CmaCh05G004110 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh05G004110
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Damaged dna-binding 2, putative isoform 1
Location	Cma_Chr05 : 1808837 .. 1810516 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATGAAAGGCCGGCAGGTGTGGATAAGGCCTTCGGCTTTCCTTTTCTGAATTCTTTATCCTTTTCATCAACTCGCTGATCGAAGATGATTTTATTGTTTACGTTCATTAATTGTTTCAGAATCCATAATTTTTATGTTTAAATTGTTGTCTGATCTTCTTTGCCCAATCTCTCTCCACTGTATAATCTCAGTTTCTGTTTCTGATTTGCATTTCCATGGTGATCTTCTTCCTCCATTGATATAAGCATCATATCCTCCCACTTAGCTTTCAACACGTTTTGGTTTATTTCGGTTCATACCTTTGGATTTGAATTACTCAGTCATGTCAATTGCTTTGGAGAGCAATAGCAGGATTCCGCCGTCCGTTTTCTCGCAAGGTGTCTTGCCGTCGTACTGCTCCGTCTTGAATACGACGGGAGTTATTCCGGTAGTTCGACGAGAGGCTGTTGTTGGTGATGTGGTGGCGCCGGCGGAGGTGGTGGATAGATGTAGTTCGTCTTCATCGTCGTCGATCGGAGAAAATAGTGATTTCTCTGTTAGATCGGTGAATGATGATGATGGAGAGGATAATGAGGCGGAAAGTTCGTATAAAGAATCTCTAGGAATGGAATCGTTGGAGGAAGTTTTGTCTATCAGGTTAGCGATTGTAATTTGTTTTTTATTTTTCGTAATCTTCTTCTCCAAGTTTTCTAGATTTAGGGCAACTTGATCGGCGATTTCGTTTCTGAATATTTTAACGATGAGATTCCGTTCAATTTTAACAAATTAGATCAACTTATGAATTTGCAGGAGAGGAATTTCAAATTTCTACAACGGAAAATCGAAATCGTTCACGAGCCTGGGAGACGCTTCCTCTACTTCGTCCATAAAAGACATAGCGAAACCTGAAAACGCCTTCTCTCGGAAACGGAGAAATCTTCTTGCATCTAATCTAATCGCCGGCGGCATATCGAAGCGGCCGATCATTAGTTCACGAGGAAGCTCGTTAGCGTTGGCCGTGTTCATGAGCAGTTCTGAAAGGAAAAGCGGCGACGTCCTGAATTCGAGATTGTCTCCGACGATTCGTCCTCCATTGCACCCCAACGGACGAGCATCTCGTAGCAATTCAGGTTCCGCAGTTCCTCTTCTCTGTAAATTTCCCACTTGGCGATCATACTCCTTGGCCAATATACAGTAGCGTAGGGTAAGAGTTTTCCATGGCCCCATGGAAGCGAATCACCATCAAGACTAACTTGACCTTTCATCAAATCGGCCTCTCCCAAATAACTCGTCCTCGTTCAAATTATCATCGAGCTTAATTCTGCTGCAACTCTGTTTTGTTGTTGTTGTCGTTTTTTTTTTAATTTTTTATTTTATGTAAATTGAAAAGCAAAAAAGAATAGCTGTTTGATCATCGAATCAACGTCTGTTCGTTTATAGAATTTGCATGGAAAATGGAAAGATCTGAGTTTCTTTTTCGGATAAAGTTATAAAGAAAATTACAGATTATTGGGCAAAAACTTGGGCAAATCGGAAACGAATCACGAAGGATTGTCAATGTCCAATCTTTAGAGTACGTGAAGAACATTGAGCCAGTGGACTAAAATGAAAATACAAGTACCAAGAACAATAATTATGGGATCCTAGATTGAACTATCAATTACCAAAATTCTTGATAGAAATATGTTAAAACCAAACCAA

