTAAAAAGGATAAGAAAAAGGTGAGAGCGGAACATGAAAGGGCGATGGAAGCGCAGGCAGGGGATAAAAGGCTAAAATAATAAAAGAAAAGGAAAAAAAGAGAAAATAATAAAGTGATGAATGGAAGCCCGGCAGATGAGGATAAGGCCTTGGGCTTTCCTTTTCGGAGTTCTTTATCCTTTTCATTAACTCTCTCATCCTAGATGATATTACTCTTCTCTTCTCCTTCATTAATTGTCTACAAATCCATAATTTTCTATATTTAAATTCTTGTCTCTTCTTCTCTACACAATCTCTCCACTCCCATCGATATATCAATGCCAAACTATATTTCTTAATCTCATCTTCATTTTAAAACTATAATCTTCTTCCTTCTCTATCCCATTTGAATCACTCAATTATGTCAATTGCTCTGGAAACCAATACCGTTTTTTCTCAACCTGGATTGCCCTCTTACTGTTCTGTCTTGAATACCACCGGAATTATTCCGGTTGTTCGGCGAGAGGCGGCTCTTGCTGATGCGGTGGCGCCGGCGGATGTGGATAGATGTACTTCCTCTTCATCGTCCTCGATCGGAGAAAATAGTGGTTTCTCTGTACGATTATCGGATAATGACGATGGAGAGGATAATGAGGCGGAAAGTTCGTATAAAGGACCTCTAGGAATGGAGTCGTTGGAAGAAGTTCTGCCTATCAGGAGAGGAATTTCAAATTTCTATAACGGGAAATCGAAATCCTTCACAAGCCTAGTAGACGCTTCCTCCTCCTCCTCCATTAAAGACATAGCGAAGCCTGAAAACGCTTTCTCTCGAAAACGGAGGAATCTTCTTGCATCTAATCTAATCGCCGGCGGCATATCAAAGCGTCCGATTATTAGTTCAAGTCGAAGCTCGTTAGCGTTGGCCGTCGTCCTGAGCAGTTCTGAAATCCACAAAAATAACGATCTGAATTCAATATTACCTCCGCCGACGCTGATTCGTCCTCCATTGTACCCCAACGGGCGAGGATCTCGTATCAATTCAGGTTCTGCAGTTCCATCTCTCTGTAAATTCCCAACTTGGCGATCATACTCCATGGCCAATATACAGTAGCTAGCGTAGGGAAGGGTTTTCCCATGGCGTCCATGGAAGCTAAATCACCATGAAAGACTAACTTAACCTCTTGTGAAACCGAGTTTCATCGAATTGGTTTCTGACGAATAACTCATTTTCTTTCAAATTTCCCACGATCTTAGGAACTCTGTTTTGATTTCCTTTTTGTATGAATGTATGTAAAGTGAAAAGAGAAAAAGCATAGCAGTTCATATTTTGAATCGATTTCTGTTTGTTCATACAATTTGAATATCAGCAAATGGAGAGAGCATGAGAGTTTCTTTTTTTAAATAAAGTAATGGGAAAAATACAGATAAGAGTTTGGGGCAAACTGAAAAGGAATTGGTAATGAATGTGTCAATGTCATATAAAGCTGATGGACTAAAATGGCATTAGAAGTGTTTATGGGATTTTATCCAATTCAATCTAAAATTACAACTAATTGTTGTTTAATAGATTGAAGGAAAGGAAAAGTGGTCAATTTGGGAGATGTTGTATCATGTGTGAAATTATATACTTTCACAATTATCAAATCATACAAAGTC

Coding sequence (CDS)

ATGTCAATTGCTCTGGAAACCAATACCGTTTTTtCTCAACCTGGATTGCCCTCTTACTGTTCTGTCTTGAATACCACCGGAATTATTCCGGTTGTTCGGCGAGAGGCGGCTCTTGCTGATGCGGTGGCGCCGGCGGATGTGGATAGATGTACTTCCTCTTCATCGTCCTCGATCGGAGAAAATAGTGGTTTCTCTGTACGATTATCGGATAATGACGATGGAGAGGATAATGAGGCGGAAAGTTCGTATAAAGGACCTCTAGGAATGGAGTCGTTGGAAGAAGTTCTGCCTATCAGGAGAGGAATTTCAAATTTCTATAACGGGAAATCGAAATCCTTCACAAGCCTAGTAGACGCTTCCTCCTCCTCCTCCATTAAAGACATAGCGAAGCCTGAAAACGCTTTCTCTCGAAAACGGAGGAATCTTCTTGCATCTAATCTAATCGCCGGCGGCATATCAAAGCGTCCGATTATTAGTTCAAGTCGAAGCTCGTTAGCGTTGGCCGTCGTCCTGAGCAGTTCTGAAATCCACAAAAATAACGATCTGAATTCAATATTACCTCCGCCGACGCTGATTCGTCCTCCATTGTACCCCAACGGGCGAGGATCTCGTATCAATTCAGGTTCTGCAGTTCCATCTCTCTGTAAATTCCCAACTTGGCGATCATACTCCATGGCCAATATACAGTAG

Protein sequence

MSIALETNTVFSQPGLPSYCSVLNTTGIIPVVRREAALADAVAPADVDRCTSSSSSSIGENSGFSVRLSDNDDGEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFTSLVDASSSSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSSEIHKNNDLNSILPPPTLIRPPLYPNGRGSRINSGSAVPSLCKFPTWRSYSMANIQ*

Homology

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BLAST of Cucsa.055990 vs. TrEMBL
Match: A0A0A0KFI7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G361410 PE=4 SV=1)

HSP 1 Score: 443.4 bits (1139), Expect = 1.7e-121
Identity = 228/229 (99.56%), Postives = 228/229 (99.56%), Query Frame = 1


Query: 1   MSIALETNTVFSQPGLPSYCSVLNTTGIIPVVRREAALADAVAPADVDRCTSSSSSSIGE 60
           MSIALETNTVFSQPGLPSYCSVLNTTGIIPVVRREAALADAVAPADVDRCTSSSSSSIGE
Sbjct: 1   MSIALETNTVFSQPGLPSYCSVLNTTGIIPVVRREAALADAVAPADVDRCTSSSSSSIGE 60

Query: 61  NSGFSVRLSDNDDGEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFTSLVDAS 120
           NSGFSVR SDNDDGEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFTSLVDAS
Sbjct: 61  NSGFSVRSSDNDDGEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFTSLVDAS 120

Query: 121 SSSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSSEIHKNN 180
           SSSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSSEIHKNN
Sbjct: 121 SSSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSSEIHKNN 180

Query: 181 DLNSILPPPTLIRPPLYPNGRGSRINSGSAVPSLCKFPTWRSYSMANIQ 230
           DLNSILPPPTLIRPPLYPNGRGSRINSGSAVPSLCKFPTWRSYSMANIQ
Sbjct: 181 DLNSILPPPTLIRPPLYPNGRGSRINSGSAVPSLCKFPTWRSYSMANIQ 229

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BLAST of Cucsa.055990 vs. TrEMBL
Match: A0A0A0L451_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G648530 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 3.1e-46
Identity = 115/196 (58.67%), Postives = 140/196 (71.43%), Query Frame = 1


Query: 51  TSSSSSSIGENSGFSVRLSDNDDGEDNEAESSYKGPLGM-ESLEEVLPIRRGISNFYNGK 110
           ++SSSSSIG NS  S    D D+GE++E +SSYKGPL M +SLEEVLP+R+GIS FY+GK
Sbjct: 59  STSSSSSIGRNSDQS---DDEDNGENDEVQSSYKGPLDMMDSLEEVLPVRKGISKFYSGK 118

Query: 111 SKSFTSLVDASSSSSIKDIAKPENAFSRKRRNLLASNLI------------AGGISKRPI 170
           SKSFTSL DASS +S+K+IAKPENA+S+KRRNL+A NL+             GGISKRP 
Sbjct: 119 SKSFTSLADASSVNSMKEIAKPENAYSKKRRNLMAYNLVWEKNRSFPLKNNGGGISKRP- 178