mRNA sequence

TATGAAAGGCCGGCAGGTGTGGATAAGGCCTTCGGCTTTCCTTTTCTGAATTCTTTATCCTTTTCATCAACTCGCTGATCGAAGATGATTTTATTGTTTACGTTCATTAATTGTTTCAGAATCCATAATTTTTATGTTTAAATTGTTGTCTGATCTTCTTTGCCCAATCTCTCTCCACTGTATAATCTCAGTTTCTGTTTCTGATTTGCATTTCCATGGTGATCTTCTTCCTCCATTGATATAAGCATCATATCCTCCCACTTAGCTTTCAACACGTTTTGGTTTATTTCGGTTCATACCTTTGGATTTGAATTACTCAGTCATGTCAATTGCTTTGGAGAGCAATAGCAGGATTCCGCCGTCCGTTTTCTCGCAAGGTGTCTTGCCGTCGTACTGCTCCGTCTTGAATACGACGGGAGTTATTCCGGTAGTTCGACGAGAGGCTGTTGTTGGTGATGTGGTGGCGCCGGCGGAGGTGGTGGATAGATGTAGTTCGTCTTCATCGTCGTCGATCGGAGAAAATAGTGATTTCTCTGTTAGATCGGTGAATGATGATGATGGAGAGGATAATGAGGCGGAAAGTTCGTATAAAGAATCTCTAGGAATGGAATCGTTGGAGGAAGTTTTGTCTATCAGGAGAGGAATTTCAAATTTCTACAACGGAAAATCGAAATCGTTCACGAGCCTGGGAGACGCTTCCTCTACTTCGTCCATAAAAGACATAGCGAAACCTGAAAACGCCTTCTCTCGGAAACGGAGAAATCTTCTTGCATCTAATCTAATCGCCGGCGGCATATCGAAGCGGCCGATCATTAGTTCACGAGGAAGCTCGTTAGCGTTGGCCGTGTTCATGAGCAGTTCTGAAAGGAAAAGCGGCGACGTCCTGAATTCGAGATTGTCTCCGACGATTCGTCCTCCATTGCACCCCAACGGACGAGCATCTCGTAGCAATTCAGGTTCCGCAGTTCCTCTTCTCTGTAAATTTCCCACTTGGCGATCATACTCCTTGGCCAATATACAGTAGCGTAGGGTAAGAGTTTTCCATGGCCCCATGGAAGCGAATCACCATCAAGACTAACTTGACCTTTCATCAAATCGGCCTCTCCCAAATAACTCGTCCTCGTTCAAATTATCATCGAGCTTAATTCTGCTGCAACTCTGTTTTGTTGTTGTTGTCGTTTTTTTTTTAATTTTTTATTTTATGTAAATTGAAAAGCAAAAAAGAATAGCTGTTTGATCATCGAATCAACGTCTGTTCGTTTATAGAATTTGCATGGAAAATGGAAAGATCTGAGTTTCTTTTTCGGATAAAGTTATAAAGAAAATTACAGATTATTGGGCAAAAACTTGGGCAAATCGGAAACGAATCACGAAGGATTGTCAATGTCCAATCTTTAGAGTACGTGAAGAACATTGAGCCAGTGGACTAAAATGAAAATACAAGTACCAAGAACAATAATTATGGGATCCTAGATTGAACTATCAATTACCAAAATTCTTGATAGAAATATGTTAAAACCAAACCAA

Coding sequence (CDS)

ATGTCAATTGCTTTGGAGAGCAATAGCAGGATTCCGCCGTCCGTTTTCTCGCAAGGTGTCTTGCCGTCGTACTGCTCCGTCTTGAATACGACGGGAGTTATTCCGGTAGTTCGACGAGAGGCTGTTGTTGGTGATGTGGTGGCGCCGGCGGAGGTGGTGGATAGATGTAGTTCGTCTTCATCGTCGTCGATCGGAGAAAATAGTGATTTCTCTGTTAGATCGGTGAATGATGATGATGGAGAGGATAATGAGGCGGAAAGTTCGTATAAAGAATCTCTAGGAATGGAATCGTTGGAGGAAGTTTTGTCTATCAGGAGAGGAATTTCAAATTTCTACAACGGAAAATCGAAATCGTTCACGAGCCTGGGAGACGCTTCCTCTACTTCGTCCATAAAAGACATAGCGAAACCTGAAAACGCCTTCTCTCGGAAACGGAGAAATCTTCTTGCATCTAATCTAATCGCCGGCGGCATATCGAAGCGGCCGATCATTAGTTCACGAGGAAGCTCGTTAGCGTTGGCCGTGTTCATGAGCAGTTCTGAAAGGAAAAGCGGCGACGTCCTGAATTCGAGATTGTCTCCGACGATTCGTCCTCCATTGCACCCCAACGGACGAGCATCTCGTAGCAATTCAGGTTCCGCAGTTCCTCTTCTCTGTAAATTTCCCACTTGGCGATCATACTCCTTGGCCAATATACAGTAG

Protein sequence

MSIALESNSRIPPSVFSQGVLPSYCSVLNTTGVIPVVRREAVVGDVVAPAEVVDRCSSSSSSSIGENSDFSVRSVNDDDGEDNEAESSYKESLGMESLEEVLSIRRGISNFYNGKSKSFTSLGDASSTSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISSRGSSLALAVFMSSSERKSGDVLNSRLSPTIRPPLHPNGRASRSNSGSAVPLLCKFPTWRSYSLANIQ

Homology

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BLAST of CmaCh05G004110 vs. TrEMBL
Match: A0A0A0KFI7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G361410 PE=4 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 8.3e-87
Identity = 189/235 (80.43%), Postives = 202/235 (85.96%), Query Frame = 1