Query: 171 ISSSRSSLALAVVLSSSEIHKNNDLN----SILPPPTLIRPPLYPNGRGSRINSGSAVPS 230
           ISSS+SSLALAV +SSSE + + D N    S  PPP   RPPL+P  R S  N  S VP 
Sbjct: 179 ISSSKSSLALAVAMSSSESNSSEDSNCSSYSSSPPP---RPPLHPQSRPSNNNFPSMVPP 238

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BLAST of Cucsa.055990 vs. TrEMBL
Match: W9RF79_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_018609 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 2.5e-43
Identity = 119/216 (55.09%), Postives = 145/216 (67.13%), Query Frame = 1


Query: 32  VRREAALADAVAPADVDRCTSSSSSSIGENSGFSVRLS-DNDDGEDNEAESSYKGPLGM- 91
           V+   A  +  + A      S+SSSSIG+NS  SVR S D DD E+NEA+SSYKGPL M 
Sbjct: 41  VKESNACNNETSSASASASASASSSSIGKNSDLSVRSSSDGDDCEENEAQSSYKGPLEMM 100

Query: 92  ESLEEVLPIRRGISNFYNGKSKSFTSLVDASSSSSIKDIAKPENAFSRKRRNLLASNLI- 151
           E+LEEVLPIRRGIS FYNGKSKSFTSL DA+S+SSIKDI KPENA++RKRRNL+A N + 
Sbjct: 101 EALEEVLPIRRGISKFYNGKSKSFTSLGDAASTSSIKDITKPENAYTRKRRNLMAFNHVW 160

Query: 152 ------------AGGISKRPIISSSRSSLALAVVLSSSEIHK--NNDLNSILPPPTLIRP 211
                        GGISKRP ISSSRSSLALA+ +SSSE     ++D +S  PPP    P
Sbjct: 161 DNKNRSFPLRSNGGGISKRP-ISSSRSSLALAMAMSSSESSSSTSDDSSSRSPPPL---P 220

Query: 212 PLYPNGRGS-RINSGSAVPSLCKFPTWRSYSMANIQ 230
           PL+P  R S  + S ++ P    F   RS S+A++Q
Sbjct: 221 PLHPQARASFHVKSSTSPPR--HFCASRSLSLADLQ 250

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BLAST of Cucsa.055990 vs. TrEMBL
Match: A5B5R8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g02000 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 2.6e-40
Identity = 111/235 (47.23%), Postives = 147/235 (62.55%), Query Frame = 1


Query: 18  SYCSVLNTTGIIPVVRREAALADAVAPAD-----VDRCTSSSSSSIGENSGFSVRLSDND 77
           S  S+  +  ++   RR  A  +  A A+     +D C  SSSSSIG+NS  S   SD +
Sbjct: 22  SCISIFESPELLTGDRRFPAGGEMAAKAEEREEELDSC--SSSSSIGKNSDVSGMSSDQE 81

Query: 78  DGEDNEAESSYKGPL-GMESLEEVLPIRRGISNFYNGKSKSFTSLVDASSSSSIKDIAKP 137
           D  + E +SSYK PL  M +LEEVLP+RRGIS FYNGKSKSFTSL DAS+S+S KD+AKP
Sbjct: 82  DSGETEVQSSYKRPLDSMNALEEVLPLRRGISRFYNGKSKSFTSLADASTSASCKDLAKP 141

Query: 138 ENAFSRKRRNLLASNLI------------AGGISKRPIISSSRSSLALAVVLSSSEIHK- 197
           ENA++R+RRNLLA N +             GGISK+ + ++SRS+LALAV +SSS+ +  
Sbjct: 142 ENAYNRRRRNLLAYNHVLDKNRNFPLRSNGGGISKK-LAATSRSTLALAVAMSSSDSNNS 201

Query: 198 ----NNDLNSILPPPTLIRPPLYPNGRGSRINSGSAVPSLCKFPTWRSYSMANIQ 230
               N+ LN I   P+L+ PPL+P  R    N  S+ P       WRSYS+A++Q
Sbjct: 202 SEDLNSSLNCISRSPSLLLPPLHPQARLYHNNVSSSPPQR-NLSAWRSYSLADLQ 252