Query: 1   MSIALESNSRIPPSVFSQGVLPSYCSVLNTTGVIPVVRREAVVGDVVAPAEVVDRCSSSS 60
           MSIALE+N+     VFSQ  LPSYCSVLNTTG+IPVVRREA + D VAPA+V DRC+SSS
Sbjct: 1   MSIALETNT-----VFSQPGLPSYCSVLNTTGIIPVVRREAALADAVAPADV-DRCTSSS 60

Query: 61  SSSIGENSDFSVRSVNDDDGEDNEAESSYKESLGMESLEEVLSIRRGISNFYNGKSKSFT 120
           SSSIGENS FSVRS ++DDGEDNEAESSYK  LGMESLEEVL IRRGISNFYNGKSKSFT
Sbjct: 61  SSSIGENSGFSVRSSDNDDGEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFT 120

Query: 121 SLGDASSTSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISSRGSSLALAVFMSSS 180
           SL DASS+SSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISS  SSLALAV +SSS
Sbjct: 121 SLVDASSSSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSS 180

Query: 181 ERKSGDVLNSRLSP--TIRPPLHPNGRASRSNSGSAVPLLCKFPTWRSYSLANIQ 234
           E    + LNS L P   IRPPL+PNGR SR NSGSAVP LCKFPTWRSYS+ANIQ
Sbjct: 181 EIHKNNDLNSILPPPTLIRPPLYPNGRGSRINSGSAVPSLCKFPTWRSYSMANIQ 229

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BLAST of CmaCh05G004110 vs. TrEMBL
Match: A0A0A0L451_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G648530 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.5e-40
Identity = 113/193 (58.55%), Postives = 137/193 (70.98%), Query Frame = 1


Query: 57  SSSSSSSIGENSDFSVRSVNDDDGEDNEAESSYKESLGM-ESLEEVLSIRRGISNFYNGK 116
           S+SSSSSIG NSD   +S ++D+GE++E +SSYK  L M +SLEEVL +R+GIS FY+GK
Sbjct: 59  STSSSSSIGRNSD---QSDDEDNGENDEVQSSYKGPLDMMDSLEEVLPVRKGISKFYSGK 118

Query: 117 SKSFTSLGDASSTSSIKDIAKPENAFSRKRRNLLASNLI------------AGGISKRPI 176
           SKSFTSL DASS +S+K+IAKPENA+S+KRRNL+A NL+             GGISKRPI
Sbjct: 119 SKSFTSLADASSVNSMKEIAKPENAYSKKRRNLMAYNLVWEKNRSFPLKNNGGGISKRPI 178

Query: 177 ISSRGSSLALAVFMSSSERKSGDVLNS---RLSPTIRPPLHPNGRASRSNSGSAVPLLCK 234
            SS+ SSLALAV MSSSE  S +  N      SP  RPPLHP  R S +N  S VP    
Sbjct: 179 SSSK-SSLALAVAMSSSESNSSEDSNCSSYSSSPPPRPPLHPQSRPSNNNFPSMVPPQKT 238

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BLAST of CmaCh05G004110 vs. TrEMBL
Match: W9RF79_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_018609 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.9e-38
Identity = 137/261 (52.49%), Postives = 161/261 (61.69%), Query Frame = 1


Query: 1   MSIALESNSRIPPSVFSQGVLPSYCSVLNTTGVIPVVRREAVVGDVVAPAEV-------- 60
           MSIAL++N R+   + S G++     V ++    PV  R A  GD     E         
Sbjct: 1   MSIALDNNRRM--DMKSSGIMRGL--VFDS----PVEGRIAGAGDSDTVKESNACNNETS 60

Query: 61  ---VDRCSSSSSSSIGENSDFSVRSVND-DDGEDNEAESSYKESLGM-ESLEEVLSIRRG 120
                  +S+SSSSIG+NSD SVRS +D DD E+NEA+SSYK  L M E+LEEVL IRRG
Sbjct: 61  SASASASASASSSSIGKNSDLSVRSSSDGDDCEENEAQSSYKGPLEMMEALEEVLPIRRG 120

Query: 121 ISNFYNGKSKSFTSLGDASSTSSIKDIAKPENAFSRKRRNLLASNLI------------- 180
           IS FYNGKSKSFTSLGDA+STSSIKDI KPENA++RKRRNL+A N +             
Sbjct: 121 ISKFYNGKSKSFTSLGDAASTSSIKDITKPENAYTRKRRNLMAFNHVWDNKNRSFPLRSN 180

Query: 181 AGGISKRPIISSRGSSLALAVFMSSSERKS--GDVLNSRLSPTIRPPLHPNGRASRSNSG 234
            GGISKRPI SSR SSLALA+ MSSSE  S   D  +SR SP   PPLHP  RAS     
Sbjct: 181 GGGISKRPISSSR-SSLALAMAMSSSESSSSTSDDSSSR-SPPPLPPLHPQARASFHVKS 240

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BLAST of CmaCh05G004110 vs. TrEMBL
Match: A5B5R8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g02000 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 2.3e-36
Identity = 124/258 (48.06%), Postives = 161/258 (62.40%), Query Frame = 1


Query: 1   MSIALE-SNSRIPPSVFSQGVLPSYCSVLNTTGVIPVVRREAVVGDVVAPAEV----VDR 60
           MSIAL+ S++RI  S F  G+  S  S+  +  ++   RR    G++ A AE     +D 
Sbjct: 1   MSIALDRSSNRIEGSGFMHGM--SCISIFESPELLTGDRRFPAGGEMAAKAEEREEELDS 60

Query: 61  CSSSSSSSIGENSDFSVRSVNDDDGEDNEAESSYKESL-GMESLEEVLSIRRGISNFYNG 120
           CSSSSS  IG+NSD S  S + +D  + E +SSYK  L  M +LEEVL +RRGIS FYNG
Sbjct: 61  CSSSSS--IGKNSDVSGMSSDQEDSGETEVQSSYKRPLDSMNALEEVLPLRRGISRFYNG 120

Query: 121 KSKSFTSLGDASSTSSIKDIAKPENAFSRKRRNLLASNLI------------AGGISKRP 180
           KSKSFTSL DAS+++S KD+AKPENA++R+RRNLLA N +             GGISK+ 
Sbjct: 121 KSKSFTSLADASTSASCKDLAKPENAYNRRRRNLLAYNHVLDKNRNFPLRSNGGGISKKL 180

Query: 181 IISSRGSSLALAVFMSSSE-RKSGDVLNSRL-----SPT-IRPPLHPNGRASRSNSGSAV 234
             +SR S+LALAV MSSS+   S + LNS L     SP+ + PPLHP  R   +N  S+ 
Sbjct: 181 AATSR-STLALAVAMSSSDSNNSSEDLNSSLNCISRSPSLLLPPLHPQARLYHNNVSSSP 240

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BLAST of CmaCh05G004110 vs. TrEMBL
Match: A9PBN9_POPTR (MTD1 family protein OS=Populus trichocarpa GN=POPTR_0006s23640g PE=2 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 3.0e-36
Identity = 110/201 (54.73%), Postives = 136/201 (67.66%), Query Frame = 1


Query: 51  EVVDRCS-----SSSSSSIGENSDFSVRSVNDDDGEDNEAESSYKESL-GMESLEEVLSI 110
           E+ + CS     +SSSSSIG+NSD +     +D  E+NE +S+YK +L  ME+LEEVL I
Sbjct: 28  EMAEECSPSSSTTSSSSSIGKNSDLT--DGGEDGLEENEVQSAYKGTLDSMEALEEVLPI 87

Query: 111 RRGISNFYNGKSKSFTSLGDASSTSSIKDIAKPENAFSRKRRNLLASNLI---------A 170
           RRGISNFYNGKSKSFTSL DASS+ SIKDIAKPENA++RKRRNLLA + +          
Sbjct: 88  RRGISNFYNGKSKSFTSLSDASSSPSIKDIAKPENAYTRKRRNLLAFSHVWEKTRSFPYR 147

Query: 171 GGISKRPIISSRGSSLALAVFMSSSE---RKSGDVLNSRLSPTIRPPLHPNGRASRSNSG 230
            GI+KRPI +S+ S+LALAV MSSSE     S D  ++  SP   PPLHP  RAS +N  
Sbjct: 148 SGIAKRPISNSK-STLALAVAMSSSESISSASEDSTSTSKSPPNLPPLHPRSRASHNNLT 207

Query: 231 SAVPLLCKFPTWRSYSLANIQ 234
           S       F  WRS+SLA++Q
Sbjct: 208 SLPSPRQNFSPWRSFSLADLQ 225

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BLAST of CmaCh05G004110 vs. TAIR10
Match: AT5G21940.1 (AT5G21940.1 unknown protein)

HSP 1 Score: 112.5 bits (280), Expect = 3.6e-25
Identity = 91/221 (41.18%), Postives = 123/221 (55.66%), Query Frame = 1


Query: 48  APAEVVDRCSSSSSSSIGENSDFSVRSVND--DDGEDNEAESSYKESLGM-ESLEEVLSI 107
           +P++     SSS+SSSIG NSD   +S  D  DD  +NE ES YK  L M ESLE+VL +
Sbjct: 28  SPSDSSSSPSSSASSSIGRNSDDGEKSSEDGGDDAGENEVESPYKGPLEMMESLEQVLPV 87