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BLAST of Cucsa.055990 vs. TrEMBL
Match: A9PBN9_POPTR (MTD1 family protein OS=Populus trichocarpa GN=POPTR_0006s23640g PE=2 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 4.4e-40
Identity = 111/212 (52.36%), Postives = 140/212 (66.04%), Query Frame = 1


Query: 32  VRREAALADAVAPADVDRCTSSSSSSIGENSGFSVRLSDNDDG-EDNEAESSYKGPL-GM 91
           V R   +A+  +P+     T+SSSSSIG+NS  +      +DG E+NE +S+YKG L  M
Sbjct: 23  VERRKEMAEECSPSS---STTSSSSSIGKNSDLT---DGGEDGLEENEVQSAYKGTLDSM 82

Query: 92  ESLEEVLPIRRGISNFYNGKSKSFTSLVDASSSSSIKDIAKPENAFSRKRRNLLASNLI- 151
           E+LEEVLPIRRGISNFYNGKSKSFTSL DASSS SIKDIAKPENA++RKRRNLLA + + 
Sbjct: 83  EALEEVLPIRRGISNFYNGKSKSFTSLSDASSSPSIKDIAKPENAYTRKRRNLLAFSHVW 142

Query: 152 --------AGGISKRPIISSSRSSLALAVVLSSSE---IHKNNDLNSILPPPTLIRPPLY 211
                     GI+KRP IS+S+S+LALAV +SSSE       +  ++   PP L  PPL+
Sbjct: 143 EKTRSFPYRSGIAKRP-ISNSKSTLALAVAMSSSESISSASEDSTSTSKSPPNL--PPLH 202

Query: 212 PNGRGSRINSGSAVPSLCKFPTWRSYSMANIQ 230
           P  R S  N  S       F  WRS+S+A++Q
Sbjct: 203 PRSRASHNNLTSLPSPRQNFSPWRSFSLADLQ 225

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BLAST of Cucsa.055990 vs. TAIR10
Match: AT5G21940.1 (AT5G21940.1 unknown protein)

HSP 1 Score: 137.9 bits (346), Expect = 7.9e-33
Identity = 94/212 (44.34%), Postives = 128/212 (60.38%), Query Frame = 1


Query: 51  TSSSSSSIGENSGFSVRLSDN--DDGEDNEAESSYKGPLGM-ESLEEVLPIRRGISNFYN 110
           +SS+SSSIG NS    + S++  DD  +NE ES YKGPL M ESLE+VLP+R+GIS +Y+
Sbjct: 37  SSSASSSIGRNSDDGEKSSEDGGDDAGENEVESPYKGPLEMMESLEQVLPVRKGISKYYS 96

Query: 111 GKSKSFTSLV-----DASSSSSIKDIAKPENAFSRKRRNLLASNL-------IAGGISKR 170
           GKSKSFT+L        +SSSS+KD+AKPEN +SR+RRNLL   +         GGISK+
Sbjct: 97  GKSKSFTNLTAEAASALTSSSSMKDLAKPENPYSRRRRNLLCHQIWENNKTTPRGGISKK 156

Query: 171 PIISSSRSSLALAVVLSSSEI------------HKNNDLNSILPPPTLIR--------PP 228
            ++SSSRS+L LA+ +++  +              ++   S  PP  L          PP
Sbjct: 157 HVMSSSRSALTLAMAVAAGVMTGEGSSSGGDSSPGSSPTTSGSPPRQLHHHQHQMKKLPP 216

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BLAST of Cucsa.055990 vs. TAIR10
Match: AT3G43850.1 (AT3G43850.1 unknown protein)

HSP 1 Score: 113.6 bits (283), Expect = 1.6e-25
Identity = 65/111 (58.56%), Postives = 81/111 (72.97%), Query Frame = 1


Query: 51  TSSSSSSIGENSGFSVRLSDNDDGEDNEAESSYKGPLGM-ESLEEVLPIRRGISNFYNGK 110
           +S+SS SIGENS       D+D+G +NE ESSY GPL M ESLEE LPI+R IS FY GK
Sbjct: 23  SSTSSDSIGENS-------DDDEGGENEIESSYNGPLDMMESLEEALPIKRAISKFYKGK 82

Query: 111 SKSFTSLVDASSSSSIKDIAKPENAFSRKRRNLLASNLIA-GGISKRPIIS 160
           SKSF SL + +SS  +KD+ KPEN +SR+RRNLL+  + + GGISK+P  S
Sbjct: 83  SKSFMSLSE-TSSLPVKDLTKPENLYSRRRRNLLSHRICSRGGISKKPFKS 125

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BLAST of Cucsa.055990 vs. TAIR10
Match: AT2G24550.1 (AT2G24550.1 unknown protein)

HSP 1 Score: 74.7 bits (182), Expect = 8.2e-14
Identity = 46/105 (43.81%), Postives = 70/105 (66.67%), Query Frame = 1


Query: 51  TSSSSSSIGENSGFSVRLSDNDDGEDNEAESSYKGPLGM--ESLEEVLPIRRGISNFYNG 110
           +S SSSSIGE+S       + ++ E+++A S  +G L     SLE+ LPI+RG+SN Y G
Sbjct: 64  SSDSSSSIGESS------ENEEEEEEDDAVSCQRGTLDSFSSSLEDSLPIKRGLSNHYVG 123

Query: 111 KSKSFTSLVDASSSSSIKDIAKPENAFSRKRRNLLASNLIAGGIS 154
           KSKSF +L++A+S +  KD+ K EN F+++RR ++A+ L   G S
Sbjct: 124 KSKSFGNLMEAASKA--KDLEKVENPFNKRRRLVIANKLRRRGRS 160

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BLAST of Cucsa.055990 vs. TAIR10
Match: AT4G31510.1 (AT4G31510.1 unknown protein)

HSP 1 Score: 69.7 bits (169), Expect = 2.7e-12
Identity = 59/164 (35.98%), Postives = 86/164 (52.44%), Query Frame = 1


Query: 33  RREAALADAVAPADVD------RCTSS----SSSSIGENSGFSVRLSDNDDGEDNEAESS 92
           R      D   PA +       RC  S    SSSS+GE S       +N++ ED+   SS
Sbjct: 12  RSSVTTHDQAVPASLSSRIGLRRCGRSPPPESSSSVGETS-------ENEEDEDDAVSSS 71

Query: 93  YKGPLGM--ESLEEVLPIRRGISNFYNGKSKSFTSLVDASSSSSIKDIAKPENAFSRKRR 152
               L     SLE+ LPI+RG+SN Y GKSKSF +L++AS+++   D+ K E+  +++RR
Sbjct: 72  QGRWLNSFSSSLEDSLPIKRGLSNHYIGKSKSFGNLMEASNTN---DLVKVESPLNKRRR 131

Query: 153 NLLASNL-IAGGISKRPIIS--SSRSSLALAVVLSSSEIHKNND 182
            L+A+ L     +S   I +  +  S   LA+  S +E HK ND
Sbjct: 132 LLIANKLRRRSSLSSFSIYTKINPNSMPLLALQESDNEDHKLND 165

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BLAST of Cucsa.055990 vs. TAIR10
Match: AT5G24890.1 (AT5G24890.1 unknown protein)

HSP 1 Score: 65.1 bits (157), Expect = 6.5e-11
Identity = 39/98 (39.80%), Postives = 58/98 (59.18%), Query Frame = 1


Query: 52  SSSSSSIGE--NSGFSVRLSDNDDGEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGK 111
           SS SSSIG   +S      S+N++ + +  E   +G   M SLE+ LP +RG+SN Y GK
Sbjct: 59  SSDSSSIGTPGDSEEDEEESENENDDVSSKELGLRGLASMSSLEDSLPSKRGLSNHYKGK 118

Query: 112 SKSFTSLVDASSSSSIKDIAKPENAFSRKRRNLLASNL 148
           SKSF +L       S+K++AK EN  +++RR  + + L
Sbjct: 119 SKSFGNL---GEIGSVKEVAKQENPLNKRRRLQICNKL 153

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BLAST of Cucsa.055990 vs. NCBI nr
Match: gi|449452937|ref|XP_004144215.1| (PREDICTED: uncharacterized protein LOC101211014 [Cucumis sativus])