Query: 108 RRGISNFYNGKSKSFTSL-----GDASSTSSIKDIAKPENAFSRKRRNLLASNL------ 167
           R+GIS +Y+GKSKSFT+L        +S+SS+KD+AKPEN +SR+RRNLL   +      
Sbjct: 88  RKGISKYYSGKSKSFTNLTAEAASALTSSSSMKDLAKPENPYSRRRRNLLCHQIWENNKT 147

Query: 168 -IAGGISKRPIISSRGSSLALAV-----FMSSSERKSGDVLNSRLSPTIR---------- 227
              GGISK+ ++SS  S+L LA+      M+     SG   +   SPT            
Sbjct: 148 TPRGGISKKHVMSSSRSALTLAMAVAAGVMTGEGSSSGGDSSPGSSPTTSGSPPRQLHHH 207

Query: 228 -------PPLHPNGRASRSNSGSAVPLLCKFPTWRSYSLAN 232
                  PPL+P  + S  N  S+   L  F  WRS+S+A+
Sbjct: 208 QHQMKKLPPLYPRSQGSFGNLTSSQSSL-GFCAWRSFSVAD 247

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BLAST of CmaCh05G004110 vs. TAIR10
Match: AT3G43850.1 (AT3G43850.1 unknown protein)

HSP 1 Score: 96.7 bits (239), Expect = 2.1e-20
Identity = 72/143 (50.35%), Postives = 88/143 (61.54%), Query Frame = 1


Query: 57  SSSSSSSIGENSDFSVRSVNDDDGEDNEAESSYKESLGM-ESLEEVLSIRRGISNFYNGK 116
           SS+SS SIGENSD       DD+G +NE ESSY   L M ESLEE L I+R IS FY GK
Sbjct: 23  SSTSSDSIGENSD-------DDEGGENEIESSYNGPLDMMESLEEALPIKRAISKFYKGK 82

Query: 117 SKSFTSLGDASSTSSIKDIAKPENAFSRKRRNLLASNLIA-GGISKRPIISSRGSSLALA 176
           SKSF SL + SS   +KD+ KPEN +SR+RRNLL+  + + GGISK+P      S LA++
Sbjct: 83  SKSFMSLSETSSL-PVKDLTKPENLYSRRRRNLLSHRICSRGGISKKPF----KSVLAMS 142

Query: 177 VFMSSSERKSGDVLNSRLSPTIR 198
                S     D L     PT+R
Sbjct: 143 QREGDSSSSGDDSL-----PTLR 148

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BLAST of CmaCh05G004110 vs. TAIR10
Match: AT2G24550.1 (AT2G24550.1 unknown protein)

HSP 1 Score: 60.5 bits (145), Expect = 1.6e-09
Identity = 46/105 (43.81%), Postives = 70/105 (66.67%), Query Frame = 1


Query: 57  SSSSSSSIGENSDFSVRSVNDDDGEDNEAESSYKESLGM--ESLEEVLSIRRGISNFYNG 116
           SS SSSSIGE+S+      N+++ E+++A S  + +L     SLE+ L I+RG+SN Y G
Sbjct: 64  SSDSSSSIGESSE------NEEEEEEDDAVSCQRGTLDSFSSSLEDSLPIKRGLSNHYVG 123

Query: 117 KSKSFTSLGDASSTSSIKDIAKPENAFSRKRRNLLASNLIAGGIS 160
           KSKSF +L +A+S +  KD+ K EN F+++RR ++A+ L   G S
Sbjct: 124 KSKSFGNLMEAASKA--KDLEKVENPFNKRRRLVIANKLRRRGRS 160

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BLAST of CmaCh05G004110 vs. TAIR10
Match: AT5G24890.1 (AT5G24890.1 unknown protein)

HSP 1 Score: 55.5 bits (132), Expect = 5.2e-08
Identity = 41/102 (40.20%), Postives = 59/102 (57.84%), Query Frame = 1


Query: 58  SSSSSSIGENSDFSVRSVNDDDGEDNEAESSYKESLG------MESLEEVLSIRRGISNF 117
           SS SSSIG   D    S  D++  +NE +    + LG      M SLE+ L  +RG+SN 
Sbjct: 59  SSDSSSIGTPGD----SEEDEEESENENDDVSSKELGLRGLASMSSLEDSLPSKRGLSNH 118

Query: 118 YNGKSKSFTSLGDASSTSSIKDIAKPENAFSRKRRNLLASNL 154
           Y GKSKSF +LG+     S+K++AK EN  +++RR  + + L
Sbjct: 119 YKGKSKSFGNLGE---IGSVKEVAKQENPLNKRRRLQICNKL 153

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BLAST of CmaCh05G004110 vs. TAIR10
Match: AT4G31510.1 (AT4G31510.1 unknown protein)

HSP 1 Score: 52.0 bits (123), Expect = 5.8e-07
Identity = 49/127 (38.58%), Postives = 70/127 (55.12%), Query Frame = 1