HSP 1 Score: 443.4 bits (1139), Expect = 2.5e-121
Identity = 228/229 (99.56%), Postives = 228/229 (99.56%), Query Frame = 1


Query: 1   MSIALETNTVFSQPGLPSYCSVLNTTGIIPVVRREAALADAVAPADVDRCTSSSSSSIGE 60
           MSIALETNTVFSQPGLPSYCSVLNTTGIIPVVRREAALADAVAPADVDRCTSSSSSSIGE
Sbjct: 1   MSIALETNTVFSQPGLPSYCSVLNTTGIIPVVRREAALADAVAPADVDRCTSSSSSSIGE 60

Query: 61  NSGFSVRLSDNDDGEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFTSLVDAS 120
           NSGFSVR SDNDDGEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFTSLVDAS
Sbjct: 61  NSGFSVRSSDNDDGEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFTSLVDAS 120

Query: 121 SSSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSSEIHKNN 180
           SSSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSSEIHKNN
Sbjct: 121 SSSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSSEIHKNN 180

Query: 181 DLNSILPPPTLIRPPLYPNGRGSRINSGSAVPSLCKFPTWRSYSMANIQ 230
           DLNSILPPPTLIRPPLYPNGRGSRINSGSAVPSLCKFPTWRSYSMANIQ
Sbjct: 181 DLNSILPPPTLIRPPLYPNGRGSRINSGSAVPSLCKFPTWRSYSMANIQ 229

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BLAST of Cucsa.055990 vs. NCBI nr
Match: gi|659089501|ref|XP_008445543.1| (PREDICTED: uncharacterized protein LOC103488525 [Cucumis melo])

HSP 1 Score: 411.8 bits (1057), Expect = 8.1e-112
Identity = 214/234 (91.45%), Postives = 221/234 (94.44%), Query Frame = 1


Query: 1   MSIALETNT-----VFSQPGLPSYCSVLNTTGIIPVVRREAALADAVAPADVDRCTSSSS 60
           MSIALE+NT     VFSQ GLP YCSVLNTTGIIPVVRREAA+ADAVAP DVDRC+SSSS
Sbjct: 36  MSIALESNTRIPPSVFSQAGLPPYCSVLNTTGIIPVVRREAAVADAVAPEDVDRCSSSSS 95

Query: 61  SSIGENSGFSVRLSDNDDGEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFTS 120
           SSIGENSGFSVR SDNDDGEDNEAESSY+GPLGMESLEEVLPIRRGISNFYNGKSKSFTS
Sbjct: 96  SSIGENSGFSVRSSDNDDGEDNEAESSYRGPLGMESLEEVLPIRRGISNFYNGKSKSFTS 155

Query: 121 LVDASSSSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSSE 180
           L DASSSSSIK+IAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSSE
Sbjct: 156 LADASSSSSIKEIAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSSE 215

Query: 181 IHKNNDLNSILPPPTLIRPPLYPNGRGSRINSGSAVPSLCKFPTWRSYSMANIQ 230
            HKNNDLNSI+PPPT IRPPL+PNGR SRINSGSAVPSLCKFPTWRSYSMANIQ
Sbjct: 216 SHKNNDLNSIIPPPTPIRPPLHPNGRASRINSGSAVPSLCKFPTWRSYSMANIQ 269

[Close]

BLAST of Cucsa.055990 vs. NCBI nr
Match: gi|449447177|ref|XP_004141345.1| (PREDICTED: vitellogenin-2-like [Cucumis sativus])

HSP 1 Score: 193.4 bits (490), Expect = 4.5e-46
Identity = 115/196 (58.67%), Postives = 140/196 (71.43%), Query Frame = 1


Query: 51  TSSSSSSIGENSGFSVRLSDNDDGEDNEAESSYKGPLGM-ESLEEVLPIRRGISNFYNGK 110
           ++SSSSSIG NS  S    D D+GE++E +SSYKGPL M +SLEEVLP+R+GIS FY+GK
Sbjct: 59  STSSSSSIGRNSDQS---DDEDNGENDEVQSSYKGPLDMMDSLEEVLPVRKGISKFYSGK 118