Query: 38  RREAVVGDVVAPAEV-----VDRCSSS----SSSSIGENSDFSVRSVNDDDGEDNEAESS 97
           R      D   PA +     + RC  S    SSSS+GE S+      N++D ED+   SS
Sbjct: 12  RSSVTTHDQAVPASLSSRIGLRRCGRSPPPESSSSVGETSE------NEED-EDDAVSSS 71

Query: 98  YKESLGM--ESLEEVLSIRRGISNFYNGKSKSFTSLGDASSTSSIKDIAKPENAFSRKRR 154
               L     SLE+ L I+RG+SN Y GKSKSF +L +AS+T+   D+ K E+  +++RR
Sbjct: 72  QGRWLNSFSSSLEDSLPIKRGLSNHYIGKSKSFGNLMEASNTN---DLVKVESPLNKRRR 128

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BLAST of CmaCh05G004110 vs. NCBI nr
Match: gi|659089501|ref|XP_008445543.1| (PREDICTED: uncharacterized protein LOC103488525 [Cucumis melo])

HSP 1 Score: 347.8 bits (891), Expect = 1.4e-92
Identity = 195/235 (82.98%), Postives = 206/235 (87.66%), Query Frame = 1


Query: 1   MSIALESNSRIPPSVFSQGVLPSYCSVLNTTGVIPVVRREAVVGDVVAPAEVVDRCSSSS 60
           MSIALESN+RIPPSVFSQ  LP YCSVLNTTG+IPVVRREA V D VAP E VDRCSSSS
Sbjct: 36  MSIALESNTRIPPSVFSQAGLPPYCSVLNTTGIIPVVRREAAVADAVAP-EDVDRCSSSS 95

Query: 61  SSSIGENSDFSVRSVNDDDGEDNEAESSYKESLGMESLEEVLSIRRGISNFYNGKSKSFT 120
           SSSIGENS FSVRS ++DDGEDNEAESSY+  LGMESLEEVL IRRGISNFYNGKSKSFT
Sbjct: 96  SSSIGENSGFSVRSSDNDDGEDNEAESSYRGPLGMESLEEVLPIRRGISNFYNGKSKSFT 155

Query: 121 SLGDASSTSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISSRGSSLALAVFMSSS 180
           SL DASS+SSIK+IAKPENAFSRKRRNLLASNLIAGGISKRPIISS  SSLALAV +SSS
Sbjct: 156 SLADASSSSSIKEIAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSS 215

Query: 181 ERKSGDVLNSRLSP--TIRPPLHPNGRASRSNSGSAVPLLCKFPTWRSYSLANIQ 234
           E    + LNS + P   IRPPLHPNGRASR NSGSAVP LCKFPTWRSYS+ANIQ
Sbjct: 216 ESHKNNDLNSIIPPPTPIRPPLHPNGRASRINSGSAVPSLCKFPTWRSYSMANIQ 269

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BLAST of CmaCh05G004110 vs. NCBI nr
Match: gi|449452937|ref|XP_004144215.1| (PREDICTED: uncharacterized protein LOC101211014 [Cucumis sativus])

HSP 1 Score: 328.2 bits (840), Expect = 1.2e-86
Identity = 189/235 (80.43%), Postives = 202/235 (85.96%), Query Frame = 1


Query: 1   MSIALESNSRIPPSVFSQGVLPSYCSVLNTTGVIPVVRREAVVGDVVAPAEVVDRCSSSS 60
           MSIALE+N+     VFSQ  LPSYCSVLNTTG+IPVVRREA + D VAPA+V DRC+SSS
Sbjct: 1   MSIALETNT-----VFSQPGLPSYCSVLNTTGIIPVVRREAALADAVAPADV-DRCTSSS 60

Query: 61  SSSIGENSDFSVRSVNDDDGEDNEAESSYKESLGMESLEEVLSIRRGISNFYNGKSKSFT 120
           SSSIGENS FSVRS ++DDGEDNEAESSYK  LGMESLEEVL IRRGISNFYNGKSKSFT
Sbjct: 61  SSSIGENSGFSVRSSDNDDGEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFT 120

Query: 121 SLGDASSTSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISSRGSSLALAVFMSSS 180
           SL DASS+SSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISS  SSLALAV +SSS
Sbjct: 121 SLVDASSSSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSS 180

Query: 181 ERKSGDVLNSRLSP--TIRPPLHPNGRASRSNSGSAVPLLCKFPTWRSYSLANIQ 234
           E    + LNS L P   IRPPL+PNGR SR NSGSAVP LCKFPTWRSYS+ANIQ
Sbjct: 181 EIHKNNDLNSILPPPTLIRPPLYPNGRGSRINSGSAVPSLCKFPTWRSYSMANIQ 229