Query: 111 SKSFTSLVDASSSSSIKDIAKPENAFSRKRRNLLASNLI------------AGGISKRPI 170
           SKSFTSL DASS +S+K+IAKPENA+S+KRRNL+A NL+             GGISKRP 
Sbjct: 119 SKSFTSLADASSVNSMKEIAKPENAYSKKRRNLMAYNLVWEKNRSFPLKNNGGGISKRP- 178

Query: 171 ISSSRSSLALAVVLSSSEIHKNNDLN----SILPPPTLIRPPLYPNGRGSRINSGSAVPS 230
           ISSS+SSLALAV +SSSE + + D N    S  PPP   RPPL+P  R S  N  S VP 
Sbjct: 179 ISSSKSSLALAVAMSSSESNSSEDSNCSSYSSSPPP---RPPLHPQSRPSNNNFPSMVPP 238

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BLAST of Cucsa.055990 vs. NCBI nr
Match: gi|659104048|ref|XP_008452790.1| (PREDICTED: uncharacterized protein DDB_G0271670 [Cucumis melo])

HSP 1 Score: 193.4 bits (490), Expect = 4.5e-46
Identity = 115/196 (58.67%), Postives = 140/196 (71.43%), Query Frame = 1


Query: 51  TSSSSSSIGENSGFSVRLSDNDDGEDNEAESSYKGPLGM-ESLEEVLPIRRGISNFYNGK 110
           ++SSSSSIG NS  S    D D+GE++E +SSYKGPL M +SLEEVLP+R+GIS FY+GK
Sbjct: 60  STSSSSSIGRNSDQS---DDEDNGENDEVQSSYKGPLDMMDSLEEVLPVRKGISKFYSGK 119

Query: 111 SKSFTSLVDASSSSSIKDIAKPENAFSRKRRNLLASNLI------------AGGISKRPI 170
           SKSFTSL DASS +S+K+IAKPENA+S+KRRNL+A NL+             GGISKRP 
Sbjct: 120 SKSFTSLADASSVNSMKEIAKPENAYSKKRRNLMAYNLVWEKNRSFPLKNNGGGISKRP- 179

Query: 171 ISSSRSSLALAVVLSSSEIHKNNDLN----SILPPPTLIRPPLYPNGRGSRINSGSAVPS 230
           ISSS+SSLALAV +SSSE + + D N    S  PPP   RPPL+P  R S  N  S VP 
Sbjct: 180 ISSSKSSLALAVAMSSSESNSSEDSNSSSYSSSPPP---RPPLHPQSRPSNNNFPSMVPP 239

[Close]

BLAST of Cucsa.055990 vs. NCBI nr
Match: gi|703105965|ref|XP_010098377.1| (hypothetical protein L484_018609 [Morus notabilis])

HSP 1 Score: 183.7 bits (465), Expect = 3.6e-43
Identity = 119/216 (55.09%), Postives = 145/216 (67.13%), Query Frame = 1


Query: 32  VRREAALADAVAPADVDRCTSSSSSSIGENSGFSVRLS-DNDDGEDNEAESSYKGPLGM- 91
           V+   A  +  + A      S+SSSSIG+NS  SVR S D DD E+NEA+SSYKGPL M 
Sbjct: 41  VKESNACNNETSSASASASASASSSSIGKNSDLSVRSSSDGDDCEENEAQSSYKGPLEMM 100

Query: 92  ESLEEVLPIRRGISNFYNGKSKSFTSLVDASSSSSIKDIAKPENAFSRKRRNLLASNLI- 151
           E+LEEVLPIRRGIS FYNGKSKSFTSL DA+S+SSIKDI KPENA++RKRRNL+A N + 
Sbjct: 101 EALEEVLPIRRGISKFYNGKSKSFTSLGDAASTSSIKDITKPENAYTRKRRNLMAFNHVW 160

Query: 152 ------------AGGISKRPIISSSRSSLALAVVLSSSEIHK--NNDLNSILPPPTLIRP 211
                        GGISKRP ISSSRSSLALA+ +SSSE     ++D +S  PPP    P
Sbjct: 161 DNKNRSFPLRSNGGGISKRP-ISSSRSSLALAMAMSSSESSSSTSDDSSSRSPPPL---P 220