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BLAST of CmaCh05G004110 vs. NCBI nr
Match: gi|659104048|ref|XP_008452790.1| (PREDICTED: uncharacterized protein DDB_G0271670 [Cucumis melo])

HSP 1 Score: 176.4 bits (446), Expect = 5.8e-41
Identity = 114/193 (59.07%), Postives = 138/193 (71.50%), Query Frame = 1


Query: 57  SSSSSSSIGENSDFSVRSVNDDDGEDNEAESSYKESLGM-ESLEEVLSIRRGISNFYNGK 116
           S+SSSSSIG NSD   +S ++D+GE++E +SSYK  L M +SLEEVL +R+GIS FY+GK
Sbjct: 60  STSSSSSIGRNSD---QSDDEDNGENDEVQSSYKGPLDMMDSLEEVLPVRKGISKFYSGK 119

Query: 117 SKSFTSLGDASSTSSIKDIAKPENAFSRKRRNLLASNLI------------AGGISKRPI 176
           SKSFTSL DASS +S+K+IAKPENA+S+KRRNL+A NL+             GGISKRPI
Sbjct: 120 SKSFTSLADASSVNSMKEIAKPENAYSKKRRNLMAYNLVWEKNRSFPLKNNGGGISKRPI 179

Query: 177 ISSRGSSLALAVFMSSSERKSGDVLNS---RLSPTIRPPLHPNGRASRSNSGSAVPLLCK 234
            SS+ SSLALAV MSSSE  S +  NS     SP  RPPLHP  R S +N  S VP    
Sbjct: 180 SSSK-SSLALAVAMSSSESNSSEDSNSSSYSSSPPPRPPLHPQSRPSNNNFPSMVPPQKT 239

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BLAST of CmaCh05G004110 vs. NCBI nr
Match: gi|449447177|ref|XP_004141345.1| (PREDICTED: vitellogenin-2-like [Cucumis sativus])

HSP 1 Score: 174.5 bits (441), Expect = 2.2e-40
Identity = 113/193 (58.55%), Postives = 137/193 (70.98%), Query Frame = 1


Query: 57  SSSSSSSIGENSDFSVRSVNDDDGEDNEAESSYKESLGM-ESLEEVLSIRRGISNFYNGK 116
           S+SSSSSIG NSD   +S ++D+GE++E +SSYK  L M +SLEEVL +R+GIS FY+GK
Sbjct: 59  STSSSSSIGRNSD---QSDDEDNGENDEVQSSYKGPLDMMDSLEEVLPVRKGISKFYSGK 118

Query: 117 SKSFTSLGDASSTSSIKDIAKPENAFSRKRRNLLASNLI------------AGGISKRPI 176
           SKSFTSL DASS +S+K+IAKPENA+S+KRRNL+A NL+             GGISKRPI
Sbjct: 119 SKSFTSLADASSVNSMKEIAKPENAYSKKRRNLMAYNLVWEKNRSFPLKNNGGGISKRPI 178

Query: 177 ISSRGSSLALAVFMSSSERKSGDVLNS---RLSPTIRPPLHPNGRASRSNSGSAVPLLCK 234
            SS+ SSLALAV MSSSE  S +  N      SP  RPPLHP  R S +N  S VP    
Sbjct: 179 SSSK-SSLALAVAMSSSESNSSEDSNCSSYSSSPPPRPPLHPQSRPSNNNFPSMVPPQKT 238

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BLAST of CmaCh05G004110 vs. NCBI nr
Match: gi|703105965|ref|XP_010098377.1| (hypothetical protein L484_018609 [Morus notabilis])

HSP 1 Score: 167.5 bits (423), Expect = 2.7e-38
Identity = 137/261 (52.49%), Postives = 161/261 (61.69%), Query Frame = 1


Query: 1   MSIALESNSRIPPSVFSQGVLPSYCSVLNTTGVIPVVRREAVVGDVVAPAEV-------- 60
           MSIAL++N R+   + S G++     V ++    PV  R A  GD     E         
Sbjct: 1   MSIALDNNRRM--DMKSSGIMRGL--VFDS----PVEGRIAGAGDSDTVKESNACNNETS 60

Query: 61  ---VDRCSSSSSSSIGENSDFSVRSVND-DDGEDNEAESSYKESLGM-ESLEEVLSIRRG 120
                  +S+SSSSIG+NSD SVRS +D DD E+NEA+SSYK  L M E+LEEVL IRRG
Sbjct: 61  SASASASASASSSSIGKNSDLSVRSSSDGDDCEENEAQSSYKGPLEMMEALEEVLPIRRG 120

Query: 121 ISNFYNGKSKSFTSLGDASSTSSIKDIAKPENAFSRKRRNLLASNLI------------- 180
           IS FYNGKSKSFTSLGDA+STSSIKDI KPENA++RKRRNL+A N +             
Sbjct: 121 ISKFYNGKSKSFTSLGDAASTSSIKDITKPENAYTRKRRNLMAFNHVWDNKNRSFPLRSN 180

Query: 181 AGGISKRPIISSRGSSLALAVFMSSSERKS--GDVLNSRLSPTIRPPLHPNGRASRSNSG 234
            GGISKRPI SSR SSLALA+ MSSSE  S   D  +SR SP   PPLHP  RAS     
Sbjct: 181 GGGISKRPISSSR-SSLALAMAMSSSESSSSTSDDSSSR-SPPPLPPLHPQARASFHVKS 240

The following BLAST results are available for this feature:

BLAST of CmaCh05G004110 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh05G004110 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KFI7_CUCSA	8.3e-87	80.43	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G361410 PE=4 SV=1	[more]
A0A0A0L451_CUCSA	1.5e-40	58.55	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G648530 PE=4 SV=1	[more]
W9RF79_9ROSA	1.9e-38	52.49	Uncharacterized protein OS=Morus notabilis GN=L484_018609 PE=4 SV=1	[more]
A5B5R8_VITVI	2.3e-36	48.06	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g02000 PE=4 SV=...	[more]
A9PBN9_POPTR	3.0e-36	54.73	MTD1 family protein OS=Populus trichocarpa GN=POPTR_0006s23640g PE=2 SV=1	[more]

BLAST of CmaCh05G004110 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G21940.1	3.6e-25	41.18	unknown protein	[more]
AT3G43850.1	2.1e-20	50.35	unknown protein	[more]
AT2G24550.1	1.6e-09	43.81	unknown protein	[more]
AT5G24890.1	5.2e-08	40.20	unknown protein	[more]
AT4G31510.1	5.8e-07	38.58	unknown protein	[more]

BLAST of CmaCh05G004110 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659089501\|ref\|XP_008445543.1\|	1.4e-92	82.98	PREDICTED: uncharacterized protein LOC103488525 [Cucumis melo]	[more]
gi\|449452937\|ref\|XP_004144215.1\|	1.2e-86	80.43	PREDICTED: uncharacterized protein LOC101211014 [Cucumis sativus]	[more]
gi\|659104048\|ref\|XP_008452790.1\|	5.8e-41	59.07	PREDICTED: uncharacterized protein DDB_G0271670 [Cucumis melo]	[more]
gi\|449447177\|ref\|XP_004141345.1\|	2.2e-40	58.55	PREDICTED: vitellogenin-2-like [Cucumis sativus]	[more]
gi\|703105965\|ref\|XP_010098377.1\|	2.7e-38	52.49	hypothetical protein L484_018609 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh05G004110.1	CmaCh05G004110.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33172	FAMILY NOT NAMED	coord: 54..233 score: 1.3
None	No IPR available	PANTHER	PTHR33172:SF6	SUBFAMILY NOT NAMED	coord: 54..233 score: 1.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh05G004110	Cucsa.055990	Cucumber (Gy14) v1	cgycmaB0074
CmaCh05G004110	Cla021964	Watermelon (97103) v1	cmawmB751
CmaCh05G004110	Csa6G361410	Cucumber (Chinese Long) v2	cmacuB805
CmaCh05G004110	MELO3C011491	Melon (DHL92) v3.5.1	cmameB724
CmaCh05G004110	ClCG08G009780	Watermelon (Charleston Gray)	cmawcgB709
CmaCh05G004110	CSPI06G19030	Wild cucumber (PI 183967)	cmacpiB816
CmaCh05G004110	CmoCh05G004230	Cucurbita moschata (Rifu)	cmacmoB786
CmaCh05G004110	CmoCh12G002490	Cucurbita moschata (Rifu)	cmacmoB770
CmaCh05G004110	Lsi08G008290	Bottle gourd (USVL1VR-Ls)	cmalsiB737
CmaCh05G004110	Cp4.1LG11g03510	Cucurbita pepo (Zucchini)	cmacpeB766
CmaCh05G004110	MELO3C011491.2	Melon (DHL92) v3.6.1	cmamedB817
CmaCh05G004110	CsaV3_6G031910	Cucumber (Chinese Long) v3	cmacucB0950
CmaCh05G004110	Cla97C08G152580	Watermelon (97103) v2	cmawmbB830
CmaCh05G004110	Bhi04G001194	Wax gourd	cmawgoB0947
CmaCh05G004110	Bhi04G000878	Wax gourd	cmawgoB0940
CmaCh05G004110	CsGy6G018470	Cucumber (Gy14) v2	cgybcmaB844
CmaCh05G004110	Carg09313	Silver-seed gourd	carcmaB0189
CmaCh05G004110	Carg03887	Silver-seed gourd	carcmaB1357

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh05G004110	CmaCh12G002970	Cucurbita maxima (Rimu)	cmacmaB199

The following block(s) are covering this gene:

None