Query: 212 PLYPNGRGS-RINSGSAVPSLCKFPTWRSYSMANIQ 230
           PL+P  R S  + S ++ P    F   RS S+A++Q
Sbjct: 221 PLHPQARASFHVKSSTSPPR--HFCASRSLSLADLQ 250

The following BLAST results are available for this feature:

BLAST of Cucsa.055990 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KFI7_CUCSA	1.7e-121	99.56	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G361410 PE=4 SV=1	[more]
A0A0A0L451_CUCSA	3.1e-46	58.67	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G648530 PE=4 SV=1	[more]
W9RF79_9ROSA	2.5e-43	55.09	Uncharacterized protein OS=Morus notabilis GN=L484_018609 PE=4 SV=1	[more]
A5B5R8_VITVI	2.6e-40	47.23	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g02000 PE=4 SV=...	[more]
A9PBN9_POPTR	4.4e-40	52.36	MTD1 family protein OS=Populus trichocarpa GN=POPTR_0006s23640g PE=2 SV=1	[more]

BLAST of Cucsa.055990 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G21940.1	7.9e-33	44.34	unknown protein	[more]
AT3G43850.1	1.6e-25	58.56	unknown protein	[more]
AT2G24550.1	8.2e-14	43.81	unknown protein	[more]
AT4G31510.1	2.7e-12	35.98	unknown protein	[more]
AT5G24890.1	6.5e-11	39.80	unknown protein	[more]

BLAST of Cucsa.055990 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449452937\|ref\|XP_004144215.1\|	2.5e-121	99.56	PREDICTED: uncharacterized protein LOC101211014 [Cucumis sativus]	[more]
gi\|659089501\|ref\|XP_008445543.1\|	8.1e-112	91.45	PREDICTED: uncharacterized protein LOC103488525 [Cucumis melo]	[more]
gi\|449447177\|ref\|XP_004141345.1\|	4.5e-46	58.67	PREDICTED: vitellogenin-2-like [Cucumis sativus]	[more]
gi\|659104048\|ref\|XP_008452790.1\|	4.5e-46	58.67	PREDICTED: uncharacterized protein DDB_G0271670 [Cucumis melo]	[more]
gi\|703105965\|ref\|XP_010098377.1\|	3.6e-43	55.09	hypothetical protein L484_018609 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.055990.1	Cucsa.055990.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33172	FAMILY NOT NAMED	coord: 48..229 score: 1.7
None	No IPR available	PANTHER	PTHR33172:SF6	SUBFAMILY NOT NAMED	coord: 48..229 score: 1.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.055990	Cla021964	Watermelon (97103) v1	cgywmB045
Cucsa.055990	Csa6G361410	Cucumber (Chinese Long) v2	cgycuB041
Cucsa.055990	MELO3C011491	Melon (DHL92) v3.5.1	cgymeB040
Cucsa.055990	ClCG08G009780	Watermelon (Charleston Gray)	cgywcgB046
Cucsa.055990	CSPI06G19030	Wild cucumber (PI 183967)	cgycpiB042
Cucsa.055990	CmaCh05G004110	Cucurbita maxima (Rimu)	cgycmaB0074
Cucsa.055990	CmoCh05G004230	Cucurbita moschata (Rifu)	cgycmoB0069
Cucsa.055990	Lsi08G008290	Bottle gourd (USVL1VR-Ls)	cgylsiB045
Cucsa.055990	Cp4.1LG11g03510	Cucurbita pepo (Zucchini)	cgycpeB0068
Cucsa.055990	MELO3C011491.2	Melon (DHL92) v3.6.1	cgymedB040
Cucsa.055990	CsaV3_6G031910	Cucumber (Chinese Long) v3	cgycucB044
Cucsa.055990	Cla97C08G152580	Watermelon (97103) v2	cgywmbB045
Cucsa.055990	Bhi04G001194	Wax gourd	cgywgoB046
Cucsa.055990	Carg09313	Silver-seed gourd	carcgyB0168

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None